RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115253

Ensembl transcript IDs: ENSMUST00000226808.2, ENSMUST00000227909.2

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACAGAGTTCCACTTCCTATCCCTCATCCCCTTCTTCTCTGATATaGTGTCCCACCCCATTGTATTACACCGCCCAGGCAATAAAGTCT +
Preference number: 1 (lower is better)
Translates to: SQSSTSYPSSPSSLI*CPTPLYYTAQAIKS
Trigger: AGACTTTATTGCCTGGGCGGTGTAATACAATGGGGTGGGACACCATATCAGAGAAGAAGGGGATGAGGGATAGGAAGTGGAACTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 90 bp AGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGAACAGCTTaGTTGTACAAGCAGGGCTATCTTGTCTGGGTCAACACCACCTGG +
Preference number: 1 (lower is better)
Translates to: SRTDRAVVKTFLRTA*LYKQGYLVWVNTTW
Trigger: CCAGGTGGTGTTGACCCAGACAAGATAGCCCTGCTTGTACAATCAAGCTGTTCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CCA 90 bp GTATCTTGTGATTCATGTGAAAGAGTTGTCTATGAGCCCCTGACCTaGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACA +
Preference number: 1 (lower is better)
Translates to: VSCDSCERVVYEPLT*GREQSRTDRAVVKT
Trigger: TGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCAGGTCAGGGGCTCATAGACAACTCTTTCACATGAATCACAAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 90 bp ACTCCTGGGCATATACTCAAAAGGTGCTTCAATATCTCAGAATCTTaGTCAATTATGTTCATAGCAGTCAGAAGCTGGAAACAACCTAGA +
Preference number: 1 (lower is better)
Translates to: TPGHILKRCFNISES*SIMFIAVRSWKQPR
Trigger: TCTAGGTTGTTTCCAGCTTCTGACTGCTATGAACATAATTGAGCAAGATTCTGAGATATTGAAGCACCTTTTGAGTATATGCCCAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 90 bp TTGGAGAGAAAGCTTAGAAAGTCACTATCAGCAAGGATCTCCTTTTaGGTAAACTCGGCAGCAAGGGAATATTCATTTTACAAAGGAGAA +
Preference number: 1 (lower is better)
Translates to: LERKLRKSLSARISF*VNSAAREYSFYKGE
Trigger: TTCTCCTTTGTAAAATGAATATTCCCTTGCTGCCGAGTTTACTCAAAAGGAGATCCTTGCTGATAGTGACTTTCTAAGCTTTCTCTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CCA 90 bp AAACAACCTAGATGTCCCTCAACTGAAGAAGGGATAAAGAAAATTTaGTACATCTACACAGTGAAGTATTATTCGGCTATTTGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: KQPRCPSTEEGIKKI*YIYTVKYYSAIWEG
Trigger: CCCTTCCCAAATAGCCGAATAATACTTCACTGTGTAGATGTACCAAATTTTCTTTATCCCTTCTTCAGTTGAGGGACATCTAGGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 90 bp GAAATCAATGTTGGGGTTTCTCTGCAAACAAGGAATAATTCTACATaGAGATTCAGATATAACACTCCTGGGCATATACTCAAAAGGTGC +
Preference number: 1 (lower is better)
Translates to: EINVGVSLQTRNNST*RFRYNTPGHILKRC
Trigger: GCACCTTTTGAGTATATGCCCAGGAGTGTTATATCTGAATCTTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 90 bp ACAGAAAGAGCAGGTGACAGCCAACATTGCCTTCTGGCATCCATGTaGATATATATATATATATATATATATGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: TERAGDSQHCLLASM*IYIYIYIYVCVCVC
Trigger: ACACACACACACACACACATATATATATATATATATATATATGCACATGGATGCCAGAAGGCAATGTTGGCTGTCACCTGCTCTTTCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 90 bp TGTAAACTTGTGCAACCACACTGGAAATCAATGTTGGGGTTTCTCTaGAAACAAGGAATAATTCTACATGAAGATTCAGATATAACACTC +
Preference number: 1 (lower is better)
Translates to: CKLVQPHWKSMLGFL*KQGIILHEDSDITL
