Pregenerated sensors for VMN1R201 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094898Ensembl transcript IDs: ENSMUST00000091730.2, ENSMUST00000226330.2, ENSMUST00000226965.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCAGCCCTGCTCACCTACCCACTCACTCCCACTTCTTGGCCCTaGCTTTTCCCTGTACTGGTGCTTATAAAGTTTGCTAGACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: PPALLTYPLTPTSWP*LFPVLVLIKFARPR Trigger: CCTTGGTCTAGCAAACTTTATAAGCACCAGTACAGGGAAAAGCCAGGGCCAAGAAGTGGGAGTGAGTGGGTAGGTGAGCAGGGCTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | GGCCCTGTGTTCCATCCTATGACTGTGAGCATCCACTTCTGTATTTaGCAGGCACTGGAAAAGCCTCACAGGAGACAGCTATATCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GPVFHPMTVSIHFCI*QALEKPHRRQLYQG Trigger: ACCCTGATATAGCTGTCTCCTGTGAGGCTTTTCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATAGGATGGAACACAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | ATGGCAAAAGTCAGTTTTGAAGGGAATGTCTGTAATCGCAGCCTTTaGCATTCCAAGGCACCTCAAGGGCAGACTGTGCTACCTACAGGC | + |
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Preference number: 1 (lower is better) Translates to: MAKVSFEGNVCNRSL*HSKAPQGQTVLPTG Trigger: GCCTGTAGGTAGCACAGTCTGCCCTTGAGGTGCCTTGGAATGCCAAAGGCTGCGATTACAGACATTCCCTTCAAAACTGACTTTTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR TCA 90 bp | GAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACATaGATTTTTGATCCTAGCCATTCTGATTGGTGTGAGGTGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: ECSSFSTSSPASAVT*IFDPSHSDWCEVEP Trigger: AGGTTCCACCTCACACCAATCAGAATGGCTAGGATCAAAAATTCATGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR TCA 90 bp | CTGGTGCTTATAAAGTTTGCTAGACCAAGGGGCCTCTCTTCCCAATaGTGGCCAACTACGCCATCTTCTGCTACATATGCAACTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LVLIKFARPRGLSSQ*WPTTPSSATYATRD Trigger: GTCTCTAGTTGCATATGTAGCAGAAGATGGCGTAGTTGGCCATCATTGGGAAGAGAGGCCCCTTGGTCTAGCAAACTTTATAAGCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | TGCTCTAGTGACTTCATTTGTCTTACTGTTGTCTTCACTCTGCCCTaGAAGCTCAGCTCAGATAAGTCACCTCCTTGCATCCACCTACAC | + |
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Preference number: 1 (lower is better) Translates to: CSSDFICLTVVFTLP*KLSSDKSPPCIHLH Trigger: GTGTAGGTGGATGCAAGGAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGAAGTCACTAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | ACAAGTGCTCTAGTGACTTCATTTGTCTTACTGTTGTCTTCACTCTaGCCTGCAAGCTCAGCTCAGATAAGTCACCTCCTTGCATCCACC | + |
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Preference number: 1 (lower is better) Translates to: TSALVTSFVLLLSSL*PASSAQISHLLAST Trigger: GGTGGATGCAAGGAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGAAGTCACTAGAGCACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | CTGGCATTATGCAATAGTGTCTGTGTTTGGTGGCTGATTATGGGATaGACCACCATGTGGGGCAGTTTCTGGATGGTCTGTCTTTTCATC | + |
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Preference number: 1 (lower is better) Translates to: LALCNSVCVWWLIMG*TTMWGSFWMVCLFI Trigger: GATGAAAAGACAGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR TCA 90 bp | GCAAAATCTTTCTGGCATTATGCAATAGTGTCTGTGTTTGGTGGCTaGTTATGGGATGGACCACCATGTGGGGCAGTTTCTGGATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: AKSFWHYAIVSVFGG*LWDGPPCGAVSGWS Trigger: AGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAGAAAGATTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | GTTTGGTGGCTGATTATGGGATGGACCACCATGTGGGGCAGTTTCTaGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: VWWLIMGWTTMWGSF*MVCLFILAPNFLFA Trigger: TGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | AATAGTGTCTGTGTTTGGTGGCTGATTATGGGATGGACCACCATGTaGGGCAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: NSVCVWWLIMGWTTM*GSFWMVCLFILAPN Trigger: GTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | AGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTTCTGGCATTATaGAATAGTGTCTGTGTTTGGTGGCTGATTATGGGATGGACCACC | + |
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Preference number: 1 (lower is better) Translates to: RQLYQGPFSKIFLAL*NSVCVWWLIMGWTT Trigger: GGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAGAAAGATTTTGCTGAAAGGACCCTGATATAGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | CTTGGATATTCTAGGTTTCTGGATCAATATCCACTGATCACTGAGTaGATATCAAGTGACTTATTTTGTGATTGGGTTACCTCACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LGYSRFLDQYPLITE*ISSDLFCDWVTSLR Trigger: CCTGAGTGAGGTAACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTGATCCAGAAACCTAGAATATCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | ATGATTAAGGATGTTGAACATTTTTGCACGTGCTTCTCAGCCCTTTaGTATTCCTCAGATGAGAATTCTTTGTTTAGCTCTGTATCCCAT | + |
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Preference number: 1 (lower is better) Translates to: MIKDVEHFCTCFSAL*YSSDENSLFSSVSH Trigger: ATGGGATACAGAGCTAAACAAAGAATTCTCATCTGAGGAATACCAAAGGGCTGAGAAGCACGTGCAAAAATGTTCAACATCCTTAATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR GCA 90 bp | TTTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTGCACGTaGTTCTCAGCCCTTTGGTATTCCTCAGATGAGAATTCTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: FCISLMIKDVEHFCT*FSALWYSSDENSLF Trigger: AAACAAAGAATTCTCATCTGAGGAATACCAAAGGGCTGAGAAGCACGTGCAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | TATCCACTGATCACTGAGTGCATATCAAGTGACTTATTTTGTGATTaGGTTACCTCACTCAGGATTATATCCTTCAGATACATCCATTTG | + |
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Preference number: 1 (lower is better) Translates to: YPLITECISSDLFCD*VTSLRIISFRYIHL Trigger: CAAATGGATGTATCTGAAGGATATAATCCTGAGTGAGGTAACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR TCA 90 bp | GGAAGTTGTATCTTGGATATTCTAGGTTTCTGGATCAATATCCACTaGTCACTGAGTGCATATCAAGTGACTTATTTTGTGATTGGGTTA | + |
