Pregenerated sensors for VMN1R196 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069295Ensembl transcript IDs: ENSMUST00000091735.2, ENSMUST00000226245.2, ENSMUST00000227516.2, ENSMUST00000228382.2, ENSMUST00000228557.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTTaGTTGTCCATAGTTTGGGCAGGGTCCTGGCAGCAGGCAAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: GAENSQPGAVNSPMS*LSIVWAGSWQQARH Trigger: ATGCCTTGCCTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAAGACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR TCA 90 bp | GCCATGGGAAGAGTTCCATGCCCTCAGGACGGACAGAGGTCACATTaGATGTTGAGGATGAGGTGCCAGAAAATGAGAAGCTCCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: AMGRVPCPQDGQRSH*MLRMRCQKMRSSPG Trigger: ACCAGGGGAGCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGACCTCTGTCCGTCCTGAGGGCATGGAACTCTTCCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CCA 90 bp | AAAGATAGGGTAGGTGGAGGTGAAGACATCACCCTTTTCTGGGGTTaGTCTGCACAGCAGAGTGGAGATGACAGTGAGACAAGTGACATC | + |
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Preference number: 1 (lower is better) Translates to: KDRVGGGEDITLFWG*SAQQSGDDSETSDI Trigger: GATGTCACTTGTCTCACTGTCATCTCCACTCTGCTGTGCAGACCAACCCCAGAAAAGGGTGATGTCTTCACCTCCACCTACCCTATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CCA 90 bp | GGAGAAAAAGATAGGGTAGGTGGAGGTGAAGACATCACCCTTTTCTaGGGTTGGTCTGCACAGCAGAGTGGAGATGACAGTGAGACAAGT | + |
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Preference number: 1 (lower is better) Translates to: GEKDRVGGGEDITLF*GWSAQQSGDDSETS Trigger: ACTTGTCTCACTGTCATCTCCACTCTGCTGTGCAGACCAACCCCAGAAAAGGGTGATGTCTTCACCTCCACCTACCCTATCTTTTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR TCA 90 bp | TTACATGATCCTGGCCAGCTACCTCCTCAACAGAATTTCCTCTCCTaGAAGACCAAACCTGGTTCTTCCCCACCTCTTACAGGTTTCACA | + |
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Preference number: 1 (lower is better) Translates to: LHDPGQLPPQQNFLS*KTKPGSSPPLTGFT Trigger: TGTGAAACCTGTAAGAGGTGGGGAAGAACCAGGTTTGGTCTTTCAGGAGAGGAAATTCTGTTGAGGAGGTAGCTGGCCAGGATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CCA 90 bp | GTGCAGGTACCCAAAAAGACCAGAGGTGTCAGATCTCCTGGGACCTaGAGTTATAAGCCACTGCGAACCATTGATGTACTAGGAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: VQVPKKTRGVRSPGT*SYKPLRTIDVLGIK Trigger: TTTGATTCCTAGTACATCAATGGTTCGCAGTGGCTTATAACTCCAGGTCCCAGGAGATCTGACACCTCTGGTCTTTTTGGGTACCTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CCA 90 bp | CCAGCTACCTCCTCAACAGAATTTCCTCTCCTGAAAGACCAAACCTaGTTCTTCCCCACCTCTTACAGGTTTCACATACTATTCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PATSSTEFPLLKDQT*FFPTSYRFHILFCQ Trigger: TTGACAGAATAGTATGTGAAACCTGTAAGAGGTGGGGAAGAACCAGGTTTGGTCTTTCAGGAGAGGAAATTCTGTTGAGGAGGTAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR GCA 90 bp | ACAATTGATCCAGGTATATTGACATCCACCTCAAATAACAGCCGTTaGAAAGTAAGGAGCAAGAAGATCAGGATTTCAAGGCCAGTATCT | + |
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Preference number: 1 (lower is better) Translates to: TIDPGILTSTSNNSR*KVRSKKIRISRPVS Trigger: AGATACTGGCCTTGAAATCCTGATCTTCTTGCTCCTTACTTTGCAACGGCTGTTATTTGAGGTGGATGTCAATATACCTGGATCAATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR TCA 90 bp | TTAAATAATTACCATGAGAAATTCTTGAAAACGGGCTCTCTCGAATaGTACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LNNYHEKFLKTGSLE*YIADLINHRLQDRV Trigger: GACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTATCATTCGAGAGAGCCCGTTTTCAAGAATTTCTCATGGTAATTATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CAA 90 bp | TGTGGACTAGGAGACCTGGGCCTGAAGGACACACTGGAGATCGTCTaGGTGATGGCCAAGGGCTGCCTTGCCAAGTGGAAGGACATTGGT | + |