Trigger: GAGTGTTATATCTGAATCTTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTCCAGTGTGGTTGCACAAGTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR TCA 90 bp TGGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGACATCCCCTTCTTCTCTaGTATGGTGTCCCACCCCAT +
Preference number: 2 (lower is better)
Translates to: WGREQSRTDRAVVKTFLRHPLLL*YGVPPH
Trigger: ATGGGGTGGGACACCATATCAGAGAAGAAGGGGATG...TCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CAA 90 bp GGGCCGACAGGAGAACACTCTTCCATTGCTGATGGAAATGTAAACTaGTGCAACCACACTGGAAATCAATGTTGGGGTTTCTCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: GPTGEHSSIADGNVN*CNHTGNQCWGFSAN
Trigger: GTTTGCAGAGAAACCCCAACATTGATTTCCAGTGTGGTTGCACAAGTTTACATTTCCATCAGCAATGGAAGAGTGTTCTCCTGTCGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR TCA 90 bp TGGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGAACAGGAACAAAATCCTaGTGCCCTGTAATCTTTCTG +
Preference number: 2 (lower is better)
Translates to: WGREQSRTDRAVVKTFLRTGTKS*CPVIFL
Trigger: CAGAAAGATTACAGGGCATCAGGATTTTGTTCCTGT...TCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR CCA 90 bp TGGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGAAGAACTGTTGGGGAATaGATTCCATTACAGACAGCA +
Preference number: 2 (lower is better)
Translates to: WGREQSRTDRAVVKTFLRRTVGE*IPLQTA
Trigger: TGCTGTCTGTAATGGAATCCATTCCCCAACAGTTCT...TCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR CCA 90 bp TGGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGAACAAGGCAGAACTGTTaGGGAATGGATTCCATTACA +
Preference number: 2 (lower is better)
Translates to: WGREQSRTDRAVVKTFLRTRQNC*GMDSIT
Trigger: TGTAATGGAATCCATTCCCCAACAGTTCTGCCTTGT...TCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR GCA 90 bp CACTGGAAATCAATGTTGGGGTTTCTCTGCAAACAAGGAATAATTCTACATGAAGGAACAGGCACAATTTaGTGGGGAATTCACGTGGAG +
Preference number: 2 (lower is better)
Translates to: HWKSMLGFLCKQGIILHEGTGTI*WGIHVE
Trigger: CTCCACGTGAATTCCCCAGCAAATTGTGCCTGTTCC...TTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp CTTTCGAGCCTTGTGACCGTTATCTCCTGTGTGGGATaGATGTCAGTCCGGAGCTCCCTCATTAAACGACCT +
Preference number: 3 (lower is better)
Translates to: LSSLVTVISCVG*MSVRSSLIKRP
Trigger: AGGTCGTTTAATGAGGGAGCTCCGGACTGACATGCATCCCACACAGGAGATAACGGTCACAAGGCTCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp TCAACACCACCTGGCCGGAACCTCCCCTCTGTCTACTaGCCCTTGATGCCTGGTAAAGTCATATATCAACTG +
Preference number: 3 (lower is better)
Translates to: STPPGRNLPSVY*PLMPGKVIYQL
Trigger: CAGTTGATATATGACTTTACCAGGCATCAAGGGGCAGTAGACAGAGGGGAGGTTCCGGCCAGGTGGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 72 bp CTTGTGATTCATGTGAAAGAGTTGTCTATGAGCCCCTaGCCTGGGGCCGAGAACAAAGCAGAACAGACAGGG +
Preference number: 3 (lower is better)
Translates to: LVIHVKELSMSP*PGAENKAEQTG
Trigger: CCCTGTCTGTTCTGCTTTGTTCTCGGCCCCAGGTCAGGGGCTCATAGACAACTCTTTCACATGAATCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CCA 72 bp GATTCATGTGAAAGAGTTGTCTATGAGCCCCTGACCTaGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTT +
Preference number: 3 (lower is better)
Translates to: DSCERVVYEPLT*GREQSRTDRAV
