Pregenerated sensors for VMN1R203 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069289Ensembl transcript IDs: ENSMUST00000091729.2, ENSMUST00000227520.2, ENSMUST00000228889.2
Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGAAGGGCAGGGATAGATCTCCTGAGTCTGGTGACTGGCAAGAGGTaGGGGCAGCTCTGCCACTGCATGCAAAGGGTAGGGCAAGCTCAG | + |
Preference number: 1 (lower is better) Translates to: RRAGIDLLSLVTGKR*GQLCHCMQRVGQAQ Trigger: CTGAGCTTGCCCTACCCTTTGCATGCAGTGGCAGAGCTGCCCCCACCTCTTGCCAGTCACCAGACTCAGGAGATCTATCCCTGCCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | ACTTGTTCCAAGGGCCAGCGTTCCCACATTGCTCAGGTGAGGGGTTaGGACAGCTCTCTGGTGCACTCTTCCTCTGCGCTAGCTCTCCCT | + |
Preference number: 1 (lower is better) Translates to: TCSKGQRSHIAQVRG*DSSLVHSSSALALP Trigger: AGGGAGAGCTAGCGCAGAGGAAGAGTGCACCAGAGAGCTGTCCCAACCCCTCACCTGAGCAATGTGGGAACGCTGGCCCTTGGAACAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | ACTGAGGCTGCACCTTCACCAATGGCCTTCCATGGCCTCTCACAGTaGCGAGCCTCAGCTGCTCTTTGTGACCCCTTCATGCCTTCAAAA | + |
Preference number: 1 (lower is better) Translates to: TEAAPSPMAFHGLSQ*RASAALCDPFMPSK Trigger: TTTTGAAGGCATGAAGGGGTCACAAAGAGCAGCTGAGGCTCGGCACTGTGAGAGGCCATGGAAGGCCATTGGTGAAGGTGCAGCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | ATCTCTTCCTGTGTTCCCATGACATTCAAGGACATGAGCTGTGCCTaGGCCCAGCCTGACCCCCAAGGCTGTCAAGGAGGATCGATGTTC | + |
Preference number: 1 (lower is better) Translates to: ISSCVPMTFKDMSCA*AQPDPQGCQGGSMF Trigger: GAACATCGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTCAGGCACAGCTCATGTCCTTGAATGTCATGGGAACACAGGAAGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | GGACAGCTCTCTGGTGCACTCTTCCTCTGCGCTAGCTCTCCCTCCTaGAGGAGGTGGAAGTGGGTGATTATGGAGGTATTTCTCCTACAT | + |
Preference number: 1 (lower is better) Translates to: GQLSGALFLCASSPS*RRWKWVIMEVFLLH Trigger: ATGTAGGAGAAATACCTCCATAATCACCCACTTCCACCTCCTGCAGGAGGGAGAGCTAGCGCAGAGGAAGAGTGCACCAGAGAGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | GCCTCTCACAGTGCCGAGCCTCAGCTGCTCTTTGTGACCCCTTCATaGCTTCAAAACCAGCACCACCTGGGTGACTCTTACACATTACCA | + |
Preference number: 1 (lower is better) Translates to: ASHSAEPQLLFVTPS*LQNQHHLGDSYTLP Trigger: TGGTAATGTGTAAGAGTCACCCAGGTGGTGCTGGTTTTGAAGGCATGAAGGGGTCACAAAGAGCAGCTGAGGCTCGGCACTGTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TCTGGTGCACTCTTCCTCTGCGCTAGCTCTCCCTCCTGCAGGAGGTaGAAGTGGGTGATTATGGAGGTATTTCTCCTACATCCATGCCAC | + |
Preference number: 1 (lower is better) Translates to: SGALFLCASSPSCRR*KWVIMEVFLLHPCH Trigger: GTGGCATGGATGTAGGAGAAATACCTCCATAATCACCCACTTCCACCTCCTGCAGGAGGGAGAGCTAGCGCAGAGGAAGAGTGCACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TTACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTaGGAGCATGGCAGCATCCAGGCTGTCATGGCACAGGCAGAGTTG | + |
Preference number: 1 (lower is better) Translates to: LLGAGLQVHSPLSSR*EHGSIQAVMAQAEL Trigger: CAACTCTGCCTGTGCCATGACAGCCTGGATGCTGCCATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | ATGTCTGGGATCCAACTCACGATCTTCTGGGCTCCTTCAAGGGCTTaGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGTCATCC | + |
Preference number: 1 (lower is better) Translates to: MSGIQLTIFWAPSRA*VTSPAMPFVAHASS Trigger: GGATGACGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGAAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | TGTTCCCATGACATTCAAGGACATGAGCTGTGCCTGAGCCCAGCCTaGCCCCCAAGGCTGTCAAGGAGGATCGATGTTCCAGAGATAAGA | + |
Preference number: 1 (lower is better) Translates to: CSHDIQGHELCLSPA*PPRLSRRIDVPEIR Trigger: TCTTATCTCTGGAACATCGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTCAGGCACAGCTCATGTCCTTGAATGTCATGGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | GAGCTCCTTTGTGCGACAGAGCTGCATGAAGCTGTGGAGAGCACCTaGATATTAACAAAGGGCAGCTGCAAAGCAGGCTTGCTTGGCTTC | + |
Preference number: 1 (lower is better) Translates to: ELLCATELHEAVEST*ILTKGSCKAGLLGF Trigger: GAAGCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGTGCTCTCCACAGCTTCATGCAGCTCTGTCGCACAAAGGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | CGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTCTTaGAGAGGACTCTGGTTCCTTACCCTACACCTATATCATAGGATG | + |
Preference number: 1 (lower is better) Translates to: RQTRKWRGGEETCLS*RGLWFLTLHLYHRM Trigger: CATCCTATGATATAGGTGTAGGGTAAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | GAGGTATTTCTCCTACATCCATGCCACCACATAGCAGATGAGGTATaGAGCCAGGCCTATTATGCTGGTCAGGTGAGGTGTGAGGCCAGA | + |
Preference number: 1 (lower is better) Translates to: EVFLLHPCHHIADEV*SQAYYAGQVRCEAR Trigger: TCTGGCCTCACACCTCACCTGACCAGCATAATAGGCCTGGCTCCATACCTCATCTGCTATGTGGTGGCATGGATGTAGGAGAAATACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TCAATCTCCAACTGTCCAATGTCTGGGATCCAACTCACGATCTTCTaGGCTCCTTCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTT | + |
Preference number: 1 (lower is better) Translates to: SISNCPMSGIQLTIF*APSRAWVTSPAMPF Trigger: AAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGAAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACATTGGACAGTTGGAGATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | AAGTGGAGGGGTGGTGAGGAGACCTGCTTGTCTTGCAGAGGACTCTaGTTCCTTACCCTACACCTATATCATAGGATGCATGACAGCTTG | + |
Preference number: 1 (lower is better) Translates to: KWRGGEETCLSCRGL*FLTLHLYHRMHDSL Trigger: CAAGCTGTCATGCATCCTATGATATAGGTGTAGGGTAAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | CTTGCAGAGGACTCTGGTTCCTTACCCTACACCTATATCATAGGATaGATGACAGCTTGTAGCTCTAGTTCCTGGGGACCCAATGCTCTT | + |
Preference number: 1 (lower is better) Translates to: LAEDSGSLPYTYIIG*MTACSSSSWGPNAL Trigger: AAGAGCATTGGGTCCCCAGGAACTAGAGCTACAAGCTGTCATGCATCCTATGATATAGGTGTAGGGTAAGGAACCAGAGTCCTCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | TTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTaGTTGTCTTGCAGAGGACTCTGGTTCCTTACCCTACACCTATAT | + |
Preference number: 1 (lower is better) Translates to: LHLRQTRKWRGGEET*LSCRGLWFLTLHLY Trigger: ATATAGGTGTAGGGTAAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TTACCTACCAACAGCCAGGTAGGCCTTACTTGCTCTAAAAGAAACTaGCCGCTCTTTGCTCTCTCTGACTCTCTTCTTTCTCTGACCCCT | + |
Preference number: 1 (lower is better) Translates to: LPTNSQVGLTCSKRN*PLFALSDSLLSLTP Trigger: AGGGGTCAGAGAAAGAAGAGAGTCAGAGAGAGCAAAGAGCGGCCAGTTTCTTTTAGAGCAAGTAAGGCCTACCTGGCTGTTGGTAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | TATAGAAAAGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTaGGGAGACCTGCTTGTCTTGCAGAGGACTCTGGTTCCTTACCCT | + |
Preference number: 1 (lower is better) Translates to: YRKVTFTSDKEVEGW*GDLLVLQRTLVPYP Trigger: AGGGTAAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACTTTTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | ACCTTTAGTCCTCGTACTTTGGAAGCAGAGGCTGGCAGATCACTGTaGGTTCTAGTCCAGGTTGTTCCACATAGCCAGTTCTATACGATC | + |
Preference number: 1 (lower is better) Translates to: TFSPRTLEAEAGRSL*VLVQVVPHSQFYTI Trigger: GATCGTATAGAACTGGCTATGTGGAACAACCTGGACTAGAACTCACAGTGATCTGCCAGCCTCTGCTTCCAAAGTACGAGGACTAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | AGTTGGGAGTTCTACGTCTTCATCCAAAAGCTACTAGTGGAAGACTaGCTTCCAGGTAACTGGGGTAAGAGTCTTAAGCCCACACCCACA | + |
Preference number: 1 (lower is better) Translates to: SWEFYVFIQKLLVED*LPGNWGKSLKPTPT Trigger: TGTGGGTGTGGGCTTAAGACTCTTACCCCAGTTACCTGGAAGTCAGTCTTCCACTAGTAGCTTTTGGATGAAGACGTAGAACTCCCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | CTGCATGAAGCTGTGGAGAGCACCTGGATATTAACAAAGGGCAGCTaGAAAGCAGGCTTGCTTGGCTTCAGTCACTCATTGATTCATTTT | + |
Preference number: 1 (lower is better) Translates to: LHEAVESTWILTKGS*KAGLLGFSHSLIHF Trigger: AAAATGAATCAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGTGCTCTCCACAGCTTCATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | CATTGCAAAGACTGCAGTTGTCAGCGTCACTCTGTCAGAAAAGTGTaGAGTGTCTTGGCCCATGAAGTGCAGCTTTCTTCTTCCATAGTT | + |
Preference number: 1 (lower is better) Translates to: HCKDCSCQRHSVRKV*SVLAHEVQLSSSIV Trigger: AACTATGGAAGAAGAAAGCTGCACTTCATGGGCCAAGACACTGCACACTTTTCTGACAGAGTGACGCTGACAACTGCAGTCTTTGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | CTTCCAAGCTCCTACACAACATCTGACAGAGCTCTTAACACTGAATaGATCTTCTATCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCC | + |
Preference number: 1 (lower is better) Translates to: LPSSYTTSDRALNTE*IFYPKVPKSFHSPP Trigger: GGGAGGACTGTGGAAGGACTTTGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTAGGAGCTTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | ACTCTTACACATTACCAAGTCCAGCCACAGCACAAGGTACAACCTTaGCTATCTCTGGAACACAGCCTCTGTGCTTTCAGAAAACACTTC | + |
Preference number: 1 (lower is better) Translates to: TLTHYQVQPQHKVQP*LSLEHSLCAFRKHF Trigger: GAAGTGTTTTCTGAAAGCACAGAGGCTGTGTTCCAGAGATAGCCAAGGTTGTACCTTGTGCTGTGGCTGGACTTGGTAATGTGTAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | GTTCAGAACAACCTCTGTAACTTCAGTCAGTCACTGGGTGTGGGATaGTTTATTCAAGCCTTGAAAGGCACAGGGTATGCATGTGCTACA | + |
Preference number: 1 (lower is better) Translates to: VQNNLCNFSQSLGVG*FIQALKGTGYACAT Trigger: TGTAGCACATGCATACCCTGTGCCTTTCAAGGCTTGAATAAATCATCCCACACCCAGTGACTGACTGAAGTTACAGAGGTTGTTCTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TCTCAGCTTGCTTCTTTATATAAGGCATTGCTAGATACCCAGGGTTaGGAATTATCCAGTAAGAGCTGCACCCTCCCATATCAACCATTG | + |
