Pregenerated sensors for VMN1R197 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069294Ensembl transcript IDs: ENSMUST00000091734.2, ENSMUST00000226225.2, ENSMUST00000227017.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTCTGCCCTGCTTCCCTACCCACCCACTCCCGCTTCTTGGCCCTaGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAATACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSALLPYPPTPASWP*HSLVLGHIKFAIPR Trigger: CCTTGGTATTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CCA 90 bp | TACCCTCCTTCTGCCCTGCTTCCCTACCCACCCACTCCCGCTTCTTaGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAATA | + |
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Preference number: 1 (lower is better) Translates to: YPPSALLPYPPTPAS*PWHSLVLGHIKFAI Trigger: TATTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAAGGAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CCA 90 bp | ACTGATTTCCAGAATGGTTGTACCAACTTGCAATACCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TDFQNGCTNLQYHQQ*RSVPLSPHPCQHLL Trigger: CAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGTTGGTACAACCATTCTGGAAATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR GCA 90 bp | TGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATCTTCTGCTAGTACTATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: WSMCPYYQLEHLLGI*PGEVLLDLLLVLCP Trigger: TGGGCATAGTACTAGCAGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR TCA 90 bp | GGAGAGGTATTGCTGGATCTTCTGCTAGTACTATGCCCAATTTTCTaGGGAACCACCAGACTGATTTCCAGAATGGTTGTACCAACTTGC | + |
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Preference number: 1 (lower is better) Translates to: GEVLLDLLLVLCPIF*GTTRLISRMVVPTC Trigger: GCAAGTTGGTACAACCATTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGGCATAGTACTAGCAGAAGATCCAGCAATACCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR TCA 90 bp | GCCATTTTTGATGCTTGTTGTGATTCCATCTGCTACCTGAACTGGTaGTCATGGATGACCTTTATAGACACAAGAGACTATCAGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: AIFDACCDSICYLNW*SWMTFIDTRDYQHA Trigger: GGCATGCTGATAGTCTCTTGTGTCTATAAAGGTCATCCATGATCACCAGTTCAGGTAGCAGATGGAATCACAACAAGCATCAAAAATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR GCA 90 bp | CTTGGGTATTCTAGGTTTCTGGGCAAATATCCACTTATCAGTGAGTaGATATCAAGTGACATCTTTTGTGATTGGGTTACCTCACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LGYSRFLGKYPLISE*ISSDIFCDWVTSLR Trigger: CCTGAGTGAGGTAACCCAATCACAAAAGATGTCACTTGATATGCACTCACTGATAAGTGGATATTTGCCCAGAAACCTAGAATACCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CCA 90 bp | TATATCAGGCTAAAGTCTTTGGGGAACTCGAAATGTATTATTAACTaGGCCATGAGGCCAAGCCAAAGTTCCTGTCTCATACATGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: YIRLKSLGNSKCIIN*AMRPSQSSCLIHVK Trigger: CTTTACATGTATGAGACAGGAACTTTGGCTTGGCCTCATGGCCCAGTTAATAATACATTTCGAGTTCCCCAAAGACTTTAGCCTGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR TCA 90 bp | ATGAGGCCAAGCCAAAGTTCCTGTCTCATACATGTAAAGATATTTTaGCAAATTGGATCAGTGTGTGTATGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: MRPSQSSCLIHVKIF*QIGSVCVCVCVCVC Trigger: ACACACACACACACACACACATACACACACTGATCCAATTTGTCAAAATATCTTTACATGTATGAGACAGGAACTTTGGCTTGGCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR GCA 90 bp | ATTTGCATTTTCCTGATGATTAAGGATGTTGAACATTTTTGCAAGTaGTTCTCAGCCCTTTGGTATTCCTCAGTTGAGAATTCTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: ICIFLMIKDVEHFCK*FSALWYSSVENSLF Trigger: AAACAAAGAATTCTCAACTGAGGAATACCAAAGGGCTGAGAAGCACTTGCAAAAATGTTCAACATCCTTAATCATCAGGAAAATGCAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATTTATTAACTGGGCCATaGGGCCAAGCCAAAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHLLTGP*GQAKVP Trigger: AGGAACTTTGGCTTGGCCTCATGGCCCAGTTAATAA...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATCTGTGGGCTAGCCTGTaGGGCATCTTTCTTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHLWASL*GIFLFL Trigger: AAGAAAAAGAAAGATGCCTCACAGGCTAGCCCACAG...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATCCTAGCCATTCTGACTaGAGTGAGGTGGAATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHPSHSD*SEVESQ Trigger: TTGAGATTCCACCTCACTCCAGTCAGAATGGCTAGG...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 90 bp | GTACCCTCCTTCTGCCCTGCTTCCCTACCCACCCACTCCCGCTTCTaGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VPSFCPASLPTHSRF*ALAFPCTGAYKVCN Trigger: ATTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAAGGAGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATGTGCCAGAATCTTTCTaGATAATGGTTGGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHVPESF*IMVGVR Trigger: TCTCACACCAACCATTATTCAGAAAGATTCTGGCAC...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATAAGAGACTATCAGCATaGCATCACTGGATGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHKRLSA*HHWMSR Trigger: TCTTGACATCCAGTGATGGCATGCTGATAGTCTCTT...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATTTCCCAATCTGTTGCTaGCCTTTTTGTCTTATTGAC | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHFPICC*PFCLID Trigger: GTCAATAAGACAAAAAGGCCAGCAACAGATTGGGAA...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGAGTTCTCTTTCATaGTCTCTGCCTCAGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: YPPTPASWPWHSLVLGHIKSSLS*SLPQFL Trigger: CAGGAACTGAGGCAGAGACCATGAAAGAGAACTCTT...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAGACCCCTTCAGCTCTTaGGTACTTTCTTTAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: YPPTPASWPWHSLVLGHIDPFSS*VLSLDP Trigger: TGGATCTAAAGAAAGTACCCAAGAGCTGAAGGGGTC...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATAATTTTCAGTGTCTCTaGTTTTATGTGGAGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHNFQCL*FYVEFL Trigger: AAGGAACTCCACATAAAACCAGAGACACTGAAAATT...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATGCTCTTTGTATATATTaGATATTAGTCCCCTATCTG | + |