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Preference number: 2 (lower is better) Translates to: CGLGDLGLKDTLEIV*VMAKGCLAKWKDIG Trigger: ACCAATGTCCTTCCACTTGGCAAGGCAGCCCTTGGCCATCACCAAGACGATCTCCAGTGTGTCCTTCAGGCCCAGGTCTCCTAGTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CAA 90 bp | GCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTTGCTaGTCCATAGTTTGGGCAGGGTCCTGGCAGCAGGCAAGGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: AENSQPGAVNSPMSC*SIVWAGSWQQARHG Trigger: CCCATGCCTTGCCTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAAGACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTTGCTTGTCCATAGTTTaGGCAGGGTCCTGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCCLSIV*AGSWQQ Trigger: CTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCA...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR CAA 90 bp | CAGAAAATGAGAAGCTCCCCTGGTCTCTCTAGCTTCCCAGGATCTTaGTGTCAAATGGAGGCTGCCTGTTACCAGCTGTGCTGTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: QKMRSSPGLSSFPGS*CQMEAACYQLCCVN Trigger: GTTCACACAGCACAGCTGGTAACAGGCAGCCTCCATTTGACACAAAGATCCTGGGAAGCTAGAGAGACCAGGGGAGCTTCTCATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCGGACAGAGGTCACATTaGATGTTGAGGATGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RWALPIEKVTLALRYTLSGQRSH*MLRMRC Trigger: GCACCTCATCCTCAACATTCAATGTGACCTCTGTCC...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGAAGGGGGCATGCATTaGCCTGGCACACGTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCEGGMH*PGTRRI Trigger: AATTCTACGTGTGCCAGGGCAATGCATGCCCCCTTC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCACACGGCTGAGCTGTaGACTAGGAGACCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTHTAEL*TRRPGP Trigger: AGGCCCAGGTCTCCTAGTCCACAGCTCAGCCGTGTG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGGACAGAGGTCACATTaGATGTTGAGGATGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCGQRSH*MLRMRC Trigger: GCACCTCATCCTCAACATTCAATGTGACCTCTGTCC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCATGTTGAGGATGAGGTaGCAGAAAATGAGAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RWALPIEKVTLALRYTLSMLRMR*QKMRSS Trigger: GGAGCTTCTCATTTTCTGGCACCTCATCCTCAACAT...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGAAGGGGGCATGCATTaGCCTGGCACACGTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFREGGMH*PGTRRI Trigger: AATTCTACGTGTGCCAGGGCAATGCATGCCCCCTTC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGATCTTTGTGTCAAATaGAGGCTGCCTGTTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCDLCVK*RLPVTS Trigger: GCTGGTAACAGGCAGCCTCCATTTGACACAAAGATC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTGAAAGACCAAACCTaGTTCTTCCCCACCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCLKDQT*FFPTSY Trigger: GTAAGAGGTGGGGAAGAACCAGGTTTGGTCTTTCAG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCGAACCTACCTTTACCTaGTTAAGCCTTTCTTACTCC | + |
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Preference number: 2 (lower is better) Translates to: RWALPIEKVTLALRYTLSEPTFT*LSLSYS Trigger: GGAGTAAGAAAGGCTTAAGCAGGTAAAGGTAGGTTC...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGAAGGGGGCATGCATTaGCCTGGCACACGTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTEGGMH*PGTRRI Trigger: AATTCTACGTGTGCCAGGGCAATGCATGCCCCCTTC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACATTGAATGTTGAGGATGAGGTGCCAGAAAATGAGAAGCTCCCCTGGTCTGATCTTTGTGTCAAATaGAGGCTGCCTGTTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: VTLNVEDEVPENEKLPWSDLCVK*RLPVTS Trigger: GCTGGTAACAGGCAGCCTCCATTTGACACAAAGATC...AGACCAGGGGAGCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTTGGAGAGATCTGCCATaGGAAGAGTTCCATGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTWRDLP*EEFHAL Trigger: GAGGGCATGGAACTCTTCCCATGGCAGATCTCTCCA...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGTCGTAGAAATGGTCTaGGTCAAAGGGATTCACTTT | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCVVEMV*VKGIHF Trigger: AAAGTGAATCCCTTTGACTCAGACCATTTCTACGAC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGCCACTGCGAACCATTaGTGTACTAGGAATCAAACG | + |
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Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRATANH*CTRNQT Trigger: CGTTTGATTCCTAGTACATCAATGGTTCGCAGTGGC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTATGTGTCTGTATACATaGGTGCAGGTACCCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCMCLYT*VQVPKK Trigger: CTTTTTGGGTACCTGCACTCATGTATACAGACACAT...