Pregenerated sensors for VMN1R199 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069292Ensembl transcript IDs: ENSMUST00000091732.4, ENSMUST00000227685.2, ENSMUST00000227689.2, ENSMUST00000227846.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGAAACCCCCATCCCATCCTCCCTTTCCCTGCTTCTATTAGGGTaGTTGACCACTTATTCACCCACTCCCAACTCCGTGCCCTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PETPIPSSLSLLLLG*LTTYSPTPNSVPWH Trigger: ATGCCAGGGCACGGAGTTGGGAGTGGGTGAATAAGTGGTCAAGCACCCTAATAGAAGCAGGGAAAGGGAGGATGGGATGGGGGTTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR GCA 90 bp | ACAGGGTTTACTCTTACCTGTTCCTTAGAGATTTATACCCAGCAATaGCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: TGFTLTCSLEIYTQQ*QALTSWSELASLPD Trigger: ATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGGTATAAATCTCTAAGGAACAGGTAAGAGTAAACCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CCA 90 bp | ATTACTTCAGTACCATCCATTAAATCCAGTCAATCACAGGGCATTTaGGGATCTCTTCCAGTCTGTACAGACCTCAGGCATTCACATGCT | + |
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Preference number: 1 (lower is better) Translates to: ITSVPSIKSSQSQGI*GSLPVCTDLRHSHA Trigger: AGCATGTGAATGCCTGAGGTCTGTACAGACTGGAAGAGATCCCCAAATGCCCTGTGATTGACTGGATTTAATGGATGGTACTGAAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CCA 90 bp | TGTTCCTTAGAGATTTATACCCAGCAATGCCAAGCACTTACTAGCTaGAGTGAATTGGCTTCTCTCCCTGATCATCTCCACTTTGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: CSLEIYTQQCQALTS*SELASLPDHLHFVS Trigger: ACTTACAAAGTGGAGATGATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGGTATAAATCTCTAAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR GCA 90 bp | AATGCTTATAGTTCCTTGCCTCGATGTTTGCTTGTAAATACCATGTaGCTGAACAGCAGTATTGAGGATGAAGCTCTAAACTCTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: NAYSSLPRCLLVNTM*LNSSIEDEALNSGS Trigger: GCTTCCAGAGTTTAGAGCTTCATCCTCAATACTGCTGTTCAGGCACATGGTATTTACAAGCAAACATCGAGGCAAGGAACTATAAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CCA 90 bp | CACAGCAAGGATAGGTGCCTCTCTGGGAATTCTACAGCAAAAGACTaGAAAACTCATGGTTTGTATACATTTGGATCCTCTGATTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: HSKDRCLSGNSTAKD*KTHGLYTFGSSDSL Trigger: TAAGGAATCAGAGGATCCAAATGTATACAAACCATGAGTTTTCCAGTCTTTTGCTGTAGAATTCCCAGAGAGGCACCTATCCTTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR GCA 90 bp | ATAACACCAATGAAATGTTTCAGTGCATTTAATTTCTGTGGCTGGTaGACTGGGCTCCTCTTGATTGAATGCACAGTACCTATCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: ITPMKCFSAFNFCGW*TGLLLIECTVPIIL Trigger: AAGAATGATAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAATGCACTGAAACATTTCATTGGTGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR GCA 90 bp | GTTCACTTGATCATTGGTTTAGAACAGCCTCTTACACATAGTAAGTaGTTTGAAATAAGTAGAGGAGTCAGTGATGGTGGAAGAGCAATG | + |
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Preference number: 1 (lower is better) Translates to: VHLIIGLEQPLTHSK*FEISRGVSDGGRAM Trigger: CATTGCTCTTCCACCATCACTGACTCCTCTACTTATTTCAAAGCACTTACTATGTGTAAGAGGCTGTTCTAAACCAATGATCAAGTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR TCA 90 bp | GTTTCAGTGCATTTAATTTCTGTGGCTGGTGCACTGGGCTCCTCTTaGTTGAATGCACAGTACCTATCATTCTTTCATAGTTCTATAAAA | + |
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Preference number: 1 (lower is better) Translates to: VSVHLISVAGALGSS*LNAQYLSFFHSSIK Trigger: TTTTATAGAACTATGAAAGAATGATAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAATGCACTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CCA 90 bp | AATATAACACCAATGAAATGTTTCAGTGCATTTAATTTCTGTGGCTaGTGCACTGGGCTCCTCTTGATTGAATGCACAGTACCTATCATT | + |
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Preference number: 1 (lower is better) Translates to: NITPMKCFSAFNFCG*CTGLLLIECTVPII Trigger: AATGATAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAATGCACTGAAACATTTCATTGGTGTTATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CCA 90 bp | GAACATCACCTTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTaGTACAAACTCATCCTTCAAGTAAGTATTGACCTAACAAAAATT | + |
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Preference number: 1 (lower is better) Translates to: EHHLRCLPSQICFTI*YKLILQVSIDLTKI Trigger: AATTTTTGTTAGGTCAATACTTACTTGAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAAGGTGATGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CAA 90 bp | GAAACCCCCATCCCATCCTCCCTTTCCCTGCTTCTATTAGGGTGCTaGACCACTTATTCACCCACTCCCAACTCCGTGCCCTGGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: ETPIPSSLSLLLLGC*TTYSPTPNSVPWHS Trigger: GGAATGCCAGGGCACGGAGTTGGGAGTGGGTGAATAAGTGGTCAAGCACCCTAATAGAAGCAGGGAAAGGGAGGATGGGATGGGGGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAAACAGGTGGTGCAGATaGAGAGGGAGGCCATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQANRWCR*RGRPWA Trigger: TGCCCATGGCCTCCCTCTCCATCTGCACCACCTGTT...