Pregenerated sensors for VMN1R200 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101073Ensembl transcript IDs: ENSMUST00000074324.5, ENSMUST00000226157.2, ENSMUST00000227326.2, ENSMUST00000228726.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCTTTCCTCCTAGTCTTCCACAGATTTCTTTCTGTGCCCACATaGCATGTCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: HPFLLVFHRFLSVPT*HVSTHLCSLCRAQG Trigger: ACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGACATGTCATGTGGGCACAGAAAGAAATCTGTGGAAGACTAGGAGGAAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 90 bp | ATCCTAATTAGAGTGCCTGTGGGTAAGGAGAAGGGTAGTGAACAGTaGCCAAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: ILIRVPVGKEKGSEQ*PRVSGPQVLTPVLP Trigger: AGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTTGGGCACTGTTCACTACCCTTCTCCTTACCCACAGGCACTCTAATTAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 90 bp | CTTGTAGCTCTAGCTCCTTGGGACCTAAAACCCTCTTCAGGCCTGTaGGGGCAGCTATATAAATGTGGCATACATCCACACATGCACATA | + |
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Preference number: 1 (lower is better) Translates to: LVALAPWDLKPSSGL*GQLYKCGIHPHMHI Trigger: TATGTGCATGTGTGGATGTATGCCACATTTATATAGCTGCCCGCACAGGCCTGAAGAGGGTTTTAGGTCCCAAGGAGCTAGAGCTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 90 bp | GGGAAAAATCACATAGAATGTGCAGAAGCTATGGGAGCAAGAGCTTaGTATTTCAAGCTGTACTCCAGGTGTCTCTGTCTCATACCCCTA | + |
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Preference number: 1 (lower is better) Translates to: GKNHIECAEAMGARA*YFKLYSRCLCLIPL Trigger: TAGGGGTATGAGACAGAGACACCTGGAGTACAGCTTGAAATAGCAAGCTCTTGCTCCCATAGCTTCTGCACATTCTATGTGATTTTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 90 bp | GACAATTTTAGATTGCATTTAGGAATTGATAGACCATCTTCTCTCTaGGTCATGCCTCTCTGTCCCCTCTCAGAGTATCAGGGAGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: DNFRLHLGIDRPSSL*VMPLCPLSEYQGAY Trigger: GTAGGCTCCCTGATACTCTGAGAGGGGACAGAGAGGCATGACTCAGAGAGAAGATGGTCTATCAATTCCTAAATGCAATCTAAAATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 90 bp | CATGCCCTATTTTACCCTACCCATCTAACTTTATGTTTACTGTCCTaGGGTCTTCCCCAATTGTGTACCTTTATCTGTGTCAGTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: HALFYPTHLTLCLLS*GLPQLCTFICVSIC Trigger: ACAAATACTGACACAGATAAAGGTACACAATTGGGGAAGACCTCAGGACAGTAAACATAAAGTTAGATGGGTAGGGTAAAATAGGGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 90 bp | AAGTTTATGCTTTATCATCATCTTAGGAGCATTGTGGGAGCATGGTaGCACCAATCTCATTGGTATAGTTTTCTATTCAGATCCTTCACA | + |
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Preference number: 1 (lower is better) Translates to: KFMLYHHLRSIVGAW*HQSHWYSFLFRSFT Trigger: TGTGAAGGATCTGAATAGAAAACTATACCAATGAGATTGGTGTCACCATGCTCCCACAATGCTCCTAAGATGATGATAAAGCATAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 90 bp | CATGAAGGATCGAAGTCAACAGAAGTTACACAGCTCATATCAAAGTaGAAAGCTTTTAGAGGGAAAAATCACATAGAATGTGCAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HEGSKSTEVTQLISK*KAFRGKNHIECAEA Trigger: AGCTTCTGCACATTCTATGTGATTTTTCCCTCTAAAAGCTTTTCACTTTGATATGAGCTGTGTAACTTCTGTTGACTTCGATCCTTCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 90 bp | AAATTTACGATAAATAAAATCATGATGAAGAAAGAAGGAGTAGAGTaGTCCATGCATGAAGGATCGAAGTCAACAGAAGTTACACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: KFTINKIMMKKEGVE*SMHEGSKSTEVTQL Trigger: GAGCTGTGTAACTTCTGTTGACTTCGATCCTTCATGCATGGAGCACTCTACTCCTTCTTTCTTCATCATGATTTTATTTATCGTAAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 90 bp | CAGATACTTAGAAAAGGGCTTGACATAAATGCAGTGAGATTAACATaGCCAATGGATGTTACCTATAGACAAGTCACATTTACATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: QILRKGLDINAVRLT*PMDVTYRQVTFTSE Trigger: TTCTGATGTAAATGTGACTTGTCTATAGGTAACATCCATTGGTCATGTTAATCTCACTGCATTTATGTCAAGCCCTTTTCTAAGTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCAAAAGACAGGAGATGGTaGAGAGACCTGCTTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SALTCAACAGLRVGVLTAKDRRW*RDLLLL Trigger: CAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTT...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCACCAAGACCTTCCACATaGCCTATTTTACCCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: SALTCAACAGLRVGVLTAPRPST*PILPYP Trigger: TGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGG...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCAGCAGTGAGATTAACATaGCCAATGGATGTTACCTAT | + |