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Preference number: 1 (lower is better) Translates to: GSCILDILGFWINIH*SLSAYQVTYFVIGL Trigger: TAACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTGATCCAGAAACCTAGAATATCCAAGATACAACTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CCA 90 bp | GTAAGTATCCACGAGTTGGTCTTCCTTCTTGATTTTCTTGTGTTTTaGAAGTTGTATCTTGGATATTCTAGGTTTCTGGATCAATATCCA | + |
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Preference number: 1 (lower is better) Translates to: VSIHELVFLLDFLVF*KLYLGYSRFLDQYP Trigger: TGGATATTGATCCAGAAACCTAGAATATCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAACTCGTGGATACTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCTCTGCATCCCTTCAAGAGTGGCACTCACATATGTCAGAGCAGTCAGGGCTCCCTCAGTACTCTaGTTCCCTTCTCTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGLCIPSRVALTYVRAVRAPSVL*FPSLWA Trigger: GGCCCACAGAGAAGGGAACCAGAGTACTGAGGGAGC...CCTGACTGCTCTGACATATGTGAGTGCCACTCTTGAAGGGATGCAGAGCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCGTCTTCACTCTGCCCTaGAAGCTCAGCTCAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: EAKIGSFGEHPTRALHPFVFTLP*KLSSDK Trigger: CTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGAC...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTGTTCCAACTATAGGGTTGCAGACCCCTTCAGCTCTTGGGTACTTTCTCTGTGCCAGTGAAGCCTaGCCAAGAGCTGCGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: TVVPTIGLQTPSALGYFLCASEA*PRAAMA Trigger: TGCCATCGCAGCTCTTGGCCAGGCTTCACTGGCACA...GAGAAAGTACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGTTGGAACAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGTGTGCCAGTGAAGCCTaGCCAAGAGCTGCGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQCASEA*PRAAMA Trigger: TGCCATCGCAGCTCTTGGCCAGGCTTCACTGGCACA...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCAATTTCTGGACCCTCTaGGTTCTCTGTGGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: EAKIGSFGEHPTRALHPFNFWTL*VLCGWM Trigger: CATCCAGCCACAGAGAACCCAGAGGGTCCAGAAATT...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CAA 90 bp | AGCCTCCCCCGGTTGATTAAAGTACAGTGTCTTGAGGATGAAGGGTaGATGCAATTTCTGGACCCTCTGGGTTCTCTGTGGCTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: SLPRLIKVQCLEDEG*MQFLDPLGSLWLDA Trigger: AGCATCCAGCCACAGAGAACCCAGAGGGTCCAGAAATTGCATCAACCCTTCATCCTCAAGACACTGTACTTTAATCAACCGGGGGAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CAA 90 bp | AGGCCCTGTGTTCCATCCTATGACTGTGAGCATCCACTTCTGTATTaGCCAGGCACTGGAAAAGCCTCACAGGAGACAGCTATATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RPCVPSYDCEHPLLY*PGTGKASQETAISG Trigger: CCCTGATATAGCTGTCTCCTGTGAGGCTTTTCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATAGGATGGAACACAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTCCCTTCTCTGTGGGCCAACAATGTACACAACATAAGGAAAGATGGGGTAGCCTAAAAGTCACATaGCAGGGATGGTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LVPFSVGQQCTQHKERWGSLKVT*QGWWRG Trigger: CCCCCTCCACCATCCCTGTCATGTGACTTTTAGGCT...ACCCCATCTTTCCTTATGTTGTGTACATTGTTGGCCCACAGAGAAGGGAACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGACATCATTGTGCCAGTaGAGCCTGGCCAAGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQTSLCQ*SLAKSC Trigger: GCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGT...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTTTCACTCTTGGACCAGGGAAGAAACTCAGGCAACCTTGGCTCCTCTCGTCTTCACTCTGCCCTaGAAGCTCAGCTCAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: TEFHSWTREETQATLAPLVFTLP*KLSSDK Trigger: CTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGAC...GAGAGGAGCCAAGGTTGCCTGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGAGGTATTTACACATCATTGTGCCAGTGAAGCCTGGCCAAGAGCTGCGACTGTTGTCTTCACTCTaGCCTGCAAGCTCAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PKRYLHIIVPVKPGQELRLLSSL*PASSAQ Trigger: CTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAG...TCGCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGTGTAAATACCTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCAAGAATGTACCACCTTaGCTTCACCAAGCAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: EAKIGSFGEHPTRALHPFKNVPP*LHQADP Trigger: GGGATCTGCTTGGTGAAGCCAAGGTGGTACATTCTT...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGGCAACCTTGGCTCCTCTCAGTGCTCAGCTGTAGAGAGAGCAGTTCAATGTAATCGCAGCCTTTaGCATTCCAAGGCACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: NSGNLGSSQCSAVERAVQCNRSL*HSKAPQ Trigger: TTGAGGTGCCTTGGAATGCCAAAGGCTGCGATTACA...TTGAACTGCTCTCTCTACAGCTGAGCACTGAGAGGAGCCAAGGTTGCCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCTTGTTGAGGGACATCTaGGTTCTTTCCAGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PFSSWVLSLAPKLEALCSLLRDI*VLSSFW Trigger: CCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAA...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAGGTATTTACACATCATTGTGCCAGTGAAGCCTGGCCAAGAGCTGCGATGTAATCGCAGCCTTTaGCATTCCAAGGCACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: PKRYLHIIVPVKPGQELRCNRSL*HSKAPQ Trigger: TTGAGGTGCCTTGGAATGCCAAAGGCTGCGATTACA...TCGCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGTGTAAATACCTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGGCAACCTTGGCTCCTCTCAGTGCTCAGCTGTAGAGAGAGCAGTTCAATGGGTTCTCTGTGGCTaGATGCTATTAGTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: NSGNLGSSQCSAVERAVQWVLCG*MLLVLG Trigger: ACCAAGAACTAATAGCATCCAGCCACAGAGAACCCA...TTGAACTGCTCTCTCTACAGCTGAGCACTGAGAGGAGCCAAGGTTGCCTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGAACATCTTCTGGGTATATACCCAGGAGAGGTATTGCTGGATCTACCGGTTGAGGATGAAGGGTTaGTGCAATTTCTGGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: CWNIFWVYTQERYCWIYRLRMKG*CNFWTL Trigger: GAGGGTCCAGAAATTGCATCAACCCTTCATCCTCAA...CCGGTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGCCTCTGGGTTCTCTGTaGCTGGATGCTATTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQPLGSL*LDAISS Trigger: AGAACTAATAGCATCCAGCCACAGAGAACCCAGAGG...