Pregenerated sensors for VMN1R204 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094637

Ensembl transcript IDs: ENSMUST00000091728.2, ENSMUST00000228195.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CGTGCCTGGGAGAGCGCTAGCAAGCAAGCACAAGTCTGCAAGAGATaGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGT	+
Preference number: 1 (lower is better) Translates to: RAWESASKQAQVCKR*RKQNLKFPDGPSAC Trigger: ACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCTCTTGCAGACTTGTGCTTGCTTGCTAGCGCTCTCCCAGGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
3UTR-3UTR CCA 90 bp	AGATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCTGTAGGATCGTAGGATaGGGAGCATCCCTGCCCACT	+
Preference number: 2 (lower is better) Translates to: RWRKQNLKFPDGPSACTPCRIVG*GASLPT Trigger: AGTGGGCAGGGATGCTCCCCATCCTACGATCCTACA...GGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
3UTR-3UTR GCA 90 bp	CACAAGTCTGCAAGAGATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCTTTCCAGATATCCCTaGTTCCAGTTGAGAACCCTG	+
Preference number: 2 (lower is better) Translates to: HKSARDGESRTSSFQMAHLSRYP*FQLRTL Trigger: CAGGGTTCTCAACTGGAAGCAGGGATATCTGGAAAG...ATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCTCTTGCAGACTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
3UTR GCA 72 bp	GTCCTGTGTATTCCTTATGCACTTTCCAGATATCCCTaGTTCCAGTTGAGAACCCTGATCATGTGTCCAGGC	+
Preference number: 3 (lower is better) Translates to: VLCIPYALSRYP*FQLRTLIMCPG Trigger: GCCTGGACACATGATCAGGGTTCTCAACTGGAAGCAGGGATATCTGGAAAGTGCATAAGGAATACACAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR GCA 90 bp	AGATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCTGGCCTGGCATTGTTTaGAGACCTGGAGCTGTGGAG	+
Preference number: 4 (lower is better) Translates to: RWRKQNLKFPDGPSACTPWPGIV*RPGAVE Trigger: CTCCACAGCTCCAGGTCTGCAAACAATGCCAGGCCA...GGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR TCA 90 bp	ATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCGCTGCTACTGCCTGCTGTaGTATAGTGAAGCAAATTGG	+
Preference number: 4 (lower is better) Translates to: MEKAEPQVSRWPISLYPRCYCLL*YSEANW Trigger: CCAATTTGCTTCACTATATCACAGCAGGCAGTAGCA...GCGGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR TCA 90 bp	AAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCGCCCCAAACACCCAGGAAGTTTCTaGTGTAAAAACTTGTGGCTA	+
Preference number: 4 (lower is better) Translates to: KAEPQVSRWPISLYPRPKHPGSF*CKNLWL Trigger: TAGCCACAAGTTTTTACATCAGAAACTTCCTGGGTG...TTTGGGGCGGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CCA 90 bp	AAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCGCCCCAAAAAGTCATGTGTCACTGTaGAACCTATGTATAAGGAGA	+
Preference number: 4 (lower is better) Translates to: KQNLKFPDGPSACTPAPKSHVSL*NLCIRR Trigger: TCTCCTTATACATAGGTTCCACAGTGACACATGACT...TTTTGGGGCGGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CCA 90 bp	TGCTATGATACATTAGAAAGGCAAAGCACAGCAATGCCAGTGTTTATAGCTTTTATGCCATGCCGTCTGTaGTTTGAACTTTCTCCACAG	+
Preference number: 4 (lower is better) Translates to: CYDTLERQSTAMPVFIAFMPCRL*FELSPQ Trigger: CTGTGGAGAAAGTTCAAACCACAGACGGCATGGCAT...AAAAGCTATAAACACTGGCATTGCTGTGCTTTGCCTTTCTAATGTATCATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CCA 90 bp	TTAAGGATTAACATGATTCTTTCTAACCACTGTATGACACTTTTGCCCATGTTGCATTGTTTGCAGACCTaGAGCTGTGGAGGTAGAGGA	+