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Preference number: 2 (lower is better) Translates to: SALTCAACAGLRVGVLTAAVRLT*PMDVTY Trigger: ATAGGTAACATCCATTGGTCATGTTAATCTCACTGC...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAGATGGTGAAGAGACCTaGTTCTCTTGCAGAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVDGEET*FSCREL Trigger: GAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATC...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTTTGGTGACAAAGAGCTaGACAGTACAGCGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KTGDGEETCFSCRELYFLLVTKS*TVQRKA Trigger: TGCTTTCCGCTGTACTGTCCAGCTCTTTGTCACCAA...AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTATTGGTGACAAAGAGCTaGACAGTACAGCGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVLVTKS*TVQRKA Trigger: TGCTTTCCGCTGTACTGTCCAGCTCTTTGTCACCAA...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR CAA 90 bp | AGGGAAAAATCACATAGAATGTGCAGAAGCTATGGGAGCAAGAGCTaGCTATTTCAAGCTGTACTCCAGGTGTCTCTGTCTCATACCCCT | + |
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Preference number: 2 (lower is better) Translates to: REKSHRMCRSYGSKS*LFQAVLQVSLSHTP Trigger: AGGGGTATGAGACAGAGACACCTGGAGTACAGCTTGAAATAGCAAGCTCTTGCTCCCATAGCTTCTGCACATTCTATGTGATTTTTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTCCATTTTCTCAGGGTTaGAGAGATGGCTCAATACTT | + |
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Preference number: 2 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSPFSQG*RDGSIL Trigger: AAGTATTGAGCCATCTCTCCAACCCTGAGAAAATGG...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATCCATTTTCTCAGGGTTaGAGAGATGGCTCAATACTT | + |
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Preference number: 2 (lower is better) Translates to: ETCFSCRELYFLTLYPHHPFSQG*RDGSIL Trigger: AAGTATTGAGCCATCTCTCCAACCCTGAGAAAATGG...ATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTTACATCACTTCCTTTTaGGCCAAATTGCACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: CYFCQPRPSTCPILPYPSYITSF*AKLHRL Trigger: CAGCCTGTGCAATTTGGCTCAAAAGGAAGTGATGTA...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTATTATGTTTACTGTCCTaGGGTCTTCCCCAATTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVLCLLS*GLPQLC Trigger: ACACAATTGGGGAAGACCTCAGGACAGTAAACATAA...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTCCATTTTCTCAGGGTTaGAGAGATGGCTCAATACTT | + |
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Preference number: 2 (lower is better) Translates to: KGFWSSGLNSSLASFPLCPFSQG*RDGSIL Trigger: AAGTATTGAGCCATCTCTCCAACCCTGAGAAAATGG...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGGTCTTCCCCAATTGTGTACCTTTATCTGTGTCAGTATTTGTAGAGCAAATGTCAATTTGCATGTaGAGGTCAGAGGACAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PEVFPNCVPLSVSVFVEQMSICM*RSEDSM Trigger: CATGCTGTCCTCTGACCTCCACATGCAAATTGACAT...TTGCTCTACAAATACTGACACAGATAAAGGTACACAATTGGGGAAGACCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR CAA 90 bp | ATCCTTCATTTAAATGAATGTAGAGTTAGATTCTTTCACAGCCTTTaGGTGACAAAGAGCTGGACAGTACAGCGGAAAGCACCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: ILHLNECRVRFFHSL*VTKSWTVQRKAPRH Trigger: ATGCCTGGGTGCTTTCCGCTGTACTGTCCAGCTCTTTGTCACCAAAAGGCTGTGAAAGAATCTAACTCTACATTCATTTAAATGAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAACAGGTACAGAGCATaGACCTATTATACAGTTATA | + |
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Preference number: 2 (lower is better) Translates to: KGFWSSGLNSSLASFPLCNRYRA*TYYTVI Trigger: TATAACTGTATAATAGGTGCATGCTCTGTACCTGTT...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAGAGACCTGCTTCTCTTaGAGAGAACTCTACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PCSYITSFLHHFLLSQIAETCFS*RELYFL Trigger: AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTC...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | CACATTTACATCAGAAAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAAACAGGTACAGAGCATaGACCTATTATACAGTTATA | + |
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Preference number: 2 (lower is better) Translates to: HIYIRKTGDGEETCFSCRNRYRA*TYYTVI Trigger: TATAACTGTATAATAGGTGCATGCTCTGTACCTGTT...TCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCTGATGTAAATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR CAA 90 bp | TTTTACTCACTGAGTCACCTCTCCAGTCACCGTCTATTCTTAATATaGAAAAACCTCTCCATCACTCAGACTAAACACATTTCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: FYSLSHLSSHRLFLI*KNLSITQTKHISMF Trigger: GAACATGGAAATGTGTTTAGTCTGAGTGATGGAGAGGTTTTTCAATATTAAGAATAGACGGTGACTGGAGAGGTGACTCAGTGAGTAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR CAA 90 bp | ACATTTCCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTaGAGCCAAATTGCACAGGCTGATTTAAAAGGTGTTGATTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TFPCSYITSFLHHFL*SQIAQADLKGVDLS Trigger: AGACAAATCAACACCTTTTAAATCAGCCTGTGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGGAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR GCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACAAACAGGTACAGAGCATaGACCTATTATACAGTTATA | + |