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACAGCCTAAAAGTCACATaGCAGGGATGGTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNSLKVT*QGWWRG Trigger: CCCCCTCCACCATCCCTGTCATGTGACTTTTAGGCT...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTGCGATGGCACCATGTaGGAGAGGCTGTTTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATCDGTM*ERLFPR Trigger: CCTGGGAAACAGCCTCTCTCACATGGTGCCATCGCA...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGAACATCTTCTGGGTATATACCCAGGAGAGGTATTGCTGGATCTACCGGTGGGTTCTCTGTGGCTaGATGCTATTAGTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CWNIFWVYTQERYCWIYRWVLCG*MLLVLG Trigger: ACCAAGAACTAATAGCATCCAGCCACAGAGAACCCA...CCGGTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCGTCTTTTTGTCTTATTaGCAGTATCTTTTGCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: PFSSWVLSLAPKLEALCSVFLSY*QYLLPY Trigger: GTAGGGCAAAAGATACTGTCAATAAGACAAAAAGAC...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCACTTCTTGGCCCTGGCTTTTCCCTGTACTGGTGCTTATAAAGTTTGCTGCCCTACAGAAGCTTTaGAATTTTATGAGGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: TPTSWPWLFPVLVLIKFAALQKL*NFMRLH Trigger: ATGGAGCCTCATAAAATTGCAAAGCTTCTGTAGGGC...AGCAAACTTTATAAGCACCAGTACAGGGAAAAGCCAGGGCCAAGAAGTGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR CAA 90 bp | GAGTTATTGACTACAAGTGCTCTAGTGACTTCATTTGTCTTACTGTaGTCTTCACTCTGCCCTGCAAGCTCAGCTCAGATAAGTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: ELLTTSALVTSFVLL*SSLCPASSAQISHL Trigger: GAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGAAGTCACTAGAGCACTTGTAGTCAATAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTGGATATTTTATTCCCTATTCTAGGGAGGAATTAAGTAAGTATCCACGAACATCATTGTGCCAGTaGAGCCTGGCCAAGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FPGYFIPYSREELSKYPRTSLCQ*SLAKSC Trigger: GCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGT...TCGTGGATACTTACTTAATTCCTCCCTAGAATAGGGAATAAAATATCCAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCACTTCTTGGCCCTGGCTTTTCCCTGTACTGGTGCTTATAAAGTTTGCTAAATGTACTGTTGCTTaGCAAGAATGTACCACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TPTSWPWLFPVLVLIKFAKCTVA*QECTTL Trigger: CAAGGTGGTACATTCTTGTCAAGCAACAGTACATTT...AGCAAACTTTATAAGCACCAGTACAGGGAAAAGCCAGGGCCAAGAAGTGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACGAGGAACCACCAGACTaGATTCCACAGTGGTTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNEEPPD*IPQWLY Trigger: GTACAACCACTGTGGAATTCAGTCTGGTGGTTCCTC...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTGAGGATGAAGGGTTaGTGCAATTTCTGGACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNLRMKG*CNFWTL Trigger: GAGGGTCCAGAAATTGCATCAACCCTTCATCCTCAA...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGAACATCTTCTGGGTATATACCCAGGAGAGGTATTGCTGGATCTACCGGGTCTTTTTGTCTTATTaGCAGTATCTTTTGCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CWNIFWVYTQERYCWIYRVFLSY*QYLLPY Trigger: GTAGGGCAAAAGATACTGTCAATAAGACAAAAAGAC...CCGGTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACAAGAATGTACCACCTTaGCTTCACCAAGCAGATCCC | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNKNVPP*LHQADP Trigger: GGGATCTGCTTGGTGAAGCCAAGGTGGTACATTCTT...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATGCATCCCTTCAAGAGTaGCACTCACATATGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HSFVEGHLGSFQLLAIINASLQE*HSHMSE Trigger: CTCTGACATATGTGAGTGCCACTCTTGAAGGGATGC...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGACAGGCCACCATGTCTaGCAATGCTACCTAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVTGHHV*QCYLEN Trigger: GTTTTCTAGGTAGCATTGGCAGACATGGTGGCCTGT...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGCCTCTGGGTTCTCTGTaGCTGGATGCTATTAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVPLGSL*LDAISS Trigger: AGAACTAATAGCATCCAGCCACAGAGAACCCAGAGG...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACACAGAGTTTCACTCTTaGACCAGGGAAGAAACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNTEFHS*TREETQ Trigger: CTGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGT...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTACCCATTCCTTTGTTaGGGGACATCTGGGTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATYPFLC*GTSGFF Trigger: AAAGAACCCAGATGTCCCTCAACAAAGGAATGGGTA...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATATCCACTGATCACTGAGTGCATATCAAGTGACTTATTTTGTGATTGGGTTACAGGCCACCATGTCTaGCAATGCTACCTAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QYPLITECISSDLFCDWVTGHHV*QCYLEN Trigger: GTTTTCTAGGTAGCATTGGCAGACATGGTGGCCTGT...AACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATGCCCTACAGAAGCTTTaGAATTTTATGAGGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: HSFVEGHLGSFQLLAIINALQKL*NFMRLH Trigger: ATGGAGCCTCATAAAATTGCAAAGCTTCTGTAGGGC...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTACAGAGTTTCACTCTTaGACCAGGGAAGAAACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATTEFHS*TREETQ Trigger: CTGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGT...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACCTGATTGGTGTGAGGTaGAACCTCAAGGTTGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNLIGVR*NLKVVL Trigger: TAAAACAACCTTGAGGTTCCACCTCACACCAATCAG...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 90 bp | ATTCAGGTGAGGTGCCCCACTAGTGTGACTCTAATTTGTGACAAGTaGATAGAGAATCTGACTACAATAGTGGTCTCCAATCTATATTGT | + |