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCCACAAACATTTACATaGTCCTGGCCAGCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTPQTFT*SWPATS Trigger: GGAGGTAGCTGGCCAGGATCATGTAAATGTTTGTGG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGAACCTACCTTTACCTaGTTAAGCCTTTCTTACTCC | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCEPTFT*LSLSYS Trigger: GGAGTAAGAAAGGCTTAAGCAGGTAAAGGTAGGTTC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGTCTGTATACATGAGTaGAGGTACCCAAAAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCVCIHE*RYPKRP Trigger: TGGTCTTTTTGGGTACCTGCACTCATGTATACAGAC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGATCTTTGTGTCAAATaGAGGCTGCCTGTTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRDLCVK*RLPVTS Trigger: GCTGGTAACAGGCAGCCTCCATTTGACACAAAGATC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGACTATCTGAAGCTCAGTaGAGAGATCTGCCATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRLSEAQ*RDLPWE Trigger: TTCCCATGGCAGATCTCTCCACTGAGCTTCAGATAG...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCATTGCATCTCATCAGTaGATTGTGTATCTGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RWALPIEKVTLALRYTLSIASHQ*IVYLKD Trigger: ATCCTTCAGATACACAATTCACTGATGAGATGCAAT...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAATGTTGAGGATGAGGTaGCAGAAAATGAGAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRMLRMR*QKMRSS Trigger: GGAGCTTCTCATTTTCTGGCACCTCATCCTCAACAT...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTTCCTTGCTGGCATTATaGCTCTCATCATCATTAGAA | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCSLLAL*LSSSLE Trigger: TTCTAATGATGATGAGAGGCATAATGCCAGCAAGGA...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTTTTATGCTAGACAAGTaGTGTACCTCTGACACTTTG | + |
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Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCFMLDK*CTSDTL Trigger: CAAAGTGTCAGAGGTACAGCACTTGTCTAGCATAAA...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR CCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGATCTTTGTGTCAAATaGAGGCTGCCTGTTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTDLCVK*RLPVTS Trigger: GCTGGTAACAGGCAGCCTCCATTTGACACAAAGATC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGTCAGTCACAGTGGCTaGCACTGTACATTTGGTATT | + |
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Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTVSHSG*HCTFGI Trigger: AATACCAAATGTACAGTGTCAGCCACTGTGACTGAC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGTCTGTATACATGAGTaGAGGTACCCAAAAAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRVCIHE*RYPKRP Trigger: TGGTCTTTTTGGGTACCTGCACTCATGTATACAGAC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAAGATCTCCTGGGACCTaGAGTTATAAGCCACTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKRSPGT*SYKPLR Trigger: TCGCAGTGGCTTATAACTCCAGGTCCCAGGAGATCT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAGCCACTGCGAACCATTaGTGTACTAGGAATCAAACG | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKATANH*CTRNQT Trigger: CGTTTGATTCCTAGTACATCAATGGTTCGCAGTGGC...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTAGGCTCCATTTTCCCTaGAATGGAAATTTCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTRLHFP*NGNFTQ Trigger: CTGTGTGAAATTTCCATTTCAGGGAAAATGGAGCCT...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGAACCTACCTTTACCTaGTTAAGCCTTTCTTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTEPTFT*LSLSYS Trigger: GGAGTAAGAAAGGCTTAAGCAGGTAAAGGTAGGTTC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGATCAAATAACAGCCGTTaGAAAGTAAGGAGCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRSNNSR*KVRSKK Trigger: CTTCTTGCTCCTTACTTTGCAACGGCTGTTATTTGA...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTAGACTGTCTTTCTCATaGTTATATGTGCCTATATAC | + |
|
Preference number: 2 (lower is better) Translates to: RTLVVLRTHSLGQLILQCRLSFS*LYVPIY Trigger: GTATATAGGCACATATAAGCATGAGAAAGACAGTCT...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAACTATCTGAAGCTCAGTaGAGAGATCTGCCATGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKLSEAQ*RDLPWE Trigger: TTCCCATGGCAGATCTCTCCACTGAGCTTCAGATAG...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAACTGAAAGACCAAACCTaGTTCTTCCCCACCTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKLKDQT*FFPTSY Trigger: GTAAGAGGTGGGGAAGAACCAGGTTTGGTCTTTCAG...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGATTGATCCAGGTATATTaGCATCCACCTCAAATAACA | + |
|
