Pregenerated sensors for VMN1R192 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000099787Ensembl transcript IDs: ENSMUST00000072632.6, ENSMUST00000238109.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAGCCTTCAGATGAAGTCAGAACTCTCATCTCTGCCTGCACCATaGCTGCCTGGATGCTACCCTGTTCCTGCCTTGAGGATAATGGAC | + |
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Preference number: 1 (lower is better) Translates to: NSLQMKSELSSLPAP*LPGCYPVPALRIMD Trigger: GTCCATTATCCTCAAGGCAGGAACAGGGTAGCATCCAGGCAGGCATGGTGCAGGCAGAGATGAGAGTTCTGACTTCATCTGAAGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 90 bp | TATGCACCACATATGTGTATTGCCCGTAGGGCAGAACACTGGATTTaGATGCTCTGGAAGTGGAATAACAGATGGTGGTCAGCAGCTATA | + |
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Preference number: 1 (lower is better) Translates to: YAPHMCIARRAEHWI*MLWKWNNRWWSAAI Trigger: TATAGCTGCTGACCACCATCTGTTATTCCACTTCCAGAGCATCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATGTGGTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 90 bp | CATGTTTATGCACCACATATGTGTATTGCCCGTAGGGCAGAACACTaGATTTGGATGCTCTGGAAGTGGAATAACAGATGGTGGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: HVYAPHMCIARRAEH*IWMLWKWNNRWWSA Trigger: TGCTGACCACCATCTGTTATTCCACTTCCAGAGCATCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATGTGGTGCATAAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR TCA 90 bp | AATGTTTTAACCCACCAATGTGCCAGTGAGCCCTGGGCTACAGCATaGACCCAAAAAGCATCATTTCTGAGAGGCCATTTACCAGAGATT | + |
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Preference number: 1 (lower is better) Translates to: NVLTHQCASEPWATA*TQKASFLRGHLPEI Trigger: AATCTCTGGTAAATGGCCTCTCAGAAATGATGCTTTTTGGGTTCATGCTGTAGCCCAGGGCTCACTGGCACATTGGTGGGTTAAAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR TCA 90 bp | ACTAGCACTATAAGTTCTAACCCAGTTATAATTGGGCAGCATCATTaGCATGTTATTTTTCATTCTGGAGTGTGCTATGGTGGCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: TSTISSNPVIIGQHH*HVIFHSGVCYGGLA Trigger: AGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACATGTCAATGATGCTGCCCAATTATAACTGGGTTAGAACTTATAGTGCTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 90 bp | TGGGCAGCATCATTGACATGTTATTTTTCATTCTGGAGTGTGCTATaGTGGCCTTGCTTGTTTCACTGTTATTTTCACTCTGTAGTATTA | + |
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Preference number: 1 (lower is better) Translates to: WAASLTCYFSFWSVL*WPCLFHCYFHSVVL Trigger: TAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACATGTCAATGATGCTGCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR TCA 90 bp | ACCAGTCTCAGGTACTCCACAAGAATAATGCATATTCTTAACCACTaGTTCTCACCAGAACTCTTTCTTTTTCTATGTATCATTTTGCGG | + |
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Preference number: 1 (lower is better) Translates to: TSLRYSTRIMHILNH*FSPELFLFLCIILR Trigger: CCGCAAAATGATACATAGAAAAAGAAAGAGTTCTGGTGAGAATCAGTGGTTAAGAATATGCATTATTCTTGTGGAGTACCTGAGACTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR GCA 90 bp | TCATTGACATGTTATTTTTCATTCTGGAGTGTGCTATGGTGGCCTTaGTTGTTTCACTGTTATTTTCACTCTGTAGTATTAGTTCACCTC | + |
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Preference number: 1 (lower is better) Translates to: SLTCYFSFWSVLWWP*LFHCYFHSVVLVHL Trigger: GAGGTGAACTAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACATGTCAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 90 bp | GCAGCATCATTGACATGTTATTTTTCATTCTGGAGTGTGCTATGGTaGCCTTGCTTGTTTCACTGTTATTTTCACTCTGTAGTATTAGTT | + |