|
Preference number: 2 (lower is better) Translates to: IQVRCPTSVTLICDK*IENLTTIVVSNLYC Trigger: ACAATATAGATTGGAGACCACTATTGTAGTCAGATTCTCTATCAACTTGTCACAAATTAGAGTCACACTAGTGGGGCACCTCACCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACAAATGTACTGTTGCTTaGCAAGAATGTACCACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNKCTVA*QECTTL Trigger: CAAGGTGGTACATTCTTGTCAAGCAACAGTACATTT...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTTAGAGACCACCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACCCTGCAAGATCTGTTTaGAGTTTTCTGTTTAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLETTHSQVCLPKSIKMNPARSV*SFLFNL Trigger: CAGGTTAAACAGAAAACTTCAAACAGATCTTGCAGG...GTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGGTGGTCTCTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATCCATTTGTCAATTCTTaGTCTTACAGCACAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: HSFVEGHLGSFQLLAIINPFVNS*SYSTGH Trigger: ATGTCCTGTGCTGTAAGATCAAGAATTGACAAATGG...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTGCATCTGCTGTCACATaGATTTTTGATCCTAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATASAVT*IFDPSH Trigger: ATGGCTAGGATCAAAAATTCATGTGACAGCAGATGC...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 90 bp | ATCCACGAGTTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGAAGTaGTATCTTGGATATTCTAGGTTTCTGGATCAATATCCACTGATC | + |
|
Preference number: 2 (lower is better) Translates to: IHELVFLLDFLVFWK*YLGYSRFLDQYPLI Trigger: GATCAGTGGATATTGATCCAGAAACCTAGAATATCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAACTCGTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGTTCAAACCCACTTCCTaGAAGATCTGTTTGAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVFKPTS*KICLKF Trigger: AAACTTCAAACAGATCTTGCAGGAAGTGGGTTTGAA...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTCTTTCCCAATCTGTTaGTGGTCTTTTTGTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATSFPIC*WSFCLI Trigger: AATAAGACAAAAAGACCACCAACAGATTGGGAAAGA...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTGTCCTTATTACATGTTaGAACATCTTCTGGGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: SFWMVCLFILAPNFLFATVLITC*NIFWVY Trigger: ATATACCCAGAAGATGTTCCAACATGTAATAAGGAC...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATATCCACTGATCACTGAGTGCATATCAAGTGACTTATTTTGTGATTGGGTTTCTTTCCCAATCTGTTaGTGGTCTTTTTGTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: QYPLITECISSDLFCDWVSFPIC*WSFCLI Trigger: AATAAGACAAAAAGACCACCAACAGATTGGGAAAGA...AACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | GCTATCCCAAAAGTCCCCTATACCCTCCTCCAGCCCTaGTCACCTACCCACTCACTCCCACTTCTTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AIPKVPYTLLQP*SPTHSLPLLGP Trigger: AGGGCCAAGAAGTGGGAGTGAGTGGGTAGGTGAGCAGGGCTGGAGGAGGGTATAGGGGACTTTTGGGATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | CAGGGAAGAAACTCAGGCAACCTTGGCTCCTCTCAGTaGTCAGCTGTAGAGAGAGCAGTTCAAACCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QGRNSGNLGSSQ*SAVERAVQTHF Trigger: GAAGTGGGTTTGAACTGCTCTCTCTACAGCTGAGCACTGAGAGGAGCCAAGGTTGCCTGAGTTTCTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | CACAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSGCTSLQSHQQ*RSVPLSPHPRQ Trigger: CTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | CTGCTCACCTACCCACTCACTCCCACTTCTTGGCCCTaGCTTTTCCCTGTACTGGTGCTTATAAAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLTYPLTPTSWP*LFPVLVLIKFA Trigger: AGCAAACTTTATAAGCACCAGTACAGGGAAAAGCCAGGGCCAAGAAGTGGGAGTGAGTGGGTAGGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCTCATTTGTCTTACTGTaGTCTTCACTCTGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EAKIGSFGEHPTRALHPFSFVLL*SSLCPA Trigger: TGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGA...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | CAAGGGCAGACTGTGCTACCTACAGGCCACCATGTCTaGCAATGCTACCTAGAAAACATATCCCCAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QGQTVLPTGHHV*QCYLENISPTL Trigger: TAGAGTTGGGGATATGTTTTCTAGGTAGCATTGGCAGACATGGTGGCCTGTAGGTAGCACAGTCTGCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | CTGCCCTGCAAGCTCAGCTCAGATAAGTCACCTCCTTaGATCCACCTACACTTTCTTTCTCTGAGTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPCKLSSDKSPP*IHLHFLSLSLE Trigger: CTCCAAACTCAGAGAAAGAAAGTGTAGGTGGATGCAAGGAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | TGCAATAGTGTCTGTGTTTGGTGGCTGATTATGGGATaGACCACCATGTGGGGCAGTTTCTGGATGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CNSVCVWWLIMG*TTMWGSFWMVC Trigger: ACAGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | TGTTCCAACTATAGGGTTGCAGACCCCTTCAGCTCTTaGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CSNYRVADPFSS*VLSLAPKLEAL Trigger: CAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGTTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCCTCCAAACTTTCTCTTaGCAACTCCTTCCCTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PFSSWVLSLAPKLEALCSLQTFS*QLLPWI Trigger: TATCCAGGGAAGGAGTTGCAAAGAGAAAGTTTGGAG...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | TTCCATCCTATGACTGTGAGCATCCACTTCTGTATTTaGCAGGCACTGGAAAAGCCTCACAGGAGACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FHPMTVSIHFCI*QALEKPHRRQL Trigger: TAGCTGTCTCCTGTGAGGCTTTTCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATAGGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCGTTTCCCAGGCTCCATaGTGTTACTTTAAGGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PFSSWVLSLAPKLEALCSVSQAP*CYFKVL Trigger: TAAGACCTTAAAGTAACACAATGGAGCCTGGGAAAC...