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCCACTCCCAACTCCGTaGCCTGGCATTCCTCTATAC | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIPLPTP*PGIPLY Trigger: GTATAGAGGAATGCCAGGGCACGGAGTTGGGAGTGG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCTGATGGTGACAGCCTaGACCACGCTGAGGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLILMVTA*TTLRKQ Trigger: CTGTTTCCTCAGCGTGGTCCAGGCTGTCACCATCAG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CAA 90 bp | GGTAGAAGGGTGGTAAGCTGTTGGACAGCTTTGGTGAATAGCCCTTaGCAACCTCTTGGCCCCCAGGGAAGTTCACACACAGCAAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: GRRVVSCWTALVNSP*QPLGPQGSSHTARI Trigger: TATCCTTGCTGTGTGTGAACTTCCCTGGGGGCCAAGAGGTTGCAAAGGGCTATTCACCAAAGCTGTCCAACAGCTTACCACCCTTCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCGCTAAGAGCAAAGGCTaGACTTCAGGGAACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIAKSKG*TSGNPG Trigger: ACCTGGGTTCCCTGAAGTTCAGCCTTTGCTCTTAGC...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCATGGTTGGAGCTTTCTTaGAAGGGTGGTCCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQAWLELS*KGGPGT Trigger: AGTCCCAGGACCACCCTTTCAAGAAAGCTCCAACCA...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCTGGTTGGAGCTTTCTTaGAAGGGTGGTCCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIWLELS*KGGPGT Trigger: AGTCCCAGGACCACCCTTTCAAGAAAGCTCCAACCA...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCGCACTGGGCTCCTCTTaGTTGAATGCACAGTACCTA | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIALGSS*LNAQYL Trigger: TAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGC...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCATTCTCTGCTACAAATaGAGCTGGAGCCATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIILCYK*SWSHGS Trigger: GGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAGGCATTCCTCTATACTaGGGTATCGAGCCTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQAGIPLY*GIEPSQ Trigger: TTGGGAAGGCTCGATACCCCAGTATAGAGGAATGCC...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCAGCTCTGTGCCTGGATaGCAGCATATAGCAATACCC | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLISSVPG*QHIAIP Trigger: GGGTATTGCTATATGCTGCCATCCAGGCACAGAGCT...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCAATCACAGGGCATTTaGGGATCTCTTCCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIQSQGI*GSLPVC Trigger: ACAGACTGGAAGAGATCCCCAAATGCCCTGTGATTG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTAACAGGTGGTGCAGATaGAGAGGGAGGCCATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCNRWCR*RGRPWA Trigger: TGCCCATGGCCTCCCTCTCCATCTGCACCACCTGTT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCATGGAGTGTGTGGTTaGAGCTTTCTTGAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIHGVCG*SFLERV Trigger: CACCCTTTCAAGAAAGCTCCAACCACACACTCCATG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCACATGGAGTGTGTGGTTaGAGCTTTCTTGAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQAHGVCG*SFLERV Trigger: CACCCTTTCAAGAAAGCTCCAACCACACACTCCATG...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCAGGAGAAGCAAGTCATaGAAATGCCATGGAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIRRSKS*KCHGVC Trigger: ACACACTCCATGGCATTTTCATGACTTGCTTCTCCT...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCGGTCACTCTGATATCTaGCCTGGAATTGTTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIGHSDI*PGIVCR Trigger: TCTGCAAACAATTCCAGGTCAGATATCAGAGTGACC...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCCTAAACTGCAACATTaGAATTGTGGGCTGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIPKLQH*NCGLVG Trigger: TCCTACCAGCCCACAATTGCAATGTTGCAGTTTAGG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCGTCATGAAAATGCCATaGAGTGTGTGGTTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIVMKMP*SVWLEL Trigger: AAGCTCCAACCACACACTCCATGGCATTTTCATGAC...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTGCTAAGAGCAAAGGCTaGACTTCAGGGAACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCAKSKG*TSGNPG Trigger: ACCTGGGTTCCCTGAAGTTCAGCCTTTGCTCTTAGC...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCCTCAGTGCAAGGCTTaGATAACCAAGATTATTGTT | + |
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Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIPQCKA*ITKIIV Trigger: AACAATAATCTTGGTTATTCAAGCCTTGCACTGAGG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTGGCTTCTCCTCCCATTaGTGTCCAAATAGGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCGFSSH*CPNRPF Trigger: GAATGGCCTATTTGGACATCAATGGGAGGAGAAGCC...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTGCACTGGGCTCCTCTTaGTTGAATGCACAGTACCTA | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCALGSS*LNAQYL Trigger: TAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGC...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTCTTTACTGCCTGCTGTaGTATAGTGCAGCAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCLYCLL*YSAARW Trigger: CCACCTTGCTGCACTATATCACAGCAGGCAGTAAAG...