Preference number: 2 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRLIQVY*HPPQIT Trigger: TGTTATTTGAGGTGGATGTCAATATACCTGGATCAA...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTAATTCTCCAATGTCTTaGTTGTCCATAGTTTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTNSPMS*LSIVWA Trigger: TGCCCAAACTATGGACAAGCAAGACATTGGAGAATT...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAAATTACATCTATTTTTaGAGGGGGCATGCATTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKNYIYF*RGHALP Trigger: GGGCAATGCATGCCCCCTTCAAAAATAGATGTAATT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTATCTTCTTCAGAATTTaGTCCCTTCAAATCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTIFFRI*SLQING Trigger: GCCATTGATTTGAAGGGATCAAATTCTGAAGAAGAT...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTTTTGATCCAATTCTTTaGCCAGTATCTCCCAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTFDPIL*PVSPKT Trigger: AGTTTTGGGAGATACTGGTCAAAGAATTGGATCAAA...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTAGACTGTCTTTCTCATaGTTATATGTGCCTATATAC | + |
|
Preference number: 2 (lower is better) Translates to: YIADLINHRLQDRVSWYTRLSFS*LYVPIY Trigger: GTATATAGGCACATATAAGCATGAGAAAGACAGTCT...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAATTGCATCTCATCAGTaGATTGTGTATCTGAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKIASHQ*IVYLKD Trigger: ATCCTTCAGATACACAATTCACTGATGAGATGCAAT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAATTGATCCAGGTATATTaGCATCCACCTCAAATAACA | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKLIQVY*HPPQIT Trigger: TGTTATTTGAGGTGGATGTCAATATACCTGGATCAA...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAATCTCATGCTTATATGTaGCTATATACATGTTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKSHAYM*LYTCSL Trigger: GAGCGAACATGTATATAGGCACATATAAGCATGAGA...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | GACACACTGGAGATCGTCTTGGTGATGGCCAAGGGCTaGCTTGCCAAGTGGAAGGACATTGGTGGTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DTLEIVLVMAKG*LAKWKDIGGAE Trigger: CTCAGCACCACCAATGTCCTTCCACTTGGCAAGGCAGCCCTTGGCCATCACCAAGACGATCTCCAGTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGAGAGATCTGCCATGGGAAGAGTTCCATGCCCTCAGGACGGACAGAGGTAGCTTCCCAGGATCTTaGTGTCAAATGGAGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QWRDLPWEEFHALRTDRGSFPGS*CQMEAA Trigger: GGCAGCCTCCATTTGACACAAAGATCCTGGGAAGCT...ACCTCTGTCCGTCCTGAGGGCATGGAACTCTTCCCATGGCAGATCTCTCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | ATCGTCTTGGTGATGGCCAAGGGCTGCCTTGCCAAGTaGAAGGACATTGGTGGTGCTGAGAACTCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IVLVMAKGCLAK*KDIGGAENSQP Trigger: AGGCTGTGAGTTCTCAGCACCACCAATGTCCTTCCACTTGGCAAGGCAGCCCTTGGCCATCACCAAGACGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | GCAGTTAATTCTCCAATGTCTTGCTTGTCCATAGTTTaGGCAGGGTCCTGGCAGCAGGCAAGGCATGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AVNSPMSCLSIV*AGSWQQARHGA Trigger: TGCCCCATGCCTTGCCTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAAGACATTGGAGAATTAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | AACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTTaGTTGTCCATAGTTTGGGCAGGGTCCTGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NSQPGAVNSPMS*LSIVWAGSWQQ Trigger: CTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAAGACATTGGAGAATTAACTGCCCCAGGCTGTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | GTAGGTGGAGGTGAAGACATCACCCTTTTCTGGGGTTaGTCTGCACAGCAGAGTGGAGATGACAGTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VGGGEDITLFWG*SAQQSGDDSET Trigger: TGTCTCACTGTCATCTCCACTCTGCTGTGCAGACCAACCCCAGAAAAGGGTGATGTCTTCACCTCCACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | GATAGGGTAGGTGGAGGTGAAGACATCACCCTTTTCTaGGGTTGGTCTGCACAGCAGAGTGGAGATGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: DRVGGGEDITLF*GWSAQQSGDDS Trigger: ACTGTCATCTCCACTCTGCTGTGCAGACCAACCCCAGAAAAGGGTGATGTCTTCACCTCCACCTACCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTTTGCTTGTCCATAGTTaGGGCAGGGTCCTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCLLVHS*GRVLAA Trigger: TGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAA...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACATTGAATGTTGAGGATGAGGTGCCAGAAAATGAGAAGCTCCCCTGGTCTAGCTTCCCAGGATCTTaGTGTCAAATGGAGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VTLNVEDEVPENEKLPWSSFPGS*CQMEAA Trigger: GGCAGCCTCCATTTGACACAAAGATCCTGGGAAGCT...AGACCAGGGGAGCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | AGAGTTCCATGCCCTCAGGACGGACAGAGGTCACATTaGATGTTGAGGATGAGGTGCCAGAAAATGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVPCPQDGQRSH*MLRMRCQKMRS Trigger: GCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGACCTCTGTCCGTCCTGAGGGCATGGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGCTGAGCCCCCAGTCTaGTTCCTATTGTTCTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCAEPPV*FLLFYL Trigger: AAGATAGAACAATAGGAACAAGACTGGGGGCTCAGC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTTTGCTTGTCCATAGTTaGGGCAGGGTCCTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTLLVHS*GRVLAA Trigger: TGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAA...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | GTCAAATGGAGGCTGCCTGTTACCAGCTGTGCTGTGTaGACCTACCTTTACCTGCTTAAGCCTTTCTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: VKWRLPVTSCAV*TYLYLLKPFLL Trigger: GAGTAAGAAAGGCTTAAGCAGGTAAAGGTAGGTTCACACAGCACAGCTGGTAACAGGCAGCCTCCATTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | AGCCACTTTGCCCATAATACCAGGCTCCATTTTCCCTaGAATGGAAATTTCACACAGGAGCACACGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SHFAHNTRLHFP*NGNFTQEHTAE Trigger: CTCAGCCGTGTGCTCCTGTGTGAAATTTCCATTTCAGGGAAAATGGAGCCTGGTATTATGGGCAAAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | CCCAAAAAGACCAGAGGTGTCAGATCTCCTGGGACCTaGAGTTATAAGCCACTGCGAACCATTGATGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: PKKTRGVRSPGT*SYKPLRTIDVL Trigger: TAGTACATCAATGGTTCGCAGTGGCTTATAACTCCAGGTCCCAGGAGATCTGACACCTCTGGTCTTTTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCCAAGTGGAAGGACATaGGTGGTGCTGAGAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTPSGRT*VVLRTH Trigger: GTGAGTTCTCAGCACCACCAATGTCCTTCCACTTGG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTGATTTCATTTCCTTaGCATGGCTATCCTAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCLISFP*HGYPSG Trigger: TCCACTAGGATAGCCATGCAAAGGAAATGAAATCAG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTTGTACCTCTGACACTTaGATCCAATTCTTTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCCTSDT*IQFFDQ Trigger: CTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACA...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGTTTTCCCTCTGTGCTaGAATTTGGACATAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCVFPLC*NLDIEL Trigger: AAGCTCTATGTCCAAATTCAAGCACAGAGGGAAAAC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTTCTCCAATGTCTTGCTaGTCCATAGTTTGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTSPMSC*SIVWAG Trigger: CCCTGCCCAAACTATGGACAAGCAAGACATTGGAGA...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | TTATGGAGATGCTGCCACATTGCTTTGCTGACTATCTaGAGCTCAGTGGAGAGATCTGCCATGGGAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWRCCHIALLTI*SSVERSAMGRV Trigger: AACTCTTCCCATGGCAGATCTCTCCACTGAGCTTCAGATAGTCAGCAAAGCAATGTGGCAGCATCTCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAAGCTTCCCAGGATCTTaGTGTCAAATGGAGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKSFPGS*CQMEAA Trigger: GGCAGCCTCCATTTGACACAAAGATCCTGGGAAGCT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGGAATCAAGCTCAAGTaGTCAGGCTTAGCAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTGIKLK*SGLAVS Trigger: AGACACTGCTAAGCCTGACAACTTGAGCTTGATTCC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTAAATTACATCTATTTTaGAAGGGGGCATGCATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCKLHLF*KGACIA Trigger: GGCAATGCATGCCCCCTTCAAAAATAGATGTAATTT...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGCTGAGCCCCCAGTCTaGTTCCTATTGTTCTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTAEPPV*FLLFYL Trigger: AAGATAGAACAATAGGAACAAGACTGGGGGCTCAGC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTGCTTTAGGCTTAAACTaGAAAACATACACAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCALGLN*KTYTEG Trigger: GCCTTCTGTGTATGTTTTCAAGTTTAAGCCTAAAGC...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTAGGATTCTAGCAGTATaGTCTATTCTGGGAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCRILAV*SILGSF Trigger: AAAGCTTCCCAGAATAGACAATACTGCTAGAATCCT...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | TTAAAGGAGTCGGTCTTCTTCTACCACAAGAGTCCTTaGAATCAAGCTCAAGTTGTCAGGCTTAGCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKESVFFYHKSP*NQAQVVRLSSV Trigger: GACACTGCTAAGCCTGACAACTTGAGCTTGATTCCAAGGACTCTTGTGGTAGAAGAAGACCGACTCCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTAAATGCATATCTTGTTaGCTATCTAGGTACTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCKCISC*LSRYCA Trigger: AGCACAGTACCTAGATAGCAAACAAGATATGCATTT...