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCTCTGCATCCCTTCAAGAGTGGCACTCACATATGTCAGAGCAGTCAGGAGCATAAATGTACTGTaGCTTGACAAGAATGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: PGLCIPSRVALTYVRAVRSINVL*LDKNVP Trigger: TGGTACATTCTTGTCAAGCAACAGTACATTTATGCT...CCTGACTGCTCTGACATATGTGAGTGCCACTCTTGAAGGGATGCAGAGCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGCTTGAGGATGAAGGGTaGATGCAATTTCTGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQLEDEG*MQFLDP Trigger: AGGGTCCAGAAATTGCATCAACCCTTCATCCTCAAG...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGCTCAGCTGTAGAGAGAGCAGTTCAAACCCACTTCCTGCAAGATCTGTTTCATTTGTCTTACTGTaGTCTTCACTCTGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLSCRESSSNPLPARSVSFVLL*SSLCPA Trigger: TGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGA...AACAGATCTTGCAGGAAGTGGGTTTGAACTGCTCTCTCTACAGCTGAGCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACGAAACTCAGGCAACCTaGGCTCCTCTCAGTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNETQAT*APLSAQ Trigger: CTGAGCACTGAGAGGAGCCAAGGTTGCCTGAGTTTC...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | TTGCTGGATCTACCGGTAGTACTATGCCCACTTTTCTaGGGAACCACCAGACTGAATTCCACAGTGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLDLPVVLCPLF*GTTRLNSTVVV Trigger: TACAACCACTGTGGAATTCAGTCTGGTGGTTCCTCAGAAAAGTGGGCATAGTACTACCGGTAGATCCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | TTCTGGCATTATGCAATAGTGTCTGTGTTTGGTGGCTaGTTATGGGATGGACCACCATGTGGGGCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FWHYAIVSVFGG*LWDGPPCGAVS Trigger: AGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | ATAAAGTTTGCTAGACCAAGGGGCCTCTCTTCCCAATaGTGGCCAACTACGCCATCTTCTGCTACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFARPRGLSSQ*WPTTPSSATYA Trigger: TGCATATGTAGCAGAAGATGGCGTAGTTGGCCATCATTGGGAAGAGAGGCCCCTTGGTCTAGCAAACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | GACTTCATTTGTCTTACTGTTGTCTTCACTCTGCCCTaGAAGCTCAGCTCAGATAAGTCACCTCCTTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: DFICLTVVFTLP*KLSSDKSPPCI Trigger: GATGCAAGGAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | TGTGTTTGGTGGCTGATTATGGGATGGACCACCATGTaGGGCAGTTTCTGGATGGTCTGTCTTTTCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CVWWLIMGWTTM*GSFWMVCLFIL Trigger: TAAGATGAAAAGACAGACCATCCAGAAACTGCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | CTAGTGACTTCATTTGTCTTACTGTTGTCTTCACTCTaGCCTGCAAGCTCAGCTCAGATAAGTCACCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVTSFVLLLSSL*PASSAQISHLL Trigger: AAGGAGGTGACTTATCTGAGCTGAGCTTGCAGGGCAGAGTGAAGACAACAGTAAGACAAATGAAGTCACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | AAAATCTTTCTGGCATTATGCAATAGTGTCTGTGTTTaGTGGCTGATTATGGGATGGACCACCATGTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KIFLALCNSVCV*WLIMGWTTMWG Trigger: GCCCCACATGGTGGTCCATCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAGAAAGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTTGTTCCAACTATAGGGTTGCAGACCCCTTCAGCTCTTGGGTACTTTCTCTGGCAAAAGTCAGTTTaGAAGGGAATGTCTGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: TVVPTIGLQTPSALGYFLWQKSV*KGMSVI Trigger: GATTACAGACATTCCCTTCAAAACTGACTTTTGCCA...GAGAAAGTACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGTTGGAACAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGTGGCAAAAGTCAGTTTaGAAGGGAATGTCTGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQWQKSV*KGMSVI Trigger: GATTACAGACATTCCCTTCAAAACTGACTTTTGCCA...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | CCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATaGACAATTATTCAGGTGAGGTGCCCCACTAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PIVRCVFPNQSK*TIIQVRCPTSV Trigger: CACACTAGTGGGGCACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | GGAGCATGTGTCCTTATTACATGTTGGAACATCTTCTaGGTATATACCCAGGAGAGGTATTGCTGGATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GACVLITCWNIF*VYTQERYCWIY Trigger: GTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACATGTAATAAGGACACATGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAGAGACCACCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACCTTGAGGATGAAGGGTaGATGCAATTTCTGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLETTHSQVCLPKSIKMNLEDEG*MQFLDP Trigger: AGGGTCCAGAAATTGCATCAACCCTTCATCCTCAAG...GTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGGTGGTCTCTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTTGTTCCAACTATAGGGTTGCAGACCCCTTCAGCTCTTGGGTACTTTCTCGGTCTTTTTGTCTTATaGACAGTATCTTTTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: TVVPTIGLQTPSALGYFLGLFVL*TVSFAL Trigger: TAGGGCAAAAGATACTGTCAATAAGACAAAAAGACC...GAGAAAGTACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGTTGGAACAACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | GTAAATGTACCACATTTTCTGTACCCATTCCTTTGTTaGGGGACATCTGGGTTCTTTCCAGCTTCTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VNVPHFLYPFLC*GTSGFFPASGY Trigger: ATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATGGGTACAGAAAATGTGGTACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAGAGACCACCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACTACAGAGTTTCACTCTaGGACCAGGGAAGAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLETTHSQVCLPKSIKMNYRVSL*DQGRNS Trigger: TGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGTA...GTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGGTGGTCTCTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATTGCCCTACAGAAGCTTaGCAATTTTATGAGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSFVEGHLGSFQLLAIINCPTEA*QFYEAP Trigger: TGGAGCCTCATAAAATTGCAAAGCTTCTGTAGGGCA...