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Preference number: 1 (lower is better) Translates to: AASLTCYFSFWSVLW*PCLFHCYFHSVVLV Trigger: AACTAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACATGTCAATGATGCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 90 bp | AATGGACAGTATGATCACAGGCTTATTATCACATTCCTTATCCTTTaGTGGCTACTCTGTATTTCTGTTCATGAAGAAATTAACAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: NGQYDHRLIITFLIL*WLLCISVHEEINKC Trigger: GCACTTGTTAATTTCTTCATGAACAGAAATACAGAGTAGCCACCAAAGGATAAGGAATGTGATAATAAGCCTGTGATCATACTGTCCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTGACGTAGTGCATTGGAGTCCATGCCTGCCTGGATaGTACCCTGTTCCTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GCGDGNGCSLMSDVVHWSPCLPG*YPVPAL Trigger: CAAGGCAGGAACAGGGTAGCATCCAGGCAGGCATGG...ACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTGACGTAGTGCATTGGAGTTGCCTGCACCATGCCTaGCTGGATGCTACCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: GCGDGNGCSLMSDVVHWSCLHHA*LDATLF Trigger: GAACAGGGTAGCATCCAGGCAGGCATGGTGCAGGCA...ACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCACTCTCATCTCTGCCTaGACCATGCCTGCCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: QMRYISSSPPVMLDPGSGTLISA*TMPAWM Trigger: CATCCAGGCAGGCATGGTGCAGGCAGAGATGAGAGT...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCGACTTGCCTTGGCCATaGTGTCTGTTCACAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QMRYISSSPPVMLDPGSGDLPWP*CLFTEA Trigger: TGCTTCTGTGAACAGACACCATGGCCAAGGCAAGTC...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGTGCACCATGCCTGCCTaGATGCTACCCTGTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMCTMPA*MLPCSC Trigger: GCAGGAACAGGGTAGCATCCAGGCAGGCATGGTGCA...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTGACGTAGTGCATTGGAGTTCTGCTCTGAGCTTCTaGAATGCTTCCTGTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: GCGDGNGCSLMSDVVHWSSALSF*NASCHK Trigger: CTTGTGACAGGAAGCATTTCAGAAGCTCAGAGCAGA...ACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCCACCTTCACCCTAGGTaGTTGGAAGTTAGTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QMRYISSSPPVMLDPGSGHLHPR*LEVSLP Trigger: TGGAAGACTAACTTCCAAGCACCTAGGGTGAAGGTG...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTATGCACCACATATGTGTATTGCCCGTAGGGCAGAACACTGGATTTGGATCCACCTGTGATGCTTaGCCCAGGGAGTGGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: MFMHHICVLPVGQNTGFGSTCDA*PREWHS Trigger: AGAATGCCACTCCCTGGGTCAAGCATCACAGGTGGA...TCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATGTGGTGCATAAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACCCACCAATGTGCCAGTaGGCCCTGGGCTACAGCATG | + |
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Preference number: 2 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDPPMCQ*ALGYSM Trigger: CATGCTGTAGCCCAGGGCTCACTGGCACATTGGTGG...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCATTGACCTGGTGGTCTaGATGCAACAGAAGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFIDLVV*MQQKLI Trigger: GATCAGCTTCTGTTGCATGCAGACCACCAGGTCAAT...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCGAGGTGTGGCCTTATTaGAATAGATGTGTCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: QMRYISSSPPVMLDPGSGEVWPY*NRCVTV Trigger: CACAGTGACACATCTATTCCAATAAGGCCACACCTC...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCAAAATCAGCTTCTGTTaGATGCAGACTGCCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFKISFC*MQTARS Trigger: TGACCTGGCAGTCTGCATGCAACAGAAGCTGATTTT...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAATTGTTCATCAGCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAATCTCTGCCTGCACCATaGCTGCCTGGATGCTACCCT | + |