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Preference number: 2 (lower is better) Translates to: YKPHLHASSHGSSNTSFTNRYRA*TYYTVI Trigger: TATAACTGTATAATAGGTGCATGCTCTGTACCTGTT...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR CCA 72 bp | CAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTaGGTGTCCTCACAGCACAGCCAGGTCCTGTTTATC | + |
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Preference number: 3 (lower is better) Translates to: QHSPVQPVQGSG*VSSQHSQVLFI Trigger: GATAAACAGGACCTGGCTGTGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCATGTAGCTCTAGCTCCTaGGGACCTAAAACCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SALTCAACAGLRVGVLTACSSSS*GPKTLF Trigger: GAAGAGGGTTTTAGGTCCCAAGGAGCTAGAGCTACA...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCAGTCACCAACAGGAGTTaGGCTTTAAAAGACTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SALTCAACAGLRVGVLTAVTNRS*ALKDSS Trigger: AGAAGAGTCTTTTAAAGCCAAACTCCTGTTGGTGAC...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCACAGAGTATATCCCTGTaGGGAGCTTTCACAAATATA | + |
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Preference number: 3 (lower is better) Translates to: SALTCAACAGLRVGVLTAQSISL*GAFTNI Trigger: TATATTTGTGAAAGCTCCCAACAGGGATATACTCTG...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 72 bp | AGAGTGCCTGTGGGTAAGGAGAAGGGTAGTGAACAGTaGCCAAGGGTTTCTGGTCCTCAGGTCTTAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: RVPVGKEKGSEQ*PRVSGPQVLTP Trigger: TGGAGTTAAGACCTGAGGACCAGAAACCCTTGGGCACTGTTCACTACCCTTCTCCTTACCCACAGGCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 72 bp | CTAGCTCCTTGGGACCTAAAACCCTCTTCAGGCCTGTaGGGGCAGCTATATAAATGTGGCATACATCCACAC | + |
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Preference number: 3 (lower is better) Translates to: LAPWDLKPSSGL*GQLYKCGIHPH Trigger: GTGTGGATGTATGCCACATTTATATAGCTGCCCGCACAGGCCTGAAGAGGGTTTTAGGTCCCAAGGAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR TCA 72 bp | GCTGTACTCCAGGTGTCTCTGTCTCATACCCCTACTTaGCCATACACTGTCCCTGTGAACACTGAGACAATT | + |
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Preference number: 3 (lower is better) Translates to: AVLQVSLSHTPT*PYTVPVNTETI Trigger: AATTGTCTCAGTGTTCACAGGGACAGTGTATGGTCAAGTAGGGGTATGAGACAGAGACACCTGGAGTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | AAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTTGTAGCTCTAGCTCCTaGGGACCTAAAACCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KTGDGEETCFSCRELYFLCSSSS*GPKTLF Trigger: GAAGAGGGTTTTAGGTCCCAAGGAGCTAGAGCTACA...AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTACCCATTTTCTCAGGGTaGGAGAGATGGCTCAATACT | + |
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Preference number: 3 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVPIFSG*ERWLNT Trigger: AGTATTGAGCCATCTCTCCAACCCTGAGAAAATGGG...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAAGAGACCTGCTTCTCTaGCAGAGAACTCTACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVRDLLL*QRTLLP Trigger: AGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCT...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 72 bp | AGAAAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTaGAGAGAACTCTACTTCCTTACCCTGTACCCACAT | + |
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Preference number: 3 (lower is better) Translates to: RKTGDGEETCFS*RELYFLTLYPH Trigger: ATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| 3UTR GCA 72 bp | CACATAGAATGTGCAGAAGCTATGGGAGCAAGAGCTTaGTATTTCAAGCTGTACTCCAGGTGTCTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HIECAEAMGARA*YFKLYSRCLCL Trigger: GAGACAGAGACACCTGGAGTACAGCTTGAAATAGCAAGCTCTTGCTCCCATAGCTTCTGCACATTCTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTCCCATTTTCTCAGGGTaGGAGAGATGGCTCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: CYFCQPRPSTCPILPYPSPIFSG*ERWLNT Trigger: AGTATTGAGCCATCTCTCCAACCCTGAGAAAATGGG...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTTTACATCACTTCCTTTaGAGCCAAATTGCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGFWSSGLNSSLASFPLCLHHFL*SQIAQA Trigger: AGCCTGTGCAATTTGGCTCAAAAGGAAGTGATGTAA...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAAATAATAAAGTATCATaGAGTGCTACAGCCCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVNNKVS*SATAQR Trigger: GCGCTGGGCTGTAGCACTCAATGATACTTTATTATT...