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | TCCCTGATGATTAAGGATGTTGAACATTTTTGCACGTaGTTCTCAGCCCTTTGGTATTCCTCAGATGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLMIKDVEHFCT*FSALWYSSDEN Trigger: ATTCTCATCTGAGGAATACCAAAGGGCTGAGAAGCACGTGCAAAAATGTTCAACATCCTTAATCATCAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | TATCAGGGTCCTTTCAGCAAAATCTTTCTGGCATTATaGAATAGTGTCTGTGTTTGGTGGCTGATTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YQGPFSKIFLAL*NSVCVWWLIMG Trigger: TCCCATAATCAGCCACCAAACACAGACACTATTGCATAATGCCAGAAAGATTTTGCTGAAAGGACCCTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | TATGAACATAGTGGAGCATGTGTCCTTATTACATGTTaGAACATCTTCTGGGTATATACCCAGGAGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHSGACVLITC*NIFWVYTQERY Trigger: ATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACATGTAATAAGGACACATGCTCCACTATGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAGCATAAATGTACTGTaGCTTGACAAGAATGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: HSFVEGHLGSFQLLAIINSINVL*LDKNVP Trigger: TGGTACATTCTTGTCAAGCAACAGTACATTTATGCT...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACCTGTCACATGAATTTTaGATCCTAGCCATTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNLSHEF*ILAILI Trigger: AATCAGAATGGCTAGGATCAAAAATTCATGTGACAG...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTGTCCTTATTACATGTaGGAACATCTTCTGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNCPYYM*EHLLGI Trigger: TATACCCAGAAGATGTTCCAACATGTAATAAGGACA...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | TCTAGGTTTCTGGATCAATATCCACTGATCACTGAGTaGATATCAAGTGACTTATTTTGTGATTGGGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: SRFLDQYPLITE*ISSDLFCDWVT Trigger: GGTAACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTGATCCAGAAACCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | TTCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTaGCAGTATCTTTTGCCCTACAGAAGCTTTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: FFPNLLVVFLSY*QYLLPYRSFAI Trigger: AATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CCA 72 bp | ATCACTGAGTGCATATCAAGTGACTTATTTTGTGATTaGGTTACCTCACTCAGGATTATATCCTTCAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: ITECISSDLFCD*VTSLRIISFRY Trigger: GTATCTGAAGGATATAATCCTGAGTGAGGTAACCCAATCACAAAATAAGTCACTTGATATGCACTCAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR TCA 72 bp | ATCTTGGATATTCTAGGTTTCTGGATCAATATCCACTaGTCACTGAGTGCATATCAAGTGACTTATTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ILDILGFWINIH*SLSAYQVTYFV Trigger: CACAAAATAAGTCACTTGATATGCACTCAGTGATCAGTGGATATTGATCCAGAAACCTAGAATATCCAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR GCA 72 bp | GTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTaGAATTTTATGAGGCTCCATTTGTCAATTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLTVSFALQKL*NFMRLHLSILD Trigger: ATCAAGAATTGACAAATGGAGCCTCATAAAATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | GGCCCATCTCTTGCTTTAGTCTACAGAGTTTCACTCTaGGACCAGGGAAGAAACTCAGGCAACCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSLALVYRVSL*DQGRNSGNLGS Trigger: GGAGCCAAGGTTGCCTGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGTAGACTAAAGCAAGAGATGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCGTTCAAGCCACTACCTaGTTTGATGTAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EAKIGSFGEHPTRALHPFVQATT*FDVGEQ Trigger: TTGCTCTCCTACATCAAAGCAGGTAGTGGCTTGAAC...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTAAAATTGGCAGCTTTGGTGAACATCCCACCAGGGCTCTGCATCCCTTCAGTTATTTGCAGACCTaGAGCTGTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAKIGSFGEHPTRALHPFSYLQT*SCEGRG Trigger: TCCTCTACCTTCACAGCTCCAGGTCTGCAAATAACT...GAAGGGATGCAGAGCCCTGGTGGGATGTTCACCAAAGCTGCCAATTTTAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | CTCACATATGTCAGAGCAGTCAGGAGCCTCCCCCGGTaGATTAAAGTACAGTGTCTTGAGGATGAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYVRAVRSLPR*IKVQCLEDEGL Trigger: CAACCCTTCATCCTCAAGACACTGTACTTTAATCAACCGGGGGAGGCTCCTGACTGCTCTGACATATGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | CCACATCCTCGCCAGCATCTGCTGTCACATGAATTTTaGATCCTAGCCATTCTGATTGGTGTGAGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPRQHLLSHEF*ILAILIGVRWN Trigger: GTTCCACCTCACACCAATCAGAATGGCTAGGATCAAAAATTCATGTGACAGCAGATGCTGGCGAGGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | AACCACCAGACTGAATTCCACAGTGGTTGTACAAGCTaGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHQTEFHSGCTS*QSHQQWRSVPL Trigger: AAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTGTGGAATTCAGTCTGGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCCCCAAGGCAGAATTGTaGACATATCTCACAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PFSSWVLSLAPKLEALCSPKAEL*TYLTNT Trigger: AGTGTTTGTGAGATATGTGCACAATTCTGCCTTGGG...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGAAGATGTCTGTGGTTTaGGCTTTGTCCAAATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQKMSVV*ALSKWL Trigger: CAACCATTTGGACAAAGCTCAAACCACAGACATCTT...