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGACTGATTTCATTTCCTTaGCATGGCTATCCTAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRLISFP*HGYPSG Trigger: TCCACTAGGATAGCCATGCAAAGGAAATGAAATCAG...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCCAGTCTTGTTCCTATaGTTCTATCTTCTTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RTLVVLRTHSLGQLILQCPVLFL*FYLLQN Trigger: ATTCTGAAGAAGATAGAACAATAGGAACAAGACTGG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | GAAATTCTTGAAAACGGGCTCTCTCGAATGATACATTaGAGATCTGATCAATCACAGGCTCCAGGACAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EILENGLSRMIH*RSDQSQAPGQS Trigger: ACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTATCATTCGAGAGAGCCCGTTTTCAAGAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CCA 72 bp | TCCTCAACAGAATTTCCTCTCCTGAAAGACCAAACCTaGTTCTTCCCCACCTCTTACAGGTTTCACATACTA | + |
|
Preference number: 3 (lower is better) Translates to: SSTEFPLLKDQT*FFPTSYRFHIL Trigger: TAGTATGTGAAACCTGTAAGAGGTGGGGAAGAACCAGGTTTGGTCTTTCAGGAGAGGAAATTCTGTTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCTGATTTCATTTCCTTaGCATGGCTATCCTAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTLISFP*HGYPSG Trigger: TCCACTAGGATAGCCATGCAAAGGAAATGAAATCAG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTTGTACCTCTGACACTTaGATCCAATTCTTTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTCTSDT*IQFFDQ Trigger: CTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACA...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTGTTTTCCCTCTGTGCTaGAATTTGGACATAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: YIADLINHRLQDRVSWYTVFPLC*NLDIEL Trigger: AAGCTCTATGTCCAAATTCAAGCACAGAGGGAAAAC...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | CCCTCAGCCCTGGGATATTTTCAAGTAGCTAACAAATaGATATCTTGTTTGCTATCTAGGTACTGTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSALGYFQVANK*ISCLLSRYCAW Trigger: CCAAGCACAGTACCTAGATAGCAAACAAGATATGCATTTGTTAGCTACTTGAAAATATCCCAGGGCTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | CCAGGTATATTGACATCCACCTCAAATAACAGCCGTTaGAAAGTAAGGAGCAAGAAGATCAGGATTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGILTSTSNNSR*KVRSKKIRISR Trigger: CCTTGAAATCCTGATCTTCTTGCTCCTTACTTTGCAACGGCTGTTATTTGAGGTGGATGTCAATATACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | TACCCAAATGTTTACAGCAATCCACAAACATTTACATaGTCCTGGCCAGCTACCTCCTCAACAGAATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YPNVYSNPQTFT*SWPATSSTEFP Trigger: AGGAAATTCTGTTGAGGAGGTAGCTGGCCAGGATCATGTAAATGTTTGTGGATTGCTGTAAACATTTGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAAAATTACATCTATTTTaGAAGGGGGCATGCATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKKLHLF*KGACIA Trigger: GGCAATGCATGCCCCCTTCAAAAATAGATGTAATTT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | CTGTTACCAGCTGTGCTGTGTGAACCTACCTTTACCTaGTTAAGCCTTTCTTACTCCACTAAAATGTATATA | + |
|
Preference number: 3 (lower is better) Translates to: LLPAVLCEPTFT*LSLSYSTKMYI Trigger: TATATACATTTTAGTGGAGTAAGAAAGGCTTAAGCAGGTAAAGGTAGGTTCACACAGCACAGCTGGTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAAAATGCATATCTTGTTaGCTATCTAGGTACTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKKCISC*LSRYCA Trigger: AGCACAGTACCTAGATAGCAAACAAGATATGCATTT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR TCA 72 bp | CTTCTCTTTCTTACACTCTACCAAAGGCATTTAGGTTaGATCCATGTAAACAGTGAATGCTTCTGTGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLFLTLYQRHLG*IHVNSECFCDY Trigger: GTAGTCACAGAAGCATTCACTGTTTACATGGATTCAACCTAAATGCCTTTGGTAGAGTGTAAGAAAGAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | CAGTTAATTGTAGACTGTCTTTCTCATGCTTATATGTaGCTATATACATGTTCGCTCCTTGCTGGCATTATG | + |
|