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTATTCTCTGCTACAAATaGAGCTGGAGCCATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCILCYK*SWSHGS Trigger: GGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAGCTGTTGAGAACACCTaGACATTAATAAAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQAAVENT*TLIKGS Trigger: ACTGCCTTTTATTAATGTCCAGGTGTTCTCAACAGC...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CAA 90 bp | CAACATGGGCTTCAGCAAAGAGCTTCCCTCAATGCTTATAGTTCCTaGCCTCGATGTTTGCTTGTAAATACCATGTGCCTGAACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QHGLQQRASLNAYSS*PRCLLVNTMCLNSS Trigger: ACTGCTGTTCAGGCACATGGTATTTACAAGCAAACATCGAGGCAAGGAACTATAAGCATTGAGGGAAGCTCTTTGCTGAAGCCCATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGGGCTTCTCCTCCCATTaGTGTCCAAATAGGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: THASNMIWLKPVGFLFLGGFSSH*CPNRPF Trigger: GAATGGCCTATTTGGACATCAATGGGAGGAGAAGCC...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAATTGTACAATCCTTTTaGGAAACACACGCAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQAIVQSF*ETHASN Trigger: GTTACTTGCGTGTGTTTCTCAAAAGGATTGTACAAT...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCTCTCCACTTTGTAAGTaGCCTTCAGATAAATTATGC | + |
|
Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLISPLCK*PSDKLC Trigger: GCATAATTTATCTGAAGGTCACTTACAAAGTGGAGA...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTAATTTCTGTGGCTGGTaGACTGGGCTCCTCTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCNFCGW*TGLLLI Trigger: AATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAAGTTTGTCTCATATCTaGAAGCTTTATTCCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLSNTDIADDQDKGLRQASLSHI*KLYSWR Trigger: TCTCCAGGAATAAAGCTTGCAGATATGAGACAAACT...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCTTTCATTGTGTAGGATaGACAAACCTAAACTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIFHCVG*TNLNCN Trigger: GTTGCAGTTTAGGTTTGTGCATCCTACACAATGAAA...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTCTGCTACAAATGCAGCTGGAGCCATGGGTCCTTCCATGTGTTCTCTTTGAGGTGGTTTAGCCCCTaGGATTTCTTGATTATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ILCYKCSWSHGSFHVFSLRWFSP*DFLIIA Trigger: TGCAATAATCAAGAAATCCCAGGGGCTAAACCACCT...CAAAGAGAACACATGGAAGGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTTTTAATTTCTGTGGCTaGTGCACTGGGCTCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCFNFCG*CTGLLL Trigger: CAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAA...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCACCACTCCCAACTCCGTaGCCTGGCATTCCTCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: LLSSLSHICKLYSWRDPSPLPTP*PGIPLY Trigger: GTATAGAGGAATGCCAGGGCACGGAGTTGGGAGTGG...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCGCACTGGGCTCCTCTTaGTTGAATGCACAGTACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFALGSS*LNAQYL Trigger: TAGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGC...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCGGCATTCCTCTATACTaGGGTATCGAGCCTTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFGIPLY*GIEPSQ Trigger: TTGGGAAGGCTCGATACCCCAGTATAGAGGAATGCC...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTCCTCAGTGCAAGGCTTaGATAACCAAGATTATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCPQCKA*ITKIIV Trigger: AACAATAATCTTGGTTATTCAAGCCTTGCACTGAGG...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGGCCCCTGGGATTTCTTaGTTATTGCAATTTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: THASNMIWLKPVGFLFLGAPGIS*LLQFAK Trigger: CTTAGCAAATTGCAATAATCAAGAAATCCCAGGGGC...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGGCTAAGAGCAAAGGCTaGACTTCAGGGAACCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEAKSKG*TSGNPG Trigger: ACCTGGGTTCCCTGAAGTTCAGCCTTTGCTCTTAGC...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAATTCTCTGCTACAAATaGAGCTGGAGCCATGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLSSLSHICKLYSWRDPSILCYK*SWSHGS Trigger: GGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTCCTCAGGCATTCACATaGTACATAGTCATAAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCPQAFT*YIVINA Trigger: TGCATTTATGACTATGTAGCATGTGAATGCCTGAGG...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCAATTTCTGTGGCTGGTaGACTGGGCTCCTCTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFNFCGW*TGLLLI Trigger: AATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCCAATCACAGGGCATTTaGGGATCTCTTCCAGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFQSQGI*GSLPVC Trigger: ACAGACTGGAAGAGATCCCCAAATGCCCTGTGATTG...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTATTGTACAATCCTTTTaGGAAACACACGCAAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: NCLQTWSCEGREHGHDVCIVQSF*ETHASN Trigger: GTTACTTGCGTGTGTTTCTCAAAAGGATTGTACAAT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAAATTTCTGTGGCTGGTaGACTGGGCTCCTCTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: LLSSLSHICKLYSWRDPSNFCGW*TGLLLI Trigger: AATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATT...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCATTTAATTTCTGTGGCTaGTGCACTGGGCTCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSSLSHICKLYSWRDPSFNFCG*CTGLLL Trigger: CAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAA...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGGCTGTTGAGAACACCTaGACATTAATAAAAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: THASNMIWLKPVGFLFLGAVENT*TLIKGS Trigger: ACTGCCTTTTATTAATGTCCAGGTGTTCTCAACAGC...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 90 bp | GGAATTCTACAGCAAAAGACTGGAAAACTCATGGTTTGTATACATTaGGATCCTCTGATTCCTTATGGTCCAGGTATTGTGGAGTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GILQQKTGKLMVCIH*DPLIPYGPGIVESL Trigger: TAAGGACTCCACAATACCTGGACCATAAGGAATCAGAGGATCCAAATGTATACAAACCATGAGTTTTCCAGTCTTTTGCTGTAGAATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCGCCCCTGGGATTTCTTaGTTATTGCAATTTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFAPGIS*LLQFAK Trigger: CTTAGCAAATTGCAATAATCAAGAAATCCCAGGGGC...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGAGTTTGTCTCATATCTaGAAGCTTTATTCCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: THASNMIWLKPVGFLFLGSLSHI*KLYSWR Trigger: TCTCCAGGAATAAAGCTTGCAGATATGAGACAAACT...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCAGGTGGTTTAGCCCCTaGGATTTCTTGATTATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFRWFSP*DFLIIA Trigger: TGCAATAATCAAGAAATCCCAGGGGCTAAACCACCT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGCAATCACAGGGCATTTaGGGATCTCTTCCAGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEQSQGI*GSLPVC Trigger: ACAGACTGGAAGAGATCCCCAAATGCCCTGTGATTG...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCATTAATAAAAGGCAGTaGCTAACAAGCCTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFINKRQ*LTSLSL Trigger: CAGACTGAGGCTTGTTAGCCACTGCCTTTTATTAAT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGTTTCTTTTGTTCTTGTaGCCTTCCCTCACCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEFLLFL*PSLTPF Trigger: AAAAGGGGTGAGGGAAGGTCACAAGAACAAAAGAAA...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCACCTCAGGCATTCACATaGTACATAGTCATAAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLSSLSHICKLYSWRDPSPQAFT*YIVINA Trigger: TGCATTTATGACTATGTAGCATGTGAATGCCTGAGG...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCAGTTTGTCTCATATCTaGAAGCTTTATTCCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LDASLLRFVLLSGTNSSFSLSHI*KLYSWR Trigger: TCTCCAGGAATAAAGCTTGCAGATATGAGACAAACT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGAGGTGGTTTAGCCCCTaGGATTTCTTGATTATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFERWFSP*DFLIIA Trigger: TGCAATAATCAAGAAATCCCAGGGGCTAAACCACCT...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGCCTCAGTGCAAGGCTTaGATAACCAAGATTATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEPQCKA*ITKIIV Trigger: AACAATAATCTTGGTTATTCAAGCCTTGCACTGAGG...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGCCTCAGGCATTCACATaGTACATAGTCATAAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEPQAFT*YIVINA Trigger: TGCATTTATGACTATGTAGCATGTGAATGCCTGAGG...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | CCACTCCCAACTCCGTGCCCTGGCATTCCTCTATACTaGGGTATCGAGCCTTCCCAAGACCAAGGGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPTPCPGIPLY*GIEPSQDQGLL Trigger: GAGAAGCCCTTGGTCTTGGGAAGGCTCGATACCCCAGTATAGAGGAATGCCAGGGCACGGAGTTGGGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCATCAATCACAGGGCATTaGGGGATCTCTTCCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLSNTDIADDQDKGLRQASITGH*GISSSL Trigger: CAGACTGGAAGAGATCCCCAAATGCCCTGTGATTGA...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCATGCACTGGGCTCCTCTaGATTGAATGCACAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: GLSNTDIADDQDKGLRQACTGLL*IECTVP Trigger: AGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCA...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCACTGACCTGGAATTGTTaGCAGACCTGGAGCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLSNTDIADDQDKGLRQALTWNC*QTWSCE Trigger: TTCACAGCTCCAGGTCTGCAAACAATTCCAGGTCAG...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCATATCTGACCTGGAATaGTTTGCAGACCTGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIISDLE*FADLEL Trigger: CAGCTCCAGGTCTGCAAACAATTCCAGGTCAGATAT...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCTCTTCTGCATTTCATaGTGTAGGATGCACAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: PSNAKHLLAGVNWLLSLILFCIS*CRMHKP Trigger: AGGTTTGTGCATCCTACACAATGAAATGCAGAAGAG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTTGCACTGGGCTCCTCTaGATTGAATGCACAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: NCLQTWSCEGREHGHDVCCTGLL*IECTVP Trigger: AGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCA...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR TCA 72 bp | GTTTGGCTCCCCTGTCAGACACTGGGACTCCTTCAGTaGCTGTTGAGATATTTCCATTTCTTCTCAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: VWLPCQTLGLLQ*LLRYFHFFSGR Trigger: TCTACCTGAGAAGAAATGGAAATATCTCAACAGTCACTGAAGGAGTCCCAGTGTCTGACAGGGGAGCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGTCAATCACAGGGCATTaGGGGATCTCTTCCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: THASNMIWLKPVGFLFLGSITGH*GISSSL Trigger: CAGACTGGAAGAGATCCCCAAATGCCCTGTGATTGA...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCGACATGGAGATGATATaGACATTTAGACTTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PSNAKHLLAGVNWLLSLIDMEMI*TFRLEH Trigger: GTGTTCAAGTCTAAATGTCAATATCATCTCCATGTC...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | GAGCCATGGGTCCTTCCATGTGTTCTCTTTGGTAGGTaGTTTAGCCCCTGGGATTTCTTGATTATTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: EPWVLPCVLFGR*FSPWDFLIIAI Trigger: AATTGCAATAATCAAGAAATCCCAGGGGCTAAACCACCTACCAAAGAGAACACATGGAAGGACCCATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | GAGAGAAAGCATCAGTCATTTAGCTCTGTGCCTGGATaGCAGCATATAGCAATACCCAGTAAACATCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ERKHQSFSSVPG*QHIAIPSKHPN Trigger: GTTGGGATGTTTACTGGGTATTGCTATATGCTGCCATCCAGGCACAGAGCTAAATGACTGATGCTTTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | TTCCATTTCTTCTCAGGTAGAAGGGTGGTAAGCTGTTaGACAGCTTTGGTGAATAGCCCTTTGCAACCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FHFFSGRRVVSC*TALVNSPLQPL Trigger: AAGAGGTTGCAAAGGGCTATTCACCAAAGCTGTCCAACAGCTTACCACCCTTCTACCTGAGAAGAAATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCTCAATCACAGGGCATTaGGGGATCTCTTCCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDASLLRFVLLSGTNSSFSITGH*GISSSL Trigger: CAGACTGGAAGAGATCCCCAAATGCCCTGTGATTGA...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTAGTAACATGATATGGTaGAAACCTGTGGGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NCLQTWSCEGREHGHDVCSNMIW*KPVGFL Trigger: CAGAAACCCCACAGGTTTCAACCATATCATGTTACT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR TCA 72 bp | CAGCATATAGCAATACCCAGTAAACATCCCAACTACTaGCCTATGTGCTTTACTGCCTGCTGTGATATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QHIAIPSKHPNY*PMCFTACCDIV Trigger: CACTATATCACAGCAGGCAGTAAAGCACATAGGTCAGTAGTTGGGATGTTTACTGGGTATTGCTATATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR GCA 72 bp | ATGAAATGTTTCAGTGCATTTAATTTCTGTGGCTGGTaGACTGGGCTCCTCTTGATTGAATGCACAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: MKCFSAFNFCGW*TGLLLIECTVP Trigger: AGGTACTGTGCATTCAATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAATGCACTGAAACATTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR GCA 72 bp | AGTTCCTTGCCTCGATGTTTGCTTGTAAATACCATGTaGCTGAACAGCAGTATTGAGGATGAAGCTCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSLPRCLLVNTM*LNSSIEDEALN Trigger: GTTTAGAGCTTCATCCTCAATACTGCTGTTCAGGCACATGGTATTTACAAGCAAACATCGAGGCAAGGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | CCAATGAAATGTTTCAGTGCATTTAATTTCTGTGGCTaGTGCACTGGGCTCCTCTTGATTGAATGCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PMKCFSAFNFCG*CTGLLLIECTV Trigger: TACTGTGCATTCAATCAAGAGGAGCCCAGTGCACCAGCCACAGAAATTAAATGCACTGAAACATTTCATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR GCA 72 bp | ATCTCTTCCAGTCTGTACAGACCTCAGGCATTCACATaGTACATAGTCATAAATGCAGGCAAACTATTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ISSSLYRPQAFT*YIVINAGKLLV Trigger: TACCAATAGTTTGCCTGCATTTATGACTATGTAGCATGTGAATGCCTGAGGTCTGTACAGACTGGAAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | GATAGGTGCCTCTCTGGGAATTCTACAGCAAAAGACTaGAAAACTCATGGTTTGTATACATTTGGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRCLSGNSTAKD*KTHGLYTFGSS Trigger: AGAGGATCCAAATGTATACAAACCATGAGTTTTCCAGTCTTTTGCTGTAGAATTCCCAGAGAGGCACCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGCCTCCCTTCTCAGATTaGTTTTACTATCTGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: THASNMIWLKPVGFLFLGPPFSD*FYYLVQ Trigger: TTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGG...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTCTTCATGCCCAGAAATaGTACAATCCTTTTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NCLQTWSCEGREHGHDVCLHAQK*YNPFEK Trigger: TTTCTCAAAAGGATTGTACAATTTCTGGGCATGAAG...