Pregenerated sensors for VMN1R193 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046932Ensembl transcript IDs: ENSMUST00000057516.2, ENSMUST00000227457.2, ENSMUST00000227562.2, ENSMUST00000228303.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGGAACTTTGGTGAACAGCACATAGGGCACCTACAGGAGCCTCCCTaGGGAGCCTGCAGCATAGGGGGCCTGGAGGACAAGGGCCCAGGG | + |
Preference number: 1 (lower is better) Translates to: GNFGEQHIGHLQEPP*GACSIGGLEDKGPG Trigger: CCCTGGGCCCTTGTCCTCCAGGCCCCCTATGCTGCAGGCTCCCCAGGGAGGCTCCTGTAGGTGCCCTATGTGCTGTTCACCAAAGTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 90 bp | GGAGTTCTAAGGCCTGCAAAGTCCTGTCCCTGGACAACACCACACTaGATGGGCTTCAGCGAGCATCTCCATTCTGGGCCTGAGCATGGC | + |
Preference number: 1 (lower is better) Translates to: GVLRPAKSCPWTTPH*MGFSEHLHSGPEHG Trigger: GCCATGCTCAGGCCCAGAATGGAGATGCTCGCTGAAGCCCATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | GACCCCCACTTCATTCTCAGCTCTTCCGCAGTTCCCAGTGGTACATaGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCC | + |
Preference number: 1 (lower is better) Translates to: DPHFILSSSAVPSGT*VSKNPRTRWPQTSS Trigger: GGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAGAATGAAGTGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | GCCTGTGGACCCCCACTTCATTCTCAGCTCTTCCGCAGTTCCCAGTaGTACATGGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAAC | + |
Preference number: 1 (lower is better) Translates to: ACGPPLHSQLFRSSQ*YMGVQEPKNQMAPN Trigger: GTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAGAATGAAGTGGGGGTCCACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | TGCGGGACCAGCCAGAGAACTACTCCTCGTACTCCCTTCAGGCTTTaGGCTAGATCCAGCCTGTGGACCCCCACTTCATTCTCAGCTCTT | + |
Preference number: 1 (lower is better) Translates to: CGTSQRTTPRTPFRL*ARSSLWTPTSFSAL Trigger: AAGAGCTGAGAATGAAGTGGGGGTCCACAGGCTGGATCTAGCCCAAAGCCTGAAGGGAGTACGAGGAGTAGTTCTCTGGCTGGTCCCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | ACTACTCCTCGTACTCCCTTCAGGCTTTGGGCTAGATCCAGCCTGTaGACCCCCACTTCATTCTCAGCTCTTCCGCAGTTCCCAGTGGTA | + |
Preference number: 1 (lower is better) Translates to: TTPRTPFRLWARSSL*TPTSFSALPQFPVV Trigger: TACCACTGGGAACTGCGGAAGAGCTGAGAATGAAGTGGGGGTCCACAGGCTGGATCTAGCCCAAAGCCTGAAGGGAGTACGAGGAGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | CGTGCCTGGGAGAGCGCTAGCAAGCAAGCTCAAGTCTGCAAGAGATaGAGAAAGCAGAACCTCAAGTTTCCAGATGGCCCATCAGCTTGT | + |
Preference number: 1 (lower is better) Translates to: RAWESASKQAQVCKR*RKQNLKFPDGPSAC Trigger: ACAAGCTGATGGGCCATCTGGAAACTTGAGGTTCTGCTTTCTCCATCTCTTGCAGACTTGAGCTTGCTTGCTAGCGCTCTCCCAGGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 90 bp | ATTTTTCTTGTCCTTCTGGTCTGGAGGCTGTGGAGTTCTAAGGCCTaGAAAGTCCTGTCCCTGGACAACACCACACTGCATGGGCTTCAG | + |
Preference number: 1 (lower is better) Translates to: IFLVLLVWRLWSSKA*KVLSLDNTTLHGLQ Trigger: CTGAAGCCCATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCCACAGCCTCCAGACCAGAAGGACAAGAAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | CTGCATGACAGGAATGATGGGTGTTGGGGACAGCATACCATGACATaGATGACATCTAGGTCCCTGAGGAGCAGGAGACACATTCCTCCA | + |
Preference number: 1 (lower is better) Translates to: LHDRNDGCWGQHTMT*MTSRSLRSRRHIPP Trigger: TGGAGGAATGTGTCTCCTGCTCCTCAGGGACCTAGATGTCATCCATGTCATGGTATGCTGTCCCCAACACCCATCATTCCTGTCATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | CAGGAGGTCTTTGGAGTGACAGCCCTTCTCACCAAGTGTGGGACATaGAAGGTATCTTGGTTCCTGGTTGAGGTAAGGCTCAAAATCCCT | + |
Preference number: 1 (lower is better) Translates to: QEVFGVTALLTKCGT*KVSWFLVEVRLKIP Trigger: AGGGATTTTGAGCCTTACCTCAACCAGGAACCAAGATACCTTTCATGTCCCACACTTGGTGAGAAGGGCTGTCACTCCAAAGACCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 90 bp | AACCAAAAAGTGTGTGTGTGTGTGTGTGTGTGTGCATCATATGGGTaGCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAACCTCTGAA | + |
Preference number: 1 (lower is better) Translates to: NQKVCVCVCVCASYG*LLHMEARKGVRTSE Trigger: TTCAGAGGTTCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACACACACACACACACACACACTTTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | CCAGGGAATCCTCCATCAGGAATAAGGAACTGTCTGCAGCAGACCTaGATGGTGACATATCAGAAGTCCACAGGCAGTTTGTTTGTAGAA | + |
Preference number: 1 (lower is better) Translates to: PGNPPSGIRNCLQQT*MVTYQKSTGSLFVE Trigger: TTCTACAAACAAACTGCCTGTGGACTTCTGATATGTCACCATCCAGGTCTGCTGCAGACAGTTCCTTATTCCTGATGGAGGATTCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | GTTGGGAAACATGGGAGCATACAGGTCAACATATTTGTGGAGAGGTaGCTCAGAGTTCTACATCTGGATTCTCAGCCTAGAGGAAGTGAT | + |
Preference number: 1 (lower is better) Translates to: VGKHGSIQVNIFVER*LRVLHLDSQPRGSD Trigger: ATCACTTCCTCTAGGCTGAGAATCCAGATGTAGAACTCTGAGCCACCTCTCCACAAATATGTTGACCTGTATGCTCCCATGTTTCCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | GTCATCATGTTGGGAAACATGGGAGCATACAGGTCAACATATTTGTaGAGAGGTGGCTCAGAGTTCTACATCTGGATTCTCAGCCTAGAG | + |
Preference number: 1 (lower is better) Translates to: VIMLGNMGAYRSTYL*RGGSEFYIWILSLE Trigger: CTCTAGGCTGAGAATCCAGATGTAGAACTCTGAGCCACCTCTCCACAAATATGTTGACCTGTATGCTCCCATGTTTCCCAACATGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | ACAATTCTAATTTTGGGTGACTGCATGCCCTTCTGCAATTCCCTATaGAGGATGCAGCATGCTAAACTGCATGACAGGAATGATGGGTGT | + |
Preference number: 1 (lower is better) Translates to: TILILGDCMPFCNSL*RMQHAKLHDRNDGC Trigger: ACACCCATCATTCCTGTCATGCAGTTTAGCATGCTGCATCCTTCATAGGGAATTGCAGAAGGGCATGCAGTCACCCAAAATTAGAATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | TCACATTTAATCTGTTCATGCCCACACCCCATGTGGAGAGGTGAGTaGAATGTTGTTGCTTTGCCCTATTTAGTACCTCTCAGATACAGC | + |
Preference number: 1 (lower is better) Translates to: SHLICSCPHPMWRGE*NVVALPYLVPLRYS Trigger: GCTGTATCTGAGAGGTACTAAATAGGGCAAAGCAACAACATTTCACTCACCTCTCCACATGGGGTGTGGGCATGAACAGATTAAATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | GTGCTCACATTTAATCTGTTCATGCCCACACCCCATGTGGAGAGGTaGGTGAAATGTTGTTGCTTTGCCCTATTTAGTACCTCTCAGATA | + |
Preference number: 1 (lower is better) Translates to: VLTFNLFMPTPHVER*VKCCCFALFSTSQI Trigger: TATCTGAGAGGTACTAAATAGGGCAAAGCAACAACATTTCACTCACCTCTCCACATGGGGTGTGGGCATGAACAGATTAAATGTGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | TACAGGTCAACATATTTGTGGAGAGGTGGCTCAGAGTTCTACATCTaGATTCTCAGCCTAGAGGAAGTGATTAGCACATTGGGTGTAGTT | + |
Preference number: 1 (lower is better) Translates to: YRSTYLWRGGSEFYI*ILSLEEVISTLGVV Trigger: AACTACACCCAATGTGCTAATCACTTCCTCTAGGCTGAGAATCCAGATGTAGAACTCTGAGCCACCTCTCCACAAATATGTTGACCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | AGACTAAAACTCTGGCATGGGAAACAATACAATTCTAATTTTGGGTaGCTGCATGCCCTTCTGCAATTCCCTATGAAGGATGCAGCATGC | + |
Preference number: 1 (lower is better) Translates to: RLKLWHGKQYNSNFG*LHALLQFPMKDAAC Trigger: GCATGCTGCATCCTTCATAGGGAATTGCAGAAGGGCATGCAGTCACCCAAAATTAGAATTGTATTGTTTCCCATGCCAGAGTTTTAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | GTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTaGGAACCTCTGAAATTAGAGTTACAGGAGGTTATTAACCATTAT | + |
Preference number: 1 (lower is better) Translates to: VHHMGACCTWRLEKV*EPLKLELQEVINHY Trigger: ATAATGGTTAATAACCTCCTGTAACTCTAATTTCAGAGGTTCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 90 bp | GCTATCCTTCCCACACATATAGATTATAACATTTCCTTCATCTGGTaGTCACATTTAATCTGTTCATGCCCACACCCCATGTGGAGAGGT | + |
Preference number: 1 (lower is better) Translates to: AILPTHIDYNISFIW*SHLICSCPHPMWRG Trigger: ACCTCTCCACATGGGGTGTGGGCATGAACAGATTAAATGTGAGCACCAGATGAAGGAAATGTTATAATCTATATGTGTGGGAAGGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | GTAGACTCAATTCAGATCTTCAATTTGATGAGGTACCTAAAGGCCTaGAGGGCTTTGCCAATAAGCTTTCCTTCTCAGATATTCCTCCCT | + |