Preference number: 1 (lower is better) Translates to: SQLASLYKALLDTQG*ELSSKSCTLPYQPL Trigger: CAATGGTTGATATGGGAGGGTGCAGCTCTTACTGGATAATTCCCAACCCTGGGTATCTAGCAATGCCTTATATAAAGAAGCAAGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | ACAGTATACCCTTTTGCCCAAACAGCTTTACTTAGAAATGTTCGTTaGAATGAGTCATTGGTCTGGTTGAGGCCTCTGACTTCTGCTACA | + |
Preference number: 1 (lower is better) Translates to: TVYPFAQTALLRNVR*NESLVWLRPLTSAT Trigger: TGTAGCAGAAGTCAGAGGCCTCAACCAGACCAATGACTCATTGCAACGAACATTTCTAAGTAAAGCTGTTTGGGCAAAAGGGTATACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | GTCTGTCTCTTGACACAGAAACTCAGAGGAATGGCTATCTCACAATaGCTCTCTCAGCTTGCTTCTTTATATAAGGCATTGCTAGATACC | + |
Preference number: 1 (lower is better) Translates to: VCLLTQKLRGMAISQ*LSQLASLYKALLDT Trigger: GGTATCTAGCAATGCCTTATATAAAGAAGCAAGCTGAGAGAGCCATTGTGAGATAGCCATTCCTCTGAGTTTCTGTGTCAAGAGACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | ATCCTAAGTTTGTCTGTTGCTGAACATGGAGACAGAAATGCTTCTTaGATTTGTGGGGTGACAGCCAGTAGTCTTGTTCCCAATCTTTCT | + |
Preference number: 1 (lower is better) Translates to: ILSLSVAEHGDRNAS*ICGVTASSLVPNLS Trigger: AGAAAGATTGGGAACAAGACTACTGGCTGTCACCCCACAAATTCAAGAAGCATTTCTGTCTCCATGTTCAGCAACAGACAAACTTAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | GTGGTAAACCAGTTTTACAAATCCTTGTTAGTCCCATTTTCTCAGTaGTGGAGCATTGTCTGGTCTTCCAGAGAAGACAGGTTCATTTCT | + |
Preference number: 1 (lower is better) Translates to: VVNQFYKSLLVPFSQ*WSIVWSSREDRFIS Trigger: AGAAATGAACCTGTCTTCTCTGGAAGACCAGACAATGCTCCAGCACTGAGAAAATGGGACTAACAAGGATTTGTAAAACTGGTTTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | TACAAATCCTTGTTAGTCCCATTTTCTCAGTGCTGGAGCATTGTCTaGTCTTCCAGAGAAGACAGGTTCATTTCTAGCAATCAGACATTG | + |
Preference number: 1 (lower is better) Translates to: YKSLLVPFSQCWSIV*SSREDRFISSNQTL Trigger: CAATGTCTGATTGCTAGAAATGAACCTGTCTTCTCTGGAAGACCAGACAATGCTCCAGCACTGAGAAAATGGGACTAACAAGGATTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | GTAAACCAGTTTTACAAATCCTTGTTAGTCCCATTTTCTCAGTGCTaGAGCATTGTCTGGTCTTCCAGAGAAGACAGGTTCATTTCTAGC | + |
Preference number: 1 (lower is better) Translates to: VNQFYKSLLVPFSQC*SIVWSSREDRFISS Trigger: GCTAGAAATGAACCTGTCTTCTCTGGAAGACCAGACAATGCTCCAGCACTGAGAAAATGGGACTAACAAGGATTTGTAAAACTGGTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 90 bp | GCACCTCAGCCTAATAAACGAGACCTTGATAGGTTGATATCTACTTaGTCCTCCGACTTTCTTTCTTTTATTCCCATTTCCTTCCAGGTT | + |
Preference number: 1 (lower is better) Translates to: APQPNKRDLDRLIST*SSDFLSFIPISFQV Trigger: AACCTGGAAGGAAATGGGAATAAAAGAAAGAAAGTCGGAGGACCAAGTAGATATCAACCTATCAAGGTCTCGTTTATTAGGCTGAGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | ATAACTCCAGTTGTGTCAAGTTGGCACAAAATTAGCCAGTACAATTaGCTCCTTGTCAACTTGACACACAAACACATTGTCAGAGACCAT | + |
Preference number: 1 (lower is better) Translates to: ITPVVSSWHKISQYN*LLVNLTHKHIVRDH Trigger: ATGGTCTCTGACAATGTGTTTGTGTGTCAAGTTGACAAGGAGTCAATTGTACTGGCTAATTTTGTGCCAACTTGACACAACTGGAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR GCA 90 bp | TCAAATTGGCATGAAATTAAACCTGCTGATATATCCCGCATAATTTaGAGACAGGTTTTACACAGTATACCCTTTTGCCCAAACAGCTTT | + |
Preference number: 1 (lower is better) Translates to: SNWHEIKPADISRII*RQVLHSIPFCPNSF Trigger: AAAGCTGTTTGGGCAAAAGGGTATACTGTGTAAAACCTGTCTGCAAATTATGCGGGATATATCAGCAGGTTTAATTTCATGCCAATTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 90 bp | CTTTATGTTCTTACATCACTTCCTTTTGAGTCAAATGACACAGACTaGTTTAGAAGGTGCTTGATTTGCCTGTTTCTGGTTCTTTCAAAC | + |
Preference number: 1 (lower is better) Translates to: LYVLTSLPFESNDTD*FRRCLICLFLVLSN Trigger: GTTTGAAAGAACCAGAAACAGGCAAATCAAGCACCTTCTAAATCAGTCTGTGTCATTTGACTCAAAAGGAAGTGATGTAAGAACATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | CACTTGTTCCAAGGGCCAGCGTTCCCACATTGCTCAGGTGAGGGGTaGGGACAGCTCTCTGGTGCACTCTTCCTCTGCGCTAGCTCTCCC | + |
Preference number: 2 (lower is better) Translates to: HLFQGPAFPHCSGEG*GQLSGALFLCASSP Trigger: GGGAGAGCTAGCGCAGAGGAAGAGTGCACCAGAGAGCTGTCCCAACCCCTCACCTGAGCAATGTGGGAACGCTGGCCCTTGGAACAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | GCTGACAAGCTGTCTTGCACCCACCCCACCAGAGCCACCTCTACCTaGCTGCCTAGGAGAAGGGCAGGGATAGATCTCCTGAGTCTGGTG | + |
Preference number: 2 (lower is better) Translates to: ADKLSCTHPTRATST*LPRRRAGIDLLSLV Trigger: CACCAGACTCAGGAGATCTATCCCTGCCCTTCTCCTAGGCAGCAAGGTAGAGGTGGCTCTGGTGGGGTGGGTGCAAGACAGCTTGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTGAAGTGGAGGGGTGGTaGGGAGACCTGCTTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: GLLKVSAGSGYQGKASQFEVEGW*GDLLVL Trigger: CAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTC...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGCCTGAGTCTGGTGACTaGCAAGAGGTGGGGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMPESGD*QEVGAA Trigger: AGCTGCCCCCACCTCTTGCCAGTCACCAGACTCAGG...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTCGTCAGACAAGGAAGTaGAGGGGTGGTGAGGAGACC | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPARQTRK*RGGEET Trigger: GGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACG...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTGTCCCATTTTCTCAGTaGTGGAGCATTGTCTGGTCT | + |
Preference number: 2 (lower is better) Translates to: GLLKVSAGSGYQGKASQFVPFSQ*WSIVWS Trigger: AGACCAGACAATGCTCCAGCACTGAGAAAATGGGAC...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGGGTGGTGAGGAGACCTaGTTGTCTTGCAGAGGACTC | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMGGEET*LSCRGL Trigger: GAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACC...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGGCTGGCAGATCACTGTaGGTTCTAGTCCAGGTTGTT | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMAGRSL*VLVQVV Trigger: AACAACCTGGACTAGAACTCACAGTGATCTGCCAGC...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTTTTGTGCGACAGAGCTaGATGAAGCTGTGGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPAFVRQS*MKLWRA Trigger: TGCTCTCCACAGCTTCATGCAGCTCTGTCGCACAAA...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCCCTGCTGAAGGTGAGTaGTGGGTCAGGCTACCAGGG | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFPAEGE*WVRLPG Trigger: CCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGG...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTGGCACAGGCAGAGTTaGGAGTTCTACGTCTTCATC | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMWHRQS*EFYVFI Trigger: GATGAAGACGTAGAACTCCCAACTCTGCCTGTGCCA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | CTGCCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTaGCACCTAAGAACTGGCCACTCTTTGCTCTCTCTAGGAGGCAGG | + |
Preference number: 2 (lower is better) Translates to: LPYRPQEARNYNNTV*HLRTGHSLLSLGGR Trigger: CCTGCCTCCTAGAGAGAGCAAAGAGTGGCCAGTTCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTACACCTGTACAAATGTaGCATATACCCACAAAGACA | + |
Preference number: 2 (lower is better) Translates to: GLLKVSAGSGYQGKASQFTPVQM*HIPTKT Trigger: TGTCTTTGTGGGTATATGTCACATTTGTACAGGTGT...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAGAAGTGGAGGGGTGGTaGGGAGACCTGCTTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLREVEGW*GDLLVL Trigger: CAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTC...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTCAGGTAGGCCTTACTTaGTCTAAAAGAAACTGGCCG | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPAQVGLT*SKRNWP Trigger: CGGCCAGTTTCTTTTAGAGCAAGTAAGGCCTACCTG...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTTTGGAAGCAGAGGCTaGCAGATCACTGTGAGTTCT | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMFGSRG*QITVSS Trigger: AGAACTCACAGTGATCTGCCAGCCTCTGCTTCCAAA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTCCAACAAACTCAGGTaGTCATGTACTCAGGTGATC | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMSNKLR*SCTQVI Trigger: GATCACCTGAGTACATGATCACCTGAGTTTGTTGGA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATGGTGGTGAGGAGACCTaGTTGTCTTGCAGAGGACTC | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDGGEET*LSCRGL Trigger: GAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACC...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTTATCCAGTAAGAGCTaGACCCTCCCATATCAACCA | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMLSSKS*TLPYQP Trigger: TGGTTGATATGGGAGGGTGCAGCTCTTACTGGATAA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTGTCAGTCACTGGGTGTaGGATGATTTATTCAAGCCT | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPAVSHWV*DDLFKP Trigger: AGGCTTGAATAAATCATCCCACACCCAGTGACTGAC...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTGAAAGGCACAGGGTATaGATGTGCTACACAGTTATA | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPAERHRV*MCYTVI Trigger: TATAACTGTGTAGCACATGCATACCCTGTGCCTTTC...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACCACCTCTACCTTGCTaGCTAGGAGAAGGGCAGGGA | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPPPLPC*LGEGQG Trigger: TCCCTGCCCTTCTCCTAGGCAGCAAGGTAGAGGTGG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTGTCAGTCACTGGGTGTaGGATGATTTATTCAAGCCT | + |