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | ATGAATGTAGAGTTAGATTCTTTCACAGCCTTTTGGTaGCAAAGAGCTGGACAGTACAGCGGAAAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: MNVELDSFTAFW*QRAGQYSGKHP Trigger: TGGGTGCTTTCCGCTGTACTGTCCAGCTCTTTGTCACCAAAAGGCTGTGAAAGAATCTAACTCTACATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | GGGCCTGGAATTGTAGGTGATGGATCATGTGGGTGTTaGAAATCGAAACAGAATTCTGCAAGAGCAATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GPGIVGDGSCGC*KSKQNSARAIS Trigger: ACTGATTGCTCTTGCAGAATTCTGTTTCGATTTTCAACACCCACATGATCCATCACCTACAATTCCAGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CCA 72 bp | CAGAGAAGCCAGGTTCAATTTCTAACAGCCAGACATTaGATCAGAACAATCCTTGTAACTCCAGTCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRSQVQFLTARH*IRTILVTPVCH Trigger: GTGACAGACTGGAGTTACAAGGATTGTTCTGATCCAATGTCTGGCTGTTAGAAATTGAACCTGGCTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATAAGACAGAGTATATCCCTGTaGGGAGCTTTCACAAATATA | + |
|
Preference number: 3 (lower is better) Translates to: PASLAENSTSLPCTHIIRQSISL*GAFTNI Trigger: TATATTTGTGAAAGCTCCCAACAGGGATATACTCTG...TCTTATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTTTACATCACTTCCTTTaGAGCCAAATTGCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CYFCQPRPSTCPILPYPSLHHFL*SQIAQA Trigger: AGCCTGTGCAATTTGGCTCAAAAGGAAGTGATGTAA...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | GACAAGTCACATTTACATCAGAAAGACAGGAGATGGTaGAGAGACCTGCTTCTCTTGCAGAGAACTCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: DKSHLHQKDRRW*RDLLLLQRTLL Trigger: AAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCTGATGTAAATGTGACTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | CATGATGAAGAAAGAAGGAGTAGAGTGCTCCATGCATaGAGGATCGAAGTCAACAGAAGTTACACAGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HDEERRSRVLHA*RIEVNRSYTAH Trigger: ATGAGCTGTGTAACTTCTGTTGACTTCGATCCTTCATGCATGGAGCACTCTACTCCTTCTTTCTTCATCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTCTATATCACTGTAATTaGCTAAGGTCTTTCGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: KTGDGEETCFSCRELYFLLYHCN*LRSFAL Trigger: AAGTGCGAAAGACCTTAGCAAATTACAGTGATATAG...AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAAGAGACCTGCTTCTCTaGCAGAGAACTCTACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCSYITSFLHHFLLSQIARDLLL*QRTLLP Trigger: AGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCT...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | TTTTACCCTACCCATCTAACTTTATGTTTACTGTCCTaGGGTCTTCCCCAATTGTGTACCTTTATCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FYPTHLTLCLLS*GLPQLCTFICV Trigger: GACACAGATAAAGGTACACAATTGGGGAAGACCTCAGGACAGTAAACATAAAGTTAGATGGGTAGGGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CCA 72 bp | AAAAGTTTATGCTTTATCATCATCTTAGGAGCATTGTaGGAGCATGGTGACACCAATCTCATTGGTATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSLCFIIILGAL*EHGDTNLIGIV Trigger: AACTATACCAATGAGATTGGTGTCACCATGCTCCCACAATGCTCCTAAGATGATGATAAAGCATAAACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACACTATATCACTGTAATTaGCTAAGGTCTTTCGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: YKPHLHASSHGSSNTSFTLYHCN*LRSFAL Trigger: AAGTGCGAAAGACCTTAGCAAATTACAGTGATATAG...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCAACAGGTACAGAGCATGCACCTATTATACAGTTATAAATACAGGCAAACTATATCACTGTAATTaGCTAAGGTCTTTCGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SLNRYRACTYYTVINTGKLYHCN*LRSFAL Trigger: AAGTGCGAAAGACCTTAGCAAATTACAGTGATATAG...TTTGCCTGTATTTATAACTGTATAATAGGTGCATGCTCTGTACCTGTTGAGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | AGAAAAGGGCTTGACATAAATGCAGTGAGATTAACATaGCCAATGGATGTTACCTATAGACAAGTCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: RKGLDINAVRLT*PMDVTYRQVTF Trigger: AAATGTGACTTGTCTATAGGTAACATCCATTGGTCATGTTAATCTCACTGCATTTATGTCAAGCCCTTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR TCA 72 bp | TCGAAGTCAACAGAAGTTACACAGCTCATATCAAAGTaGAAAGCTTTTAGAGGGAAAAATCACATAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSTEVTQLISK*KAFRGKNHIEC Trigger: ACATTCTATGTGATTTTTCCCTCTAAAAGCTTTTCACTTTGATATGAGCTGTGTAACTTCTGTTGACTTCGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CCA 72 bp | TTCAGGATTCACAAGATGATTTATGACCACGCAATGTaGATGTATATTCTGTCTTCCCTAATTCATATATTC | + |
|