Preference number: 1 (lower is better) Translates to: VDSIQIFNLMRYLKA*RALPISFPSQIFLP Trigger: AGGGAGGAATATCTGAGAAGGAAAGCTTATTGGCAAAGCCCTCCAGGCCTTTAGGTACCTCATCAAATTGAAGATCTGAATTGAGTCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | CTACTAAAGGTATTTAACGTCACGCCCACCCTGAGAAATCGGGTATaGTTTTACTCATCCACTTTCTGCCATGACAATAAATGCCTTAAA | + |
Preference number: 1 (lower is better) Translates to: LLKVFNVTPTLRNRV*FYSSTFCHDNKCLK Trigger: TTTAAGGCATTTATTGTCATGGCAGAAAGTGGATGAGTAAAACCATACCCGATTTCTCAGGGTGGGCGTGACGTTAAATACCTTTAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | ATTGCTATCCTTCCCACACATATAGATTATAACATTTCCTTCATCTaGTGCTCACATTTAATCTGTTCATGCCCACACCCCATGTGGAGA | + |
Preference number: 1 (lower is better) Translates to: IAILPTHIDYNISFI*CSHLICSCPHPMWR Trigger: TCTCCACATGGGGTGTGGGCATGAACAGATTAAATGTGAGCACCAGATGAAGGAAATGTTATAATCTATATGTGTGGGAAGGATAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | TGTCTTCTCCACTTTGTAAGAGACCTTCAGATAAAGGATACTTTCTaGCACCCTTCTTCTTCACTTGTTTTCCTGCTCATTGGGTTAGAA | + |
Preference number: 1 (lower is better) Translates to: CLLHFVRDLQIKDTF*HPSSSLVFLLIGLE Trigger: TTCTAACCCAATGAGCAGGAAAACAAGTGAAGAAGAAGGGTGTCAGAAAGTATCCTTTATCTGAAGGTCTCTTACAAAGTGGAGAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | TTTACACACCATGCATATATGTGTATAGAGAGTATCAATGCCACTTaGGGAGCTAATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAA | + |
Preference number: 1 (lower is better) Translates to: FTHHAYMCIESINAT*GANGLSRAIVYLAK Trigger: TTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATTAGCTCCTCAAGTGGCATTGATACTCTCTATACACATATATGCATGGTGTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 90 bp | ATTAATGCTGTGACCACACAGCAACGTCATGAAAGTGTTTGGAATTaGCTTACAGGTTTTAGTTTAATCCGTTGTTTAGATACTGGGACT | + |
Preference number: 1 (lower is better) Translates to: INAVTTQQRHESVWN*LTGFSLIRCLDTGT Trigger: AGTCCCAGTATCTAAACAACGGATTAAACTAAAACCTGTAAGGCAATTCCAAACACTTTCATGACGTTGCTGTGTGGTCACAGCATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 90 bp | TTGCGGATTGCTGAATTAAGGATTAACATGATTCTTTCTAACCACTaGCACTTTTGCCCATGTTGTGTACCAATGGAACTTCAAAGTGAA | + |
Preference number: 1 (lower is better) Translates to: LRIAELRINMILSNH*HFCPCCVPMELQSE Trigger: TTCACTTTGAAGTTCCATTGGTACACAACATGGGCAAAAGTGTCAGTGGTTAGAAAGAATCATGTTAATCCTTAATTCAGCAATCCGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 90 bp | TTTCTTATTAATGCTGTGACCACACAGCAACGTCATGAAAGTGTTTaGAATTGCCTTACAGGTTTTAGTTTAATCCGTTGTTTAGATACT | + |
Preference number: 1 (lower is better) Translates to: FLINAVTTQQRHESV*NCLTGFSLIRCLDT Trigger: AGTATCTAAACAACGGATTAAACTAAAACCTGTAAGGCAATTCCAAACACTTTCATGACGTTGCTGTGTGGTCACAGCATTAATAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAGCACCCGAGCAGCAGTaGGAGGACAGAACCCAAGCA | + |
Preference number: 2 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPAPEQQ*EDRTQA Trigger: TGCTTGGGTTCTGTCCTCTCACTGCTGCTCGGGTGC...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAGTGGCTCAGTGTTCCTaGGCAGTTTACACAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPVAQCS*AVYTAL Trigger: CAGGGCTGTGTAAACTGCTCAGGAACACTGAGCCAC...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCATGGCCTCAGCTCCCCTaGCAGATCTGTTTGGTACTC | + |
Preference number: 2 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPWPQLP*QICLVL Trigger: GAGTACCAAACAGATCTGGCAGGGGAGCTGAGGCCA...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGTGGCCTCAGCTCCCCTaGCAGATCTGTTTGGTACTC | + |
Preference number: 2 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVWPQLP*QICLVL Trigger: GAGTACCAAACAGATCTGGCAGGGGAGCTGAGGCCA...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCGGGAGCCAGCTGTTGTaGCTCAGTGTTCCTGAGCAG | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTGSQLL*LSVPEQ Trigger: CTGCTCAGGAACACTGAGCCACAACAGCTGGCTCCC...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCGCAAAGTCCTGTCCCTaGACAACACCACACTGCATG | + |
Preference number: 2 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTAKSCP*TTPHCM Trigger: CATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGC...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGCTGGTCTGGAGGCTGTaGAGTTCTAAGGCCTGCAAA | + |
Preference number: 2 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVLVWRL*SSKACK Trigger: TTTGCAGGCCTTAGAACTCCACAGCCTCCAGACCAG...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGGAGCTGCAGCGAGCTaGAGGGGAACTTTGGTGAAC | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCGAAAS*RGTLVN Trigger: GTTCACCAAAGTTCCCCTTCAGCTCGCTGCAGCTCC...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAGGAGCTGCAGCGAGCTaGAGGGGAACTTTGGTGAAC | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRGAAAS*RGTLVN Trigger: GTTCACCAAAGTTCCCCTTCAGCTCGCTGCAGCTCC...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGGGAGCTGCAGCGAGCTaGAGGGGAACTTTGGTGAAC | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMGAAAS*RGTLVN Trigger: GTTCACCAAAGTTCCCCTTCAGCTCGCTGCAGCTCC...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAAGGAATGATGGGTGTTaGGGACAGCATACCATGACA | + |
Preference number: 2 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPRNDGC*GQHTMT Trigger: TGTCATGGTATGCTGTCCCCAACACCCATCATTCCT...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGGGGAGCCAGCTGTTGTaGCTCAGTGTTCCTGAGCAG | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMGSQLL*LSVPEQ Trigger: CTGCTCAGGAACACTGAGCCACAACAGCTGGCTCCC...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGGCTCAGTGTTCCTaGGCAGTTTACACAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCVAQCS*AVYTAL Trigger: CAGGGCTGTGTAAACTGCTCAGGAACACTGAGCCAC...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGGTGGCTCAGTGTTCCTaGGCAGTTTACACAGCCCTG | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMVAQCS*AVYTAL Trigger: CAGGGCTGTGTAAACTGCTCAGGAACACTGAGCCAC...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCGAGAATTTCAACTCTTaGCCAGGGAGAGGACAAGGG | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTENFNS*PGRGQG Trigger: CCCTTGTCCTCTCCCTGGTCAAGAGTTGAAATTCTC...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGTGTCTGCAGCAGACCTaGATGGTGACATATCAGAAG | + |
Preference number: 2 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVCLQQT*MVTYQK Trigger: CTTCTGATATGTCACCATCCAGGTCTGCTGCAGACA...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGCAGCATACCATGACATaGATGACATCTAGGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVQHTMT*MTSRSL Trigger: CAGGGACCTAGATGTCATCCATGTCATGGTATGCTG...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGAGGAATGATGGGTGTTaGGGACAGCATACCATGACA | + |