Preference number: 2 (lower is better) Translates to: SYIYVRQGSGGVVRRPACVSHWV*DDLFKP Trigger: AGGCTTGAATAAATCATCCCACACCCAGTGACTGAC...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGACTTCAGTCAGTCACTaGGTGTGGGATGATTTATTC | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMTSVSH*VWDDLF Trigger: GAATAAATCATCCCACACCCAGTGACTGACTGAAGT...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACGTCAGACAAGGAAGTaGAGGGGTGGTGAGGAGACC | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPRQTRK*RGGEET Trigger: GGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | GACTCTTACACATTACCAAGTCCAGCCACAGCACAAGGTACAACCTaGGCTATCTCTGGAACACAGCCTCTGTGCTTTCAGAAAACACTT | + |
Preference number: 2 (lower is better) Translates to: DSYTLPSPATAQGTT*AISGTQPLCFQKTL Trigger: AAGTGTTTTCTGAAAGCACAGAGGCTGTGTTCCAGAGATAGCCAAGGTTGTACCTTGTGCTGTGGCTGGACTTGGTAATGTGTAAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTTGCGACAGAGCTGCATaGAGCTGTGGAGAGCACCTG | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVCDRAA*SCGEHL Trigger: CAGGTGCTCTCCACAGCTTCATGCAGCTCTGTCGCA...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGACAGTGTCTTGGCCCATaGAGTGCAGCTTTCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRQCLGP*SAAFFF Trigger: GAAGAAGAAAGCTGCACTTCATGGGCCAAGACACTG...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATTTAACAAAGGGCAGCTaGAAAGCAGGCTTGCTTGGC | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDLTKGS*KAGLLG Trigger: GCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAA...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCTTTGTGCGACAGAGCTaGATGAAGCTGTGGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFFVRQS*MKLWRA Trigger: TGCTCTCCACAGCTTCATGCAGCTCTGTCGCACAAA...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCAATGGACTAAAGGGCTaGCAGTTCTCCTCACTGGGA | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFNGLKG*QFSSLG Trigger: TCCCAGTGAGGAGAACTGGCAGCCCTTTAGTCCATT...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTCTAGCAATCAGACATTaGTTCAGAACAACCTCTGTA | + |
Preference number: 2 (lower is better) Translates to: PVSQSHPPLPTFLSYEPALAIRH*FRTTSV Trigger: TACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAG...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATTGCTGGAGCATTGTCTaGTCTTCCAGAGAAGACAGG | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDCWSIV*SSREDR Trigger: CCTGTCTTCTCTGGAAGACCAGACAATGCTCCAGCA...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACCCTCCTGCAGGAGGTaGAAGTGGGTGATTATGGAG | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPPSCRR*KWVIME Trigger: CTCCATAATCACCCACTTCCACCTCCTGCAGGAGGG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTGTTGGGACAGCTCTCTaGTGCACTCTTCCTCTGCGC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVVGTAL*CTLPLR Trigger: GCGCAGAGGAAGAGTGCACCAGAGAGCTGTCCCAAC...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | GCTATCTCACAATGGCTCTCTCAGCTTGCTTCTTTATATAAGGCATaGCTAGATACCCAGGGTTGGGAATTATCCAGTAAGAGCTGCACC | + |
Preference number: 2 (lower is better) Translates to: AISQWLSQLASLYKA*LDTQGWELSSKSCT Trigger: GGTGCAGCTCTTACTGGATAATTCCCAACCCTGGGTATCTAGCAATGCCTTATATAAAGAAGCAAGCTGAGAGAGCCATTGTGAGATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTCAAATGACACAGACTaGTTTAGAAGGTGCTTGATT | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMSNDTD*FRRCLI Trigger: AATCAAGCACCTTCTAAATCAGTCTGTGTCATTTGA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAAGAGGAATAGGAAGTTaGAGGAAGACGGAGCACAAC | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRRGIGS*RKTEHN Trigger: GTTGTGCTCCGTCTTCCTTCAACTTCCTATTCCTCT...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACCACATAGCAGATaGGGTATGGAGCCAGGCCTA | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVPPHSR*GMEPGL Trigger: TAGGCCTGGCTCCATACCTCATCTGCTATGTGGTGG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GCTACCAGGGTAAAGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTGGTTGAGACCTGCTTGTCTTaGAGAGGACTCTGGTTCCTT | + |
Preference number: 2 (lower is better) Translates to: ATRVKLPSLYLYFRNPLVETCLS*RGLWFL Trigger: AAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTC...AACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGATATCCCGCATAATTTaGAGACAGGTTTTACACAGT | + |
Preference number: 2 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMISRII*RQVLHS Trigger: ACTGTGTAAAACCTGTCTGCAAATTATGCGGGATAT...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCAAGTGTGCAGTGTCTTaGCCCATGAAGTGCAGCTTT | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFKCAVS*PMKCSF Trigger: AAAGCTGCACTTCATGGGCCAAGACACTGCACACTT...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGATTAGTCCTCGTACTTTaGAAGCAGAGGCTGGCAGAT | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRLVLVL*KQRLAD Trigger: ATCTGCCAGCCTCTGCTTCCAAAGTACGAGGACTAA...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGCAGTGTCTTGGCCCATaGAGTGCAGCTTTCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLQCLGP*SAAFFF Trigger: GAAGAAGAAAGCTGCACTTCATGGGCCAAGACACTG...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAAGAGCTTGGCAAAAATaGCCACCTTGCCATGTAGGG | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPRAWQK*PPCHVG Trigger: CCCTACATGGCAAGGTGGTCATTTTTGCCAAGCTCT...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGATCTGTCAGAAAAGTGTaGAGTGTCTTGGCCCATGAA | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRSVRKV*SVLAHE Trigger: TTCATGGGCCAAGACACTGCACACTTTTCTGACAGA...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTTGTGACTGGTACATTTaGCTTCTATTGACTGAATTC | + |
Preference number: 2 (lower is better) Translates to: SYIYVRQGSGGVVRRPACCDWYI*LLLTEF Trigger: GAATTCAGTCAATAGAAGCCAAATGTACCAGTCACA...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGATGCTCTAAAAGAAACTaGCCGCTCTTTGCTCTCTCT | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRCSKRN*PLFALS Trigger: AGAGAGAGCAAAGAGCGGCCAGTTTCTTTTAGAGCA...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | TATTTGTACTTTAGGAATCCTCTGGTTCTCAACTTCAAGGCAGCATaGCAAAGACTGCAGTTGTCAGCGTCACTCTGTCAGAAAAGTGTG | + |
Preference number: 2 (lower is better) Translates to: YLYFRNPLVLNFKAA*QRLQLSASLCQKSV Trigger: CACACTTTTCTGACAGAGTGACGCTGACAACTGCAGTCTTTGCAATGCTGCCTTGAAGTTGAGAACCAGAGGATTCCTAAAGTACAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAGTGAGGCCAGAAATCTaGAGTGTGATAGCTGACAAG | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPVRPEI*SVIADK Trigger: CTTGTCAGCTATCACACTTCAGATTTCTGGCCTCAC...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTGGAGGTGGAAGTGGGTaGTTATGGAGGTATTTCTCC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVGGGSG*LWRYFS Trigger: GGAGAAATACCTCCATAATCACCCACTTCCACCTCC...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTGTTTTGTGTACACAGTaGCATCAAGCAAAATATAGA | + |
Preference number: 2 (lower is better) Translates to: SYIYVRQGSGGVVRRPACVLCTQ*HQAKYR Trigger: TCTATATTTTGCTTGATGGCACTGTGTACACAAAAC...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR GCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTGAGACCTGCTTGTCTTaGAGAGGACTCTGGTTCCTT | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVETCLS*RGLWFL Trigger: AAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTC...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGTTAGTCCTCGTACTTTaGAAGCAGAGGCTGGCAGAT | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLLVLVL*KQRLAD Trigger: ATCTGCCAGCCTCTGCTTCCAAAGTACGAGGACTAA...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTTGGCACAGGCAGAGTTaGGAGTTCTACGTCTTCATC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVWHRQS*EFYVFI Trigger: GATGAAGACGTAGAACTCCCAACTCTGCCTGTGCCA...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CAA 90 bp | GTGGAGAGCACCTGGATATTAACAAAGGGCAGCTGCAAAGCAGGCTaGCTTGGCTTCAGTCACTCATTGATTCATTTTGAAAAATACAAA | + |