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Preference number: 2 (lower is better) Translates to: PYPPTPASWPWHSLVLGHALCIY*ILVPYL Trigger: CAGATAGGGGACTAATATCCAATATATACAAAGAGC...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 90 bp | CCTGTGTTCCATCCTATAGATGACTGTGAGCATCCACTCCTGTATTaGCCAAGCACTGGAAAAGCCTCACAGGAGACAGCTATATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PVFHPIDDCEHPLLY*PSTGKASQETAISG Trigger: CCCTGATATAGCTGTCTCCTGTGAGGCTTTTCCAGTGCTTGGCAAATACAGGAGTGGATGCTCACAGTCATCTATAGGATGGAACACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTGGGCAAAGAGACAGTTaGGGCTTTGAACTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPGQRDS*GFELSC Trigger: ACAGGAAAGTTCAAAGCCTCAACTGTCTCTTTGCCC...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTTGCTCAGAAAACACTTaGGGTTTAAGCCAACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPCSENT*GLSQQP Trigger: GGGCTGTTGGCTTAAACCTCAAGTGTTTTCTGAGCA...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTCCTAGCCATTCTGACTaGAGTGAGGTGGAATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPPSHSD*SEVESQ Trigger: TTGAGATTCCACCTCACTCCAGTCAGAATGGCTAGG...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAGAAATATACACGCATTaGTCTTCCTTCTTGATTTTC | + |
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Preference number: 2 (lower is better) Translates to: YPPTPASWPWHSLVLGHIEIYTH*SSFLIF Trigger: GAAAATCAAGAAGGAAGACCAATGCGTGTATATTTC...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTATTGTAACTGGGAGCTaGAATAAGCCTTCCACGTTT | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPIVTGS*NKPSTF Trigger: AAACGTGGAAGGCTTATTTCAGCTCCCAGTTACAAT...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTGCCCTACAGAAGCTTTaGAATTTTATGAGGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPALQKL*NFMRSH Trigger: ATGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGC...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 90 bp | TTTCTGAGGAACCACCAGACTGATTTCCAGAATGGTTGTACCAACTaGCAATACCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: FLRNHQTDFQNGCTN*QYHQQWRSVPLSPH Trigger: ATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGTTGGTACAACCATTCTGGAAATCAGTCTGGTGGTTCCTCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTGGGCAAAGAGACAGTTaGGGCTTTGAACTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVGQRDS*GFELSC Trigger: ACAGGAAAGTTCAAAGCCTCAACTGTCTCTTTGCCC...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTCTGATATACACAGTTTaGGAAGTAAATGCAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPLIYTV*EVNAEG Trigger: TCCTTCTGCATTTACTTCTCAAACTGTGTATATCAG...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTTTATTAACTGGGCCATaGGGCCAAGCCAAAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GSILILLHDNRPLCQNLSLLTGP*GQAKVP Trigger: AGGAACTTTGGCTTGGCCTCATGGCCCAGTTAATAA...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTTCTAGGTTCTTGCCTTaGGTTCCTGTCCTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSILILLHDNRPLCQNLSSRFLP*VPVLSS Trigger: AGAACTCAGGACAGGAACTCAAGGCAAGAACCTAGA...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTTCTTTCCCAATCTGTTaGTGGCCTTTTTGTCTTATT | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPSFPIC*WPFCLI Trigger: AATAAGACAAAAAGGCCAGCAACAGATTGGGAAAGA...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTGGTATTCTAGGTTTCTaGGCAAATATCCACTTATCA | + |
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Preference number: 2 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPGILGF*ANIHLS Trigger: TGATAAGTGGATATTTGCCCAGAAACCTAGAATACC...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATTCTAGGTTCTTGCCTTaGGTTCCTGTCCTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: AGLFVLLTVSFALQKLCNSRFLP*VPVLSS Trigger: AGAACTCAGGACAGGAACTCAAGGCAAGAACCTAGA...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATAGACAGTTGAGGCTTTaGACTTTCCTGTGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: AGLFVLLTVSFALQKLCNRQLRL*TFLCLI Trigger: AATGAGGCACAGGAAAGTTCAAAGCCTCAACTGTCT...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTAGACAGTTGAGGCTTTaGACTTTCCTGTGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: CVCVLVVQWVVLVSVLITRQLRL*TFLCLI Trigger: AATGAGGCACAGGAAAGTTCAAAGCCTCAACTGTCT...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTAAATCCAGACCCACATaGTTGCTCAGAAAACACTTG | + |