Preference number: 2 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVRNDGC*GQHTMT Trigger: TGTCATGGTATGCTGTCCCCAACACCCATCATTCCT...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCCAGTTTACACAGCCCTaGACTCAGGAACTGTCACTC | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTQFTQP*TQELSL Trigger: GAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTG...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGATGTTCCCATTTCTCCTaGCCTCAGCCTTGGACTACG | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRCSHFS*PQPWTT Trigger: CGTAGTCCAAGGCTGAGGTCAGGAGAAATGGGAACA...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTTGTTCCCATTTCTCCTaGCCTCAGCCTTGGACTACG | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCCSHFS*PQPWTT Trigger: CGTAGTCCAAGGCTGAGGTCAGGAGAAATGGGAACA...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGTGGAGTTCTAAGGCCTaGAAAGTCCTGTCCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMWSSKA*KVLSLD Trigger: GTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCCA...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAGCAAAGTCCTGTCCCTaGACAACACCACACTGCATG | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRAKSCP*TTPHCM Trigger: CATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGC...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTCTGGTCTGGAGGCTGTaGAGTTCTAAGGCCTGCAAA | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCLVWRL*SSKACK Trigger: TTTGCAGGCCTTAGAACTCCACAGCCTCCAGACCAG...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGAGCAGACCTGGATGGTaGCATATCAGAAGTCCACAG | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMSRPGW*HIRSPQ Trigger: CTGTGGACTTCTGATATGTCACCATCCAGGTCTGCT...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCGCAATCTCTGAACAGTaGCATTTCCCCTGTGTTTTC | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTAISEQ*HFPCVF Trigger: GAAAACACAGGGGAAATGTCACTGTTCAGAGATTGC...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCGGGGTTCAATCACCTTaGAATGCCAAATGTTCTTTG | + |
Preference number: 2 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTGVQSP*NAKCSL Trigger: CAAAGAACATTTGGCATTTCAAGGTGATTGAACCCC...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAGATAGGAATGCTAGGTaGGGCACAGAGCTCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRDRNAR*GTELFF Trigger: GAAGAAGAGCTCTGTGCCTCACCTAGCATTCCTATC...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCAAGCAAGCTCAAGTCTaGAAGAGATGGAGAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTKQAQV*KRWRKQ Trigger: CTGCTTTCTCCATCTCTTGCAGACTTGAGCTTGCTT...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCAATTGCCCAGGTGCATaGTGTAAAAGCAATTCTGGA | + |
Preference number: 2 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTNCPGA*CKSNSG Trigger: TCCAGAATTGCTTTTACAGCATGCACCTGGGCAATT...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTCTTGTCCTTCTGGTCTaGAGGCTGTGGAGTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCLVLLV*RLWSSK Trigger: CTTAGAACTCCACAGCCTCCAGACCAGAAGGACAAG...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCTTTTTCTTGTCCTTCTaGTCTGGAGGCTGTGGAGTT | + |
Preference number: 2 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTFFLSF*SGGCGV Trigger: AACTCCACAGCCTCCAGACCAGAAGGACAAGAAAAA...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCATCCATTACCAGAAAGTaGAGGAATATACTGGAACTA | + |
Preference number: 2 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPSITRK*RNILEL Trigger: TAGTTCCAGTATATTCCTTCACTTTCTGGTAATGGA...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGATGTCTGCAGCAGACCTaGATGGTGACATATCAGAAG | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRCLQQT*MVTYQK Trigger: CTTCTGATATGTCACCATCCAGGTCTGCTGCAGACA...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGACAGCATACCATGACATaGATGACATCTAGGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRQHTMT*MTSRSL Trigger: CAGGGACCTAGATGTCATCCATGTCATGGTATGCTG...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTCCGTTGTTTAGATACTaGGACTCTGCAAAGCCAAGC | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCPLFRY*DSAKPS Trigger: GCTTGGCTTTGCAGAGTCCCAGTATCTAAACAACGG...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTCACACAGCAACGTCATaGAAGTGTTTGGAATTGCCT | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCHTATS*KCLELP Trigger: AGGCAATTCCAAACACTTTCATGACGTTGCTGTGTG...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGCACACAGCAACGTCATaGAAGTGTTTGGAATTGCCT | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMHTATS*KCLELP Trigger: AGGCAATTCCAAACACTTTCATGACGTTGCTGTGTG...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGCAATCTCTGAACAGTaGCATTTCCCCTGTGTTTTC | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCAISEQ*HFPCVF Trigger: GAAAACACAGGGGAAATGTCACTGTTCAGAGATTGC...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGCACCCGAGCAGCAGTaGGAGGACAGAACCCAAGCA | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIAPEQQ*EDRTQA Trigger: TGCTTGGGTTCTGTCCTCTCACTGCTGCTCGGGTGC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAATGAGGGTCATTGTGTaGAGTGTGCTAAAGCAGAAG | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRMRVIV*SVLKQK Trigger: CTTCTGCTTTAGCACACTGCACACAATGACCCTCAT...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTTGCAGCATGCTAAACTaGATGACAGGAATGATGGGT | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCCSMLN*MTGMMG Trigger: ACCCATCATTCCTGTCATGCAGTTTAGCATGCTGCA...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGGAAAAAGAGGAAGCCTaGAACTTTGGGGAACAATTG | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMEKEEA*NFGEQL Trigger: CAATTGTTCCCCAAAGTTTCAGGCTTCCTCTTTTTC...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGGGGGTTCAATCACCTTaGAATGCCAAATGTTCTTTG | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMGVQSP*NAKCSL Trigger: CAAAGAACATTTGGCATTTCAAGGTGATTGAACCCC...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTTCCTTCAGTAACTGTTaGGATGTTTCCACTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCSFSNC*DVSTSQ Trigger: CTGAGAAGTGGAAACATCTCAACAGTTACTGAAGGA...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTAATTGCCCAGGTGCATaGTGTAAAAGCAATTCTGGA | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCNCPGA*CKSNSG Trigger: TCCAGAATTGCTTTTACAGCATGCACCTGGGCAATT...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGAATTGCCCAGGTGCATaGTGTAAAAGCAATTCTGGA | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMNCPGA*CKSNSG Trigger: TCCAGAATTGCTTTTACAGCATGCACCTGGGCAATT...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGCATGTTGTGTACCAATaGAACTTCAAAGTGAACCGC | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMHVVYQ*NFKVNR Trigger: GCGGTTCACTTTGAAGTTCCATTGGTACACAACATG...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGACATGTTGTGTACCAATaGAACTTCAAAGTGAACCGC | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRHVVYQ*NFKVNR Trigger: GCGGTTCACTTTGAAGTTCCATTGGTACACAACATG...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATCAGCATACCATGACATaGATGACATCTAGGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYQHTMT*MTSRSL Trigger: CAGGGACCTAGATGTCATCCATGTCATGGTATGCTG...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGGGAGCCAGCTGTTGTaGCTCAGTGTTCCTGAGCAG | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIGSQLL*LSVPEQ Trigger: CTGCTCAGGAACACTGAGCCACAACAGCTGGCTCCC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 90 bp | CTACTTGAGAAACCCACAACCAAGACTGTTGAATGCATGCATTCCTaGGGAGAATTTCAACTCTTGACCAGGGAGAGGACAAGGGAGAGA | + |
Preference number: 2 (lower is better) Translates to: LLEKPTTKTVECMHS*GEFQLLTRERTRER Trigger: TCTCTCCCTTGTCCTCTCCCTGGTCAAGAGTTGAAATTCTCCCAAGGAATGCATGCATTCAACAGTCTTGGTTGTGGGTTTCTCAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTTGTTTTCCTGCTCATTaGGTTAGAACAGCCAATAGT | + |