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Preference number: 2 (lower is better) Translates to: ENCSSANRGHSVGFMEQKSLPAP*LPGCYP Trigger: AGGGTAGCATCCAGGCAGGCATGGTGCAGGCAGAGA...TTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGCTGATGAACAATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTGACGTAGTGCATTGGAGTGTGCTATGGTGGCCTTaGTTGTTTCACTGTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: GCGDGNGCSLMSDVVHWSVLWWP*LFHCYF Trigger: AAAATAACAGTGAAACAAGCAAGGCCACCATAGCAC...ACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCTCAGAAGGAGAGGTTaGTTGACAGTTACATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFLRRRG*LTVTFL Trigger: AAGGAATGTAACTGTCAAGCAACCTCTCCTTCTGAG...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCTGCATGCATGTTTATaGACCACATATGTGTATTGC | + |
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Preference number: 2 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFLHACL*TTYVYC Trigger: GCAATACACATATGTGGTGCATAAACATGCATGCAG...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCATATTCTTAACCACTaGTTCTCACCAGAACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFHILNH*FSPELF Trigger: AAAGAGTTCTGGTGAGAATCAGTGGTTAAGAATATG...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCATTCTTCAGGTCAATCTATGGTaGATAGCAAACATTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: RYISSSPPVMLDPGSGILQVNLW*IANIMS Trigger: GGACATAATGTTTGCTATGCACCATAGATTGACCTG...AAGAATGCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATCATTCTTCAGAGGTGTaGCCTTATTGGAATAGATGT | + |
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Preference number: 2 (lower is better) Translates to: ANRGHSVGFMEQKHYTAHHSSEV*PYWNRC Trigger: ACATCTATTCCAATAAGGCCACACCTCTGAAGAATG...ATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATTGTTATTTTTCATTCTaGAGTGTGCTATGGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ANRGHSVGFMEQKHYTAHCYFSF*SVLWWP Trigger: AGGCCACCATAGCACACTCCAGAATGAAAAATAACA...ATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGTGGATTTGGATGCTCTaGAAGTGGAATAACAGATGG | + |
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Preference number: 2 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMWIWML*KWNNRW Trigger: CCATCTGTTATTCCACTTCCAGAGCATCCAAATCCA...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTATGCACCACATATGTGTATTGCCCGTAGGGCAGAACACTGGATTTGGAGGAGTCCTTAGAACTTaGGTTATAAGAGGTTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: MFMHHICVLPVGQNTGFGGVLRT*VIRGFG Trigger: CCCAAAACCTCTTATAACTCAAGTTCTAAGGACTCC...TCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATGTGGTGCATAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACTGGAGTGTGCTATGGTaGCCTTGCTTGTTTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDWSVLW*PCLFHC Trigger: ACAGTGAAACAAGCAAGGCCACCATAGCACACTCCA...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACTTCTGGAGTGTGCTATaGTGGCCTTGCTTGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDFWSVL*WPCLFH Trigger: GTGAAACAAGCAAGGCCACCATAGCACACTCCAGAA...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAATTTTTCCCATTCCAGTGAGATGCATGTATCCCCAGTAGAGCATTCAATCACATGGCAGAGATaGTGGAATAGGAAGATGGTA | + |