Trigger: AACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCAGGTCAGGGGCTCATAGACAACTCTTTCACATGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR CAA 90 bp CTCATCCCCTTCTTCTCTGATATGGTGTCCCACCCCATTGTATTACACCGCCCATCCAATTTCAGGATTTaGCATGACATCTCACCTCTG +
Preference number: 3 (lower is better)
Translates to: LIPFFSDMVSHPIVLHRPSNFRI*HDISPL
Trigger: CAGAGGTGAGATGTCATGCAAAATCCTGAAATTGGA...TGGGCGGTGTAATACAATGGGGTGGGACACCATATCAGAGAAGAAGGGGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR-3UTR CAA 90 bp TGGGGCCGAGAACAAAGCAGAACAGACAGGGCTGTTGTTAAGACATTCCTAAGAAACAAGGCAGAACTGTaGGGGAATGGATTCCATTAC +
Preference number: 3 (lower is better)
Translates to: WGREQSRTDRAVVKTFLRNKAEL*GNGFHY
Trigger: GTAATGGAATCCATTCCCCAACAGTTCTGCCTTGTT...TCTTAGGAATGTCTTAACAACAGCCCTGTCTGTTCTGCTTTGTTCTCGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CCA 72 bp CCAGCTGATGCTAAACAAGGCAGAACTGTTGGGGAATaGATTCCATTACAGACAGCAACTTTAGGAACAGGC +
Preference number: 3 (lower is better)
Translates to: PADAKQGRTVGE*IPLQTATLGTG
Trigger: GCCTGTTCCTAAAGTTGCTGTCTGTAATGGAATCCATTCCCCAACAGTTCTGCCTTGTTTAGCATCAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 72 bp GACAGGGCTGTTGTTAAGACATTCCTAAGAACAGCTTaGTTGTACAAGCAGGGCTATCTTGTCTGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: DRAVVKTFLRTA*LYKQGYLVWVN
Trigger: GTTGACCCAGACAAGATAGCCCTGCTTGTACAATCAAGCTGTTCTTAGGAATGTCTTAACAACAGCCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 72 bp CAAGATAGGGCCGACAGGAGAACACTCTTCCATTGCTaGTGGAAATGTAAACTTGTGCAACCACACTGGAAA +
Preference number: 3 (lower is better)
Translates to: QDRADRRTLFHC*WKCKLVQPHWK
Trigger: TTTCCAGTGTGGTTGCACAAGTTTACATTTCCATCAGCAATGGAAGAGTGTTCTCCTGTCGGCCCTATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp GGCAAAGACAGGCTTAAGCAGGTCGTGCTGAGTAACTaGAGTAAGGAAGTGATTGAGACAGTTTTCAAAACC +
Preference number: 3 (lower is better)
Translates to: GKDRLKQVVLSN*SKEVIETVFKT
Trigger: GGTTTTGAAAACTGTCTCAATCACTTCCTTACTGCAGTTACTCAGCACGACCTGCTTAAGCCTGTCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 72 bp ATGCCTGGTAAAGTCATATATCAACTGGTTGCTATGTaGACAAAGATAAGCCCCCAGCCCACAGGAACAAAA +
Preference number: 3 (lower is better)
Translates to: MPGKVIYQLVAM*TKISPQPTGTK
Trigger: TTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTTCACATAGCAACCAGTTGATATATGACTTTACCAGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR TCA 72 bp AAGCTTAGAAAGTCACTATCAGCAAGGATCTCCTTTTaGGTAAACTCGGCAGCAAGGGAATATTCATTTTAC +
Preference number: 3 (lower is better)
Translates to: KLRKSLSARISF*VNSAAREYSFY
Trigger: GTAAAATGAATATTCCCTTGCTGCCGAGTTTACTCAAAAGGAGATCCTTGCTGATAGTGACTTTCTAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp GCAAAACAAACAGAAAGAGCAGGTGACAGCCAACATTaGCTTCTGGCATCCATGTGCATATATATATATATA +
Preference number: 3 (lower is better)
Translates to: AKQTERAGDSQH*LLASMCIYIYI
Trigger: TATATATATATATATGCACATGGATGCCAGAAGGCAATGTTGGCTGTCACCTGCTCTTTCTGTTTGTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp GTGCAACCACACTGGAAATCAATGTTGGGGTTTCTCTaGAAACAAGGAATAATTCTACATGAAGATTCAGAT +
Preference number: 3 (lower is better)
Translates to: VQPHWKSMLGFL*KQGIILHEDSD