Preference number: 2 (lower is better) Translates to: ERTRERERERERERERVCCFPAH*VRTANS Trigger: ACTATTGGCTGTTCTAACCCAATGAGCAGGAAAACA...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTAACCCAAGAACCAGATaGCCCCAAACCAGCTCCAGC | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDINPRTR*PQTSSS Trigger: GCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTT...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGACTGAGAAATCGGGTATaGTTTTACTCATCCACTTTC | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRLRNRV*FYSSTF Trigger: GAAAGTGGATGAGTAAAACCATACCCGATTTCTCAG...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | TTGAGGCTTAGGACAGCACAGAACAGTCCTAATTGCCCAGGTGCATGCTGTAAAGAAAAAGAGGAAGCCTaGAACTTTGGGGAACAATTG | + |
Preference number: 2 (lower is better) Translates to: LRLRTAQNSPNCPGACCKEKEEA*NFGEQL Trigger: CAATTGTTCCCCAAAGTTTCAGGCTTCCTCTTTTTC...TTTACAGCATGCACCTGGGCAATTAGGACTGTTCTGTGCTGTCCTAAGCCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGTCCATTACCAGAAAGTaGAGGAATATACTGGAACTA | + |
Preference number: 2 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMSITRK*RNILEL Trigger: TAGTTCCAGTATATTCCTTCACTTTCTGGTAATGGA...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAATAAAGGATACTTTCTaGCACCCTTCTTCTTCACTT | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRIKDTF*HPSSSL Trigger: AAGTGAAGAAGAAGGGTGTCAGAAAGTATCCTTTAT...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | GTCCACAGGCAGTTTGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACCTCAGCATGAGGGTCATTGTGTaGAGTGTGCTAAAGCAGAAG | + |
Preference number: 2 (lower is better) Translates to: VHRQFVCRKVVPISPDLSMRVIV*SVLKQK Trigger: CTTCTGCTTTAGCACACTGCACACAATGACCCTCAT...GCTGAGGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTTGGAGTTCTAAGGCCTaGAAAGTCCTGTCCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIWSSKA*KVLSLD Trigger: GTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCCA...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGCTAGATCCAGCCTGTaGACCCCCACTTCATTCTCA | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIARSSL*TPTSFS Trigger: TGAGAATGAAGTGGGGGTCCACAGGCTGGATCTAGC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGAGAATTTCAACTCTTaGCCAGGGAGAGGACAAGGG | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIENFNS*PGRGQG Trigger: CCCTTGTCCTCTCCCTGGTCAAGAGTTGAAATTCTC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTCAGTTTACACAGCCCTaGACTCAGGAACTGTCACTC | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIQFTQP*TQELSL Trigger: GAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTG...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAAACATTTCCTTCATCTaGTGCTCACATTTAATCTGT | + |
Preference number: 2 (lower is better) Translates to: VCASYGCLLHMEARKGVRNISFI*CSHLIC Trigger: ACAGATTAAATGTGAGCACCAGATGAAGGAAATGTT...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATATAAAGGATACTTTCTaGCACCCTTCTTCTTCACTT | + |
Preference number: 2 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYIKDTF*HPSSSL Trigger: AAGTGAAGAAGAAGGGTGTCAGAAAGTATCCTTTAT...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGAAGCAAGCTCAAGTCTaGAAGAGATGGAGAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: GLRLYRFHLCVTALQLDLKQAQV*KRWRKQ Trigger: CTGCTTTCTCCATCTCTTGCAGACTTGAGCTTGCTT...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTCCGTTGTTTAGATACTaGGACTCTGCAAAGCCAAGC | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIPLFRY*DSAKPS Trigger: GCTTGGCTTTGCAGAGTCCCAGTATCTAAACAACGG...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CAA 90 bp | ATTCAGATCTTCAATTTGATGAGGTACCTAAAGGCCTGGAGGGCTTaGCCAATAAGCTTTCCTTCTCAGATATTCCTCCCTACTAAAGGT | + |
Preference number: 2 (lower is better) Translates to: IQIFNLMRYLKAWRA*PISFPSQIFLPTKG Trigger: ACCTTTAGTAGGGAGGAATATCTGAGAAGGAAAGCTTATTGGCAAAGCCCTCCAGGCCTTTAGGTACCTCATCAAATTGAAGATCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR TCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGGAAAAAGAGGAAGCCTaGAACTTTGGGGAACAATTG | + |
Preference number: 2 (lower is better) Translates to: GLRLYRFHLCVTALQLDLEKEEA*NFGEQL Trigger: CAATTGTTCCCCAAAGTTTCAGGCTTCCTCTTTTTC...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTAAGCAAGCTCAAGTCTaGAAGAGATGGAGAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIKQAQV*KRWRKQ Trigger: CTGCTTTCTCCATCTCTTGCAGACTTGAGCTTGCTT...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGCATGTTGTGTACCAATaGAACTTCAAAGTGAACCGC | + |
Preference number: 2 (lower is better) Translates to: GLRLYRFHLCVTALQLDLHVVYQ*NFKVNR Trigger: GCGGTTCACTTTGAAGTTCCATTGGTACACAACATG...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTTTTTTCTTGTCCTTCTaGTCTGGAGGCTGTGGAGTT | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIFFLSF*SGGCGV Trigger: AACTCCACAGCCTCCAGACCAGAAGGACAAGAAAAA...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR GCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGTTCTATTTCTCCTTCTaGTCTGGTGAATTCTGTGAA | + |
Preference number: 2 (lower is better) Translates to: GLRLYRFHLCVTALQLDLFYFSF*SGEFCE Trigger: TTCACAGAATTCACCAGAGCAGAAGGAGAAATAGAA...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR GCA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTTTCTATTTCTCCTTCTaGTCTGGTGAATTCTGTGAA | + |
Preference number: 2 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIFYFSF*SGEFCE Trigger: TTCACAGAATTCACCAGAGCAGAAGGAGAAATAGAA...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | GGTGAACAGCACATAGGGCACCTACAGGAGCCTCCCTaGGGAGCCTGCAGCATAGGGGGCCTGGAGGACAAG | + |
Preference number: 3 (lower is better) Translates to: GEQHIGHLQEPP*GACSIGGLEDK Trigger: CTTGTCCTCCAGGCCCCCTATGCTGCAGGCTCCCCAGGGAGGCTCCTGTAGGTGCCCTATGTGCTGTTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | GAGCATGGCAGTCCTTCCATCAGCAGCCGAACCCCATaGACCCGAGCAGCAGTGAGAGGACAGAACCCAAGC | + |
Preference number: 3 (lower is better) Translates to: EHGSPSISSRTP*TRAAVRGQNPS Trigger: GCTTGGGTTCTGTCCTCTCACTGCTGCTCGGGTGCATGGGGTTCGGCTGCTGATGGAAGGACTGCCATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | AGGCCTGCAAAGTCCTGTCCCTGGACAACACCACACTaGATGGGCTTCAGCGAGCATCTCCATTCTGGGCCT | + |
Preference number: 3 (lower is better) Translates to: RPAKSCPWTTPH*MGFSEHLHSGP Trigger: AGGCCCAGAATGGAGATGCTCGCTGAAGCCCATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGCAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CTGCAAAGTCCTGTCCCTGGACAACACCACACTGCATaGGCTTCAGCGAGCATCTCCATTCTGGGCCTGAGC | + |
Preference number: 3 (lower is better) Translates to: LQSPVPGQHHTA*ASASISILGLS Trigger: GCTCAGGCCCAGAATGGAGATGCTCGCTGAAGCCCATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | GGCTGTGGAGTTCTAAGGCCTGCAAAGTCCTGTCCCTaGACAACACCACACTGCATGGGCTTCAGCGAGCAT | + |
Preference number: 3 (lower is better) Translates to: GCGVLRPAKSCP*TTPHCMGFSEH Trigger: ATGCTCGCTGAAGCCCATGCAGTGTGGTGTTGTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CGTACTCCCTTCAGGCTTTGGGCTAGATCCAGCCTGTaGACCCCCACTTCATTCTCAGCTCTTCCGCAGTTC | + |
Preference number: 3 (lower is better) Translates to: RTPFRLWARSSL*TPTSFSALPQF Trigger: GAACTGCGGAAGAGCTGAGAATGAAGTGGGGGTCCACAGGCTGGATCTAGCCCAAAGCCTGAAGGGAGTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | CCTCTCTGTGCTCTCAGCCATACCCAAGATCAAGCCTaGCACACACCAAAACAAGGACTCCCCCTACTGCGG | + |
Preference number: 3 (lower is better) Translates to: PLCALSHTQDQA*HTPKQGLPLLR Trigger: CCGCAGTAGGGGGAGTCCTTGTTTTGGTGTGTGTCAGGCTTGATCTTGGGTATGGCTGAGAGCACAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | AAGCTTGGTCGAGTTCTGGTATCCTGTCTCCCCAAGTaGCTGAGTCTTGTGGTAGAGCGGATGCAGGACTGC | + |