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCCCTTCTCTGTGGGCCAACAATGTACACAACATAAGGAAAGATGGGGTCCCAAGGCAGAATTGTaGACATATCTCACAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LVPFSVGQQCTQHKERWGPKAEL*TYLTNT Trigger: AGTGTTTGTGAGATATGTGCACAATTCTGCCTTGGG...ACCCCATCTTTCCTTATGTTGTGTACATTGTTGGCCCACAGAGAAGGGAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAGACCACCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACGCCCCGTGCCATCCTTaGCAGATAAACTGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLETTHSQVCLPKSIKMNAPCHP*QINCSF Trigger: AAAGCTGCAGTTTATCTGGCAAGGATGGCACGGGGC...GTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGGTGGTCTCTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCGAAAAGGAGGAGAAATaGAAGAACTTGGAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSSWVLSLAPKLEALCSEKEEK*KNLERC Trigger: ACATCTTTCCAAGTTCTTCCATTTCTCCTCCTTTTC...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | TTGGAACATCTTCTGGGTATATACCCAGGAGAGGTATaGCTGGATCTACCGGTAGTACTATGCCCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEHLLGIYPGEV*LDLPVVLCPLF Trigger: GAAAAGTGGGCATAGTACTACCGGTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCCACTTCTTGGCCCTGGCTTTTCCCTGTACTGGTGCTTATAAAGTTTGCTTTAGAAAATGCCAAGTaGATGAGAATGAGGTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPTSWPWLFPVLVLIKFALENAK*MRMRSR Trigger: TCTCGACCTCATTCTCATCCACTTGGCATTTTCTAA...AGCAAACTTTATAAGCACCAGTACAGGGAAAAGCCAGGGCCAAGAAGTGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGGTATTTACACATCATTGTGCCAGTGAAGCCTGGCCAAGAGCTGCGAGAAAAGGAGGAGAAATaGAAGAACTTGGAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PKRYLHIIVPVKPGQELREKEEK*KNLERC Trigger: ACATCTTTCCAAGTTCTTCCATTTCTCCTCCTTTTC...TCGCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGTGTAAATACCTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGAGCCACTACCTGCTTTaGTGTAGGAGAGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVSHYLL*CRRASW Trigger: CCAACTTGCTCTCCTACATCAAAGCAGGTAGTGGCT...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR TCA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAATCATGTGCCACCGTaGAACCTGTGTAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSFVEGHLGSFQLLAIINNHVPP*NLCRRR Trigger: TCTCCTTCTACACAGGTTTCACGGTGGCACATGATT...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGAACATCTTCTGGGTATATACCCAGGAGAGGTATTGCTGGATCTACCGGGATCAGATTAGAAAATaGCAAGTGGATGAGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CWNIFWVYTQERYCWIYRDQIRK*QVDENE Trigger: CTCATTCTCATCCACTTGGCATTTTCTAATCTGATC...CCGGTAGATCCAGCAATACCTCTCCTGGGTATATACCCAGAAGATGTTCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACTTCCTGCAAGATCTGTTTGAAGTTTTCTGTTTAACCTGGGGAGAAACTGTTCAAGCCACTACCTaGTTTGATGTAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THFLQDLFEVFCLTWGETVQATT*FDVGEQ Trigger: TTGCTCTCCTACATCAAAGCAGGTAGTGGCTTGAAC...AGTTTCTCCCCAGGTTAAACAGAAAACTTCAAACAGATCTTGCAGGAAGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | TGTAAATGTACCACATTTTCTGTACCCATTCCTTTGTaGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CKCTTFSVPIPL*RDIWVLSSFWL Trigger: TAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATGGGTACAGAAAATGTGGTACATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGGATATTTTATTCCCTATTCTAGGGAGGAATTAAGTAAGTATCCACGAAGCCACTACCTGCTTTaGTGTAGGAGAGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPGYFIPYSREELSKYPRSHYLL*CRRASW Trigger: CCAACTTGCTCTCCTACATCAAAGCAGGTAGTGGCT...TCGTGGATACTTACTTAATTCCTCCCTAGAATAGGGAATAAAATATCCAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGAATCATGTGCCACCGTaGAACCTGTGTAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVNHVPP*NLCRRR Trigger: TCTCCTTCTACACAGGTTTCACGGTGGCACATGATT...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACAGTTATTTGCAGACCTaGAGCTGTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNSYLQT*SCEGRG Trigger: TCCTCTACCTTCACAGCTCCAGGTCTGCAAATAACT...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
||
| 3UTR CAA 72 bp | TCCATTTGTCAATTCTTGATCTTACAGCACAGGACATaGCAGTTCTGTTTAGGAATTTTTCCCCTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SICQFLILQHRT*QFCLGIFPLCP Trigger: TGGGCACAGGGGAAAAATTCCTAAACAGAACTGCAATGTCCTGTGCTGTAAGATCAAGAATTGACAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR TCA 90 bp | CATTTAGAGACCACCCATAGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAAGATGTCTGTGGTTTaGGCTTTGTCCAAATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLETTHSQVCLPKSIKMNKMSVV*ALSKWL Trigger: CAACCATTTGGACAAAGCTCAAACCACAGACATCTT...GTTCATTTTGATTGATTTGGGAAGACACACCTGACTATGGGTGGTCTCTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTGGATATTTTATTCCCTATTCTAGGGAGGAATTAAGTAAGTATCCACGACATCACGAAGAGTCATaGGAGAGAGGAAGAACCACT | + |
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Preference number: 4 (lower is better) Translates to: FPGYFIPYSREELSKYPRHHEES*ERGRTT Trigger: AGTGGTTCTTCCTCTCTCTCATGACTCTTCGTGATG...TCGTGGATACTTACTTAATTCCTCCCTAGAATAGGGAATAAAATATCCAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | ACCCACTTCCTGCAAGATCTGTTTGAAGTTTTCTGTTTAACCTGGGGAGAAACTAAGACATTAGGAACATaGACATCTCTGCTGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: THFLQDLFEVFCLTWGETKTLGT*TSLLIR Trigger: TCTGATCAGCAGAGATGTCCATGTTCCTAATGTCTT...AGTTTCTCCCCAGGTTAAACAGAAAACTTCAAACAGATCTTGCAGGAAGTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR GCA 90 bp | CATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATGATCAGATTAGAAAATaGCAAGTGGATGAGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: HSFVEGHLGSFQLLAIINDQIRK*QVDENE Trigger: CTCATTCTCATCCACTTGGCATTTTCTAATCTGATC...ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAAAGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTTAGAAAATGCCAAGTaGATGAGAATGAGGTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SFWMVCLFILAPNFLFATLENAK*MRMRSR Trigger: TCTCGACCTCATTCTCATCCACTTGGCATTTTCTAA...