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Preference number: 2 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVKSRPT*LLRKHL Trigger: CAAGTGTTTTCTGAGCAAGCATGTGGGTCTGGATTT...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGTGCTTCTCAGCCCTTTaGTATTCCTCAGTTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: FQLLAIINRAAMYIVEHVCFSAL*YSSVEN Trigger: ATTCTCAACTGAGGAATACCAAAGGGCTGAGAAGCA...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 90 bp | GTATCTTTTGCCCTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTCGATCTTACAGCACAGGCCATTGCTGTTCTGTTTAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: VSFALQKLCNFMRSH*SILQHRPLLFCLGI Trigger: AATTCCTAAACAGAACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGCAAAAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTTTAGGTTCTCTCAAATaGGGTAAGTACACTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVLGSLK*GKYTFH Trigger: GTGGAAAGTGTACTTACCTCATTTGAGAGAACCTAA...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTTTAGGTTCTCTCAAATaGGGTAAGTACACTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GSILILLHDNRPLCQNLSLGSLK*GKYTFH Trigger: GTGGAAAGTGTACTTACCTCATTTGAGAGAACCTAA...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGAGTTTGAGAAGTAAATaGAGAAGGAGCATTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FQLLAIINRAAMYIVEHVSLRSK*RRSIVA Trigger: AGCCACAATGCTCCTTCTGCATTTACTTCTCAAACT...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTCTTTCTCCACATCCTTaGCAGCATCTGCTGTCACCT | + |
|
Preference number: 2 (lower is better) Translates to: VLTPNFVSKTPSMDILFPLSPHP*QHLLSP Trigger: AGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAG...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTAAATGTATTATTAACTaGGCCATGAGGCCAAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GSILILLHDNRPLCQNLSKCIIN*AMRPSQ Trigger: TTGGCTTGGCCTCATGGCCCAGTTAATAATACATTT...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 90 bp | GGGAGGAATGAAATATACACGCATTGGTCTTCCTTCTTGATTTTCTaGTGTTTTGGAAGTTGTATCTTGGGTATTCTAGGTTTCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GRNEIYTHWSSFLIF*CFGSCILGILGFWA Trigger: TGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAATGCGTGTATATTTCATTCCTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTGAGAAAAATGTGAGGTaGATCTCTGTATCTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GSILILLHDNRPLCQNLSEKNVR*ISVSVF Trigger: AAAGACAGATACAGAGATTCACCTCACATTTTTCTC...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTGAATTAATAATCCAATaGGCACCAGGAGGAAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVELIIQ*APGGNY Trigger: ATAGTTTCCTCCTGGTGCCCATTGGATTATTAATTC...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTGCCTCTAACATGTATTaGTGGTTTTTGCCATTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CVCVLVVQWVVLVSVLITASNMY*WFLPFL Trigger: CAAAAATGGCAAAAACCATCAATACATGTTAGAGGC...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATCTGATATACACAGTTTaGGAAGTAAATGCAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGLFVLLTVSFALQKLCNLIYTV*EVNAEG Trigger: TCCTTCTGCATTTACTTCTCAAACTGTGTATATCAG...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGGCATGTGAAAGTTTTTaGTGTATGTCTGATATACAC | + |
|
Preference number: 2 (lower is better) Translates to: FQLLAIINRAAMYIVEHVACESF*CMSDIH Trigger: GTGTATATCAGACATACAGCAAAAACTTTCACATGC...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATGAATTAATAATCCAATaGGCACCAGGAGGAAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: AGLFVLLTVSFALQKLCNELIIQ*APGGNY Trigger: ATAGTTTCCTCCTGGTGCCCATTGGATTATTAATTC...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 90 bp | TTCTCCTCTACAATTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTaGATCCACTTAGACTTGAGATTTGTACAAGGAGATAAGAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSTIFSVSGFMWSS*IHLDLRFVQGDKNG Trigger: TCCATTCTTATCTCCTTGTACAAATCTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACACTGAAAATTGTAGAGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 90 bp | CATTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGAAGTTGTATCTaGGGTATTCTAGGTTTCTGGGCAAATATCCACTTATCAGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: HWSSFLIFLCFGSCI*GILGFWANIHLSVS Trigger: ACTCACTGATAAGTGGATATTTGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 90 bp | ATACACGCATTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGAAGTaGTATCTTGGGTATTCTAGGTTTCTGGGCAAATATCCACTTATC | + |
|
Preference number: 2 (lower is better) Translates to: IHALVFLLDFLVFWK*YLGYSRFLGKYPLI Trigger: GATAAGTGGATATTTGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAATGCGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTATTGTAACTGGGAGCTaGAATAAGCCTTCCACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VLTPNFVSKTPSMDILFPIVTGS*NKPSTF Trigger: AAACGTGGAAGGCTTATTTCAGCTCCCAGTTACAAT...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATGCATGTGAAAGTTTTTaGTGTATGTCTGATATACAC | + |
|