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR TCA 72 bp | TTCTCTTTGGTAGGTGGTTTAGCCCCTGGGATTTCTTaGTTATTGCAATTTGCTAAGATAAACCTCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FSLVGGLAPGIS*LLQFAKINLSA Trigger: TGCACTGAGGTTTATCTTAGCAAATTGCAATAATCAAGAAATCCCAGGGGCTAAACCACCTACCAAAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR TCA 72 bp | ACAGGAAATAAACATTCTGGAATGAAATGTGTCAGGTaGCACACTGACCCCTCATTCTTGTCCATTACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TGNKHSGMKCVR*HTDPSFLSITN Trigger: GTTAGTAATGGACAAGAATGAGGGGTCAGTGTGTCACCTGACACATTTCATTCCAGAATGTTTATTTCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | CATGGTTTGTATACATTTGGATCCTCTGATTCCTTATaGTCCAGGTATTGTGGAGTCCTTAGAACTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: HGLYTFGSSDSL*SRYCGVLRTQY Trigger: GTATTGAGTTCTAAGGACTCCACAATACCTGGACCATAAGGAATCAGAGGATCCAAATGTATACAAACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CCA 72 bp | CTTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTaGTACAAACTCATCCTTCAAGTAAGTATTGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LRCLPSQICFTI*YKLILQVSIDL Trigger: TAGGTCAATACTTACTTGAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGGACATGGAGATGATATaGACATTTAGACTTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEDMEMI*TFRLEH Trigger: GTGTTCAAGTCTAAATGTCAATATCATCTCCATGTC...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR GCA 72 bp | TTCACTGTTTATTTGTTATCTAGTTTGTCTCATATCTaGAAGCTTTATTCCTGGAGAGATCCTTCAGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: FTVYLLSSLSHI*KLYSWRDPSGI Trigger: TATTCCTGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAAATAAACAGTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | ATCCCATCCTCCCTTTCCCTGCTTCTATTAGGGTGCTaGACCACTTATTCACCCACTCCCAACTCCGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSSLSLLLLGC*TTYSPTPNSVP Trigger: GGGCACGGAGTTGGGAGTGGGTGAATAAGTGGTCAAGCACCCTAATAGAAGCAGGGAAAGGGAGGATGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCACCTCCCATAGCACCCTaGAAGACTGCATCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSNTDIADDQDKGLRQAPPIAP*KTASLR Trigger: CCTGAGAGATGCAGTCTTTCAGGGTGCTATGGGAGG...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | GTGGTAAGCTGTTGGACAGCTTTGGTGAATAGCCCTTaGCAACCTCTTGGCCCCCAGGGAAGTTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: VVSCWTALVNSP*QPLGPQGSSHT Trigger: TGTGTGTGAACTTCCCTGGGGGCCAAGAGGTTGCAAAGGGCTATTCACCAAAGCTGTCCAACAGCTTACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | TTCTCAGGTAGAAGGGTGGTAAGCTGTTGGACAGCTTaGGTGAATAGCCCTTTGCAACCTCTTGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSGRRVVSCWTA*VNSPLQPLGPQ Trigger: CTGGGGGCCAAGAGGTTGCAAAGGGCTATTCACCAAAGCTGTCCAACAGCTTACCACCCTTCTACCTGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTGCTACAAATGCAGCTGGAGCCATGGGTCCTTCCATGTGTTCTCTTTGCCTCCCATAGCACCCTaGAAGACTGCATCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILCYKCSWSHGSFHVFSLPPIAP*KTASLR Trigger: CCTGAGAGATGCAGTCTTTCAGGGTGCTATGGGAGG...CAAAGAGAACACATGGAAGGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAAGCACCCTGAAAGACTaGATCTCTCAGGACCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSNTDIADDQDKGLRQASTLKD*ISQDHE Trigger: CTCATGGTCCTGAGAGATGCAGTCTTTCAGGGTGCT...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCTCAATTTCTCCCACTaGACATGCCAACGTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSNAKHLLAGVNWLLSLILNFSH*TCQRST Trigger: GGTTGAACGTTGGCATGTTCAGTGGGAGAAATTGAG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTGCTACAAATGCAGCTGGAGCCATGGGTCCTTCCATGTGTTCTCTTTGAGAAGGAGAACACTCTaGGCAGCTCTCAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILCYKCSWSHGSFHVFSLRRRTL*AALSSG Trigger: TCCTGAGCTGAGAGCTGCCCAGAGTGTTCTCCTTCT...CAAAGAGAACACATGGAAGGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCCTTTGGCAGTCCTTTTaGAAGAAGGATGACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNAKHLLAGVNWLLSLILWQSF*KKDDSV Trigger: AACACTGTCATCCTTCTTGCAAAAGGACTGCCAAAG...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTAGAAGGAGAACACTCTaGGCAGCTCTCAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NCLQTWSCEGREHGHDVCRRRTL*AALSSG Trigger: TCCTGAGCTGAGAGCTGCCCAGAGTGTTCTCCTTCT...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTTAGCAACACAGACATTGCTGATGATCAGGACAAAGGCCTGAGGCAAGCAAGCTACAATAGTCTTTaGCAGTCCTTTTGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSNTDIADDQDKGLRQASYNSL*QSFCKK Trigger: CTTCTTGCAAAAGGACTGCCAAAGACTATTGTAGCT...TGCTTGCCTCAGGCCTTTGTCCTGATCATCAGCAATGTCTGTGTTGCTAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | ACCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATaGGCTTCTCTCCCTGATCATCTCCACTTTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQQCQALTSWSE*ASLPDHLHFVS Trigger: ACTTACAAAGTGGAGATGATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTCTCAATTTCTCCCACTaGACATGCCAACGTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: NCLQTWSCEGREHGHDVCLNFSH*TCQRST Trigger: GGTTGAACGTTGGCATGTTCAGTGGGAGAAATTGAG...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAATGCCAAGCACTTACTAGCTGGAGTGAATTGGCTTCTCTCCCTGATCACAATATTGCAGAACTaGGAGTTTCTTCTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSNAKHLLAGVNWLLSLITILQN*EFLLPC Trigger: ACAAGGAAGAAGAAACTCTCAGTTCTGCAATATTGT...GATCAGGGAGAGAAGCCAATTCACTCCAGCTAGTAAGTGCTTGGCATTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | CCAGGTATTGTGGAGTCCTTAGAACTCAATACTCTCTaGTCTGATAAGGGTGCACAACATGGGCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGIVESLELNTL*SDKGAQHGLQQ Trigger: TTGCTGAAGCCCATGTTGTGCACCCTTATCAGACAAGAGAGTATTGAGTTCTAAGGACTCCACAATACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCACCTCCCATAGCACCCTaGAAGACTGCATCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSPPIAP*KTASLR Trigger: CCTGAGAGATGCAGTCTTTCAGGGTGCTATGGGAGG...