Preference number: 2 (lower is better) Translates to: VESTWILTKGSCKAG*LGFSHSLIHFEKYK Trigger: TTTGTATTTTTCAAAATGAATCAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGTGCTCTCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR TCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATACACCTGTACAAATGTaGCATATACCCACAAAGACA | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDTPVQM*HIPTKT Trigger: TGTCTTTGTGGGTATATGTCACATTTGTACAGGTGT...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR TCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCAATAAGAGAGCATGTTaGAAGGAGTGGAGAGAATGT | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFNKRAC*KEWREC Trigger: ACATTCTCTCCACTCCTTTCAACATGCTCTCTTATT...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR TCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAAATAAGAGAGCATGTTaGAAGGAGTGGAGAGAATGT | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRNKRAC*KEWREC Trigger: ACATTCTCTCCACTCCTTTCAACATGCTCTCTTATT...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR TCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGTCCAACAAACTCAGGTaGTCATGTACTCAGGTGATC | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLSNKLR*SCTQVI Trigger: GATCACCTGAGTACATGATCACCTGAGTTTGTTGGA...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR GCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTTTAACAAAGGGCAGCTaGAAAGCAGGCTTGCTTGGC | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFLTKGS*KAGLLG Trigger: GCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAA...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCACATGGAGACAGAAATaGTTCTTGAATTTGTGGGGT | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFTWRQK*FLNLWG Trigger: ACCCCACAAATTCAAGAAGCATTTCTGTCTCCATGT...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCCTAGCAATCAGACATTaGTTCAGAACAACCTCTGTA | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFLAIRH*FRTTSV Trigger: TACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAG...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTTGCTGGAGCATTGTCTaGTCTTCCAGAGAAGACAGG | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFCWSIV*SSREDR Trigger: CCTGTCTTCTCTGGAAGACCAGACAATGCTCCAGCA...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCATTTTCTCAGTGCTaGAGCATTGTCTGGTCTTCC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVPFSQC*SIVWSS Trigger: GGAAGACCAGACAATGCTCCAGCACTGAGAAAATGG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATAGCTATGGAATTTCTTaGGCTAACATGATCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDSYGIS*ANMIRA Trigger: TGCTCTGATCATGTTAGCCCAAGAAATTCCATAGCT...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAAGCTATGGAATTTCTTaGGCTAACATGATCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: PYRPQEARNYNNTVLHLRSYGIS*ANMIRA Trigger: TGCTCTGATCATGTTAGCCCAAGAAATTCCATAGCT...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACAAAGCAGGCTTGCTTaGCTTCAGTCACTCATTGAT | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPQSRLA*LQSLID Trigger: ATCAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTAAGTGTGCAGTGTCTTaGCCCATGAAGTGCAGCTTT | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVKCAVS*PMKCSF Trigger: AAAGCTGCACTTCATGGGCCAAGACACTGCACACTT...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | TTTGCCCAAACAGCTTTACTTAGAAATGTTCGTTGCAATGAGTCATaGGTCTGGTTGAGGCCTCTGACTTCTGCTACAGTATTAATACTG | + |
Preference number: 2 (lower is better) Translates to: FAQTALLRNVRCNES*VWLRPLTSATVLIL Trigger: CAGTATTAATACTGTAGCAGAAGTCAGAGGCCTCAACCAGACCAATGACTCATTGCAACGAACATTTCTAAGTAAAGCTGTTTGGGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAGATTTATTCAAGCCTTaGAAGGCACAGGGTATGCAT | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPDLFKP*KAQGMH Trigger: ATGCATACCCTGTGCCTTTCAAGGCTTGAATAAATC...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAGATTTAGAAGGTGCTTaGTTTGCCTGTTTCTGGTTC | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPDLEGA*FACFWF Trigger: GAACCAGAAACAGGCAAATCAAGCACCTTCTAAATC...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCTCAAATGACACAGACTaGTTTAGAAGGTGCTTGATT | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFSNDTD*FRRCLI Trigger: AATCAAGCACCTTCTAAATCAGTCTGTGTCATTTGA...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGGAAAGGCACAGGGTATaGATGTGCTACACAGTTATA | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLERHRV*MCYTVI Trigger: TATAACTGTGTAGCACATGCATACCCTGTGCCTTTC...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCATGCTTTAGATTTTTCTaGCCTATAGGCCTCAGGAAG | + |
Preference number: 2 (lower is better) Translates to: TTSDRALNTEWIFYPKVPCFRFF*PIGLRK Trigger: CTTCCTGAGGCCTATAGGGCAGAAAAATCTAAAGCA...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTCCATTTTCTCAGTGCTaGAGCATTGTCTGGTCTTCC | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFPFSQC*SIVWSS Trigger: GGAAGACCAGACAATGCTCCAGCACTGAGAAAATGG...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTTGCTCTAAAAGAAACTaGCCGCTCTTTGCTCTCTCT | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVCSKRN*PLFALS Trigger: AGAGAGAGCAAAGAGCGGCCAGTTTCTTTTAGAGCA...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTTGCAGGAGGTGGAAGTaGGTGATTATGGAGGTATTT | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVCRRWK*VIMEVF Trigger: AAATACCTCCATAATCACCCACTTCCACCTCCTGCA...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCTAGATACCCAGGGTTaGGAATTATCCAGTAAGAGC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVLDTQG*ELSSKS Trigger: GCTCTTACTGGATAATTCCCAACCCTGGGTATCTAG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGCTCAGATCAAGGGTGTaGAACAATAAGAAGATTGTC | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLLRSRV*NNKKIV Trigger: GACAATCTTCTTATTGTTTCACACCCTTGATCTGAG...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCATCCATTTAAAAGAGTaGCAAATCGAGAATGAGATG | + |
Preference number: 2 (lower is better) Translates to: KFWDEKHGIPEARLPEVFIHLKE*QIENEM Trigger: CATCTCATTCTCGATTTGCCACTCTTTTAAATGGAT...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATTTTAAGTTCTGTGACTaGTACATTTGGCTTCTATTG | + |
Preference number: 2 (lower is better) Translates to: VERSGENVWTRGVSDFCDFKFCD*YIWLLL Trigger: CAATAGAAGCCAAATGTACCAGTCACAGAACTTAAA...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTCAAAGCAGGCTTGCTTaGCTTCAGTCACTCATTGAT | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFQSRLA*LQSLID Trigger: ATCAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTG...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGTGTAGTACAAAAGAATaGACTAAAGGGCTGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLCSTKE*TKGLPV Trigger: AACTGGCAGCCCTTTAGTCCATTCTTTTGTACTACA...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGAGTGAAAAGAAAAGGTaGGATGTGAGGTCTCAAAGA | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLSEKKR*DVRSQR Trigger: TCTTTGAGACCTCACATCCCACCTTTTCTTTTCACT...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTACTCAGACATCAGCATaGCCTTTCATCTTCTACATC | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVTQTSA*PFIFYI Trigger: GATGTAGAAGATGAAAGGCCATGCTGATGTCTGAGT...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTGATTTATTCAAGCCTTaGAAGGCACAGGGTATGCAT | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFDLFKP*KAQGMH Trigger: ATGCATACCCTGTGCCTTTCAAGGCTTGAATAAATC...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGCTATACGATCCATGGTaGAATAGTAAGACTCTGTTT | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLLYDPW*NSKTLF Trigger: AAACAGAGTCTTACTATTTCACCATGGATCGTATAG...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTGAACAATTTCTCAATTaGGGTTCCTCTTTCTGGATG | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVEQFLN*GSSFWM Trigger: CATCCAGAAAGAGGAACCTCAATTGAGAAATTGTTC...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR GCA 90 bp | GCTACCAGGGTAAAGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTGGTTGTTTTGTGTACACAGTaGCATCAAGCAAAATATAGA | + |
Preference number: 2 (lower is better) Translates to: ATRVKLPSLYLYFRNPLVVLCTQ*HQAKYR Trigger: TCTATATTTTGCTTGATGGCACTGTGTACACAAAAC...AACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGTGTGACTGGTACATTTaGCTTCTATTGACTGAATTC | + |
Preference number: 2 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLCDWYI*LLLTEF Trigger: GAATTCAGTCAATAGAAGCCAAATGTACCAGTCACA...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CCA 90 bp | GCTACCAGGGTAAAGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTGGTTTTTAAGTTCTGTGACTaGTACATTTGGCTTCTATTG | + |
Preference number: 2 (lower is better) Translates to: ATRVKLPSLYLYFRNPLVFKFCD*YIWLLL Trigger: CAATAGAAGCCAAATGTACCAGTCACAGAACTTAAA...AACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 90 bp | TATATCCCGCATAATTTGCAGACAGGTTTTACACAGTATACCCTTTaGCCCAAACAGCTTTACTTAGAAATGTTCGTTGCAATGAGTCAT | + |
Preference number: 2 (lower is better) Translates to: YIPHNLQTGFTQYTL*PKQLYLEMFVAMSH Trigger: ATGACTCATTGCAACGAACATTTCTAAGTAAAGCTGTTTGGGCAAAAGGGTATACTGTGTAAAACCTGTCTGCAAATTATGCGGGATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR TCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTCTCAGATCAAGGGTGTaGAACAATAAGAAGATTGTC | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFLRSRV*NNKKIV Trigger: GACAATCTTCTTATTGTTTCACACCCTTGATCTGAG...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR TCA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTGATTTAGAAGGTGCTTaGTTTGCCTGTTTCTGGTTC | + |
Preference number: 2 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFDLEGA*FACFWF Trigger: GAACCAGAAACAGGCAAATCAAGCACCTTCTAAATC...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR GCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCTGAAGATAAACACATaGTTAAAGTGCTATTTGGGT | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVLKINT*LKCYLG Trigger: ACCCAAATAGCACTTTAAGCATGTGTTTATCTTCAG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTATCCATTTAAAAGAGTaGCAAATCGAGAATGAGATG | + |
Preference number: 2 (lower is better) Translates to: YTTSDRALNTEWIFYPKVIHLKE*QIENEM Trigger: CATCTCATTCTCGATTTGCCACTCTTTTAAATGGAT...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR GCA 90 bp | AGGTTAAGCACACCTTTCTTCACACCTTCTTTATGTTCTTACATCACTTCCTTTCTGAAGATAAACACATaGTTAAAGTGCTATTTGGGT | + |