Preference number: 3 (lower is better) Translates to: KLGRVLVSCLPK*LSLVVERMQDC Trigger: GCAGTCCTGCATCCGCTCTACCACAAGACTCAGCCACTTGGGGAGACAGGATACCAGAACTCGACCAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CAGCTGTCCCACACCTCAGACTCTGCTTTCCCACCTTaGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACA | + |
Preference number: 3 (lower is better) Translates to: QLSHTSDSAFPP*SSVLKFPYGLT Trigger: TGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGCAGAGTCTGAGGTGTGGGACAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | AGCCAGAGAACTACTCCTCGTACTCCCTTCAGGCTTTaGGCTAGATCCAGCCTGTGGACCCCCACTTCATTC | + |
Preference number: 3 (lower is better) Translates to: SQRTTPRTPFRL*ARSSLWTPTSF Trigger: GAATGAAGTGGGGGTCCACAGGCTGGATCTAGCCCAAAGCCTGAAGGGAGTACGAGGAGTAGTTCTCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CAA 90 bp | CCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTAGTGCTCCTGACCTCAGCCTaGGACTACGGCTATATAGAT | + |
Preference number: 3 (lower is better) Translates to: PTLEQCPQVSLWPDTHLVLLTSA*DYGYID Trigger: ATCTATATAGCCGTAGTCCAAGGCTGAGGTCAGGAG...CACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | TTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATaGCCTGACACCCACCTAGTGACGGGTAAGCTTGGT | + |
Preference number: 3 (lower is better) Translates to: FPTLEQCPQVSL*PDTHLVTGKLG Trigger: ACCAAGCTTACCCGTCACTAGGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CCCCCACTTCATTCTCAGCTCTTCCGCAGTTCCCAGTaGTACATGGGTGTCCAAGAACCCAAGAACCAGATG | + |
Preference number: 3 (lower is better) Translates to: PPLHSQLFRSSQ*YMGVQEPKNQM Trigger: CATCTGGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAGAATGAAGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | CTACTAGATAGCCTGGCTGAACCCTCAGGAGGTCTTTaGAGTGACAGCCCTTCTCACCAAGTGTGGGACATG | + |
Preference number: 3 (lower is better) Translates to: LLDSLAEPSGGL*SDSPSHQVWDM Trigger: CATGTCCCACACTTGGTGAGAAGGGCTGTCACTCCAAAGACCTCCTGAGGGTTCAGCCAGGCTATCTAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CAA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAACCCTTCTTCTTCACTaGTTTTCCTGCTCATTGGGT | + |
Preference number: 3 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPTLLLH*FSCSLG Trigger: ACCCAATGAGCAGGAAAACAAGTGAAGAAGAAGGGT...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | TATAAGTGGGAGCCAGCTGTTGTGGCTCAGTGTTCCTaGGCAGTTTACACAGCCCTGGACTCAGGAACTGTC | + |
Preference number: 3 (lower is better) Translates to: YKWEPAVVAQCS*AVYTALDSGTV Trigger: GACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGAGCCACAACAGCTGGCTCCCACTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | AGGAATGATGGGTGTTGGGGACAGCATACCATGACATaGATGACATCTAGGTCCCTGAGGAGCAGGAGACAC | + |
Preference number: 3 (lower is better) Translates to: RNDGCWGQHTMT*MTSRSLRSRRH Trigger: GTGTCTCCTGCTCCTCAGGGACCTAGATGTCATCCATGTCATGGTATGCTGTCCCCAACACCCATCATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | TTCATTCTCAGCTCTTCCGCAGTTCCCAGTGGTACATaGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAA | + |
Preference number: 3 (lower is better) Translates to: FILSSSAVPSGT*VSKNPRTRWPQ Trigger: TTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAGAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGCTCCTGACCTCAGCCTaGGACTACGGCTATATAGAT | + |
Preference number: 3 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMLLTSA*DYGYID Trigger: ATCTATATAGCCGTAGTCCAAGGCTGAGGTCAGGAG...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAAAGTCCACAGGCAGTTaGTTTGTAGAAAAGTTGTTC | + |
Preference number: 3 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPKSTGS*FVEKLF Trigger: GAACAACTTTTCTACAAACAAACTGCCTGTGGACTT...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCATCATATGGGTaGCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGA | + |
Preference number: 3 (lower is better) Translates to: VCVCVCVCASYG*LLHMEARKGVR Trigger: TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACACACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCGTGACTGCTCTTCAGTaGGACTTGGTGTATATAATT | + |
Preference number: 3 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTVTALQ*DLVYII Trigger: AATTATATACACCAAGTCCAACTGAAGAGCAGTCAC...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR TCA 72 bp | TTTGGAGTGACAGCCCTTCTCACCAAGTGTGGGACATaGAAGGTATCTTGGTTCCTGGTTGAGGTAAGGCTC | + |
Preference number: 3 (lower is better) Translates to: FGVTALLTKCGT*KVSWFLVEVRL Trigger: GAGCCTTACCTCAACCAGGAACCAAGATACCTTTCATGTCCCACACTTGGTGAGAAGGGCTGTCACTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | GGCACAGAGCTCTTCTTCTTGTCCACTATCCACTCATaGGAACTACTAGATAGCCTGGCTGAACCCTCAGGA | + |
Preference number: 3 (lower is better) Translates to: GTELFFLSTIHS*ELLDSLAEPSG Trigger: TCCTGAGGGTTCAGCCAGGCTATCTAGTAGTTCTCATGAGTGGATAGTGGACAAGAAGAAGAGCTCTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CCTCCATCAGGAATAAGGAACTGTCTGCAGCAGACCTaGATGGTGACATATCAGAAGTCCACAGGCAGTTTG | + |
Preference number: 3 (lower is better) Translates to: PPSGIRNCLQQT*MVTYQKSTGSL Trigger: CAAACTGCCTGTGGACTTCTGATATGTCACCATCCAGGTCTGCTGCAGACAGTTCCTTATTCCTGATGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCAAGTCCACAGGCAGTTaGTTTGTAGAAAAGTTGTTC | + |
Preference number: 3 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTKSTGS*FVEKLF Trigger: GAACAACTTTTCTACAAACAAACTGCCTGTGGACTT...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | CAGCATGCTAAACTGCATGACAGGAATGATGGGTGTTaGGGACAGCATACCATGACATGGATGACATCTAGG | + |
Preference number: 3 (lower is better) Translates to: QHAKLHDRNDGC*GQHTMTWMTSR Trigger: CCTAGATGTCATCCATGTCATGGTATGCTGTCCCCAACACCCATCATTCCTGTCATGCAGTTTAGCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | TTTTTGATTTTTCTTGTCCTTCTGGTCTGGAGGCTGTaGAGTTCTAAGGCCTGCAAAGTCCTGTCCCTGGAC | + |
Preference number: 3 (lower is better) Translates to: FLIFLVLLVWRL*SSKACKVLSLD Trigger: GTCCAGGGACAGGACTTTGCAGGCCTTAGAACTCCACAGCCTCCAGACCAGAAGGACAAGAAAAATCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCGATCTGGTCATTCTTTaGAATTTGACACATCTGGTA | + |
Preference number: 3 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTDLVIL*NLTHLV Trigger: TACCAGATGTGTCAAATTCAAAAGAATGACCAGATC...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCGCTCTTCAGTTGGACTaGGTGTATATAATTATTCAG | + |
Preference number: 3 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTALQLD*VYIIIQ Trigger: CTGAATAATTATATACACCAAGTCCAACTGAAGAGC...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGACTGCTCTTCAGTaGGACTTGGTGTATATAATT | + |
Preference number: 3 (lower is better) Translates to: ERTRERERERERERERVCVTALQ*DLVYII Trigger: AATTATATACACCAAGTCCAACTGAAGAGCAGTCAC...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CAA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATACCCTTCTTCTTCACTaGTTTTCCTGCTCATTGGGT | + |
Preference number: 3 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYTLLLH*FSCSLG Trigger: ACCCAATGAGCAGGAAAACAAGTGAAGAAGAAGGGT...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGATTAGCTTCTTGTCCTaGTCTTCTCCACTTTGTAAG | + |
Preference number: 3 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMISFLS*SSPLCK Trigger: CTTACAAAGTGGAGAAGACAAGGACAAGAAGCTAAT...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTATTAGCTTCTTGTCCTaGTCTTCTCCACTTTGTAAG | + |
Preference number: 3 (lower is better) Translates to: ERTRERERERERERERVCISFLS*SSPLCK Trigger: CTTACAAAGTGGAGAAGACAAGGACAAGAAGCTAAT...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR TCA 72 bp | CCCAAGCATGGCTGGCATTCAGGGGTTCAATCACCTTaGAATGCCAAATGTTCTTTGTATACCCTAACGGGT | + |