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTGGAAAGATGTCTGTaGTTTGAGCTTTGTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QFLDGLSFHLSSKLSLCNLERCL*FELCPN Trigger: ATTTGGACAAAGCTCAAACCACAGACATCTTTCCAA...GTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGAAGACATTAGGAACATaGACATCTCTGCTGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVKTLGT*TSLLIR Trigger: TCTGATCAGCAGAGATGTCCATGTTCCTAATGTCTT...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTTTGGAAAGATGTCTGTaGTTTGAGCTTTGTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SFWMVCLFILAPNFLFATLERCL*FELCPN Trigger: ATTTGGACAAAGCTCAAACCACAGACATCTTTCCAA...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTAGAAATGGAAGAACTTaGAAAGATGTCTGTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SFWMVCLFILAPNFLFATRNGRT*KDVCGL Trigger: CAAACCACAGACATCTTTCCAAGTTCTTCCATTTCT...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | CCCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTAAATTGGAGGCCCTGTGTTCCGGCCCCGTGCCATCCTaGCCAGATAAACTGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PFSSWVLSLAPKLEALCSGPVPS*PDKLQL Trigger: AAGCTGCAGTTTATCTGGCAAGGATGGCACGGGGCC...GGAACACAGGGCCTCCAATTTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGAGGTATTTACACATCATTGTGCCAGTGAAGCCTGGCCAAGAGCTGCGAGGCCCCGTGCCATCCTaGCCAGATAAACTGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PKRYLHIIVPVKPGQELRGPVPS*PDKLQL Trigger: AAGCTGCAGTTTATCTGGCAAGGATGGCACGGGGCC...TCGCAGCTCTTGGCCAGGCTTCACTGGCACAATGATGTGTAAATACCTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGTTTCACTCTTGGACCAGGGAAGAAACTCAGGCAACCTTGGCTCCTCTCGTCCCCAAGGCAGAATaGTGCACATATCTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: TEFHSWTREETQATLAPLVPKAE*CTYLTN Trigger: GTTTGTGAGATATGTGCACAATTCTGCCTTGGGGAC...GAGAGGAGCCAAGGTTGCCTGAGTTTCTTCCCTGGTCCAAGAGTGAAACTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS GCA 90 bp | AATGAGAACACTCCATGTAGCTCTGATTTCAGGAGGGGAGTTATTTaGAGACCTGGAGCTGTGAAGGTAGAGGACACGTTTGTGGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: NENTPCSSDFRRGVI*RPGAVKVEDTFVVL Trigger: AAGCACCACAAACGTGTCCTCTACCTTCACAGCTCCAGGTCTGCAAATAACTCCCCTCCTGAAATCAGAGCTACATGGAGTGTTCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091730.2 ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | CTGGTTCCCTTCTCTGTGGGCCAACAATGTACACAACATAAGGAAAGATGGGGTGAGAGGAAGAACCACTaGATGATGTGTCTTGATTGG | + |
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Preference number: 5 (lower is better) Translates to: LVPFSVGQQCTQHKERWGERKNH*MMCLDW Trigger: CCAATCAAGACACATCATCAAGTGGTTCTTCCTCTC...ACCCCATCTTTCCTTATGTTGTGTACATTGTTGGCCCACAGAGAAGGGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | ACTGTTGTTCCAACTATAGGGTTGCAGACCCCTTCAGCTCTTGGGTACTTTCTCAAAGATGTCTGTGGTTaGAGCTTTGTCCAAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: TVVPTIGLQTPSALGYFLKDVCG*SFVQMV Trigger: AACCATTTGGACAAAGCTCAAACCACAGACATCTTT...GAGAAAGTACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGTTGGAACAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | CTGGTTCCCTTCTCTGTGGGCCAACAATGTACACAACATAAGGAAAGATGGGGTGAGAAATGGAAGAACTaGGAAAGATGTCTGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LVPFSVGQQCTQHKERWGEKWKN*ERCLWF Trigger: AAACCACAGACATCTTTCCAAGTTCTTCCATTTCTC...ACCCCATCTTTCCTTATGTTGTGTACATTGTTGGCCCACAGAGAAGGGAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTGCCCATGTATTCGAGGGTTTTCCCCACTTCCTCCTCTATAAATTTCAGGAGAAATGGAAGAACTaGGAAAGATGTCTGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PCAHVFEGFPHFLLYKFQEKWKN*ERCLWF Trigger: AAACCACAGACATCTTTCCAAGTTCTTCCATTTCTC...CTGAAATTTATAGAGGAGGAAGTGGGGAAAACCCTCGAATACATGGGCACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS GCA 90 bp | AGAATGAGGTCGAGAGGCTTTTTCTCAGTCCCCAAGGCAGAATTGTaGACATATCTCACAAACACTAGAATATTTCCTACAATTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RMRSRGFFSVPKAEL*TYLTNTRIFPTIPG Trigger: ACCTGGAATTGTAGGAAATATTCTAGTGTTTGTGAGATATGTGCACAATTCTGCCTTGGGGACTGAGAAAAAGCCTCTCGACCTCATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091730.2 ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGGTGTGTCTTCCCAAATCAATCAAAATGAACAATTATTCAGGTGAGGTGGTCCCCAAGGCAGAATaGTGCACATATCTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: SQVCLPKSIKMNNYSGEVVPKAE*CTYLTN Trigger: GTTTGTGAGATATGTGCACAATTCTGCCTTGGGGAC...CACCTCACCTGAATAATTGTTCATTTTGATTGATTTGGGAAGACACACCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS-3UTR CAA 90 bp | AGTTTCTGGATGGTCTGTCTTTTCATCTTAGCTCCAAACTTTCTCTTTGCAACTGAGAGGAAGAACCACTaGATGATGTGTCTTGATTGG | + |
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Preference number: 5 (lower is better) Translates to: SFWMVCLFILAPNFLFATERKNH*MMCLDW Trigger: CCAATCAAGACACATCATCAAGTGGTTCTTCCTCTC...AGTTGCAAAGAGAAAGTTTGGAGCTAAGATGAAAAGACAGACCATCCAGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS TCA 72 bp | CATGAGAGAGAGGAAGAACCACTTGATGATGTGTCTTaGTTGGAGCATATAGCAGTGGCCAATGTACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: HEREEEPLDDVS*LEHIAVANVRC Trigger: GCAACGTACATTGGCCACTGCTATATGCTCCAATCAAGACACATCATCAAGTGGTTCTTCCTCTCTCTCATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091730.2 ENSMUST00000226330.2 ENSMUST00000226965.2 |
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| CDS GCA 72 bp | GATCCCTGTGCTACAAATAATGATCAGATTAGAAAATaGCAAGTGGATGAGAATGAGGTCGAGAGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: DPCATNNDQIRK*QVDENEVERLF Trigger: AAAAAGCCTCTCGACCTCATTCTCATCCACTTGGCATTTTCTAATCTGATCATTATTTGTAGCACAGGGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091730.2 ENSMUST00000226330.2 ENSMUST00000226965.2 |
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