Preference number: 2 (lower is better) Translates to: AGLFVLLTVSFALQKLCNACESF*CMSDIH Trigger: GTGTATATCAGACATACAGCAAAAACTTTCACATGC...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTAGCACTGTCACCATTTaGTGCATAAATACACACCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLTPNFVSKTPSMDILFPSTVTI*CINTHL Trigger: AAGGTGTGTATTTATGCATCAAATGGTGACAGTGCT...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTGAAATATACACGCATTaGTCTTCCTTCTTGATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VLTPNFVSKTPSMDILFPEIYTH*SSFLIF Trigger: GAAAATCAAGAAGGAAGACCAATGCGTGTATATTTC...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR GCA 72 bp | GCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTaGTTCCCTACCCACCCACTCCCGCTTCTTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AIPKVPCTLLLP*FPTHPLPLLGP Trigger: AGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | TCTGCCCTGCTTCCCTACCCACCCACTCCCGCTTCTTaGCCCTGGCATTCCCTTGTACTGGGGCATATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SALLPYPPTPAS*PWHSLVLGHIK Trigger: CTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR GCA 72 bp | CAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTaGCCTGCTTCCCTACCCACCCACTCCCGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QMLSRKFPVPSF*PASLPTHSRFL Trigger: CAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | CTGCTTCCCTACCCACCCACTCCCGCTTCTTGGCCCTaGCATTCCCTTGTACTGGGGCATATAAAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPYPPTPASWP*HSLVLGHIKFA Trigger: TGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATCTGGAGTTCAGCTTCTaGAGCTCTTTGTATATATTG | + |
|
Preference number: 3 (lower is better) Translates to: PYPPTPASWPWHSLVLGHLEFSF*SSLYIL Trigger: CAATATATACAAAGAGCTCAAGAAGCTGAACTCCAG...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTACTCACTCCCACTTCTaGTCCCTGGCGTTCCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPTHSHF*SLAFPC Trigger: ACAGGGGAACGCCAGGGACAAGAAGTGGGAGTGAGT...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATATGCCCTACAGAAGCTTaGCAATTTTATGAGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YPPTPASWPWHSLVLGHICPTEA*QFYEVP Trigger: TGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGCA...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATCATTGGTCTTCCTTCTaGATTTTCTTGTGTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PYPPTPASWPWHSLVLGHHWSSF*IFLCFG Trigger: TCCAAAACACAAGAAAATCAAGAAGGAAGACCAATG...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | GTCTCTGCCTCAGTTCCTGCCTCTAGGTTCTTGCCTTaGGTTCCTGTCCTGAGTTCTCAGGCTGATGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: VSASVPASRFLP*VPVLSSQADEL Trigger: CAATTCATCAGCCTGAGAACTCAGGACAGGAACTCAAGGCAAGAACCTAGAGGCAGGAACTGAGGCAGAGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTTCCAGACCCACATGCTaGCTCAGAAAACACTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPSRPTC*LRKHLR Trigger: CCTCAAGTGTTTTCTGAGCAAGCATGTGGGTCTGGA...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATATTCTTTCCCAATCTGTaGCTGGCCTTTTTGTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: YPPTPASWPWHSLVLGHIFFPNL*LAFLSY Trigger: ATAAGACAAAAAGGCCAGCAACAGATTGGGAAAGAA...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTCATCCACTCCTGTATTaGCCAAGCACTGGAAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPHPLLY*PSTGKA Trigger: GGCTTTTCCAGTGCTTGGCAAATACAGGAGTGGATG...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | TTCCTGCCTCTAGGTTCTTGCCTTGAGTTCCTGTCCTaGGTTCTCAGGCTGATGAATTGTAACTGGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLPLGSCLEFLS*VLRLMNCNWEL Trigger: CAGCTCCCAGTTACAATTCATCAGCCTGAGAACTCAGGACAGGAACTCAAGGCAAGAACCTAGAGGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | TCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTaGCTTTTTGATCCTAGCCATTCTGACTGGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFSTSLPASAVT*LFDPSHSDWSE Trigger: CTCACTCCAGTCAGAATGGCTAGGATCAAAAAGTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | CAGAATGGTTGTACCAACTTGCAATACCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QNGCTNLQYHQQ*RSVPLSPHPCQ Trigger: CTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGTTGGTACAACCATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTTTGCTCAGAAAACACTaGAGGTTTAAGCCAACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPLLRKH*RFKPTA Trigger: GGCTGTTGGCTTAAACCTCAAGTGTTTTCTGAGCAA...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTAATGGTTGTACCAACTaGCAATACCACCAGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPNGCTN*QYHQQW Trigger: CCATTGCTGGTGGTATTGCAAGTTGGTACAACCATT...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTCTGGGGGTGTCTGATTaGTTCATATTGTTGTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPLGVSD*FILLFH Trigger: GTGGAACAACAATATGAACAAATCAGACACCCCCAG...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | CTTCTGGCATATGCAATAGTGTCTGCATTTGGTAGCTaGTTATGGGATGGACTCCCAGGTGAGGCAGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLAYAIVSAFGS*LWDGLPGEAVF Trigger: AAAGACTGCCTCACCTGGGAGTCCATCCCATAATCAGCTACCAAATGCAGACACTATTGCATATGCCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | GGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTaGGTATATGCCCAGGAGAGGTATTGCTGGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GACVLITSWNIF*VYAQERYCWIF Trigger: GAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGTCCAGACCCACATGCTaGCTCAGAAAACACTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FQLLAIINRAAMYIVEHVSRPTC*LRKHLR Trigger: CCTCAAGTGTTTTCTGAGCAAGCATGTGGGTCTGGA...