Preference number: 3 (lower is better) Translates to: PKHGWHSGVQSP*NAKCSLYTLTG Trigger: ACCCGTTAGGGTATACAAAGAACATTTGGCATTTCAAGGTGATTGAACCCCTGAATGCCAGCCATGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAGATCTGGTCATTCTTTaGAATTTGACACATCTGGTA | + |
Preference number: 3 (lower is better) Translates to: VCASYGCLLHMEARKGVRDLVIL*NLTHLV Trigger: TACCAGATGTGTCAAATTCAAAAGAATGACCAGATC...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GCCTCAGCTCCCCTGCCAGATCTGTTTGGTACTCCTTCAGTAACTGTTGAGATGCTATATAGATTTCATTaGTGTGTGACTGCTCTTCAG | + |
Preference number: 3 (lower is better) Translates to: ASAPLPDLFGTPSVTVEMLYRFH*CVTALQ Trigger: CTGAAGAGCAGTCACACACAAATGAAATCTATATAG...CATCTCAACAGTTACTGAAGGAGTACCAAACAGATCTGGCAGGGGAGCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGAAGACAGGAAAGATTaGTGGGTCTTTATAAGACTA | + |
Preference number: 3 (lower is better) Translates to: ERTRERERERERERERVCEDRKD*WVFIRL Trigger: TAGTCTTATAAAGACCCACAAATCTTTCCTGTCTTC...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR TCA 72 bp | ATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTaGGAACCTCTGAAATTAGAGTTACAGGAGGTTATT | + |
Preference number: 3 (lower is better) Translates to: MGACCTWRLEKV*EPLKLELQEVI Trigger: AATAACCTCCTGTAACTCTAATTTCAGAGGTTCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR TCA 72 bp | AGCCTAGAGGAAGTGATTAGCACATTGGGTGTAGTTTaGGCATCTGAAACTTCAAACCTGCCTCCATTGACC | + |
Preference number: 3 (lower is better) Translates to: SLEEVISTLGVV*ASETSNLPPLT Trigger: GGTCAATGGAGGCAGGTTTGAAGTTTCAGATGCTCAAACTACACCCAATGTGCTAATCACTTCCTCTAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR GCA 72 bp | AAGTGGCTGAGTCTTGTGGTAGAGCGGATGCAGGACTaGATAACCTTACAACTGGCACCAACATTTTCTTTA | + |
Preference number: 3 (lower is better) Translates to: KWLSLVVERMQD*ITLQLAPTFSL Trigger: TAAAGAAAATGTTGGTGCCAGTTGTAAGGTTATGCAGTCCTGCATCCGCTCTACCACAAGACTCAGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | CTAACCACTGACACTTTTGCCCATGTTGTGTACCAATaGAACTTCAAAGTGAACCGCAGTCATTGTCCTTGG | + |
Preference number: 3 (lower is better) Translates to: LTTDTFAHVVYQ*NFKVNRSHCPW Trigger: CCAAGGACAATGACTGCGGTTCACTTTGAAGTTCCATTGGTACACAACATGGGCAAAAGTGTCAGTGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | TTGGGAAACATGGGAGCATACAGGTCAACATATTTGTaGAGAGGTGGCTCAGAGTTCTACATCTGGATTCTC | + |
Preference number: 3 (lower is better) Translates to: LGNMGAYRSTYL*RGGSEFYIWIL Trigger: GAGAATCCAGATGTAGAACTCTGAGCCACCTCTCCACAAATATGTTGACCTGTATGCTCCCATGTTTCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | ACATATTTGTGGAGAGGTGGCTCAGAGTTCTACATCTaGATTCTCAGCCTAGAGGAAGTGATTAGCACATTG | + |
Preference number: 3 (lower is better) Translates to: TYLWRGGSEFYI*ILSLEEVISTL Trigger: CAATGTGCTAATCACTTCCTCTAGGCTGAGAATCCAGATGTAGAACTCTGAGCCACCTCTCCACAAATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATGATCTGGTCATTCTTTaGAATTTGACACATCTGGTA | + |
Preference number: 3 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYDLVIL*NLTHLV Trigger: TACCAGATGTGTCAAATTCAAAAGAATGACCAGATC...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | TTGAGGCTTAGGACAGCACAGAACAGTCCTAATTGCCCAGGTGCATGCTGTAAAGAGGAGTTCTCTTTTTaGAGAGCAATTGTAGTTTCA | + |
Preference number: 3 (lower is better) Translates to: LRLRTAQNSPNCPGACCKEEFSF*RAIVVS Trigger: TGAAACTACAATTGCTCTCAAAAAAGAGAACTCCTC...TTTACAGCATGCACCTGGGCAATTAGGACTGTTCTGTGCTGTCCTAAGCCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATCTATATAGATTTCATTaGTGTGTGACTGCTCTTCAG | + |
Preference number: 3 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYLYRFH*CVTALQ Trigger: CTGAAGAGCAGTCACACACAAATGAAATCTATATAG...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR CCA 72 bp | GTATTTAACGTCACGCCCACCCTGAGAAATCGGGTATaGTTTTACTCATCCACTTTCTGCCATGACAATAAA | + |
Preference number: 3 (lower is better) Translates to: VFNVTPTLRNRV*FYSSTFCHDNK Trigger: TTTATTGTCATGGCAGAAAGTGGATGAGTAAAACCATACCCGATTTCTCAGGGTGGGCGTGACGTTAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | CCCACACATATAGATTATAACATTTCCTTCATCTGGTaGTCACATTTAATCTGTTCATGCCCACACCCCATG | + |
Preference number: 3 (lower is better) Translates to: PTHIDYNISFIW*SHLICSCPHPM Trigger: CATGGGGTGTGGGCATGAACAGATTAAATGTGAGCACCAGATGAAGGAAATGTTATAATCTATATGTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | ATTCAGATCTTCAATTTGATGAGGTACCTAAAGGCCTaGAGGGCTTTGCCAATAAGCTTTCCTTCTCAGATA | + |
Preference number: 3 (lower is better) Translates to: IQIFNLMRYLKA*RALPISFPSQI Trigger: TATCTGAGAAGGAAAGCTTATTGGCAAAGCCCTCCAGGCCTTTAGGTACCTCATCAAATTGAAGATCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
3UTR-3UTR CAA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTAAGTCCACAGGCAGTTaGTTTGTAGAAAAGTTGTTC | + |
Preference number: 3 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIKSTGS*FVEKLF Trigger: GAACAACTTTTCTACAAACAAACTGCCTGTGGACTT...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | CATGCATATATGTGTATAGAGAGTATCAATGCCACTTaGGGAGCTAATGGCCTCTCAAGAGCTATAGTCTAT | + |
Preference number: 3 (lower is better) Translates to: HAYMCIESINAT*GANGLSRAIVY Trigger: ATAGACTATAGCTCTTGAGAGGCCATTAGCTCCTCAAGTGGCATTGATACTCTCTATACACATATATGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | CTGAGAAATCGGGTATGGTTTTACTCATCCACTTTCTaGCATGACAATAAATGCCTTAAAACCATGGACTGT | + |
Preference number: 3 (lower is better) Translates to: LRNRVWFYSSTF*HDNKCLKTMDC Trigger: ACAGTCCATGGTTTTAAGGCATTTATTGTCATGGCAGAAAGTGGATGAGTAAAACCATACCCGATTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | CTGACACCCTTCTTCTTCACTTGTTTTCCTGCTCATTaGGTTAGAACAGCCAATAGTAAGTGCTTTGTAAAT | + |
Preference number: 3 (lower is better) Translates to: LTPFFFTCFPAH*VRTANSKCFVN Trigger: ATTTACAAAGCACTTACTATTGGCTGTTCTAACCCAATGAGCAGGAAAACAAGTGAAGAAGAAGGGTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CCA 72 bp | AATGCTGTGACCACACAGCAACGTCATGAAAGTGTTTaGAATTGCCTTACAGGTTTTAGTTTAATCCGTTGT | + |
Preference number: 3 (lower is better) Translates to: NAVTTQQRHESV*NCLTGFSLIRC Trigger: ACAACGGATTAAACTAAAACCTGTAAGGCAATTCCAAACACTTTCATGACGTTGCTGTGTGGTCACAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CAA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGAGGAGTTCTCTTTTTaGAGAGCAATTGTAGTTTCA | + |
Preference number: 3 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIEEFSF*RAIVVS Trigger: TGAAACTACAATTGCTCTCAAAAAAGAGAACTCCTC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR-3UTR CAA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTGAAGACAGGAAAGATTaGTGGGTCTTTATAAGACTA | + |
Preference number: 3 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIEDRKD*WVFIRL Trigger: TAGTCTTATAAAGACCCACAAATCTTTCCTGTCTTC...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | GTGACCACACAGCAACGTCATGAAAGTGTTTGGAATTaGCTTACAGGTTTTAGTTTAATCCGTTGTTTAGAT | + |
Preference number: 3 (lower is better) Translates to: VTTQQRHESVWN*LTGFSLIRCLD Trigger: ATCTAAACAACGGATTAAACTAAAACCTGTAAGGCAATTCCAAACACTTTCATGACGTTGCTGTGTGGTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | CCTGAACCAGTCTTCAATTATCTAGGACAGGCTGTCTaGAAACAACAACAACAACAACAAACCAAACAAAAA | + |
Preference number: 3 (lower is better) Translates to: PEPVFNYLGQAV*KQQQQQQTKQK Trigger: TTTTTGTTTGGTTTGTTGTTGTTGTTGTTGTTTTCAGACAGCCTGTCCTAGATAATTGAAGACTGGTTCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | CTTCAAAGTGAACCGCAGTCATTGTCCTTGGAGCTTTaGGTTCTGAAGTATAATAAGTTTAGTGTTAGAGTT | + |