Preference number: 3 (lower is better) Translates to: FRIHKMIYDHAM*MYILSSLIHIF Trigger: GAATATATGAATTAGGGAAGACAGAATATACATCCACATTGCGTGGTCATAAATCATCTTGTGAATCCTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCATGGAAGGATGTGCCATaGAGACTTTGTCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SALTCAACAGLRVGVLTAWKDVP*RLCPEP Trigger: AGGCTCAGGACAAAGTCTGCATGGCACATCCTTCCA...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCATTCTGTAGAGAAGCTTaGAATTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SALTCAACAGLRVGVLTAFCREA*NSEGRG Trigger: TCCTCTACCTTCAGAATTCCAAGCTTCTCTACAGAA...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | ATCATAAGACGCATGACAGCTTGTAGCTCTAGCTCCTaGGGACCTAAAACCCTCTTCAGGCCTGTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIRRMTACSSSS*GPKTLFRPVRA Trigger: TGCCCGCACAGGCCTGAAGAGGGTTTTAGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCGTCTTATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTAGAAGGAGGACACTCTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSRRRTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCCCAGAGTGTCCTCCTTCT...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCAGTACCTGTGATGGAATaGATTAGGTTCATACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SALTCAACAGLRVGVLTAVPVME*IRFILI Trigger: AATAAGTATGAACCTAATCCATTCCATCACAGGTAC...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAGAAGGAGGACACTCTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGFWSSGLNSSLASFPLCRRRTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCCCAGAGTGTCCTCCTTCT...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTCCTCCTCCATCCAGATaGTCTGGGACTGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSPPPSR*SGTDGD Trigger: ATCACCATCAGTCCCAGAGCATCTGGATGGAGGAGG...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | CACATTTACATCAGAAAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAAGAAGGAGGACACTCTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYIRKTGDGEETCFSCRRRRTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCCCAGAGTGTCCTCCTTCT...TCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCTGATGTAAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGTCTTCCCCAATTGTGTACCTTTATCTGTGTCAGTATTTGTAGAGCAATGGCCTGGACCACAGTaGGGAGACTGCTGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVFPNCVPLSVSVFVEQWPGPQ*GDCWYR Trigger: TCTGTACCAGCAGTCTCCTCACTGTGGTCCAGGCCA...TTGCTCTACAAATACTGACACAGATAAAGGTACACAATTGGGGAAGACCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | AAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTCCTCCTCCATCCAGATaGTCTGGGACTGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGDGEETCFSCRELYFLPPPSR*SGTDGD Trigger: ATCACCATCAGTCCCAGAGCATCTGGATGGAGGAGG...AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | TTCTGTCTCAACCCTGAGGGAAGCTCTGCCTTCTCCTaGGTGTTCTATCATCTGCTGAACCCAGACACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FCLNPEGSSAFS*VFYHLLNPDTL Trigger: TAAAGTGTCTGGGTTCAGCAGATGATAGAACACCAAGGAGAAGGCAGAGCTTCCCTCAGGGTTGAGACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | TGCATTCATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTGGCCTGGACCACAGTaGGGAGACTGCTGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIHYLVYPISPEYIPVGSWPGPQ*GDCWYR Trigger: TCTGTACCAGCAGTCTCCTCACTGTGGTCCAGGCCA...GCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATGAATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAGAAGCCCATCCCTGTaGATCAGCACAAAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KGFWSSGLNSSLASFPLCRSPSL*ISTKGL Trigger: TAGCCCTTTTGTGCTGATTCACAGGGATGGGCTTCT...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATAAGAACATGTTTCCCAGAGTaGCAAGCACTGTCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PASLAENSTSLPCTHIIRTCFPE*QALSWR Trigger: CCTCCATGACAGTGCTTGGCACTCTGGGAAACATGT...TCTTATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226157.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCATGGCCTGGACCACAGTaGGGAGACTGCTGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIAWPGPQ*GDCWYR Trigger: TCTGTACCAGCAGTCTCCTCACTGTGGTCCAGGCCA...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTAGAAGCCCATCCCTGTaGATCAGCACAAAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CYFCQPRPSTCPILPYPSRSPSL*ISTKGL Trigger: TAGCCCTTTTGTGCTGATTCACAGGGATGGGCTTCT...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGTCTTCCCCAATTGTGTACCTTTATCTGTGTCAGTATTTGTAGAGCAAAGAAGCCCATCCCTGTaGATCAGCACAAAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PEVFPNCVPLSVSVFVEQRSPSL*ISTKGL Trigger: TAGCCCTTTTGTGCTGATTCACAGGGATGGGCTTCT...TTGCTCTACAAATACTGACACAGATAAAGGTACACAATTGGGGAAGACCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTACATGTTTCCCAGAGTaGCAAGCACATATAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSTCFPE*QAHITH Trigger: GTGAGTTATATGTGCTTGGCACTCTGGGAAACATGT...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227326.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAATATCATGTAGCCACTaGCCCCTCCCAGGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIAISCSH*PLPGHS Trigger: AGAGTGCCCTGGGAGGGGCCAGTGGCTACATGATAT...