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTGCTACAAATGCAGCTGGAGCCATGGGTCCTTCCATGTGTTCTCTTTGTTCTGTAAAGAAGCTTaGAGTTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILCYKCSWSHGSFHVFSLFCKEA*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAAGCTTCTTTACAGAA...CAAAGAGAACACATGGAAGGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTGCTACAAATGCAGCTGGAGCCATGGGTCCTTCCATGTGTTCTCTTTGACAATATTGCAGAACTaGGAGTTTCTTCTTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILCYKCSWSHGSFHVFSLTILQN*EFLLPC Trigger: ACAAGGAAGAAGAAACTCTCAGTTCTGCAATATTGT...CAAAGAGAACACATGGAAGGACCCATGGCTCCAGCTGCATTTGTAGCAGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGGTGCCATGCAGACTTTaGCCTGAGCATCCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEVPCRL*PEHPPS Trigger: GGATGGAGGATGCTCAGGCCAAAGTCTGCATGGCAC...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAAGAAGGAGAACACTCTaGGCAGCTCTCAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSRRRTL*AALSSG Trigger: TCCTGAGCTGAGAGCTGCCCAGAGTGTTCTCCTTCT...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | ACAGAAGACGGAAGCAGATGTTTTGGTACACTGTACTaGAGATATTTACACACCCCTGGACTTAGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEDGSRCFGTLY*RYLHTPGLRTV Trigger: AACAGTCCTAAGTCCAGGGGTGTGTAAATATCTCAAGTACAGTGTACCAAAACATCTGCTTCCGTCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| 3UTR CAA 72 bp | GCTTCCCTCAATGCTTATAGTTCCTTGCCTCGATGTTaGCTTGTAAATACCATGTGCCTGAACAGCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ASLNAYSSLPRC*LVNTMCLNSSI Trigger: AATACTGCTGTTCAGGCACATGGTATTTACAAGCAAACATCGAGGCAAGGAACTATAAGCATTGAGGGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGGGCTTCCCCAACAACTaGACATGTAATTCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: THASNMIWLKPVGFLFLGGFPNN*TCNSQK Trigger: TTTCTGTGAATTACATGTTCAGTTGTTGGGGAAGCC...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCACATCTCTCAGGACCATaGGAGGGAGAACAATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSHLSGP*EGEQSL Trigger: AAGGGATTGTTCTCCCTCTCATGGTCCTGAGAGATG...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR TCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCCTCAATTTCTCCCACTaGACATGCCAACGTTCAACC | + |
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Preference number: 4 (lower is better) Translates to: LDASLLRFVLLSGTNSSFLNFSH*TCQRST Trigger: GGTTGAACGTTGGCATGTTCAGTGGGAGAAATTGAG...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR GCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGCTTTGGCAGTCCTTTTaGAAGAAGGATGACAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: THASNMIWLKPVGFLFLGLWQSF*KKDDSV Trigger: AACACTGTCATCCTTCTTGCAAAAGGACTGCCAAAG...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR CCA 90 bp | AATTGTTTGCAGACCTGGAGCTGTGAAGGTAGAGAACACGGACATGATGTTTGTTTCTGTAAAGAAGCTTaGAGTTCTGAAGGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NCLQTWSCEGREHGHDVCFCKEA*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAAGCTTCTTTACAGAA...ACAAACATCATGTCCGTGTTCTCTACCTTCACAGCTCCAGGTCTGCAAACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR GCA 90 bp | ACACACGCAAGTAACATGATATGGTTGAAACCTGTGGGGTTTCTGTTTTTAGGGCTGAACAGCACATTTTaGATGAGAGCATTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: THASNMIWLKPVGFLFLGLNSTF*MRAFSG Trigger: ACCAGAAAATGCTCTCATGCAAAATGTGCTGTTCAG...CCCTAAAAACAGAAACCCCACAGGTTTCAACCATATCATGTTACTTGCGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000227685.2 |
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| 3UTR CAA 72 bp | CAGCAAAAGACTGGAAAACTCATGGTTTGTATACATTaGGATCCTCTGATTCCTTATGGTCCAGGTATTGTG | + |
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Preference number: 4 (lower is better) Translates to: QQKTGKLMVCIH*DPLIPYGPGIV Trigger: CACAATACCTGGACCATAAGGAATCAGAGGATCCAAATGTATACAAACCATGAGTTTTCCAGTCTTTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR TCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAACAGCACATTTTGCATaGGAGCATTTTCTGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSTAHFA*EHFLVF Trigger: GAACACCAGAAAATGCTCTCATGCAAAATGTGCTGT...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227685.2 |
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| CDS-3UTR TCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAGGCTTCCCCAACAACTaGACATGTAATTCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSGFPNN*TCNSQK Trigger: TTTCTGTGAATTACATGTTCAGTTGTTGGGGAAGCC...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGCATGAGAGCATTTTCTaGTGTTCAAGAGGCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEHESIF*CSRGSG Trigger: ACCACTGCCTCTTGAACACCAGAAAATGCTCTCATG...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227685.2 |