Preference number: 2 (lower is better) Translates to: RLSTPFFTPSLCSYITSFLKINT*LKCYLG Trigger: ACCCAAATAGCACTTTAAGCATGTGTTTATCTTCAG...AAAGGAAGTGATGTAAGAACATAAAGAAGGTGTGAAGAAAGGTGTGCTTAACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | GGGATAGATCTCCTGAGTCTGGTGACTGGCAAGAGGTaGGGGCAGCTCTGCCACTGCATGCAAAGGGTAGGG | + |
Preference number: 3 (lower is better) Translates to: GIDLLSLVTGKR*GQLCHCMQRVG Trigger: CCCTACCCTTTGCATGCAGTGGCAGAGCTGCCCCCACCTCTTGCCAGTCACCAGACTCAGGAGATCTATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | GAGAAGGGCAGGGATAGATCTCCTGAGTCTGGTGACTaGCAAGAGGTGGGGGCAGCTCTGCCACTGCATGCA | + |
Preference number: 3 (lower is better) Translates to: EKGRDRSPESGD*QEVGAALPLHA Trigger: TGCATGCAGTGGCAGAGCTGCCCCCACCTCTTGCCAGTCACCAGACTCAGGAGATCTATCCCTGCCCTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | TGGCCTCTCACAGTGCCGAGCCTCAGCTGCTCTTTGTaGCCCCTTCATGCCTTCAAAACCAGCACCACCTGG | + |
Preference number: 3 (lower is better) Translates to: WPLTVPSLSCSL*PLHAFKTSTTW Trigger: CCAGGTGGTGCTGGTTTTGAAGGCATGAAGGGGTCACAAAGAGCAGCTGAGGCTCGGCACTGTGAGAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | CTTGAGCACTTGTTCCAAGGGCCAGCGTTCCCACATTaGTCAGGTGAGGGGTTGGGACAGCTCTCTGGTGCA | + |
Preference number: 3 (lower is better) Translates to: LEHLFQGPAFPH*SGEGLGQLSGA Trigger: TGCACCAGAGAGCTGTCCCAACCCCTCACCTGAGCAATGTGGGAACGCTGGCCCTTGGAACAAGTGCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GACATTCAAGGACATGAGCTGTGCCTGAGCCCAGCCTaGCCCCCAAGGCTGTCAAGGAGGATCGATGTTCCA | + |
Preference number: 3 (lower is better) Translates to: DIQGHELCLSPA*PPRLSRRIDVP Trigger: TGGAACATCGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTCAGGCACAGCTCATGTCCTTGAATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | GATCGATGTTCCAGAGATAAGATCCAGAGTGCCCGCTaGTTGGCACCTGACTTCGGCCCCCATGTCAGCAGT | + |
Preference number: 3 (lower is better) Translates to: DRCSRDKIQSAR*LAPDFGPHVSS Trigger: ACTGCTGACATGGGGGCCGAAGTCAGGTGCCAAGCAGCGGGCACTCTGGATCTTATCTCTGGAACATCGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GCGCTAGCTCTCCCTCCTGCAGGAGGTGGAAGTGGGTaGTTATGGAGGTATTTCTCCTACATCCATGCCACC | + |
Preference number: 3 (lower is better) Translates to: ALALPPAGGGSG*LWRYFSYIHAT Trigger: GGTGGCATGGATGTAGGAGAAATACCTCCATAATCACCCACTTCCACCTCCTGCAGGAGGGAGAGCTAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTAAAGTGTGCAGTGTCTaGGCCCATGAAGTGCAGCTT | + |
Preference number: 3 (lower is better) Translates to: GLLKVSAGSGYQGKASQFKVCSV*AHEVQL Trigger: AAGCTGCACTTCATGGGCCAAGACACTGCACACTTT...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | TCTGGTGCACTCTTCCTCTGCGCTAGCTCTCCCTCCTaGAGGAGGTGGAAGTGGGTGATTATGGAGGTATTT | + |
Preference number: 3 (lower is better) Translates to: SGALFLCASSPS*RRWKWVIMEVF Trigger: AAATACCTCCATAATCACCCACTTCCACCTCCTGCAGGAGGGAGAGCTAGCGCAGAGGAAGAGTGCACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CTCCAGATGCCTGTACTCCACTGCTGCTGCTCTTGGTaGTCATCTCATGGTACTGGCATCTCCAAAGCACTG | + |
Preference number: 3 (lower is better) Translates to: LQMPVLHCCCSW*SSHGTGISKAL Trigger: CAGTGCTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGTGGAGTACAGGCATCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | AACTGTCCAATGTCTGGGATCCAACTCACGATCTTCTaGGCTCCTTCAAGGGCTTGGGTCACTTCTCCAGCC | + |
Preference number: 3 (lower is better) Translates to: NCPMSGIQLTIF*APSRAWVTSPA Trigger: GGCTGGAGAAGTGACCCAAGCCCTTGAAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACATTGGACAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GACCCCTTCATGCCTTCAAAACCAGCACCACCTGGGTaGCTCTTACACATTACCAAGTCCAGCCACAGCACA | + |
Preference number: 3 (lower is better) Translates to: DPFMPSKPAPPG*LLHITKSSHST Trigger: TGTGCTGTGGCTGGACTTGGTAATGTGTAAGAGTCACCCAGGTGGTGCTGGTTTTGAAGGCATGAAGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | AGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTCTTaGAGAGGACTCTGGTTCCTTACCCTACACCTATAT | + |
Preference number: 3 (lower is better) Translates to: RKWRGGEETCLS*RGLWFLTLHLY Trigger: ATATAGGTGTAGGGTAAGGAACCAGAGTCCTCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | TGTGCGACAGAGCTGCATGAAGCTGTGGAGAGCACCTaGATATTAACAAAGGGCAGCTGCAAAGCAGGCTTG | + |
Preference number: 3 (lower is better) Translates to: CATELHEAVEST*ILTKGSCKAGL Trigger: CAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGTGCTCTCCACAGCTTCATGCAGCTCTGTCGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | ATCCAACTCACGATCTTCTGGGCTCCTTCAAGGGCTTaGGTCACTTCTCCAGCCATGCCCTTTGTAGCACAT | + |
Preference number: 3 (lower is better) Translates to: IQLTIFWAPSRA*VTSPAMPFVAH Trigger: ATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGAAGGAGCCCAGAAGATCGTGAGTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTCTCAGTGCTGGAGCATaGTCTGGTCTTCCAGAGAAG | + |
Preference number: 3 (lower is better) Translates to: PVSQSHPPLPTFLSYEPALSAGA*SGLPEK Trigger: CTTCTCTGGAAGACCAGACAATGCTCCAGCACTGAG...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTTGCTTAAAGTGCTATTaGGGTATGTCTTACCCACAG | + |
Preference number: 3 (lower is better) Translates to: GLLKVSAGSGYQGKASQFCLKCY*GMSYPQ Trigger: CTGTGGGTAAGACATACCCAAATAGCACTTTAAGCA...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | CCTCGTACTTTGGAAGCAGAGGCTGGCAGATCACTGTaGGTTCTAGTCCAGGTTGTTCCACATAGCCAGTTC | + |
Preference number: 3 (lower is better) Translates to: PRTLEAEAGRSL*VLVQVVPHSQF Trigger: GAACTGGCTATGTGGAACAACCTGGACTAGAACTCACAGTGATCTGCCAGCCTCTGCTTCCAAAGTACGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | GCTGTGGAGAGCACCTGGATATTAACAAAGGGCAGCTaGAAAGCAGGCTTGCTTGGCTTCAGTCACTCATTG | + |
Preference number: 3 (lower is better) Translates to: AVESTWILTKGS*KAGLLGFSHSL Trigger: CAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGTGCTCTCCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | ATGGCAGCATCCAGGCTGTCATGGCACAGGCAGAGTTaGGAGTTCTACGTCTTCATCCAAAAGCTACTAGTG | + |
Preference number: 3 (lower is better) Translates to: MAASRLSWHRQS*EFYVFIQKLLV Trigger: CACTAGTAGCTTTTGGATGAAGACGTAGAACTCCCAACTCTGCCTGTGCCATGACAGCCTGGATGCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GGTATTTCTCCTACATCCATGCCACCACATAGCAGATaGGGTATGGAGCCAGGCCTATTATGCTGGTCAGGT | + |
Preference number: 3 (lower is better) Translates to: GISPTSMPPHSR*GMEPGLLCWSG Trigger: ACCTGACCAGCATAATAGGCCTGGCTCCATACCTCATCTGCTATGTGGTGGCATGGATGTAGGAGAAATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GTCATCTTAGAACCTGAGTCTGAGCCTGGTGAAAGCTaGGTTAGACATACCACCCACCCTCTTGAGCACTTG | + |
Preference number: 3 (lower is better) Translates to: VILEPESEPGES*VRHTTHPLEHL Trigger: CAAGTGCTCAAGAGGGTGGGTGGTATGTCTAACTCAGCTTTCACCAGGCTCAGACTCAGGTTCTAAGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | GACTCTGGTTCCTTACCCTACACCTATATCATAGGATaGATGACAGCTTGTAGCTCTAGTTCCTGGGGACCC | + |
Preference number: 3 (lower is better) Translates to: DSGSLPYTYIIG*MTACSSSSWGP Trigger: GGGTCCCCAGGAACTAGAGCTACAAGCTGTCATGCATCCTATGATATAGGTGTAGGGTAAGGAACCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | CAGAATCATGTAGTACAAAAGAATGGACTAAAGGGCTaGCAGTTCTCCTCACTGGGAGGCCTGCTGAAGGTG | + |
Preference number: 3 (lower is better) Translates to: QNHVVQKNGLKG*QFSSLGGLLKV Trigger: CACCTTCAGCAGGCCTCCCAGTGAGGAGAACTGGCAGCCCTTTAGTCCATTCTTTTGTACTACATGATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | AAGTGGGTGATTATGGAGGTATTTCTCCTACATCCATaGCACCACATAGCAGATGAGGTATGGAGCCAGGCC | + |
Preference number: 3 (lower is better) Translates to: KWVIMEVFLLHP*HHIADEVWSQA Trigger: GGCCTGGCTCCATACCTCATCTGCTATGTGGTGGCATGGATGTAGGAGAAATACCTCCATAATCACCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CATTACCAAGTCCAGCCACAGCACAAGGTACAACCTTaGCTATCTCTGGAACACAGCCTCTGTGCTTTCAGA | + |
Preference number: 3 (lower is better) Translates to: HYQVQPQHKVQP*LSLEHSLCAFR Trigger: TCTGAAAGCACAGAGGCTGTGTTCCAGAGATAGCCAAGGTTGTACCTTGTGCTGTGGCTGGACTTGGTAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTTTCTCTGTGTAGCCTaGTGTGTCCTAGACTTTGCT | + |
Preference number: 3 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMFLCVA*CVLDFA Trigger: AGCAAAGTCTAGGACACACAAGGCTACACAGAGAAA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GATCCTTTTAGAGCTCCTTTGTGCGACAGAGCTGCATaGAGCTGTGGAGAGCACCTGGATATTAACAAAGGG | + |
Preference number: 3 (lower is better) Translates to: DPFRAPLCDRAA*SCGEHLDINKG Trigger: CCCTTTGTTAATATCCAGGTGCTCTCCACAGCTTCATGCAGCTCTGTCGCACAAAGGAGCTCTAAAAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTTCTAGCAATCAGACATaGGTTCAGAACAACCTCTGT | + |
Preference number: 3 (lower is better) Translates to: SYIYVRQGSGGVVRRPACSSNQT*VQNNLC Trigger: ACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAGA...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGTCACCAGGCTTCCTCTaGGATATATTATTTTTGTCC | + |
Preference number: 3 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMSPGFL*DILFLS Trigger: GGACAAAAATAATATATCCAAGAGGAAGCCTGGTGA...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | TTAGGAATCCTCTGGTTCTCAACTTCAAGGCAGCATTaGAAAGACTGCAGTTGTCAGCGTCACTCTGTCAGA | + |