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | TCACATAGAATGTGCAGAAGCTATGGGAGCAAGAGCTaGCTATTTCAAGCTGTACTCCAGGTGTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHRMCRSYGSKS*LFQAVLQVSLS Trigger: AGACAGAGACACCTGGAGTACAGCTTGAAATAGCAAGCTCTTGCTCCCATAGCTTCTGCACATTCTATGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTTTCACACATGTTTCCCAGAGTaGCAAGCACTGTCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYLVYPISPEYIPVGSFHTCFPE*QALSWR Trigger: CCTCCATGACAGTGCTTGGCACTCTGGGAAACATGT...GTGAAAGCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226157.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTTTCACTGGAAGGATGTGCCATaGAGACTTTGTCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HYLVYPISPEYIPVGSFHWKDVP*RLCPEP Trigger: AGGCTCAGGACAAAGTCTGCATGGCACATCCTTCCA...GTGAAAGCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTACATCAGAAAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAAAGAATGGAAGGATGTaGCATGCAGACTTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HIYIRKTGDGEETCFSCRKNGRM*HADFVL Trigger: CAGGACAAAGTCTGCATGGCACATCCTTCCATTCTT...TCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCTGATGTAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACAATATCATGTAGCCACTaGCCCCTCCCAGGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKPHLHASSHGSSNTSFTISCSH*PLPGHS Trigger: AGAGTGCCCTGGGAGGGGCCAGTGGCTACATGATAT...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCAACAGGTACAGAGCATGCACCTATTATACAGTTATAAATACAGGCAAAATATCATGTAGCCACTaGCCCCTCCCAGGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNRYRACTYYTVINTGKISCSH*PLPGHS Trigger: AGAGTGCCCTGGGAGGGGCCAGTGGCTACATGATAT...TTTGCCTGTATTTATAACTGTATAATAGGTGCATGCTCTGTACCTGTTGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTTTCTGTAGAGAAGCTTaGAATTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSFCREA*NSEGRG Trigger: TCCTCTACCTTCAGAATTCCAAGCTTCTCTACAGAA...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | CCAGAGAAGCCAGGTTCAATTTCTAACAGCCAGACATaGGATCAGAACAATCCTTGTAACTCCAGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEKPGSISNSQT*DQNNPCNSSLS Trigger: TGACAGACTGGAGTTACAAGGATTGTTCTGATCCAATGTCTGGCTGTTAGAAATTGAACCTGGCTTCTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTGGCTTCCCCACCAACTaGACATATAATTCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGFWSSGLNSSLASFPLCGFPTN*TYNSQK Trigger: TTTTTGTGAATTATATGTTCAGTTGGTGGGGAAGCC...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATTCTCAAACCAAAAGCTaGTATTGTCTTTTGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ETCFSCRELYFLTLYPHHSQTKS*YCLLQS Trigger: GGATTGCAAAAGACAATAGCAGCTTTTGGTTTGAGA...ATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTACTTTTACTCACTGAGTTCTCAAACCAAAAGCTaGTATTGTCTTTTGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FRDRSGCLGVSRYFYSLSSQTKS*YCLLQS Trigger: GGATTGCAAAAGACAATAGCAGCTTTTGGTTTGAGA...ACTCAGTGAGTAAAAGTACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAAAAGGGCTAAAAGTTaGATAACCAAGGGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGFWSSGLNSSLASFPLCKRAKS*ITKGQK Trigger: TTTCTGGCCCTTGGTTATGCAACTTTTAGCCCTTTT...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTTTTCCAGGTAGACAATaGTCTTACAGCCTATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CYFCQPRPSTCPILPYPSFPGRQ*SYSLCH Trigger: ATGACATAGGCTGTAAGAGCATTGTCTACCTGGAAA...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACATGGAAGGATGTGCCATaGAGACTTTGTCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKPHLHASSHGSSNTSFTWKDVP*RLCPEP Trigger: AGGCTCAGGACAAAGTCTGCATGGCACATCCTTCCA...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTTTCACAAGAATGGAAGGATGTaGCATGCAGACTTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HYLVYPISPEYIPVGSFHKNGRM*HADFVL Trigger: CAGGACAAAGTCTGCATGGCACATCCTTCCATTCTT...GTGAAAGCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTACATCAGAAAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAAAAAGGGCTAAAAGTTaGATAACCAAGGGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIYIRKTGDGEETCFSCRKRAKS*ITKGQK Trigger: TTTCTGGCCCTTGGTTATGCAACTTTTAGCCCTTTT...TCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTTTCTGATGTAAATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTATTTGTAAAAGCCAAGTaGATGAGAATGAGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVFVKAK*MRMRCM Trigger: CATACACCTCATTCTCATCCACTTGGCTTTTACAAA...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAAAGAATGGAAGGATGTaGCATGCAGACTTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIAKNGRM*HADFVL Trigger: CAGGACAAAGTCTGCATGGCACATCCTTCCATTCTT...