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| CDS-3UTR CCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCAGCTACAATAGTCTTTaGCAGTCCTTTTGCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LDASLLRFVLLSGTNSSFSYNSL*QSFCKK Trigger: CTTCTTGCAAAAGGACTGCCAAAGACTATTGTAGCT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGGGCTTCCCCAACAACTaGACATGTAATTCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IQVTLNHLHAQKLYNPFEGFPNN*TCNSQK Trigger: TTTCTGTGAATTACATGTTCAGTTGTTGGGGAAGCC...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR TCA 90 bp | TTAGATGCCTCCCTTCTCAGATTTGTTTTACTATCTGGTACAAACTCATCCTTCACAATATTGCAGAACTaGGAGTTTCTTCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDASLLRFVLLSGTNSSFTILQN*EFLLPC Trigger: ACAAGGAAGAAGAAACTCTCAGTTCTGCAATATTGT...GAAGGATGAGTTTGTACCAGATAGTAAAACAAATCTGAGAAGGGAGGCATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTCACTTTAAATCATCTTCATGCCCAGAAATTGTACAATCCTTTTGAGCTTTGGCAGTCCTTTTaGAAGAAGGATGACAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IQVTLNHLHAQKLYNPFELWQSF*KKDDSV Trigger: AACACTGTCATCCTTCTTGCAAAAGGACTGCCAAAG...CTCAAAAGGATTGTACAATTTCTGGGCATGAAGATGATTTAAAGTGACCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR CCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCAAGCTACAATAGTCTTTaGCAGTCCTTTTGCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSSYNSL*QSFCKK Trigger: CTTCTTGCAAAAGGACTGCCAAAGACTATTGTAGCT...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS-3UTR CCA 90 bp | TTGTTATCTAGTTTGTCTCATATCTGCAAGCTTTATTCCTGGAGAGATCCTTCATTCTGTAAAGAAGCTTaGAGTTCTGAAGGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLSSLSHICKLYSWRDPSFCKEA*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAAGCTTCTTTACAGAA...TGAAGGATCTCTCCAGGAATAAAGCTTGCAGATATGAGACAAACTAGATAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| 3UTR CAA 72 bp | CTAATTTCAAGTGACTTGATACTCTTCTGCATTTCATaGTGTAGGATGCACAAACCTAAACTGCAACATTGC | + |
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Preference number: 4 (lower is better) Translates to: LISSDLILFCIS*CRMHKPKLQHC Trigger: GCAATGTTGCAGTTTAGGTTTGTGCATCCTACACAATGAAATGCAGAAGAGTATCAAGTCACTTGAAATTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS CCA 90 bp | CACTCTGGGCAGCTCTCAGCTCAGGAGGAGTTCTGTAAAGAAGCTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGGTGCTTATAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSGQLSAQEEFCKEA*SSEGRGHAGGAYRE Trigger: TTCTCTATAAGCACCACCAGCATGTCCTCTACCTTCAGAACTCCAAGCTTCTTTACAGAACTCCTCCTGAGCTGAGAGCTGCCCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS GCA 90 bp | ATTAATGCACTGAATAACCAAAAGAATAAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGCATCCTCCATCCAGATGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: INALNNQKNKKNGRM*HADFGLSILHPDAL Trigger: CAGAGCATCTGGATGGAGGATGCTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTTATTCTTTTGGTTATTCAGTGCATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS GCA 72 bp | CCCATCCCTGTGAATCAGCACCAGGGGACTAAACGTTaGATAACCAAGGGTCAGAAGTTCTCGAGGATTTAC | + |
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Preference number: 6 (lower is better) Translates to: PIPVNQHQGTKR*ITKGQKFSRIY Trigger: GTAAATCCTCGAGAACTTCTGACCCTTGGTTATGCAACGTTTAGTCCCCTGGTGCTGATTCACAGGGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS TCA 72 bp | GGTGTACGGGTTTCTTCTCAGGGCTTCCCCAACAACTaGACATGTAATTCACAGAAACAGACATGTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GVRVSSQGFPNN*TCNSQKQTCFP Trigger: TGGGAAACATGTCTGTTTCTGTGAATTACATGTTCAGTTGTTGGGGAAGCCCTGAGAAGAAACCCGTACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS GCA 72 bp | CTGAATAACCAAAAGAATAAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGCATCCTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LNNQKNKKNGRM*HADFGLSILHP Trigger: TGGATGGAGGATGCTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTTATTCTTTTGGTTATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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| CDS CAA 90 bp | AAAGAAAGAATCAGTAATGCTGGACATGGATCTGAACAGCACATTTaGCATGAGAGCATTTTCTGGTGTTCAAGAGGCAGTGGTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: KERISNAGHGSEQHI*HESIFWCSRGSGGC Trigger: GCATCCACCACTGCCTCTTGAACACCAGAAAATGCTCTCATGCAAAATGTGCTGTTCAGATCCATGTCCAGCATTACTGATTCTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 |
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| CDS CAA 72 bp | GAAGTTCTCGAGGATTTACCATTAAGGTGTTGTCCTTaGAGGAGAGACTTAAAATTAGGGAAAAGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: EVLEDLPLRCCP*RRDLKLGKRHN Trigger: ATTGTGCCTTTTCCCTAATTTTAAGTCTCTCCTCAAAGGACAACACCTTAATGGTAAATCCTCGAGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000091732.4 ENSMUST00000227685.2 ENSMUST00000227689.2 ENSMUST00000227846.2 |
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