Preference number: 3 (lower is better) Translates to: LQSEPQSLSLEL*VLKYNKFSVRV Trigger: AACTCTAACACTAAACTTATTATACTTCAGAACTCAAAGCTCCAAGGACAATGACTGCGGTTCACTTTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR TCA 72 bp | GCTGAATTAAGGATTAACATGATTCTTTCTAACCACTaGCACTTTTGCCCATGTTGTGTACCAATGGAACTT | + |
Preference number: 3 (lower is better) Translates to: AELRINMILSNH*HFCPCCVPMEL Trigger: AAGTTCCATTGGTACACAACATGGGCAAAAGTGTCAGTGGTTAGAAAGAATCATGTTAATCCTTAATTCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR GCA 72 bp | AAGAGACTTCAAAAATATCATAGGCTATTACTGTTGTaGTTAGTTGCCTTCCATACCTTGAAAGTAAAGTTC | + |
Preference number: 3 (lower is better) Translates to: KRLQKYHRLLLL*LVAFHTLKVKF Trigger: GAACTTTACTTTCAAGGTATGGAAGGCAACTAAGCACAACAGTAATAGCCTATGATATTTTTGAAGTCTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | CCAGCTGTCCCACACCTCAGACTCTGCTTTCCCACCTaGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGAC | + |
Preference number: 4 (lower is better) Translates to: PAVPHLRLCFPT*EQCPQVSLWPD Trigger: GTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGCAGAGTCTGAGGTGTGGGACAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCCGTCACGAAGAGCCATaGAAGAAAGGAACAGCCACT | + |
Preference number: 4 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTRHEEP*KKGTAT Trigger: AGTGGCTGTTCCTTTCTTTCATGGCTCTTCGTGACG...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | GGGTGTCCAAGAACCCAAGAACCAGATGGCCCCAAACCAGCTCCAGCTGTCCCAATGCCATGTGGTCTGTaGTTTGAGCTTTCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: GCPRTQEPDGPKPAPAVPMPCGL*FELSPQ Trigger: CTGTGGAGAAAGCTCAAACCACAGACCACATGGCAT...TGGGACAGCTGGAGCTGGTTTGGGGCCATCTGGTTCTTGGGTTCTTGGACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
CDS-3UTR CCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCAACTGTGTGCCTGGATaGCAGCATATAGCAATACCC | + |
Preference number: 4 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTNCVPG*QHIAIP Trigger: GGGTATTGCTATATGCTGCCATCCAGGCACACAGTT...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
CDS-3UTR TCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCTCCAAGTCCAACAAGTaGAAGGAAAATTGTCCCCTC | + |
Preference number: 4 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTSKSNK*KENCPL Trigger: GAGGGGACAATTTTCCTTTCACTTGTTGGACTTGGA...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
CDS-3UTR TCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCAAATTGTCCCCTCGATaGGGTCACTCCAAATCATCT | + |
Preference number: 4 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTKLSPR*GHSKSS Trigger: AGATGATTTGGAGTGACCTCATCGAGGGGACAATTT...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
||
CDS-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTATGTGGTCTGTGGTTTaGGCTTTCTCCACAGTGTGG | + |
Preference number: 4 (lower is better) Translates to: ERTRERERERERERERVCMWSVV*AFSTVW Trigger: CCACACTGTGGAGAAAGCTCAAACCACAGACCACAT...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR GCA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCAGAAAGACAAGAACATaGCATGTGGTCTGTGGTTTG | + |
Preference number: 4 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTRKTRT*HVVCGL Trigger: CAAACCACAGACCACATGGCATGTTCTTGTCTTTCT...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | CTCAGCTCTTCCGCAGTTCCCAGTGGTACATGGGTGTCCAAGAACCCAAGAACCATATCCAAAAGAGGATaGGAAAGACAAGAACATGCC | + |
Preference number: 4 (lower is better) Translates to: LSSSAVPSGTWVSKNPRTISKRG*ERQEHA Trigger: GGCATGTTCTTGTCTTTCTCATCCTCTTTTGGATAT...GGTTCTTGGGTTCTTGGACACCCATGTACCACTGGGAACTGCGGAAGAGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATCAGCCCATGAGACCCTaGAAAATGACGTCACGAAGA | + |
Preference number: 4 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYQPMRP*KMTSRR Trigger: TCTTCGTGACGTCATTTTCCAGGGTCTCATGGGCTG...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGATGTAGCTCTGATTTCTaGCCTGGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: VCASYGCLLHMEARKGVRCSSDF*PGIVCR Trigger: TCTGCAAACAATTCCAGGCCAGAAATCAGAGCTACA...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | TTGAGGCTTAGGACAGCACAGAACAGTCCTAATTGCCCAGGTGCATGCTGTAAAAAATTGTCCCCTCGATaGGGTCACTCCAAATCATCT | + |
Preference number: 4 (lower is better) Translates to: LRLRTAQNSPNCPGACCKKLSPR*GHSKSS Trigger: AGATGATTTGGAGTGACCTCATCGAGGGGACAATTT...TTTACAGCATGCACCTGGGCAATTAGGACTGTTCTGTGCTGTCCTAAGCCTCAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTATATCCAAAAGAGGATaGGAAAGACAAGAACATGCC | + |
Preference number: 4 (lower is better) Translates to: ERTRERERERERERERVCISKRG*ERQEHA Trigger: GGCATGTTCTTGTCTTTCTCATCCTCTTTTGGATAT...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | GTCCACAGGCAGTTTGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACCTCAGCAACTGTGTGCCTGGATaGCAGCATATAGCAATACCC | + |
Preference number: 4 (lower is better) Translates to: VHRQFVCRKVVPISPDLSNCVPG*QHIAIP Trigger: GGGTATTGCTATATGCTGCCATCCAGGCACACAGTT...GCTGAGGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | GTCCACAGGCAGTTTGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACCTCAGCAAATTGTCCCCTCGATaGGGTCACTCCAAATCATCT | + |
Preference number: 4 (lower is better) Translates to: VHRQFVCRKVVPISPDLSKLSPR*GHSKSS Trigger: AGATGATTTGGAGTGACCTCATCGAGGGGACAATTT...GCTGAGGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR GCA 90 bp | GAGAGGACAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTTCCAAATCATCTTCATaGTCAGAACTAGGAAAACCT | + |
Preference number: 4 (lower is better) Translates to: ERTRERERERERERERVCSKSSS*SELGKP Trigger: AGGTTTTCCTAGTTCTGAGCATGAAGATGATTTGGA...ACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATTGTAGCTCTGATTTCTaGCCTGGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYCSSDF*PGIVCR Trigger: TCTGCAAACAATTCCAGGCCAGAAATCAGAGCTACA...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | GTCCACAGGCAGTTTGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACCTCAGCTGTAGCTCTGATTTCTaGCCTGGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: VHRQFVCRKVVPISPDLSCSSDF*PGIVCR Trigger: TCTGCAAACAATTCCAGGCCAGAAATCAGAGCTACA...GCTGAGGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | GACCTCAGCCTTGGACTACGGCTATATAGATTTCATTaGTGTGTGACTGCTCTTCAGTTGGACTTGGTGTAT | + |
Preference number: 4 (lower is better) Translates to: DLSLGLRLYRFH*CVTALQLDLVY Trigger: ATACACCAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCCAAGGCTGAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | ACCTGGATGGTGACATATCAGAAGTCCACAGGCAGTTaGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACC | + |
Preference number: 4 (lower is better) Translates to: TWMVTYQKSTGS*FVEKLFPFLLT Trigger: GGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGACTTCTGATATGTCACCATCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | TTCAATTTGATGAGGTACCTAAAGGCCTGGAGGGCTTaGCCAATAAGCTTTCCTTCTCAGATATTCCTCCCT | + |
Preference number: 4 (lower is better) Translates to: FNLMRYLKAWRA*PISFPSQIFLP Trigger: AGGGAGGAATATCTGAGAAGGAAAGCTTATTGGCAAAGCCCTCCAGGCCTTTAGGTACCTCATCAAATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | ACCTGTAGTCATGTAGACTCAATTCAGATCTTCAATTaGATGAGGTACCTAAAGGCCTGGAGGGCTTTGCCA | + |