Preference number: 3 (lower is better) Translates to: LGILWFSTSRQH*KDCSCQRHSVR Trigger: TCTGACAGAGTGACGCTGACAACTGCAGTCTTTGCAATGCTGCCTTGAAGTTGAGAACCAGAGGATTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CCTATAGAAAAGTTACATTTACGTCAGACAAGGAAGTaGAGGGGTGGTGAGGAGACCTGCTTGTCTTGCAGA | + |
Preference number: 3 (lower is better) Translates to: PIEKLHLRQTRK*RGGEETCLSCR Trigger: TCTGCAAGACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACTTTTCTATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | AACAGCCAGGTAGGCCTTACTTGCTCTAAAAGAAACTaGCCGCTCTTTGCTCTCTCTGACTCTCTTCTTTCT | + |
Preference number: 3 (lower is better) Translates to: NSQVGLTCSKRN*PLFALSDSLLS Trigger: AGAAAGAAGAGAGTCAGAGAGAGCAAAGAGCGGCCAGTTTCTTTTAGAGCAAGTAAGGCCTACCTGGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTTGCATGCTTACAATTTaGGTAGTGGTAAACCAGTTT | + |
Preference number: 3 (lower is better) Translates to: PVSQSHPPLPTFLSYEPACMLTI*VVVNQF Trigger: AAACTGGTTTACCACTACCAAAATTGTAAGCATGCA...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTTTACATCACTTCCTTTaGAGTCAAATGACACAGACT | + |
Preference number: 3 (lower is better) Translates to: PVSQSHPPLPTFLSYEPALHHFL*SQMTQT Trigger: AGTCTGTGTCATTTGACTCAAAAGGAAGTGATGTAA...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAGAGAGGAATAGGAAGTaGAAGGAAGACGGAGCACAA | + |
Preference number: 3 (lower is better) Translates to: PYRPQEARNYNNTVLHLRERNRK*KEDGAQ Trigger: TTGTGCTCCGTCTTCCTTCAACTTCCTATTCCTCTC...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GTCAGTCACTGGGTGTGGGATGATTTATTCAAGCCTTaGAAGGCACAGGGTATGCATGTGCTACACAGTTAT | + |
Preference number: 3 (lower is better) Translates to: VSHWVWDDLFKP*KAQGMHVLHSY Trigger: ATAACTGTGTAGCACATGCATACCCTGTGCCTTTCAAGGCTTGAATAAATCATCCCACACCCAGTGACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | AACCTCTGTAACTTCAGTCAGTCACTGGGTGTGGGATaGTTTATTCAAGCCTTGAAAGGCACAGGGTATGCA | + |
Preference number: 3 (lower is better) Translates to: NLCNFSQSLGVG*FIQALKGTGYA Trigger: TGCATACCCTGTGCCTTTCAAGGCTTGAATAAATCATCCCACACCCAGTGACTGACTGAAGTTACAGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | GTTTCCTCAAGAGTAGCTGCCTCCAACAAACTCAGGTaGTCATGTACTCAGGTGATCTCACTGATTGAACCT | + |
Preference number: 3 (lower is better) Translates to: VSSRVAASNKLR*SCTQVISLIEP Trigger: AGGTTCAATCAGTGAGATCACCTGAGTACATGATCACCTGAGTTTGTTGGAGGCAGCTACTCTTGAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | TTCTACGTCTTCATCCAAAAGCTACTAGTGGAAGACTaGCTTCCAGGTAACTGGGGTAAGAGTCTTAAGCCC | + |
Preference number: 3 (lower is better) Translates to: FYVFIQKLLVED*LPGNWGKSLKP Trigger: GGGCTTAAGACTCTTACCCCAGTTACCTGGAAGTCAGTCTTCCACTAGTAGCTTTTGGATGAAGACGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTCATGTCACTATCTTATaGTATGGATCCAATTTACGG | + |
Preference number: 3 (lower is better) Translates to: SYIYVRQGSGGVVRRPACHVTIL*YGSNLR Trigger: CCGTAAATTGGATCCATACAATAAGATAGTGACATG...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAAACTTCAAGGCAGCATaGCAAAGACTGCAGTTGTCA | + |
Preference number: 3 (lower is better) Translates to: PYRPQEARNYNNTVLHLRNFKAA*QRLQLS Trigger: TGACAACTGCAGTCTTTGCAATGCTGCCTTGAAGTT...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAAGACAGAAATGCTTCTaGAATTTGTGGGGTGACAGC | + |
Preference number: 3 (lower is better) Translates to: PYRPQEARNYNNTVLHLRRQKCF*NLWGDS Trigger: GCTGTCACCCCACAAATTCAAGAAGCATTTCTGTCT...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | CCTTTTGCCCAAACAGCTTTACTTAGAAATGTTCGTTaGAATGAGTCATTGGTCTGGTTGAGGCCTCTGACT | + |
Preference number: 3 (lower is better) Translates to: PFAQTALLRNVR*NESLVWLRPLT Trigger: AGTCAGAGGCCTCAACCAGACCAATGACTCATTGCAACGAACATTTCTAAGTAAAGCTGTTTGGGCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | ATAAGAGAGCATGTTGAAAGGAGTGGAGAGAATGTATaGACCAGGGGAGTATCAGACTTTTGTGATGGACCT | + |
Preference number: 3 (lower is better) Translates to: IREHVERSGENV*TRGVSDFCDGP Trigger: AGGTCCATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAACATGCTCTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | GCAAGCTCAGCTCAGTGTAGTACTCAGACATCAGCATaGCCTTTCATCTTCTACATCCTAGTTGTTATTACG | + |
Preference number: 3 (lower is better) Translates to: ASSAQCSTQTSA*PFIFYILVVIT Trigger: CGTAATAACAACTAGGATGTAGAAGATGAAAGGCCATGCTGATGTCTGAGTACTACACTGAGCTGAGCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | GCTTCTTTATATAAGGCATTGCTAGATACCCAGGGTTaGGAATTATCCAGTAAGAGCTGCACCCTCCCATAT | + |
Preference number: 3 (lower is better) Translates to: ASLYKALLDTQG*ELSSKSCTLPY Trigger: ATATGGGAGGGTGCAGCTCTTACTGGATAATTCCCAACCCTGGGTATCTAGCAATGCCTTATATAAAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | TCAAAAGCAAAAATCAATCTCCAACTGTCCAATGTCTaGGATCCAACTCACGATCTTCTGGGCTCCTTCAAG | + |
Preference number: 3 (lower is better) Translates to: SKAKINLQLSNV*DPTHDLLGSFK Trigger: CTTGAAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACATTGGACAGTTGGAGATTGATTTTTGCTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | TCACTCTGTCAGAAAAGTGTGCAGTGTCTTGGCCCATaGAGTGCAGCTTTCTTCTTCCATAGTTATTACCTT | + |
Preference number: 3 (lower is better) Translates to: SLCQKSVQCLGP*SAAFFFHSYYL Trigger: AAGGTAATAACTATGGAAGAAGAAAGCTGCACTTCATGGGCCAAGACACTGCACACTTTTCTGACAGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | AACATGGAGACAGAAATGCTTCTTGAATTTGTGGGGTaGCAGCCAGTAGTCTTGTTCCCAATCTTTCTGGTA | + |
Preference number: 3 (lower is better) Translates to: NMETEMLLEFVG*QPVVLFPIFLV Trigger: TACCAGAAAGATTGGGAACAAGACTACTGGCTGTCACCCCACAAATTCAAGAAGCATTTCTGTCTCCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CCAGAGAAGACAGGTTCATTTCTAGCAATCAGACATTaGTTCAGAACAACCTCTGTAACTTCAGTCAGTCAC | + |
Preference number: 3 (lower is better) Translates to: PEKTGSFLAIRH*FRTTSVTSVSH Trigger: GTGACTGACTGAAGTTACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAGAAATGAACCTGTCTTCTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | AGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTaGTTCTCAACTTCAAGGCAGCATTGCAAAGACTGC | + |
Preference number: 3 (lower is better) Translates to: SFPVCICTLGIL*FSTSRQHCKDC Trigger: GCAGTCTTTGCAATGCTGCCTTGAAGTTGAGAACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | TCCTACACAACATCTGACAGAGCTCTTAACACTGAATaGATCTTCTATCCCAAAGTTCCAAAGTCCTTCCAC | + |
Preference number: 3 (lower is better) Translates to: SYTTSDRALNTE*IFYPKVPKSFH Trigger: GTGGAAGGACTTTGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCTACTTAGCAGACAATTaGAAGTCCAAAATACCCTGG | + |
Preference number: 3 (lower is better) Translates to: KFWDEKHGIPEARLPEVFYLADN*KSKIPW Trigger: CCAGGGTATTTTGGACTTCAAATTGTCTGCTAAGTA...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTGAAACTGGCCGCTCTTaGCTCTCTCTGACTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFETGRS*LSLTLF Trigger: GAAGAGAGTCAGAGAGAGCAAAGAGCGGCCAGTTTC...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGACTTCCCAGTTTGTATTaGTACTTTAGGAATCCTCTG | + |
Preference number: 3 (lower is better) Translates to: PYRPQEARNYNNTVLHLRLPSLY*YFRNPL Trigger: CAGAGGATTCCTAAAGTACAAATACAAACTGGGAAG...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | TCAGATTCAGCATCTAAAGATAATAAGAGAGCATGTTaGAAGGAGTGGAGAGAATGTATGGACCAGGGGAGT | + |
Preference number: 3 (lower is better) Translates to: SDSASKDNKRAC*KEWRECMDQGS Trigger: ACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAACATGCTCTCTTATTATCTTTAGATGCTGAATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | AGGACCTTTGAGAAAGATAAGAGAGTGTCTGTCTCTTaGCACAGAAACTCAGAGGAATGGCTATCTCACAAT | + |
Preference number: 3 (lower is better) Translates to: RTFEKDKRVSVS*HRNSEEWLSHN Trigger: ATTGTGAGATAGCCATTCCTCTGAGTTTCTGTGTCAAGAGACAGACACTCTCTTATCTTTCTCAAAGGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR GCA 72 bp | TATCCAGTAAGAGCTGCACCCTCCCATATCAACCATTaGTTAAGAAAATACCCCACTAACTTGTCTATAGTC | + |
Preference number: 3 (lower is better) Translates to: YPVRAAPSHINH*LRKYPTNLSIV Trigger: GACTATAGACAAGTTAGTGGGGTATTTTCTTAAGCAATGGTTGATATGGGAGGGTGCAGCTCTTACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CCAATGAAGTGGTCCAGGGCATTTAAGTTCTGTGACTaGTACATTTGGCTTCTATTGACTGAATTCACAGTA | + |
Preference number: 3 (lower is better) Translates to: PMKWSRAFKFCD*YIWLLLTEFTV Trigger: TACTGTGAATTCAGTCAATAGAAGCCAAATGTACCAGTCACAGAACTTAAATGCCCTGGACCACTTCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | TTGACACAGAAACTCAGAGGAATGGCTATCTCACAATaGCTCTCTCAGCTTGCTTCTTTATATAAGGCATTG | + |
Preference number: 3 (lower is better) Translates to: LTQKLRGMAISQ*LSQLASLYKAL Trigger: CAATGCCTTATATAAAGAAGCAAGCTGAGAGAGCCATTGTGAGATAGCCATTCCTCTGAGTTTCTGTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGAGTTACTCAAAATGTTTaGTGTACACAGTGCCATCAA | + |
Preference number: 3 (lower is better) Translates to: PYRPQEARNYNNTVLHLRVTQNV*CTQCHQ Trigger: TTGATGGCACTGTGTACACAAAACATTTTGAGTAAC...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTTTTAGTCCTCGTACTTaGGAAGCAGAGGCTGGCAGA | + |
Preference number: 3 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFFSPRT*EAEAGR Trigger: TCTGCCAGCCTCTGCTTCCAAAGTACGAGGACTAAA...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACCATCACAAGGACCTTaGAGAAAGATAAGAGAGTGT | + |