Preference number: 3 (lower is better) Translates to: QLIVDCLSHAYM*LYTCSLLAGIM Trigger: CATAATGCCAGCAAGGAGCGAACATGTATATAGGCACATATAAGCATGAGAAAGACAGTCTACAATTAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR GCA 72 bp | ACTGTCCTAACAGTTAATTGTAGACTGTCTTTCTCATaGTTATATGTGCCTATATACATGTTCGCTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TVLTVNCRLSFS*LYVPIYMFAPC Trigger: GCAAGGAGCGAACATGTATATAGGCACATATAAGCATGAGAAAGACAGTCTACAATTAACTGTTAGGACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CAA 72 bp | AGAAGCTCCCCTGGTCTCTCTAGCTTCCCAGGATCTTaGTGTCAAATGGAGGCTGCCTGTTACCAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSPGLSSFPGS*CQMEAACYQLC Trigger: GCACAGCTGGTAACAGGCAGCCTCCATTTGACACAAAGATCCTGGGAAGCTAGAGAGACCAGGGGAGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CAA 72 bp | TCACAGCCTGGGGCAGTTAATTCTCCAATGTCTTGCTaGTCCATAGTTTGGGCAGGGTCCTGGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPGAVNSPMSC*SIVWAGSWQQA Trigger: TGCCTGCTGCCAGGACCCTGCCCAAACTATGGACAAGCAAGACATTGGAGAATTAACTGCCCCAGGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCTGCTTGGACCACTGTaGGGAGACTGCTGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVVLRTHSLGQLILQCLLGPL*GDCWCR Trigger: TCTGCACCAGCAGTCTCCTCACAGTGGTCCAAGCAG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGACTGCTGGTGCAGATaGACAGACCCCGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRDCWCR*TDPGPS Trigger: GGATGGCCCGGGGTCTGTCCATCTGCACCAGCAGTC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGAGATCTGCCATGGGAAGAGTTCCATGCCCTCAGGACGGACAGAGGTCTCATGATAACTGCTTaGACCACTGTGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QWRDLPWEEFHALRTDRGLMITA*TTVRRL Trigger: CAGTCTCCTCACAGTGGTCCAAGCAGTTATCATGAG...ACCTCTGTCCGTCCTGAGGGCATGGAACTCTTCCCATGGCAGATCTCTCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAGAGATCTGCCATGGGAAGAGTTCCATGCCCTCAGGACGGACAGAGGTCAGTGCCAAGTCCAGTaGAAAGAAGGAATACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QWRDLPWEEFHALRTDRGQCQVQ*KEGIQL Trigger: TAACTGTATTCCTTCTTTTCACTGGACTTGGCACTG...ACCTCTGTCCGTCCTGAGGGCATGGAACTCTTCCCATGGCAGATCTCTCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCCGGGCCATCCTTTCTaGACAGTGCTTCAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLVVLRTHSLGQLILQCPGHPF*TVLQSW Trigger: CCAAGATTGAAGCACTGTGCAGAAAGGATGGCCCGG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226245.2 |
||
| CDS-3UTR TCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCAGAAGTCCATCCCTCTaGATCAGCATAAATGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RWALPIEKVTLALRYTLSRSPSL*ISINGL Trigger: TAGCCCATTTATGCTGATTCAGAGGGATGGACTTCT...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CAA 72 bp | AAGAGTTCCATGCCCTCAGGACGGACAGAGGTCACATaGAATGTTGAGGATGAGGTGCCAGAAAATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSSMPSGRTEVT*NVEDEVPENEK Trigger: CTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGACCTCTGTCCGTCCTGAGGGCATGGAACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAACTGCTTGGACCACTGTaGGGAGACTGCTGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKLLGPL*GDCWCR Trigger: TCTGCACCAGCAGTCTCCTCACAGTGGTCCAAGCAG...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR CCA 90 bp | GTCACATTGAATGTTGAGGATGAGGTGCCAGAAAATGAGAAGCTCCCCTGGTCTCTCATGATAACTGCTTaGACCACTGTGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLNVEDEVPENEKLPWSLMITA*TTVRRL Trigger: CAGTCTCCTCACAGTGGTCCAAGCAGTTATCATGAG...AGACCAGGGGAGCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCAGTGCCAAGTCCAGTaGAAAGAAGGAATACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVVLRTHSLGQLILQCQCQVQ*KEGIQL Trigger: TAACTGTATTCCTTCTTTTCACTGGACTTGGCACTG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCAAAAATGGAAACATTTaGCACAGTGCCAAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWALPIEKVTLALRYTLSKNGNI*HSAKSS Trigger: ACTGGACTTGGCACTGTGGCAAATGTTTCCATTTTT...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGGCCTTGCCCATAGAGAAAGTCACACTGGCATTGAGGTATACCCTCAGCAAATGGGCTAAGAACTaGATAACCAATGGTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RWALPIEKVTLALRYTLSKWAKN*ITNGQK Trigger: TTTCTGACCATTGGTTATGCAGTTCTTAGCCCATTT...GCTGAGGGTATACCTCAATGCCAGTGTGACTTTCTCTATGGGCAAGGCCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR CCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCTCATGATAACTGCTTaGACCACTGTGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YIADLINHRLQDRVSWYTLMITA*TTVRRL Trigger: CAGTCTCCTCACAGTGGTCCAAGCAGTTATCATGAG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | GTCACATTGAATGTTGAGGATGAGGTGCCAGAAAATGAGAAGCTCCCCTGGTCTAAAAATGGAAACATTTaGCACAGTGCCAAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTLNVEDEVPENEKLPWSKNGNI*HSAKSS Trigger: ACTGGACTTGGCACTGTGGCAAATGTTTCCATTTTT...AGACCAGGGGAGCTTCTCATTTTCTGGCACCTCATCCTCAACATTCAATGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAAGAGAGAGAAGCACATaGCATTTAGACCTTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRRERST*HLDLSL Trigger: CAGACTAAGGTCTAAATGGCATGTGCTTCTCTCTCT...