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTGGCCTTTTTGTCTTATaGACAGTATCTTTTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPGLFVL*TVSFAL Trigger: TAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCC...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | GCCATCACTGGATGTCAAGATGGGCAAAGAGACAGTTaGGGCTTTGAACTTTCCTGTGCCTCATTATTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AITGCQDGQRDS*GFELSCASLLA Trigger: AGCTAATAATGAGGCACAGGAAAGTTCAAAGCCTCAACTGTCTCTTTGCCCATCTTGACATCCAGTGATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR GCA 72 bp | ATGGATGACCTTTATAGACACAAGAGACTATCAGCATaGCATCACTGGATGTCAAGATGGGCAAAGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: MDDLYRHKRLSA*HHWMSRWAKRQ Trigger: CTGTCTCTTTGCCCATCTTGACATCCAGTGATGGCATGCTGATAGTCTCTTGTGTCTATAAAGGTCATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR GCA 72 bp | TGTCCTTATTACCAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATCTTCTGCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPYYQLEHLLGI*PGEVLLDLLLV Trigger: TACTAGCAGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTAATGCAGAAGGAGCATaGTGGCTAAGCTCAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GSILILLHDNRPLCQNLSNAEGA*WLSSTV Trigger: TACTGTTGAGCTTAGCCACAATGCTCCTTCTGCATT...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTAATGCAGAAGGAGCATaGTGGCTAAGCTCAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVNAEGA*WLSSTV Trigger: TACTGTTGAGCTTAGCCACAATGCTCCTTCTGCATT...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGTTGCTCAGAAAACACTaGAGGTTTAAGCCAACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FQLLAIINRAAMYIVEHVLLRKH*RFKPTA Trigger: GGCTGTTGGCTTAAACCTCAAGTGTTTTCTGAGCAA...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | CAGTATCTTTTGCCCTACAGAAGCTTTGCAATTTTATaGGGTCCCATTTGTCGATCTTACAGCACAGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QYLLPYRSFAIL*GPICRSYSTGH Trigger: ATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGCAAAAGATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | TTGCTGGATCTTCTGCTAGTACTATGCCCAATTTTCTaGGGAACCACCAGACTGATTTCCAGAATGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLDLLLVLCPIF*GTTRLISRMVV Trigger: TACAACCATTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGGCATAGTACTAGCAGAAGATCCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | GTAAATGTATCCCATTTTCCGTATCCATTCCTCTGTTaGGGGACATCTGGGTTATTTCCAGCTTCTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VNVSHFPYPFLC*GTSGLFPASGY Trigger: ATAGCCAGAAGCTGGAAATAACCCAGATGTCCCTCAACAGAGGAATGGATACGGAAAATGGGATACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | CTAAAGTCTTTGGGGAACTCGAAATGTATTATTAACTaGGCCATGAGGCCAAGCCAAAGTTCCTGTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LKSLGNSKCIIN*AMRPSQSSCLI Trigger: TATGAGACAGGAACTTTGGCTTGGCCTCATGGCCCAGTTAATAATACATTTCGAGTTCCCCAAAGACTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | TATGTACATAGTGGAGCATGTGTCCTTATTACCAGTTaGAACATCTTCTGGGTATATGCCCAGGAGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YVHSGACVLITS*NIFWVYAQERY Trigger: ATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCACTATGTACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGTATTATCAGTATTGAACACTCTTAATATGCCTGATGGCCATCTGCATGAGACAGTTGAGGCTTaGAACTTTCCTGTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRVLSVLNTLNMPDGHLHETVEA*NFPVPH Trigger: ATGAGGCACAGGAAAGTTCAAAGCCTCAACTGTCTC...ATGCAGATGGCCATCAGGCATATTAAGAGTGTTCAATACTGATAATACTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTACTTGTAGTCCAGTaGGTGGTGTTAGTATCTGTTTTAATCACTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVLVVQ*VVLVSVLITTS Trigger: TGAAGTAGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACACACACACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTGAGACAGTTGAGGCTTaGAACTTTCCTGTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLTPNFVSKTPSMDILFPETVEA*NFPVPH Trigger: ATGAGGCACAGGAAAGTTCAAAGCCTCAACTGTCTC...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | GTGACATCTTTTGTGATTGGGTTACCTCACTCAGGATaGCATCCTTCAAATACATCCATTTGCCCAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: VTSFVIGLPHSG*HPSNTSICPRI Trigger: AATTCTTGGGCAAATGGATGTATTTGAAGGATGTCATCCTGAGTGAGGTAACCCAATCACAAAAGATGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR GCA 72 bp | TCTAGGTTTCTGGGCAAATATCCACTTATCAGTGAGTaGATATCAAGTGACATCTTTTGTGATTGGGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: SRFLGKYPLISE*ISSDIFCDWVT Trigger: GGTAACCCAATCACAAAAGATGTCACTTGATATGCACTCACTGATAAGTGGATATTTGCCCAGAAACCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTTGGTTTTTGCCATTTTaGATGCTTGTTGTGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVLVVQWVVLVSVLITWFLPF*MLVVIP Trigger: TGGAATCACAACAAGCATCAAAAATGGCAAAAACCA...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CCA 72 bp | TGTTTTGGAAGTTGTATCTTGGGTATTCTAGGTTTCTaGGCAAATATCCACTTATCAGTGAGTGCATATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CFGSCILGILGF*ANIHLSVSAYQ Trigger: TTGATATGCACTCACTGATAAGTGGATATTTGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTAAGCACTGTCACCATTaGATGCATAAATACACACCT | + |