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TGTTATTTCTGCCAACCAAGACCTTCCACATGCCCTATTTTACCCTACCCATCTTTTGTAAAAGCCAAGTaGATGAGAATGAGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CYFCQPRPSTCPILPYPSFVKAK*MRMRCM Trigger: CATACACCTCATTCTCATCCACTTGGCTTTTACAAA...AGATGGGTAGGGTAAAATAGGGCATGTGGAAGGTCTTGGTTGGCAGAAATAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | TGCATTCATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTTCTGTAGAGAAGCTTaGAATTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIHYLVYPISPEYIPVGSFCREA*NSEGRG Trigger: TCCTCTACCTTCAGAATTCCAAGCTTCTCTACAGAA...GCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATGAATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | CTGAGTCACCTCTCCAGTCACCGTCTATTCTTAATATaGAAAAACCTCTCCATCACTCAGACTAAACACATT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLSSHRLFLI*KNLSITQTKHI Trigger: AATGTGTTTAGTCTGAGTGATGGAGAGGTTTTTCAATATTAAGAATAGACGGTGACTGGAGAGGTGACTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCAACAGGTACAGAGCATGCACCTATTATACAGTTATAAATACAGGCAAAGGCTTCCCCACCAACTaGACATATAATTCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNRYRACTYYTVINTGKGFPTN*TYNSQK Trigger: TTTTTGTGAATTATATGTTCAGTTGGTGGGGAAGCC...TTTGCCTGTATTTATAACTGTATAATAGGTGCATGCTCTGTACCTGTTGAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAGCTGCTATTGTCTTTTaGAATCCTTTTGTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIAAAIVF*NPFVRR Trigger: CCTTCTTACAAAAGGATTGCAAAAGACAATAGCAGC...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCATCTCAAACCAAAAGCTaGTATTGTCTTTTGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIASQTKS*YCLLQS Trigger: GGATTGCAAAAGACAATAGCAGCTTTTGGTTTGAGA...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACATTTCCAGGTAGACAATaGTCTTACAGCCTATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKPHLHASSHGSSNTSFTFPGRQ*SYSLCH Trigger: ATGACATAGGCTGTAAGAGCATTGTCTACCTGGAAA...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACAAAAAGGGCTAAAAGTTaGATAACCAAGGGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YKPHLHASSHGSSNTSFTKRAKS*ITKGQK Trigger: TTTCTGGCCCTTGGTTATGCAACTTTTAGCCCTTTT...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | CATTATCTAGTTTATCCCATATCTCCAGAGTATATCCCTGTTGGGAGCTTTCACGTACCTGTGATGGAATaGATTAGGTTCATACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HYLVYPISPEYIPVGSFHVPVME*IRFILI Trigger: AATAAGTATGAACCTAATCCATTCCATCACAGGTAC...GTGAAAGCTCCCAACAGGGATATACTCTGGAGATATGGGATAAACTAGATAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | AGCCAAATTGCACAGGCTGATTTAAAAGGTGTTGATTaGTCTGGTTCTTTATGTCAGATACTTAGAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIAQADLKGVD*SGSLCQILRKG Trigger: CCCTTTTCTAAGTATCTGACATAAAGAACCAGACAAATCAACACCTTTTAAATCAGCCTGTGCAATTTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCAACAGGTACAGAGCATGCACCTATTATACAGTTATAAATACAGGCAAAGCTGCTATTGTCTTTTaGAATCCTTTTGTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNRYRACTYYTVINTGKAAIVF*NPFVRR Trigger: CCTTCTTACAAAAGGATTGCAAAAGACAATAGCAGC...TTTGCCTGTATTTATAACTGTATAATAGGTGCATGCTCTGTACCTGTTGAGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR GCA 90 bp | TACAAACCTCATCTTCATGCTTCCAGCCATGGTAGTAGTAATACTAGTTTTACAGCTGCTATTGTCTTTTaGAATCCTTTTGTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKPHLHASSHGSSNTSFTAAIVF*NPFVRR Trigger: CCTTCTTACAAAAGGATTGCAAAAGACAATAGCAGC...TGTAAAACTAGTATTACTACTACCATGGCTGGAAGCATGAAGATGAGGTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTTCTTACATCACTTCCTTCTTACATCACTTCCTTTTGAGCCAAATTGCAGTACCTGTGATGGAATaGATTAGGTTCATACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PCSYITSFLHHFLLSQIAVPVME*IRFILI Trigger: AATAAGTATGAACCTAATCCATTCCATCACAGGTAC...TGCAATTTGGCTCAAAAGGAAGTGATGTAAGAAGGAAGTGATGTAAGAACATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| 3UTR CAA 72 bp | TTAAAAAGTTTATGCTTTATCATCATCTTAGGAGCATaGTGGGAGCATGGTGACACCAATCTCATTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LKSLCFIIILGA*WEHGDTNLIGI Trigger: TATACCAATGAGATTGGTGTCACCATGCTCCCACAATGCTCCTAAGATGATGATAAAGCATAAACTTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| CDS CCA 90 bp | CACTCTGGGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAATTCTGAAGGTAGAGGACATGCTGGTGGTGCTTGTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSGQLSAQGEFCREA*NSEGRGHAGGACGE Trigger: TTCTCCACAAGCACCACCAGCATGTCCTCTACCTTCAGAATTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCCCAGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTCACCTGTGCAGCCTGTGCAGGGCTCAGGGTGGGTGTCCTCACAGCAAGCTGCTATTGTCTTTaGCAATCCTTTTGTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SALTCAACAGLRVGVLTASCYCL*QSFCKK Trigger: CTTCTTACAAAAGGATTGCAAAAGACAATAGCAGCT...TGCTGTGAGGACACCCACCCTGAGCCCTGCACAGGCTGCACAGGTGAGTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| CDS