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| CDS-3UTR GCA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTAGAGAGAGAAGCACATaGCATTTAGACCTTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIADLINHRLQDRVSWYTRERST*HLDLSL Trigger: CAGACTAAGGTCTAAATGGCATGTGCTTCTCTCTCT...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CAA 72 bp | AGCTTTATGCTAGACAAGTGCTGTACCTCTGACACTTaGATCCAATTCTTTGACCAGTATCTCCCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFMLDKCCTSDT*IQFFDQYLPKL Trigger: CAGTTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTTGTCTAGCATAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
||
| 3UTR CAA 72 bp | CAACACAGTCATCAAAATACAATTGATCCAGGTATATaGACATCCACCTCAAATAACAGCCGTTGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QHSHQNTIDPGI*TSTSNNSRCKV Trigger: TACTTTGCAACGGCTGTTATTTGAGGTGGATGTCAATATACCTGGATCAATTGTATTTTGATGACTGTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS-3UTR CAA 90 bp | AGGACATTGGTGGTGCTGAGAACTCACAGCCTGGGGCAGTTAATTCTCCAATGTCAAAAATGGAAACATTaGCCACAGTGCCAAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RTLVVLRTHSLGQLILQCQKWKH*PQCQVQ Trigger: CTGGACTTGGCACTGTGGCAAATGTTTCCATTTTTG...ACATTGGAGAATTAACTGCCCCAGGCTGTGAGTTCTCAGCACCACCAATGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAGCTCATGATAACTGCTaGGACCACTGTGAGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRAHDNC*DHCEET Trigger: AGTCTCCTCACAGTGGTCCAAGCAGTTATCATGAGC...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAAAACTGCTGAGCCCCCAGTCTTGTTCCTATTGTTCTATCTTCTTCAGAACCCTAAAGCTGCAATaGTCACTGGCATTACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LPKLLSPQSCSYCSIFFRTLKLQ*SLALPW Trigger: CCAAGGTAATGCCAGTGACAATTGCAGCTTTAGGGT...TCTGAAGAAGATAGAACAATAGGAACAAGACTGGGGGCTCAGCAGTTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS-3UTR CAA 90 bp | TACATTGCAGATCTGATCAATCACAGGCTCCAGGACAGAGTCTCATGGTATACTCAAAAATGGAAACATTaGCCACAGTGCCAAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: YIADLINHRLQDRVSWYTQKWKH*PQCQVQ Trigger: CTGGACTTGGCACTGTGGCAAATGTTTCCATTTTTG...AGTATACCATGAGACTCTGTCCTGGAGCCTGTGATTGATCAGATCTGCAATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCTGTACCTCTGACACTTTGATCCAATTCTTTGACCAGTATCTCCCAAAAACCCTAAAGCTGCAATaGTCACTGGCATTACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KCCTSDTLIQFFDQYLPKTLKLQ*SLALPW Trigger: CCAAGGTAATGCCAGTGACAATTGCAGCTTTAGGGT...TTTTGGGAGATACTGGTCAAAGAATTGGATCAAAGTGTCAGAGGTACAGCACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS CCA 72 bp | CAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QLSAQGEFCREA*SSEGRGHAGGA Trigger: AGCACCACCAGCATGTCCTCTACCTTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000091735.2 ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS GCA 72 bp | GTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGGACCATGAGGATGAGAAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: VATGPSHGTLKH*ISQDHEDEKNV Trigger: AACATTTTTCTCATCCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000091735.2 ENSMUST00000226245.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS CCA 72 bp | TTCAGCCAGAAGTCCATCCCTCTGAATCAGCATAAATaGGCTAAGAACTGCATAACCAATGGTCAGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: FSQKSIPLNQHK*AKNCITNGQKF Trigger: GAATTTCTGACCATTGGTTATGCAGTTCTTAGCCCATTTATGCTGATTCAGAGGGATGGACTTCTGGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000091735.2 ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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| CDS GCA 72 bp | TCCATCCCTCTGAATCAGCATAAATGGGCTAAGAACTaGATAACCAATGGTCAGAAATTCTTGAAAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: SIPLNQHKWAKN*ITNGQKFLKMN Trigger: ATTCATTTTCAAGAATTTCTGACCATTGGTTATGCAGTTCTTAGCCCATTTATGCTGATTCAGAGGGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000091735.2 ENSMUST00000226245.2 ENSMUST00000227516.2 ENSMUST00000228382.2 ENSMUST00000228557.2 |
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