Preference number: 3 (lower is better) Translates to: TTSDRALNTEWIFYPKVPPSQGP*RKIREC Trigger: ACACTCTCTTATCTTTCTCAAAGGTCCTTGTGATGG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGTACTTAGCAGACAATTaGAAGTCCAAAATACCCTGG | + |
Preference number: 3 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLYLADN*KSKIPW Trigger: CCAGGGTATTTTGGACTTCAAATTGTCTGCTAAGTA...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAAATGGCTCTCTCAGCTaGCTTCTTTATATAAGGCAT | + |
Preference number: 3 (lower is better) Translates to: TTSDRALNTEWIFYPKVPNGSLS*LLYIRH Trigger: ATGCCTTATATAAAGAAGCAAGCTGAGAGAGCCATT...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR TCA 72 bp | AACACAGGGAAAACACATCCTAAGTTTGTCTGTTGCTaGACATGGAGACAGAAATGCTTCTTGAATTTGTGG | + |
Preference number: 3 (lower is better) Translates to: NTGKTHPKFVCC*TWRQKCFLNLW Trigger: CCACAAATTCAAGAAGCATTTCTGTCTCCATGTTCAGCAACAGACAAACTTAGGATGTGTTTTCCCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | TCAATACAGTACACACTCGTTACTCAAAATGTTTTGTGTACACAGTGCCATCAATGCTTAAAGTGCTATTaGGGTATGTCTTACCCACAG | + |
Preference number: 3 (lower is better) Translates to: SIQYTLVTQNVLCTQCHQCLKCY*GMSYPQ Trigger: CTGTGGGTAAGACATACCCAAATAGCACTTTAAGCA...TTGATGGCACTGTGTACACAAAACATTTTGAGTAACGAGTGTGTACTGTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | TCAATACAGTACACACTCGTTACTCAAAATGTTTTGTGTACACAGTGCCATCAATCTAGCAATCAGACATaGGTTCAGAACAACCTCTGT | + |
Preference number: 3 (lower is better) Translates to: SIQYTLVTQNVLCTQCHQSSNQT*VQNNLC Trigger: ACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAGA...TTGATGGCACTGTGTACACAAAACATTTTGAGTAACGAGTGTGTACTGTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CCA 72 bp | CCTAATAAACGAGACCTTGATAGGTTGATATCTACTTaGTCCTCCGACTTTCTTTCTTTTATTCCCATTTCC | + |
Preference number: 3 (lower is better) Translates to: PNKRDLDRLIST*SSDFLSFIPIS Trigger: GGAAATGGGAATAAAAGAAAGAAAGTCGGAGGACCAAGTAGATATCAACCTATCAAGGTCTCGTTTATTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCAGTTTTACAAATCCTaGTTAGTCCCATTTTCTCAG | + |
Preference number: 3 (lower is better) Translates to: YTTSDRALNTEWIFYPKVQFYKS*LVPFSQ Trigger: CTGAGAAAATGGGACTAACAAGGATTTGTAAAACTG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCATGTCACTATCTTATaGTATGGATCCAATTTACGG | + |
Preference number: 3 (lower is better) Translates to: YTTSDRALNTEWIFYPKVHVTIL*YGSNLR Trigger: CCGTAAATTGGATCCATACAATAAGATAGTGACATG...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CCA 72 bp | TGGTCCAGGGCATTTAAGTTCTGTGACTGGTACATTTaGCTTCTATTGACTGAATTCACAGTAAATATCATT | + |
Preference number: 3 (lower is better) Translates to: WSRAFKFCDWYI*LLLTEFTVNII Trigger: AATGATATTTACTGTGAATTCAGTCAATAGAAGCCAAATGTACCAGTCACAGAACTTAAATGCCCTGGACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR-3UTR CAA 90 bp | TCAATACAGTACACACTCGTTACTCAAAATGTTTTGTGTACACAGTGCCATCAATGCATGCTTACAATTTaGGTAGTGGTAAACCAGTTT | + |
Preference number: 3 (lower is better) Translates to: SIQYTLVTQNVLCTQCHQCMLTI*VVVNQF Trigger: AAACTGGTTTACCACTACCAAAATTGTAAGCATGCA...TTGATGGCACTGTGTACACAAAACATTTTGAGTAACGAGTGTGTACTGTATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR-3UTR CAA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTTTACATCACTTCCTTTaGAGTCAAATGACACAGACT | + |
Preference number: 3 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFLHHFL*SQMTQT Trigger: AGTCTGTGTCATTTGACTCAAAAGGAAGTGATGTAA...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR TCA 72 bp | AAAGCTCAGGGGTATTCATTAATAAAGGTAAACCAGTaGATGCTTAATGATTGTGTTACAGATTGGAAGTTG | + |
Preference number: 3 (lower is better) Translates to: KAQGYSLIKVNQ*MLNDCVTDWKL Trigger: CAACTTCCAATCTGTAACACAATCATTAAGCATTCACTGGTTTACCTTTATTAATGAATACCCCTGAGCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | CTGTCTTGCACCCACCCCACCAGAGCCACCTCTACCTaGCTGCCTAGGAGAAGGGCAGGGATAGATCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LSCTHPTRATST*LPRRRAGIDLL Trigger: CAGGAGATCTATCCCTGCCCTTCTCCTAGGCAGCAAGGTAGAGGTGGCTCTGGTGGGGTGGGTGCAAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTGTGCCATGCAGACTTTaGCCTGAGTCTCCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: GLLKVSAGSGYQGKASQFVPCRL*PESPPP Trigger: GGGTGGAGGAGACTCAGGCCAAAGTCTGCATGGCAC...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | CGATGTTCCAGAGATAAGATCCAGAGTGCCCGCTGCTaGGCACCTGACTTCGGCCCCCATGTCAGCAGTTGC | + |
Preference number: 4 (lower is better) Translates to: RCSRDKIQSARC*APDFGPHVSSC Trigger: GCAACTGCTGACATGGGGGCCGAAGTCAGGTGCCAAGCAGCGGGCACTCTGGATCTTATCTCTGGAACATCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | GATCCAACTCACGATCTTCTGGGCTCCTTCAAGGGCTaGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACA | + |
Preference number: 4 (lower is better) Translates to: DPTHDLLGSFKG*GHFSSHALCST Trigger: TGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGAAGGAGCCCAGAAGATCGTGAGTTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR GCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTAAAGGGGCAAAAAGTTaGATAACCAAGGGCCAGAAA | + |
Preference number: 4 (lower is better) Translates to: GLLKVSAGSGYQGKASQFKGAKS*ITKGQK Trigger: TTTCTGGCCCTTGGTTATGCAACTTTTTGCCCCTTT...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR GCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTTTCTGCCACAGAGCATaGCAAAATTTAACCAAAGGC | + |
Preference number: 4 (lower is better) Translates to: GLLKVSAGSGYQGKASQFFCHRA*QNLTKG Trigger: GCCTTTGGTTAAATTTTGGCATGCTCTGTGGCAGAA...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CAA 72 bp | CATGGCAGCATCCAGGCTGTCATGGCACAGGCAGAGTaGGGAGTTCTACGTCTTCATCCAAAAGCTACTAGT | + |
Preference number: 4 (lower is better) Translates to: HGSIQAVMAQAE*GVLRLHPKATS Trigger: ACTAGTAGCTTTTGGATGAAGACGTAGAACTCCCAACTCTGCCTGTGCCATGACAGCCTGGATGCTGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
CDS-3UTR TCA 90 bp | GCTACCAGGGTAAAGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTGGTTATGCAGACTTTGGCCTaGGTCTCCTCCACCCAGATG | + |
Preference number: 4 (lower is better) Translates to: ATRVKLPSLYLYFRNPLVMQTLA*VSSTQM Trigger: CATCTGGGTGGAGGAGACTCAGGCCAAAGTCTGCAT...AACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | GGCCTGCTGAAGGTGAGTGCTGGGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTCTCAGGACCATGAGATaGAGAACAATCAATTTTATT | + |
Preference number: 4 (lower is better) Translates to: GLLKVSAGSGYQGKASQFLRTMR*RTINFI Trigger: AATAAAATTGATTGTTCTCCATCTCATGGTCCTGAG...AAACTGGGAAGCTTTACCCTGGTAGCCTGACCCAGCACTCACCTTCAGCAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
CDS-3UTR TCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGGGCTTCCCCAACAACTaGATGTATAATTCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMGFPNN*MYNSQK Trigger: TTTCTGTGAATTATACATTCAGTTGTTGGGGAAGCC...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
CDS-3UTR TCA 90 bp | GCTACCAGGGTAAAGCTTCCCAGTTTGTATTTGTACTTTAGGAATCCTCTGGTTCAAAGGCCATCCCTGTaGATCAGCACAAAGGGGCAA | + |
Preference number: 4 (lower is better) Translates to: ATRVKLPSLYLYFRNPLVQRPSL*ISTKGQ Trigger: TTGCCCCTTTGTGCTGATTCACAGGGATGGCCTTTG...AACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CAA 72 bp | TGTCAGCGTCACTCTGTCAGAAAAGTGTGCAGTGTCTaGGCCCATGAAGTGCAGCTTTCTTCTTCCATAGTT | + |
Preference number: 4 (lower is better) Translates to: CQRHSVRKVCSV*AHEVQLSSSIV Trigger: AACTATGGAAGAAGAAAGCTGCACTTCATGGGCCAAGACACTGCACACTTTTCTGACAGAGTGACGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
||
3UTR CAA 72 bp | TTTAGGAATCCTCTGGTTCTCAACTTCAAGGCAGCATaGCAAAGACTGCAGTTGTCAGCGTCACTCTGTCAG | + |
Preference number: 4 (lower is better) Translates to: FRNPLVLNFKAA*QRLQLSASLCQ Trigger: CTGACAGAGTGACGCTGACAACTGCAGTCTTTGCAATGCTGCCTTGAAGTTGAGAACCAGAGGATTCCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTGGCTTCCCCAACAACTaGATGTATAATTCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: SYIYVRQGSGGVVRRPACGFPNN*MYNSQK Trigger: TTTCTGTGAATTATACATTCAGTTGTTGGGGAAGCC...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACAAAGGCCATCCCTGTaGATCAGCACAAAGGGGCAA | + |
Preference number: 4 (lower is better) Translates to: TTSDRALNTEWIFYPKVPQRPSL*ISTKGQ Trigger: TTGCCCCTTTGTGCTGATTCACAGGGATGGCCTTTG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | AGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTaGCACCTAAGAACTGGCCACTCTTTGCTCTCTCTA | + |
Preference number: 4 (lower is better) Translates to: RPQEARNYNNTV*HLRTGHSLLSL Trigger: TAGAGAGAGCAAAGAGTGGCCAGTTCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | CCAGTTTCCCAGAGCCATCCTCCTCTGCCCACATTTCTAAGCTATGAACCAGCTTTTGTAAAAGCCATGTaGATCAGAATGAGGTATATG | + |
Preference number: 4 (lower is better) Translates to: PVSQSHPPLPTFLSYEPAFVKAM*IRMRYM Trigger: CATATACCTCATTCTGATCCACATGGCTTTTACAAA...AGCTGGTTCATAGCTTAGAAATGTGGGCAGAGGAGGATGGCTCTGGGAAACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTGTGCCATGCAGACTTTaGCCTGAGTCTCCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFVPCRL*PESPPP Trigger: GGGTGGAGGAGACTCAGGCCAAAGTCTGCATGGCAC...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTGTGCTTCTAATGGAATaGATTAGGTTCGTACTGATT | + |