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Preference number: 2 (lower is better) Translates to: SANFSHSSEMHVSPVEHSITWQR*WNRKMV Trigger: TACCATCTTCCTATTCCATCATCTCTGCCATGTGAT...TGAATGCTCTACTGGGGATACATGCATCTCACTGGAATGGGAAAAATTTGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACGCAGAACACTGGATTTaGATGCTCTGGAAGTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDAEHWI*MLWKWN Trigger: ATTCCACTTCCAGAGCATCCAAATCCAGTGTTCTGC...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAATTGTTCATCAGCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAAGTCATTTATAAGACTTaGCTTGGCCATGGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ENCSSANRGHSVGFMEQKVIYKT*LGHGVC Trigger: ACAGACACCATGGCCAAGGCAAGTCTTATAAATGAC...TTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGCTGATGAACAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGACTGGTAGTGAGAGATaGAAGATTCAGTGTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMTGSER*KIQCLK Trigger: TTTTAAACACTGAATCTTCCATCTCTCACTACCAGT...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACTGGGTAATAAACCTTTaGCTTCCGAATGAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDWVINL*LPNEQQ Trigger: TTGCTGCTCATTCGGAAGCCAAAGGTTTATTACCCA...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CAA 90 bp | TTGACATGTTATTTTTCATTCTGGAGTGTGCTATGGTGGCCTTGCTaGTTTCACTGTTATTTTCACTCTGTAGTATTAGTTCACCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LTCYFSFWSVLWWPC*FHCYFHSVVLVHLR Trigger: TCTGAGGTGAACTAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACATGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR GCA 72 bp | CAGATGAAGTCAGAACTCTCATCTCTGCCTGCACCATaGCTGCCTGGATGCTACCCTGTTCCTGCCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QMKSELSSLPAP*LPGCYPVPALR Trigger: CCTCAAGGCAGGAACAGGGTAGCATCCAGGCAGGCATGGTGCAGGCAGAGATGAGAGTTCTGACTTCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR GCA 72 bp | CAGCCTTCAGATGAAGTCAGAACTCTCATCTCTGCCTaGACCATGCCTGCCTGGATGCTACCCTGTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: QPSDEVRTLISA*TMPAWMLPCSC Trigger: GCAGGAACAGGGTAGCATCCAGGCAGGCATGGTGCAGGCAGAGATGAGAGTTCTGACTTCATCTGAAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCCAAAATCAGCTTCTGTaGCATGCAGACTGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QMRYISSSPPVMLDPGSGQNQLL*HADCQV Trigger: GACCTGGCAGTCTGCATGCAACAGAAGCTGATTTTG...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR TCA 72 bp | GATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTaGCCCAGGGAGTGGCATTCTTCAGAGGTGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: DEVHFFISTCDA*PREWHSSEVWP Trigger: AGGCCACACCTCTGAAGAATGCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 72 bp | CCCAGGGAGTGGCATTCTTCAGAGGTGTGGCCTTATTaGAATAGATGTGTCACTGTGGGTGTGGTCTTAACA | + |
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Preference number: 3 (lower is better) Translates to: PREWHSSEVWPY*NRCVTVGVVLT Trigger: TGTTAAGACCACACCCACAGTGACACATCTATTCCAATAAGGCCACACCTCTGAAGAATGCCACTCCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR TCA 72 bp | TGCTTGGAAGTTAGTCTTCCACTAACAGCCTTCAGATaGAGTCAGAACTCTCATCTCTGCCTGCACCATGCC | + |
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Preference number: 3 (lower is better) Translates to: CLEVSLPLTAFR*SQNSHLCLHHA Trigger: GGCATGGTGCAGGCAGAGATGAGAGTTCTGACTTCATCTGAAGGCTGTTAGTGGAAGACTAACTTCCAAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