Preference number: 4 (lower is better) Translates to: TCSHVDSIQIFN*MRYLKAWRALP Trigger: TGGCAAAGCCCTCCAGGCCTTTAGGTACCTCATCAAATTGAAGATCTGAATTGAGTCTACATGACTACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGTCCAAGTCCAACAAGTaGAAGGAAAATTGTCCCCTC | + |
Preference number: 4 (lower is better) Translates to: GLRLYRFHLCVTALQLDLSKSNK*KENCPL Trigger: GAGGGGACAATTTTCCTTTCACTTGTTGGACTTGGA...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | AAATCTAAATACTGGGACTTTTATGAGGGTCATTGTGTGCAGTGTGCTAAAGCAATGTGGTCTGTGGTTTaGGCTTTCTCCACAGTGTGG | + |
Preference number: 4 (lower is better) Translates to: KSKYWDFYEGHCVQCAKAMWSVV*AFSTVW Trigger: CCACACTGTGGAGAAAGCTCAAACCACAGACCACAT...TGCTTTAGCACACTGCACACAATGACCCTCATAAAAGTCCCAGTATTTAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR TCA 90 bp | AAATCTAAATACTGGGACTTTTATGAGGGTCATTGTGTGCAGTGTGCTAAAGCACGTCACGAAGAGCCATaGAAGAAAGGAACAGCCACT | + |
Preference number: 4 (lower is better) Translates to: KSKYWDFYEGHCVQCAKARHEEP*KKGTAT Trigger: AGTGGCTGTTCCTTTCTTTCATGGCTCTTCGTGACG...TGCTTTAGCACACTGCACACAATGACCCTCATAAAAGTCCCAGTATTTAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR GCA 90 bp | GTCCACAGGCAGTTTGTTTGTAGAAAAGTTGTTCCCATTTCTCCTGACCTCAGCTCCAAATCATCTTCATaGTCAGAACTAGGAAAACCT | + |
Preference number: 4 (lower is better) Translates to: VHRQFVCRKVVPISPDLSSKSSS*SELGKP Trigger: AGGTTTTCCTAGTTCTGAGCATGAAGATGATTTGGA...GCTGAGGTCAGGAGAAATGGGAACAACTTTTCTACAAACAAACTGCCTGTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CCA 90 bp | AAATCTAAATACTGGGACTTTTATGAGGGTCATTGTGTGCAGTGTGCTAAAGCAATGCCATGTGGTCTGTaGTTTGAGCTTTCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: KSKYWDFYEGHCVQCAKAMPCGL*FELSPQ Trigger: CTGTGGAGAAAGCTCAAACCACAGACCACATGGCAT...TGCTTTAGCACACTGCACACAATGACCCTCATAAAAGTCCCAGTATTTAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR GCA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGTCCAAATCATCTTCATaGTCAGAACTAGGAAAACCT | + |
Preference number: 4 (lower is better) Translates to: GLRLYRFHLCVTALQLDLSKSSS*SELGKP Trigger: AGGTTTTCCTAGTTCTGAGCATGAAGATGATTTGGA...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR GCA 90 bp | AAATCTAAATACTGGGACTTTTATGAGGGTCATTGTGTGCAGTGTGCTAAAGCAAGAAAGACAAGAACATaGCATGTGGTCTGTGGTTTG | + |
Preference number: 4 (lower is better) Translates to: KSKYWDFYEGHCVQCAKARKTRT*HVVCGL Trigger: CAAACCACAGACCACATGGCATGTTCTTGTCTTTCT...TGCTTTAGCACACTGCACACAATGACCCTCATAAAAGTCCCAGTATTTAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | GTTGCTTTGCCCTATTTAGTACCTCTCAGATACAGCTaGTCTGTGGGATTTCACAGTGATTATCAAAACTAT | + |
Preference number: 4 (lower is better) Translates to: VALPYLVPLRYS*SVGFHSDYQNY Trigger: ATAGTTTTGATAATCACTGTGAAATCCCACAGACAAGCTGTATCTGAGAGGTACTAAATAGGGCAAAGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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3UTR CAA 72 bp | TCCAAGAGACTTCAAAAATATCATAGGCTATTACTGTaGTGCTTAGTTGCCTTCCATACCTTGAAAGTAAAG | + |
Preference number: 4 (lower is better) Translates to: SKRLQKYHRLLL*CLVAFHTLKVK Trigger: CTTTACTTTCAAGGTATGGAAGGCAACTAAGCACAACAGTAATAGCCTATGATATTTTTGAAGTCTCTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | GCTTTCCCACCTTGGAGCAGTGTCCTCAAGTTTCCCTATGGCCTGACACCCACCATTTCTGGCCTGGAATaGTTTGCAGACCCTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: AFPPWSSVLKFPYGLTPTISGLE*FADPEL Trigger: CAGCTCAGGGTCTGCAAACAATTCCAGGCCAGAAAT...GGTGGGTGTCAGGCCATAGGGAAACTTGAGGACACTGCTCCAAGGTGGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATCATGTGGTCTGTGGTTaGAGCTTTCTCCACAGTGTG | + |
Preference number: 5 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYHVVCG*SFLHSV Trigger: CACACTGTGGAGAAAGCTCAAACCACAGACCACATG...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | TCAGTGTTCCTGAGCAGTTTACACAGCCCTGGACTCAGGAACTGTCACTCTTATATTTCTGGCCTGGAATaGTTTGCAGACCCTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: SVFLSSLHSPGLRNCHSYISGLE*FADPEL Trigger: CAGCTCAGGGTCTGCAAACAATTCCAGGCCAGAAAT...ATAAGAGTGACAGTTCCTGAGTCCAGGGCTGTGTAAACTGCTCAGGAACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS TCA 90 bp | CCTCTGTGTAGCTCTGATTTCTGGCCTGGAATTGTTTGCAGACCCTaGGCTGTAAAGATAGAGGACACGGACATGATGTTTGTACAGACG | + |
Preference number: 5 (lower is better) Translates to: PLCSSDFWPGIVCRP*AVKIEDTDMMFVQT Trigger: CGTCTGTACAAACATCATGTCCGTGTCCTCTATCTTTACAGCTCAGGGTCTGCAAACAATTCCAGGCCAGAAATCAGAGCTACACAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057516.2 ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGCATCATATGGGTGCCTGCTGCACATGGAGGCTAGAAAAGGTGTGAGAGGAACACAAATATCCTaGATGATCAGGATAAAAGGG | + |
Preference number: 5 (lower is better) Translates to: VCASYGCLLHMEARKGVRGTQIS*MIRIKG Trigger: CCCTTTTATCCTGATCATCAAGGATATTTGTGTTCC...TCTCACACCTTTTCTAGCCTCCATGTGCAGCAGGCACCCATATGATGCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS CCA 90 bp | AAGAGCCATGAAAGAAAGGAACAGCCACTTAACTGTGTGCCTGGATaGCAGCATATAGCAATACCCAGTAAACATCCCAACTACAGACCT | + |
Preference number: 5 (lower is better) Translates to: KSHERKEQPLNCVPG*QHIAIPSKHPNYRP Trigger: AGGTCTGTAGTTGGGATGTTTACTGGGTATTGCTATATGCTGCCATCCAGGCACACAGTTAAGTGGCTGTTCCTTTCTTTCATGGCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057516.2 ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | GGACTACGGCTATATAGATTTCATTTGTGTGTGACTGCTCTTCAGTTGGACTTGCATGTGGTCTGTGGTTaGAGCTTTCTCCACAGTGTG | + |
Preference number: 5 (lower is better) Translates to: GLRLYRFHLCVTALQLDLHVVCG*SFLHSV Trigger: CACACTGTGGAGAAAGCTCAAACCACAGACCACATG...CAAGTCCAACTGAAGAGCAGTCACACACAAATGAAATCTATATAGCCGTAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | AATGGCCTCTCAAGAGCTATAGTCTATCTGGCAAAAACTTCAGTGTCAGACATTCATGTGGTCTGTGGTTaGAGCTTTCTCCACAGTGTG | + |
Preference number: 5 (lower is better) Translates to: NGLSRAIVYLAKTSVSDIHVVCG*SFLHSV Trigger: CACACTGTGGAGAAAGCTCAAACCACAGACCACATG...AATGTCTGACACTGAAGTTTTTGCCAGATAGACTATAGCTCTTGAGAGGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | TTGAGGCTTAGGACAGCACAGAACAGTCCTAATTGCCCAGGTGCATGCTGTAAAGGAACACAAATATCCTaGATGATCAGGATAAAAGGG | + |
Preference number: 5 (lower is better) Translates to: LRLRTAQNSPNCPGACCKGTQIS*MIRIKG Trigger: CCCTTTTATCCTGATCATCAAGGATATTTGTGTTCC...TTTACAGCATGCACCTGGGCAATTAGGACTGTTCTGTGCTGTCCTAAGCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS-3UTR CAA 90 bp | AAATCTAAATACTGGGACTTTTATGAGGGTCATTGTGTGCAGTGTGCTAAAGCAGGAACACAAATATCCTaGATGATCAGGATAAAAGGG | + |
Preference number: 5 (lower is better) Translates to: KSKYWDFYEGHCVQCAKAGTQIS*MIRIKG Trigger: CCCTTTTATCCTGATCATCAAGGATATTTGTGTTCC...TGCTTTAGCACACTGCACACAATGACCCTCATAAAAGTCCCAGTATTTAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS CCA 72 bp | GAAAGAAAGGAACAGCCACTTAACTGTGTGCCTGGATaGCAGCATATAGCAATACCCAGTAAACATCCCAAC | + |
Preference number: 6 (lower is better) Translates to: ERKEQPLNCVPG*QHIAIPSKHPN Trigger: GTTGGGATGTTTACTGGGTATTGCTATATGCTGCCATCCAGGCACACAGTTAAGTGGCTGTTCCTTTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057516.2 ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |
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CDS TCA 72 bp | CAAGTCCAACAAGTGAAAGGAAAATTGTCCCCTCGATaGGGTCACTCCAAATCATCTTCATGCTCAGAACTA | + |
Preference number: 6 (lower is better) Translates to: QVQQVKGKLSPR*GHSKSSSCSEL Trigger: TAGTTCTGAGCATGAAGATGATTTGGAGTGACCTCATCGAGGGGACAATTTTCCTTTCACTTGTTGGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057516.2 ENSMUST00000227457.2 ENSMUST00000227562.2 ENSMUST00000228303.2 |