|
Preference number: 3 (lower is better) Translates to: VLTPNFVSKTPSMDILFPKHCHH*MHKYTP Trigger: AGGTGTGTATTTATGCATCAAATGGTGACAGTGCTT...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTTTTATGTGGAGTTCCTaGATCCACTTAGACTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLTPNFVSKTPSMDILFPFMWSS*IHLDLR Trigger: TCTCAAGTCTAAGTGGATCAAGGAACTCCACATAAA...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTTGGTTTTTGCCATTTTaGATGCTTGTTGTGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLTPNFVSKTPSMDILFPWFLPF*MLVVIP Trigger: TGGAATCACAACAAGCATCAAAAATGGCAAAAACCA...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR TCA 72 bp | TTCCATGGATATTTTATTCCCTATTCTAGGGAGGAATaGAATATACACGCATTGGTCTTCCTTCTTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FHGYFIPYSREE*NIHALVFLLDF Trigger: AAAATCAAGAAGGAAGACCAATGCGTGTATATTTCATTCCTCCCTAGAATAGGGAATAAAATATCCATGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATGACTACTGGTGCAGATaGAGAGGCCCCGGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: PYPPTPASWPWHSLVLGHDYWCR*RGPGTL Trigger: GAGTGTCCCGGGGCCTCTCCATCTGCACCAGTAGTC...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | TACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAGAAGGAGGACACTCTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPPTPASWPWHSLVLGHIRRRTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCTCAGAGTGTCCTCCTTCT...TATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATAGCGAGAAAAGAGTGTaGTGTGGGGTCTTTAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PYPPTPASWPWHSLVLGHSEKRV*CGVFRL Trigger: CAACCTAAAGACCCCACAGCACACTCTTTTCTCGCT...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | TTCTGCCCTGCTTCCCTACCCACCCACTCCCGCTTCTaGGCCCTGGCATTCCCTTGTACTGGGGCATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCPASLPTHSRF*ALAFPCTGAYK Trigger: TTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGAAGCAGGGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTGACTACTGGTGCAGATaGAGAGGCCCCGGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPDYWCR*RGPGTL Trigger: GAGTGTCCCGGGGCCTCTCCATCTGCACCAGTAGTC...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | CCACATCCTTGCCAGCATCTGCTGTCACCTGACTTTTaGATCCTAGCCATTCTGACTGGAGTGAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPCQHLLSPDF*ILAILTGVRWN Trigger: ATTCCACCTCACTCCAGTCAGAATGGCTAGGATCAAAAAGTCAGGTGACAGCAGATGCTGGCAAGGATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCTTCTGGCTATTATAAATAGGGCTGCTATGTACATAGTGGAGCATGTGCGGTGCCAAGTCCAGTaGGACAGAGGAAGACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQLLAIINRAAMYIVEHVRCQVQ*DRGRLC Trigger: GCACAGTCTTCCTCTGTCTCACTGGACTTGGCACCG...CACATGCTCCACTATGTACATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTTGGCCTGGACCACAGTaGGGAGACTACTGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSILILLHDNRPLCQNLSWPGPQ*GDYWCR Trigger: TCTGCACCAGTAGTCTCCTCACTGTGGTCCAGGCCA...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTAGAAGGAGGACACTCTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSILILLHDNRPLCQNLSRRRTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCTCAGAGTGTCCTCCTTCT...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | CATCCTATAGATGACTGTGAGCATCCACTCCTGTATTaGCCAAGCACTGGAAAAGCCTCACAGGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPIDDCEHPLLY*PSTGKASQETA Trigger: AGCTGTCTCCTGTGAGGCTTTTCCAGTGCTTGGCAAATACAGGAGTGGATGCTCACAGTCATCTATAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCTTTTTGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTTGCAATCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLFVLLTVSFALQKLCNPPMAP*NTASLS Trigger: GCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...ATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACAAAAAGGCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTATTATCAGTATTGAACACTCTTAATATGCCTGATGGCCATCTGCATCGGTGCCAAGTCCAGTaGGACAGAGGAAGACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLSVLNTLNMPDGHLHRCQVQ*DRGRLC Trigger: GCACAGTCTTCCTCTGTCTCACTGGACTTGGCACCG...ATGCAGATGGCCATCAGGCATATTAAGAGTGTTCAATACTGATAATACTCTGAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTGAGCCTCTGCCACATTaGGTGTCTTGGACTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVLVVQWVVLVSVLITEPLPH*VSWTHG Trigger: ACCATGAGTCCAAGACACTCAATGTGGCAGAGGCTC...