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| 3UTR CCA 72 bp | ATTGCCCGTAGGGCAGAACACTGGATTTGGATGCTCTaGAAGTGGAATAACAGATGGTGGTCAGCAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: IARRAEHWIWML*KWNNRWWSAAI Trigger: TATAGCTGCTGACCACCATCTGTTATTCCACTTCCAGAGCATCCAAATCCAGTGTTCTGCCCTACGGGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | GTTCATCAGCAAACAGAGGACATTCTGTGGGATTCATaGAGCAGAAACACTACACAGCCCATGACACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VHQQTEDILWDS*SRNTTQPMTQP Trigger: TGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGCTGATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATCCTCAGAAGGAGAGGTaGCTTGACAGTTACATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ANRGHSVGFMEQKHYTAHPQKER*LDSYIP Trigger: AGGAATGTAACTGTCAAGCAACCTCTCCTTCTGAGG...ATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTGACGTAGTGCATTGGAGTTATGATGTCCTTATATaGCCAGAGCAGAGAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: GCGDGNGCSLMSDVVHWSYDVLI*PEQRNM Trigger: CATGTTTCTCTGCTCTGGCAATATAAGGACATCATA...ACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR TCA 72 bp | AGGGTGTGGGGATGGAAATGGGTGCTCACTTATGTCTaGCGTAGTGCATTGGAGTCCTTAGAACTTGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RVWGWKWVLTYV*RSALESLELEL Trigger: TAACTCAAGTTCTAAGGACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | GGTCAGCAGCTATATGGGTTCTGGGTAATAAACCTTTaGCTTCCGAATGAGCAGCAAGTGCTCTTACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GQQLYGFWVINL*LPNEQQVLLHY Trigger: GTAGTGTAAGAGCACTTGCTGCTCATTCGGAAGCCAAAGGTTTATTACCCAGAACCCATATAGCTGCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | CATATGTGTATTGCCCGTAGGGCAGAACACTGGATTTaGATGCTCTGGAAGTGGAATAACAGATGGTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HMCIARRAEHWI*MLWKWNNRWWS Trigger: TGACCACCATCTGTTATTCCACTTCCAGAGCATCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR GCA 72 bp | GTGTTTATGTATATAGGGTGTGGGGATGGAAATGGGTaGTCACTTATGTCTGACGTAGTGCATTGGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VFMYIGCGDGNG*SLMSDVVHWSP Trigger: AGGACTCCAATGCACTACGTCAGACATAAGTGAGCACCCATTTCCATCCCCACACCCTATATACATAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGCTATGGTGGCCTTGCTaGTTTCACTGTTATTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMLWWPC*FHCYFH Trigger: GTGAAAATAACAGTGAAACAAGCAAGGCCACCATAG...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGAGAAGGAGAGGTTGCTaGACAGTTACATTCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMRRRGC*TVTFLH Trigger: ATGAAGGAATGTAACTGTCAAGCAACCTCTCCTTCT...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCCCTAAAATGCACATTCCTTATCCTTaGGTGGCTACTCTGTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SWSRNTTQPMTQPQFPKMHIPYP*VATLYF Trigger: GAAATACAGAGTAGCCACCAAAGGATAAGGAATGTG...CATTTTAGGGAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | TGGATTTGGATGCTCTGGAAGTGGAATAACAGATGGTaGTCAGCAGCTATATGGGTTCTGGGTAATAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: WIWMLWKWNNRW*SAAIWVLGNKP Trigger: AGGTTTATTACCCAGAACCCATATAGCTGCTGACCACCATCTGTTATTCCACTTCCAGAGCATCCAAATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR TCA 72 bp | GGATGCTACCCTGTTCCTGCCTTGAGGATAATGGACTaGACCTCTGAACTAGCCCTAATTAAATATTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GCYPVPALRIMD*TSELALIKYCH Trigger: ATGACAATATTTAATTAGGGCTAGTTCAGAGGTTCAGTCCATTATCCTCAAGGCAGGAACAGGGTAGCATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR TCA 72 bp | AGAGATAAAGTCTTGACCTCAGAAGGAGAGGTTGCTTaGCAGTTACATTCCTTCATCGTTGACACTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RDKVLTSEGEVA*QLHSFIVDTSD