Preference number: 4 (lower is better) Translates to: SYIYVRQGSGGVVRRPACVLLME*IRFVLI Trigger: AATCAGTACGAACCTAATCCATTCCATTAGAAGCAC...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | TACTTGGGGCTGGCTTACAGGTTCACAGTCCATTGTCATCAAGGTGGGAGCATGCTCAGGACCATGAGATaGAGAACAATCAATTTTATT | + |
Preference number: 4 (lower is better) Translates to: YLGLAYRFTVHCHQGGSMLRTMR*RTINFI Trigger: AATAAAATTGATTGTTCTCCATCTCATGGTCCTGAG...CATGCTCCCACCTTGATGACAATGGACTGTGAACCTGTAAGCCAGCCCCAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | GGTCAGGCTACCAGGGTAAAGCTTCCCAGTTTGTATTaGTACTTTAGGAATCCTCTGGTTCTCAACTTCAAG | + |
Preference number: 4 (lower is better) Translates to: GQATRVKLPSLY*YFRNPLVLNFK Trigger: CTTGAAGTTGAGAACCAGAGGATTCCTAAAGTACAAATACAAACTGGGAAGCTTTACCCTGGTAGCCTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | CCCTATAGGCCTCAGGAAGCCAGAAACTATAATAACACTGTCTTGCACCTAAGACATCTCTCAGGACCATaGGATGGAGAACAATCAATT | + |
Preference number: 4 (lower is better) Translates to: PYRPQEARNYNNTVLHLRHLSGP*DGEQSI Trigger: AATTGATTGTTCTCCATCTCATGGTCCTGAGAGATG...TCTTAGGTGCAAGACAGTGTTATTATAGTTTCTGGCTTCCTGAGGCCTATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | AAATTCTGGGATGAAAAGCATGGAATTCCAGAAGCCAGGCTTCCAGAGGTTTTCCATCTCTCAGGACCATaGGATGGAGAACAATCAATT | + |
Preference number: 4 (lower is better) Translates to: KFWDEKHGIPEARLPEVFHLSGP*DGEQSI Trigger: AATTGATTGTTCTCCATCTCATGGTCCTGAGAGATG...GAAAACCTCTGGAAGCCTGGCTTCTGGAATTCCATGCTTTTCATCCCAGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CCA 90 bp | AGTTACATTTACGTCAGACAAGGAAGTGGAGGGGTGGTGAGGAGACCTGCTTGTTTTGTAAAAGCCATGTaGATCAGAATGAGGTATATG | + |
Preference number: 4 (lower is better) Translates to: SYIYVRQGSGGVVRRPACFVKAM*IRMRYM Trigger: CATATACCTCATTCTGATCCACATGGCTTTTACAAA...ACAAGCAGGTCTCCTCACCACCCCTCCACTTCCTTGTCTGACGTAAATGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | ACCTGGATATTAACAAAGGGCAGCTGCAAAGCAGGCTaGCTTGGCTTCAGTCACTCATTGATTCATTTTGAA | + |
Preference number: 4 (lower is better) Translates to: TWILTKGSCKAG*LGFSHSLIHFE Trigger: TTCAAAATGAATCAATGAGTGACTGAAGCCAAGCAAGCCTGCTTTGCAGCTGCCCTTTGTTAATATCCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | CAATGGCTCTCTCAGCTTGCTTCTTTATATAAGGCATaGCTAGATACCCAGGGTTGGGAATTATCCAGTAAG | + |
Preference number: 4 (lower is better) Translates to: QWLSQLASLYKA*LDTQGWELSSK Trigger: CTTACTGGATAATTCCCAACCCTGGGTATCTAGCAATGCCTTATATAAAGAAGCAAGCTGAGAGAGCCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | TCCAGAGAAGACAGGTTCATTTCTAGCAATCAGACATaGGTTCAGAACAACCTCTGTAACTTCAGTCAGTCA | + |
Preference number: 4 (lower is better) Translates to: SREDRFISSNQT*VQNNLCNFSQS Trigger: TGACTGACTGAAGTTACAGAGGTTGTTCTGAACCAATGTCTGATTGCTAGAAATGAACCTGTCTTCTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCACCATGTGGATCAGAATaGGGTATATGGGTTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: TTSDRALNTEWIFYPKVPPCGSE*GIWVSS Trigger: AGAAGAAACCCATATACCTCATTCTGATCCACATGG...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR GCA 90 bp | ACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTCCAAAAGGGGCAAAAAGTTaGATAACCAAGGGCCAGAAA | + |
Preference number: 4 (lower is better) Translates to: TTSDRALNTEWIFYPKVPKGAKS*ITKGQK Trigger: TTTCTGGCCCTTGGTTATGCAACTTTTTGCCCCTTT...TGGAACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR GCA 90 bp | TCAATACAGTACACACTCGTTACTCAAAATGTTTTGTGTACACAGTGCCATCAATCTCAAACCAAAGGCTaGTATTGTCTTAGGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: SIQYTLVTQNVLCTQCHQSQTKG*YCLRQS Trigger: GGACTGCCTAAGACAATAGCAGCCTTTGGTTTGAGA...TTGATGGCACTGTGTACACAAAACATTTTGAGTAACGAGTGTGTACTGTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR GCA 90 bp | TACACAACATCTGACAGAGCTCTTAACACTGAATGGATCTTCTATCCCAAAGTTTTCTGCCACAGAGCATaGCAAAATTTAACCAAAGGC | + |
Preference number: 4 (lower is better) Translates to: YTTSDRALNTEWIFYPKVFCHRA*QNLTKG Trigger: GCCTTTGGTTAAATTTTGGCATGCTCTGTGGCAGAA...AACTTTGGGATAGAAGATCCATTCAGTGTTAAGAGCTCTGTCAGATGTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | GATTGTCTGAAGATAAACACATGCTTAAAGTGCTATTaGGGTATGTCTTACCCACAGTATTGTAGAACGGAG | + |
Preference number: 4 (lower is better) Translates to: DCLKINTCLKCY*GMSYPQYCRTE Trigger: CTCCGTTCTACAATACTGTGGGTAAGACATACCCAAATAGCACTTTAAGCATGTGTTTATCTTCAGACAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR TCA 90 bp | CTCTCTAGGAGGCAGGTAATGTTTGACTTTGGTTATTATTGCCTTTCAATTTTTCCATGTGGATCAGAATaGGGTATATGGGTTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: LSRRQVMFDFGYYCLSIFPCGSE*GIWVSS Trigger: AGAAGAAACCCATATACCTCATTCTGATCCACATGG...AAAAATTGAAAGGCAATAATAACCAAAGTCAAACATTACCTGCCTCCTAGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | CATAATTTGCAGACAGGTTTTACACAGTATACCCTTTaGCCCAAACAGCTTTACTTAGAAATGTTCGTTGCA | + |
Preference number: 4 (lower is better) Translates to: HNLQTGFTQYTL*PKQLYLEMFVA Trigger: TGCAACGAACATTTCTAAGTAAAGCTGTTTGGGCAAAAGGGTATACTGTGTAAAACCTGTCTGCAAATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | GTAATGCAAAGTTTTTGCTTTAGTAGTTCTGGTATCTaGTTAATCATAGCTGATTCTTCAGCCCCAGCTAAC | + |
Preference number: 4 (lower is better) Translates to: VMQSFCFSSSGI*LIIADSSAPAN Trigger: GTTAGCTGGGGCTGAAGAATCAGCTATGATTAACAAGATACCAGAACTACTAAAGCAAAAACTTTGCATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | ACAATATTAAAAACACAGGGAAAACACATCCTAAGTTaGTCTGTTGCTGAACATGGAGACAGAAATGCTTCT | + |
Preference number: 4 (lower is better) Translates to: TILKTQGKHILS*SVAEHGDRNAS Trigger: AGAAGCATTTCTGTCTCCATGTTCAGCAACAGACAAACTTAGGATGTGTTTTCCCTGTGTTTTTAATATTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | GTCTATAGTCCATTCTTGATAAGAACAATTTCTCAATaGAGGTTCCTCTTTCTGGATGATCCTAATGTGTGT | + |
Preference number: 4 (lower is better) Translates to: VYSPFLIRTISQ*RFLFLDDPNVC Trigger: ACACACATTAGGATCATCCAGAAAGAGGAACCTCAATTGAGAAATTGTTCTTATCAAGAATGGACTATAGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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3UTR CAA 72 bp | TACAGTATTAATACTGAATTCTCACCAGGCTTCCTCTaGGATATATTATTTTTGTCCTGGGTCATAGAGATA | + |
Preference number: 4 (lower is better) Translates to: YSINTEFSPGFL*DILFLSWVIEI Trigger: TATCTCTATGACCCAGGACAAAAATAATATATCCAAGAGGAAGCCTGGTGAGAATTCAGTATTAATACTGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS CCA 90 bp | CACTTTGAGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGGTGCTTGTGGAGAA | + |
Preference number: 5 (lower is better) Translates to: HFEQLSAQGEFCREA*SSEGRGHAGGACGE Trigger: TTCTCCACAAGCACCACCAGCATGTCCTCTACCTTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCTCAAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CAA 90 bp | GTTGAAAGGAGTGGAGAGAATGTATGGACCAGGGGAGTATCAGACTTTTGTGATCAGAAGGAAGACACTTaGAGCAGCTCTCAGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: VERSGENVWTRGVSDFCDQKEDT*SSSQLR Trigger: CCTGAGCTGAGAGCTGCTCAAAGTGTCTTCCTTCTG...ATCACAAAAGTCTGATACTCCCCTGGTCCATACATTCTCTCCACTCCTTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS-3UTR CAA 90 bp | GTTACAGATTGGAAGTTGTTAAAAATGACTACCCATAAGCCAGGTGTGGTACTGCAGAAGGAAGACACTTaGAGCAGCTCTCAGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: VTDWKLLKMTTHKPGVVLQKEDT*SSSQLR Trigger: CCTGAGCTGAGAGCTGCTCAAAGTGTCTTCCTTCTG...CAGTACCACACCTGGCTTATGGGTAGTCATTTTTAACAACTTCCAATCTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS GCA 90 bp | ATTAAAGCATTGAGTATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGTCTCCTCCACCCAGATGTTCTG | + |
Preference number: 5 (lower is better) Translates to: IKALSIQKNEKNGRM*HADFGLSLLHPDVL Trigger: CAGAACATCTGGGTGGAGGAGACTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATACTCAATGCTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS GCA 72 bp | GTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGGACCATGAGATGGAGAACAATCAA | + |
Preference number: 6 (lower is better) Translates to: VATGPSHGTLKH*ISQDHEMENNQ Trigger: TTGATTGTTCTCCATCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS GCA 72 bp | TTGAGTATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGTCTCCTCCACCCA | + |
Preference number: 6 (lower is better) Translates to: LSIQKNEKNGRM*HADFGLSLLHP Trigger: TGGGTGGAGGAGACTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS TCA 72 bp | GGTATATGGGTTTCTTCTCAGGGCTTCCCCAACAACTaGATGTATAATTCACAGAAACAGACATGTTCCCCA | + |
Preference number: 6 (lower is better) Translates to: GIWVSSQGFPNN*MYNSQKQTCSP Trigger: TGGGGAACATGTCTGTTTCTGTGAATTATACATTCAGTTGTTGGGGAAGCCCTGAGAAGAAACCCATATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |
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CDS CCA 72 bp | TTTGCAAGAAGGATTAGAATGTTTGTAAAAGCCATGTaGATCAGAATGAGGTATATGGGTTTCTTCTCAGGG | + |
Preference number: 6 (lower is better) Translates to: FARRIRMFVKAM*IRMRYMGFFSG Trigger: CCCTGAGAAGAAACCCATATACCTCATTCTGATCCACATGGCTTTTACAAACATTCTAATCCTTCTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091729.2 ENSMUST00000227520.2 ENSMUST00000228889.2 |