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAATGCTATCCCGAAAGTTCCCTGTACCCTCCTTCTGCCCTGCTTCCCTTTCTGTAGAGAAGTTTaGAGTTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISNAIPKVPCTLLLPCFPFCREV*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAAACTTCTCTACAGAA...AGGGAAGCAGGGCAGAAGGAGGGTACAGGGAACTTTCGGGATAGCATTTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | GCCCTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTCGATCTTACAGCACAGGCCATTGCTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQKLCNFMRSH*SILQHRPLLFC Trigger: ACAGAACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | AACCACCAGACTGATTTCCAGAATGGTTGTACCAACTaGCAATACCACCAGCAATGGAGGAGTGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHQTDFQNGCTN*QYHQQWRSVPL Trigger: AAGAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGTTGGTACAACCATTCTGGAAATCAGTCTGGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTPNFVSKTPSMDILFPPPMAP*NTASLS Trigger: GCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTTTTAGGTTGAGCCTCTaGCACATTGAGTGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVFRLSL*HIECLG Trigger: TCCAAGACACTCAATGTGGCAGAGGCTCAACCTAAA...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | TGTAAATGTATCCCATTTTCCGTATCCATTCCTCTGTaGAGGGACATCTGGGTTATTTCCAGCTTCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CKCIPFSVSIPL*RDIWVISSFWL Trigger: TAGCCAGAAGCTGGAAATAACCCAGATGTCCCTCAACAGAGGAATGGATACGGAAAATGGGATACATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR GCA 90 bp | GGATCAATTCTCATTCTTCTACATGATAACCGCCCGTTGTGCCAGAATCTTTCTAGATGTATAGGTTTCTaGTCAGTGCTTTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: GSILILLHDNRPLCQNLSRCIGF*SVLWNM Trigger: CATGTTCCAAAGCACTGAGCAGAAACCTATACATCT...AGAAAGATTCTGGCACAACGGGCGGTTATCATGTAGAAGAATGAGAATTGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTATTATCAGTATTGAACACTCTTAATATGCCTGATGGCCATCTGCATTTTAGGTTGAGCCTCTaGCACATTGAGTGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLSVLNTLNMPDGHLHFRLSL*HIECLG Trigger: TCCAAGACACTCAATGTGGCAGAGGCTCAACCTAAA...ATGCAGATGGCCATCAGGCATATTAAGAGTGTTCAATACTGATAATACTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTTTATGAGGTCCCATTTGTCGATCTTACAGCACAGGCCATTGCTGTTCTTCGGCATCCCTTTTaGAAGAAGCATTATGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LQFYEVPFVDLTAQAIAVLRHPF*KKHYDI Trigger: AATATCATAATGCTTCTTTCAAAAGGGATGCCGAAG...AACAGCAATGGCCTGTGCTGTAAGATCGACAAATGGGACCTCATAAAATTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTTTCTGTAGAGAAGTTTaGAGTTCTGAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVLVVQWVVLVSVLITFCREV*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAAACTTCTCTACAGAA...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | TTTGCAAGTGCTTCTCAGCCCTTTGGTATTCCTCAGTaGAGAATTCTTTGTTTAGCTCTGTACCCCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FASASQPFGIPQ*RILCLALYPIF Trigger: AAAAATGGGGTACAGAGCTAAACAAAGAATTCTCAACTGAGGAATACCAAAGGGCTGAGAAGCACTTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTATTATCAGTATTGAACACTCTTAATATGCCTGATGGCCATCTGCATAGATGTATAGGTTTCTaGTCAGTGCTTTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LRVLSVLNTLNMPDGHLHRCIGF*SVLWNM Trigger: CATGTTCCAAAGCACTGAGCAGAAACCTATACATCT...ATGCAGATGGCCATCAGGCATATTAAGAGTGTTCAATACTGATAATACTCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | ACAATTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTaGATCCACTTAGACTTGAGATTTGTACAAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TIFSVSGFMWSS*IHLDLRFVQGD Trigger: ATCTCCTTGTACAAATCTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACACTGAAAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | TGTCTTATTGACAGTATCTTTTGCCCTACAGAAGCTTaGCAATTTTATGAGGTCCCATTTGTCGATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: CLIDSIFCPTEA*QFYEVPFVDLT Trigger: TGTAAGATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAGGGCAAAAGATACTGTCAATAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| 3UTR CAA 72 bp | ATTCTGACTGGAGTGAGGTGGAATCTCAAGGTTGTTTaGATTTGCATTTTCCTGATGATTAAGGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTGVRWNLKVV*ICIFLMIKDVE Trigger: TTCAACATCCTTAATCATCAGGAAAATGCAAATCAAAACAACCTTGAGATTCCACCTCACTCCAGTCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTCTTCGGCATCCCTTTTaGAAGAAGCATTATGATATT | + |
|
Preference number: 4 (lower is better) Translates to: VLTPNFVSKTPSMDILFPLRHPF*KKHYDI Trigger: AATATCATAATGCTTCTTTCAAAAGGGATGCCGAAG...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 72 bp | TCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGACTaGAGATTTGTACAAGGAGATAAGAATGGATCAATT | + |
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Preference number: 4 (lower is better) Translates to: SGFMWSSLIHLD*RFVQGDKNGSI Trigger: AATTGATCCATTCTTATCTCCTTGTACAAATCTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAACCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 72 bp | TCCTTCTTGATTTTCTTGTGTTTTGGAAGTTGTATCTaGGGTATTCTAGGTTTCTGGGCAAATATCCACTTA | + |
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Preference number: 4 (lower is better) Translates to: SFLIFLCFGSCI*GILGFWANIHL Trigger: TAAGTGGATATTTGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| 3UTR CAA 72 bp | GAAATATACACGCATTGGTCTTCCTTCTTGATTTTCTaGTGTTTTGGAAGTTGTATCTTGGGTATTCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: EIYTHWSSFLIF*CFGSCILGILG Trigger: ACCTAGAATACCCAAGATACAACTTCCAAAACACAAGAAAATCAAGAAGGAAGACCAATGCGTGTATATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS-3UTR CAA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATTGTGGGGTCTTTAGGTaGAGCCTCTGCCACATTGAG | + |