Preference number: 4 (lower is better) Translates to: LRINMILSNHCMTLLPMLHCLQT*SCGGRG Trigger: TCCTCTACCTCCACAGCTCCAGGTCTGCAAACAATG...CAACATGGGCAAAAGTGTCATACAGTGGTTAGAAAGAATCATGTTAATCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CCA 90 bp	TGCTATGATACATTAGAAAGGCAAAGCACAGCAATGCCAGTGTTTATAGCTTTTTGTAGCTCTGATTTCTaGCCTGGCATTGTTTGCAGA	+
Preference number: 4 (lower is better) Translates to: CYDTLERQSTAMPVFIAFCSSDF*PGIVCR Trigger: TCTGCAAACAATGCCAGGCCAGAAATCAGAGCTACA...AAAAGCTATAAACACTGGCATTGCTGTGCTTTGCCTTTCTAATGTATCATAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CAA 90 bp	AGATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCCTGGCCTGGCATTGTTaGCAGACCTGGAGCTGTGGA	+
Preference number: 5 (lower is better) Translates to: RWRKQNLKFPDGPSACTPLAWHC*QTWSCG Trigger: TCCACAGCTCCAGGTCTGCAAACAATGCCAGGCCAG...GGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CAA 90 bp	ATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGTACCCCCGCATTTCTGGCCTGGCATaGTTTGCAGACCTGGAGCTG	+
Preference number: 5 (lower is better) Translates to: MEKAEPQVSRWPISLYPRISGLA*FADLEL Trigger: CAGCTCCAGGTCTGCAAACAATGCCAGGCCAGAAAT...GCGGGGGTACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS-3UTR CAA 90 bp	CACAAGTCTGCAAGAGATGGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCCAGCCCATGAGACTTaGGAAAATGACATCACGAAA	+
Preference number: 5 (lower is better) Translates to: HKSARDGESRTSSFQMAHPAHET*ENDITK Trigger: TTTCGTGATGTCATTTTCCAAAGTCTCATGGGCTGG...ATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCTCTTGCAGACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228195.2
CDS CCA 90 bp	AAAAGCCATGAAAGAAAGGAACAGCCATTTAACTATGTTCCTGGATaGCAGCATATAGCAATACACAGTAAACATCCCAACTTCAGAACT	+
Preference number: 5 (lower is better) Translates to: KSHERKEQPFNYVPG*QHIAIHSKHPNFRT Trigger: AGTTCTGAAGTTGGGATGTTTACTGTGTATTGCTATATGCTGCCATCCAGGAACATAGTTAAATGGCTGTTCCTTTCTTTCATGGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091728.2 ENSMUST00000228195.2
CDS CCA 72 bp	CATGAGAGTGAGAACTCTCTGTGTAGCTCTGATTTCTaGCCTGGCATTGTTTGCAGACCTGGAGCTGTGGAG	+
Preference number: 6 (lower is better) Translates to: HESENSLCSSDF*PGIVCRPGAVE Trigger: CTCCACAGCTCCAGGTCTGCAAACAATGCCAGGCCAGAAATCAGAGCTACACAGAGAGTTCTCACTCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091728.2 ENSMUST00000228195.2
CDS CAA 72 bp	AGGAGAAAGGCAAGAATATGCCATGCCGTCTGTGGTTaGAACTTTCTCCACAGTGTGGTCCTGGGACTGATG	+
Preference number: 6 (lower is better) Translates to: RRKARICHAVCG*NFLHSVVLGLM Trigger: CATCAGTCCCAGGACCACACTGTGGAGAAAGTTCAAACCACAGACGGCATGGCATATTCTTGCCTTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091728.2 ENSMUST00000228195.2
CDS CCA 72 bp	GAAAGAAAGGAACAGCCATTTAACTATGTTCCTGGATaGCAGCATATAGCAATACACAGTAAACATCCCAAC	+
Preference number: 6 (lower is better) Translates to: ERKEQPFNYVPG*QHIAIHSKHPN Trigger: GTTGGGATGTTTACTGTGTATTGCTATATGCTGCCATCCAGGAACATAGTTAAATGGCTGTTCCTTTCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091728.2 ENSMUST00000228195.2