Trigger: ATCTGAATCTTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTCCAGTGTGGTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp GCAGGTGACAGCCAACATTGCCTTCTGGCATCCATGTaGATATATATATATATATATATATATGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: AGDSQHCLLASM*IYIYIYIYVCV
Trigger: CACACACACATATATATATATATATATATATATGCACATGGATGCCAGAAGGCAATGTTGGCTGTCACCTGC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR GCA 72 bp CATATACTCAAAAGGTGCTTCAATATCTCAGAATCTTaGTCAATTATGTTCATAGCAGTCAGAAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: HILKRCFNISES*SIMFIAVRSWK
Trigger: TTTCCAGCTTCTGACTGCTATGAACATAATTGAGCAAGATTCTGAGATATTGAAGCACCTTTTGAGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
CDS-3UTR TCA 90 bp CTCATCCCCTTCTTCTCTGATATGGTGTCCCACCCCATTGTATTACACCGCCCAACAGGTCCCCTCCGGTaGGGAACACCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: LIPFFSDMVSHPIVLHRPTGPLR*GTPLCE
Trigger: TTCACATAATGGTGTTCCTCACCGGAGGGGACCTGT...TGGGCGGTGTAATACAATGGGGTGGGACACCATATCAGAGAAGAAGGGGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
CDS-3UTR TCA 90 bp CTGGGCTGTACATCTGCTACATATGTGCTAGGGACATTAAAGTTTAAAAGAAACTCTGAACCCTCAGGATaGCTGTGTCATACCTCCACA +
Preference number: 4 (lower is better)
Translates to: LGCTSATYVLGTLKFKRNSEPSG*LCHTST
Trigger: TGTGGAGGTATGACACAGTCATCCTGAGGGTTCAGA...GTTTCTTTTAAACTTTAATGTCCCTAGCACATATGTAGCAGATGTACAGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
3UTR CAA 72 bp GGAGAACACTCTTCCATTGCTGATGGAAATGTAAACTaGTGCAACCACACTGGAAATCAATGTTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GEHSSIADGNVN*CNHTGNQCWGF
Trigger: GAAACCCCAACATTGATTTCCAGTGTGGTTGCACAAGTTTACATTTCCATCAGCAATGGAAGAGTGTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
CDS-3UTR TCA 90 bp CACTGGAAATCAATGTTGGGGTTTCTCTGCAAACAAGGAATAATTCTACATGAATGCTTGCACTGCCTCTaGTGTCTACATAAGATAATC +
Preference number: 4 (lower is better)
Translates to: HWKSMLGFLCKQGIILHECLHCL*CLHKII
Trigger: GATTATCTTATGTAGACATCAGAGGCAGTGCAAGCA...TTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
CDS-3UTR CAA 90 bp CACTGGAAATCAATGTTGGGGTTTCTCTGCAAACAAGGAATAATTCTACATGAAGTGAATGAAAGTCAGTaGACAGGAGATCAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: HWKSMLGFLCKQGIILHEVNESQ*TGDQVC
Trigger: ACAGACTTGATCTCCTGTCAACTGACTTTCATTCAC...TTCATGTAGAATTATTCCTTGTTTGCAGAGAAACCCCAACATTGATTTCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227909.2
CDS TCA 72 bp GATAGGCATACATCAAAAACTTCTGAACCCTCAGGATaGCTGTGTCATACCTCCACAACAGAACTGATATGG +
Preference number: 6 (lower is better)
Translates to: DRHTSKTSEPSG*LCHTSTTELIW
Trigger: CCATATCAGTTCTGTTGTGGAGGTATGACACAGTCATCCTGAGGGTTCAGAAGTTTTTGATGTATGCCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226808.2
ENSMUST00000227909.2
CDS TCA 72 bp GAACATAGAAGATCCGGCTACTACTGTAGGAAAAGCTaGAAGACCAAATACATAAGAAAACATAGACCATGT +
Preference number: 6 (lower is better)
Translates to: EHRRSGYYCRKS*KTKYIRKHRPC
Trigger: ACATGGTCTATGTTTTCTTATGTATTTGGTCTTTCAGCTTTTCCTACAGTAGTAGCCGGATCTTCTATGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226808.2
ENSMUST00000227909.2