Trigger: GTCAGAAGTGTCAACGATGAAGGAATGTAACTGTCAAGCAACCTCTCCTTCTGAGGTCAAGACTTTATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | CAGCTTCTGTTGCATGCAGACTGCCAGGTCAATCTATaGTGCATAGCAAACATTATGTCCCCATATCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLLLHADCQVNL*CIANIMSPYLK Trigger: TTTTAGATATGGGGACATAATGTTTGCTATGCACCATAGATTGACCTGGCAGTCTGCATGCAACAGAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR GCA 72 bp | CTTCTGTTGCATGCAGACTGCCAGGTCAATCTATGGTaGATAGCAAACATTATGTCCCCATATCTAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLLHADCQVNLW*IANIMSPYLKF Trigger: GAATTTTAGATATGGGGACATAATGTTTGCTATGCACCATAGATTGACCTGGCAGTCTGCATGCAACAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAATTGTTCATCAGCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAACAGTCCAGAATATTTTaGGGTTTCATGCCAGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ENCSSANRGHSVGFMEQKQSRIF*GFMPVK Trigger: TTTAACTGGCATGAAACCCAAAAATATTCTGGACTG...TTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGCTGATGAACAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | ATAATTGAATACACATCATATTCATATTTCTGGGCCTaGCCTACCTCACCCAGGATGATTTTTATTGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IIEYTSYSYFWA*PTSPRMIFIVP Trigger: TGGAACAATAAAAATCATCCTGGGTGAGGTAGGCCAGGCCCAGAAATATGAATATGATGTGTATTCAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR GCA 72 bp | TGTTATTTTTCATTCTGGAGTGTGCTATGGTGGCCTTaGTTGTTTCACTGTTATTTTCACTCTGTAGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: CYFSFWSVLWWP*LFHCYFHSVVL Trigger: TAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | CCATTTATAATTGAATACACATCATATTCATATTTCTaGGCCTGGCCTACCTCACCCAGGATGATTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: PFIIEYTSYSYF*AWPTSPRMIFI Trigger: AATAAAAATCATCCTGGGTGAGGTAGGCCAGGCCCAGAAATATGAATATGATGTGTATTCAATTATAAATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR TCA 72 bp | AGGTACTCCACAAGAATAATGCATATTCTTAACCACTaGTTCTCACCAGAACTCTTTCTTTTTCTATGTATC | + |
|
Preference number: 3 (lower is better) Translates to: RYSTRIMHILNH*FSPELFLFLCI Trigger: GATACATAGAAAAAGAAAGAGTTCTGGTGAGAATCAGTGGTTAAGAATATGCATTATTCTTGTGGAGTACCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CCA 72 bp | TATGATCACAGGCTTATTATCACATTCCTTATCCTTTaGTGGCTACTCTGTATTTCTGTTCATGAAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: YDHRLIITFLIL*WLLCISVHEEI Trigger: AATTTCTTCATGAACAGAAATACAGAGTAGCCACCAAAGGATAAGGAATGTGATAATAAGCCTGTGATCATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCATGCTGTTTGTGGTTTaGGCTTTGTCCAAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFMLFVV*ALSKGQ Trigger: CTGCCCTTTGGACAAAGCTCAAACCACAAACAGCAT...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCTGGAGCAGAGTTGTTTaGAGACCTGGAGCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFWSRVV*RPGAVK Trigger: CTTTACAGCTCCAGGTCTGCAAACAACTCTGCTCCA...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR TCA 90 bp | TCACCTCAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGCACCTAGGAAGTTTCTaGAATAGAACACTGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPQMRYISSSPPVMLDPGHLGSF*NRTLWL Trigger: TAGCCACAGTGTTCTATTTCAGAAACTTCCTAGGTG...CCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTGAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGACTTGCCTTGGCCATGGTGTCTGTTCACAGAAGCAACCCTAAGACACCAGTTCAAGCTACTGCCTaGTTTGATGTAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRLALAMVSVHRSNPKTPVQATA*FDVGEQ Trigger: TTGCTCTCCTACATCAAAGCAGGCAGTAGCTTGAAC...TGGTGTCTTAGGGTTGCTTCTGTGAACAGACACCATGGCCAAGGCAAGTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CCA 90 bp | TCACCTCAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGTGTAGCTCTGATTTCTaGAGCAGAGTTGTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPQMRYISSSPPVMLDPGCSSDF*SRVVCR Trigger: TCTGCAAACAACTCTGCTCCAGAAATCAGAGCTACA...CCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTGAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCTGTAGAAGGAGAGAATaGAATCTACCCAATAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QMRYISSSPPVMLDPGSGCRRRE*NLPNRR Trigger: TCTTCTATTGGGTAGATTTCATTCTCTCCTTCTACA...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACAGCTACTGCCTGCTTTaGTGTAGGAGAGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDSYCLL*CRRASW Trigger: CCAACTTGCTCTCCTACATCAAAGCAGGCAGTAGCT...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CCA 90 bp | CAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGAGTGGCTTAGAAAAAGCCAAGTaGATGAGAATAAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QMRYISSSPPVMLDPGSGLEKAK*MRIRST Trigger: TGTTGACCTTATTCTCATCCACTTGGCTTTTTCTAA...GCCACTCCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAATTTTTCCCATTCCAGTGAGATGCATGTATCCCCAGTAGAGCATTCATTGGCATGCTGTTTGTaGTTTGAGCTTTGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SANFSHSSEMHVSPVEHSLACCL*FELCPK Trigger: CTTTGGACAAAGCTCAAACCACAAACAGCATGCCAA...TGAATGCTCTACTGGGGATACATGCATCTCACTGGAATGGGAAAAATTTGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CCA 90 bp | GAAAATTGTTCATCAGCAAACAGAGGACATTCTGTGGGATTCATGGAGCAGAAAAGTTGTTTGCAGACCTaGAGCTGTAAAGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENCSSANRGHSVGFMEQKSCLQT*SCKGRG Trigger: TCCTCTACCTTTACAGCTCCAGGTCTGCAAACAACT...TTTCTGCTCCATGAATCCCACAGAATGTCCTCTGTTTGCTGATGAACAATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTCTGGAGGAGTTCTGTAGGGAAAATTGTTCATCAGCAAACAGAGGACATAAAGGGAAGAACTTaGCATGCTGTTTGTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFWRSSVGKIVHQQTEDIKGRT*HAVCGL Trigger: CAAACCACAAACAGCATGCCAAGTTCTTCCCTTTAT...GTCCTCTGTTTGCTGATGAACAATTTTCCCTACAGAACTCCTCCAGAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| 3UTR CAA 72 bp | TATTTTTCATTCTGGAGTGTGCTATGGTGGCCTTGCTaGTTTCACTGTTATTTTCACTCTGTAGTATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSFWSVLWWPC*FHCYFHSVVLV Trigger: AACTAATACTACAGAGTGAAAATAACAGTGAAACAAGCAAGGCCACCATAGCACACTCCAGAATGAAAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGATTCATGGAGCAGAAACACTACACAGCCCATGACACAGCCACAATTCGGCCCCGTGCCATCCTaGCCAGATAAACCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWDSWSRNTTQPMTQPQFGPVPS*PDKPQF Trigger: AAACTGTGGTTTATCTGGCAAGGATGGCACGGGGCC...GAATTGTGGCTGTGTCATGGGCTGTGTAGTGTTTCTGCTCCATGAATCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGACTTGCCTTGGCCATGGTGTCTGTTCACAGAAGCAACCCTAAGACACCAATTTCTGGAGCAGAGTaGTTTGCAGACCTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRLALAMVSVHRSNPKTPISGAE*FADLEL Trigger: CAGCTCCAGGTCTGCAAACAACTCTGCTCCAGAAAT...TGGTGTCTTAGGGTTGCTTCTGTGAACAGACACCATGGCCAAGGCAAGTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | TCACCTCAGATGAGGTACATTTCTTCATCTCCACCTGTGATGCTTGACCCAGGGGAGAGGAAAAACCACTaGATGATGTGTCTTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPQMRYISSSPPVMLDPGERKNH*MMCLDW Trigger: CCAATCAAGACACATCATCAAGTGGTTTTTCCTCTC...CCCTGGGTCAAGCATCACAGGTGGAGATGAAGAAATGTACCTCATCTGAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTTATGCACCACATATGTGTATTGCCCGTAGGGCAGAACACTGGATTTGGACATGCTGTTTGTGGTTaGAGCTTTGTCCAAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MFMHHICVLPVGQNTGFGHAVCG*SFVQRA Trigger: TGCCCTTTGGACAAAGCTCAAACCACAAACAGCATG...TCCAAATCCAGTGTTCTGCCCTACGGGCAATACACATATGTGGTGCATAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAAATTTTTCCCATTCCAGTGAGATGCATGTATCCCCAGTAGAGCATTCACTGGAGCAGAGTTGTTaGCAGACCTGGAGCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SANFSHSSEMHVSPVEHSLEQSC*QTWSCK Trigger: TTTACAGCTCCAGGTCTGCAAACAACTCTGCTCCAG...TGAATGCTCTACTGGGGATACATGCATCTCACTGGAATGGGAAAAATTTGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS TCA 90 bp | ACGAAGAGTCATGAGAGAGAGGAAAAACCACTTGATGATGTGTCTTaGTTGGAGCATATAGCAGTGGCCAATGAATGTTGCAGCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKSHEREEKPLDDVS*LEHIAVANECCSYR Trigger: TCTGTAGCTGCAACATTCATTGGCCACTGCTATATGCTCCAATCAAGACACATCATCAAGTGGTTTTTCCTCTCTCTCATGACTCTTCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS GCA 90 bp | AACATTAACAATCCAAAAGACAAGGATAAAGGGAAGAACTTGGCATaGTGTTTGTGGTTTGAGCTTTGTCCAAAGGGCAGTCCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: NINNPKDKDKGKNLA*CLWFELCPKGSPGT Trigger: AGTCCCAGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTCTTTTGGATTGTTAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS CCA 90 bp | ATGAGAACATTAACAATCCAAAAGACAAGGATAAAGGGAAGAACTTaGCATGCTGTTTGTGGTTTGAGCTTTGTCCAAAGGGCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRTLTIQKTRIKGRT*HAVCGLSFVQRAVL Trigger: CAGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTCTTTTGGATTGTTAATGTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAAATTTTTCCCATTCCAGTGAGATGCATGTATCCCCAGTAGAGCATTCAGATAAAGGGAAGAACTaGGCATGCTGTTTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SANFSHSSEMHVSPVEHSDKGKN*ACCLWF Trigger: AAACCACAAACAGCATGCCAAGTTCTTCCCTTTATC...TGAATGCTCTACTGGGGATACATGCATCTCACTGGAATGGGAAAAATTTGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238109.2 |
||
| CDS CCA 72 bp | GACAAGGATAAAGGGAAGAACTTGGCATGCTGTTTGTaGTTTGAGCTTTGTCCAAAGGGCAGTCCTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: DKDKGKNLACCL*FELCPKGSPGT Trigger: AGTCCCAGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS CAA 72 bp | AGGATAAAGGGAAGAACTTGGCATGCTGTTTGTGGTTaGAGCTTTGTCCAAAGGGCAGTCCTGGGACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RIKGRTWHAVCG*SFVQRAVLGLM Trigger: CATCAGTCCCAGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS CAA 72 bp | AAAGACAAGGATAAAGGGAAGAACTTGGCATGCTGTTaGTGGTTTGAGCTTTGTCCAAAGGGCAGTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KDKDKGKNLACC*WFELCPKGSPG Trigger: CCCAGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS CAA 90 bp | TATGAGAACATTAACAATCCAAAAGACAAGGATAAAGGGAAGAACTaGGCATGCTGTTTGTGGTTTGAGCTTTGTCCAAAGGGCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YENINNPKDKDKGKN*ACCLWFELCPKGSP Trigger: AGGACTGCCCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTCTTTTGGATTGTTAATGTTCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||
| CDS CCA 72 bp | TTAACAATCCAAAAGACAAGGATAAAGGGAAGAACTTaGCATGCTGTTTGTGGTTTGAGCTTTGTCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTIQKTRIKGRT*HAVCGLSFVQR Trigger: CCTTTGGACAAAGCTCAAACCACAAACAGCATGCCAAGTTCTTCCCTTTATCCTTGTCTTTTGGATTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072632.6 ENSMUST00000238109.2 |
||