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Preference number: 5 (lower is better) Translates to: PYPPTPASWPWHSLVLGHCGVFR*SLCHIE Trigger: CTCAATGTGGCAGAGGCTCAACCTAAAGACCCCACA...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS-3UTR CAA 90 bp | CCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATTTTCTGCTCAGTGCTTaGGAACATGTGCATATAACT | + |
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Preference number: 5 (lower is better) Translates to: PYPPTPASWPWHSLVLGHFLLSA*EHVHIT Trigger: AGTTATATGCACATGTTCCAAAGCACTGAGCAGAAA...ATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS CCA 90 bp | CACTCTGAGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGTTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGATGCTTGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSEQLSAQGEFCREV*SSEGRGHAGDACGE Trigger: TTCTCCACAAGCATCACCAGCATGTCCTCTACCTTCAGAACTCCAAACTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCTCAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS GCA 90 bp | AAATACCATGTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGCACCATGAGGGTGAGAAAAATCCATCTTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: KYHVATGPSHGTLKH*ISQHHEGEKNPSCY Trigger: ATAACAAGATGGATTTTTCTCACCCTCATGGTGCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTACATGGTATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS GCA 90 bp | ATCAAGGAATTGAGTATCCACAAGCAGAGCAGCGAGAAAAGAGTGTaGTGTGGGGTCTTTAGGTTGAGCCTCTGCCACATTGAGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: IKELSIHKQSSEKRV*CGVFRLSLCHIECL Trigger: AAGACACTCAATGTGGCAGAGGCTCAACCTAAAGACCCCACAGCACACTCTTTTCTCGCTGCTCTGCTTGTGGATACTCAATTCCTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS-3UTR CAA 90 bp | GTCTTAACTCCAAACTTTGTCTCTAAAACTCCTTCCATGGATATTTTATTCCCTTGTGGGGTCTTTAGGTaGAGCCTCTGCCACATTGAG | + |
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Preference number: 5 (lower is better) Translates to: VLTPNFVSKTPSMDILFPCGVFR*SLCHIE Trigger: CTCAATGTGGCAGAGGCTCAACCTAAAGACCCCACA...AGGGAATAAAATATCCATGGAAGGAGTTTTAGAGACAAAGTTTGGAGTTAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGTATTATCAGTATTGAACACTCTTAATATGCCTGATGGCCATCTGCATATGCTGATCAAGGAATaGAGTATCCACAAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LRVLSVLNTLNMPDGHLHMLIKE*SIHKQS Trigger: GCTCTGCTTGTGGATACTCAATTCCTTGATCAGCAT...ATGCAGATGGCCATCAGGCATATTAAGAGTGTTCAATACTGATAATACTCTGAG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTACTTGTAGTCCAGTGGGTGGTGTTAGTATCTGTTTTAATCACTTTTCTGCTCAGTGCTTaGGAACATGTGCATATAACT | + |
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Preference number: 5 (lower is better) Translates to: CVCVLVVQWVVLVSVLITFLLSA*EHVHIT Trigger: AGTTATATGCACATGTTCCAAAGCACTGAGCAGAAA...AGTGATTAAAACAGATACTAACACCACCCACTGGACTACAAGTACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS TCA 90 bp | GGCATCCCTTTTGAAAGAAGCATTATGATATTTGTAAGTGTCAAGTaGGCAAGAATGAGATGTATAGGTTTCTGCTCAGTGCTTTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: GIPFERSIMIFVSVK*ARMRCIGFCSVLWN Trigger: GTTCCAAAGCACTGAGCAGAAACCTATACATCTCATTCTTGCTCACTTGACACTTACAAATATCATAATGCTTCTTTCAAAAGGGATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS GCA 72 bp | GTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGCACCATGAGGGTGAGAAAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: VATGPSHGTLKH*ISQHHEGEKNP Trigger: TGGATTTTTCTCACCCTCATGGTGCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS CCA 72 bp | GGTGATGCTTGTGGAGAAGAAATACCATGTAGCCACTaGCCCCTCCCATGGCACCCTGAAACACTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: GDACGEEIPCSH*PLPWHPETLHL Trigger: GAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTACATGGTATTTCTTCTCCACAAGCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS TCA 72 bp | GCAGCGAGAAAAGAGTGTGCTGTGGGGTCTTTAGGTTaGGCCTCTGCCACATTGAGTGTCTTGGACTCATGG | + |
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Preference number: 6 (lower is better) Translates to: AARKECAVGSLG*ASATLSVLDSW Trigger: CCATGAGTCCAAGACACTCAATGTGGCAGAGGCTCAACCTAAAGACCCCACAGCACACTCTTTTCTCGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS GCA 72 bp | AAAAGAGTGTGCTGTGGGGTCTTTAGGTTGAGCCTCTaGCACATTGAGTGTCTTGGACTCATGGTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: KRVCCGVFRLSL*HIECLGLMVMA Trigger: GGCCATCACCATGAGTCCAAGACACTCAATGTGGCAGAGGCTCAACCTAAAGACCCCACAGCACACTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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| CDS GCA 72 bp | TTGAGTATCCACAAGCAGAGCAGCGAGAAAAGAGTGTaGTGTGGGGTCTTTAGGTTGAGCCTCTGCCACATT | + |
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Preference number: 6 (lower is better) Translates to: LSIHKQSSEKRV*CGVFRLSLCHI Trigger: AATGTGGCAGAGGCTCAACCTAAAGACCCCACAGCACACTCTTTTCTCGCTGCTCTGCTTGTGGATACTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091734.2 ENSMUST00000226225.2 ENSMUST00000227017.2 |
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