GCA 90 bp | ATTAAACCATTGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTaGCATGCAGACTTTGTCCTGAGCCTCCTCCATCCAGATGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKPLSIQKNSKNGRM*HADFVLSLLHPDAL Trigger: CAGAGCATCTGGATGGAGGAGGCTCAGGACAAAGTCTGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAATGGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | GAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATTTTACCATCAAGGTTTaGTCCCTTGAAGAGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ETCFSCRELYFLTLYPHHFTIKV*SLEERL Trigger: AAGTCTCTCTTCAAGGGACAAAACCTTGATGGTAAA...ATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS GCA 90 bp | AACCAGAAGCCCATCCCTGTGAATCAGCACAAAAGGGCTAAAAGTTaGATAACCAAGGGCCAGAAATTCTTGAGTATTTACCATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQKPIPVNQHKRAKS*ITKGQKFLSIYHQG Trigger: ACCTTGATGGTAAATACTCAAGAATTTCTGGCCCTTGGTTATGCAACTTTTAGCCCTTTTGTGCTGATTCACAGGGATGGGCTTCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | GAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATAGCTGCTATTGTCTTTaGCAATCCTTTTGTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETCFSCRELYFLTLYPHHSCYCL*QSFCKK Trigger: CTTCTTACAAAAGGATTGCAAAAGACAATAGCAGCT...ATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | AAGACAGGAGATGGTGAAGAGACCTGCTTCTCTTGCAGAGAACTCTACTTCCTTTTTACCATCAAGGTTTaGTCCCTTGAAGAGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: KTGDGEETCFSCRELYFLFTIKV*SLEERL Trigger: AAGTCTCTCTTCAAGGGACAAAACCTTGATGGTAAA...AAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGGTCTCTTCACCATCTCCTGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAAGGGCCAGAAATTCTaGAGTATTTACCATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGFWSSGLNSSLASFPLCKGQKF*SIYHQG Trigger: ACCTTGATGGTAAATACTCAAGAATTTCTGGCCCTT...ACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTCTCTTGCAGAGAACTCTACTTCCTTACCCTGTACCCACATCATAAGAAAGGGCCAGAAATTCTaGAGTATTTACCATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PASLAENSTSLPCTHIIRKGQKF*SIYHQG Trigger: ACCTTGATGGTAAATACTCAAGAATTTCTGGCCCTT...TCTTATGATGTGGGTACAGGGTAAGGAAGTAGAGTTCTCTGCAAGAGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTCTGGTCCTCAGGTCTTAACTCCAGTCTTGCCTCTTTCCCTTTATGTAAGCTGCTATTGTCTTTaGCAATCCTTTTGTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVSGPQVLTPVLPLSLYVSCYCL*QSFCKK Trigger: CTTCTTACAAAAGGATTGCAAAAGACAATAGCAGCT...TACATAAAGGGAAAGAGGCAAGACTGGAGTTAAGACCTGAGGACCAGAAACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGTCTTCCCCAATTGTGTACCTTTATCTGTGTCAGTATTTGTAGAGCAAAAGGGCCAGAAATTCTaGAGTATTTACCATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEVFPNCVPLSVSVFVEQKGQKF*SIYHQG Trigger: ACCTTGATGGTAAATACTCAAGAATTTCTGGCCCTT...TTGCTCTACAAATACTGACACAGATAAAGGTACACAATTGGGGAAGACCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS GCA 72 bp | TTGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTaGCATGCAGACTTTGTCCTGAGCCTCCTCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSIQKNSKNGRM*HADFVLSLLHP Trigger: TGGATGGAGGAGGCTCAGGACAAAGTCTGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS GCA 72 bp | CCCATCCCTGTGAATCAGCACAAAAGGGCTAAAAGTTaGATAACCAAGGGCCAGAAATTCTTGAGTATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PIPVNQHKRAKS*ITKGQKFLSIY Trigger: GTAAATACTCAAGAATTTCTGGCCCTTGGTTATGCAACTTTTAGCCCTTTTGTGCTGATTCACAGGGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
||
| CDS CAA 90 bp | CCTGTACCTGTGATGGAATGGATTAGGTTCATACTTATTAAACCATaGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTGCCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVPVMEWIRFILIKP*SIQKNSKNGRMCHA Trigger: TGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAATGGTTTAATAAGTATGAACCTAATCCATTCCATCACAGGTACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| CDS TCA 72 bp | CATAAAATAGCAATAGCTGTCTCTATTCTCAAGCTGTaGTATATTAAAACCTGTACCTGTGATGGAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: HKIAIAVSILKL*YIKTCTCDGMD Trigger: ATCCATTCCATCACAGGTACAGGTTTTAATATATCACAGCTTGAGAATAGAGACAGCTATTGCTATTTTATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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| CDS CAA 72 bp | GTGATGGAATGGATTAGGTTCATACTTATTAAACCATaGAGTATCCAAAAGAATAGCAAGAATGGAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VMEWIRFILIKP*SIQKNSKNGRM Trigger: CATCCTTCCATTCTTGCTATTCTTTTGGATACTCAATGGTTTAATAAGTATGAACCTAATCCATTCCATCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074324.5 ENSMUST00000226157.2 ENSMUST00000227326.2 ENSMUST00000228726.2 |
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