Pregenerated sensors for VMN1R191 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095916Ensembl transcript IDs: ENSMUST00000072369.2, ENSMUST00000235950.2, ENSMUST00000237107.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGTTTCTGGGGACTTATCAAGTCCACTTTGGACTTCTTCTCTCTaGGAACTATCCTGGGCCAGCGGTCAGGAATCTGGGGTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: YVSGDLSSPLWTSSL*ELSWASGQESGVST Trigger: AGTGGAGACCCCAGATTCCTGACCGCTGGCCCAGGATAGTTCCCAGAGAGAAGAAGTCCAAAGTGGACTTGATAAGTCCCCAGAAACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | GTTCAGAACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTTGGTaGAGTCTTCCAGATCGTATAGGCATCAGGCATGGATGTGCAACA | + |
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Preference number: 1 (lower is better) Translates to: VQNNLSYSSQSEDIW*SLPDRIGIRHGCAT Trigger: TGTTGCACATCCATGCCTGATGCCTATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTTCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | TTGGTTCAGAACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTTaGTGGAGTCTTCCAGATCGTATAGGCATCAGGCATGGATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LVQNNLSYSSQSEDI*WSLPDRIGIRHGCA Trigger: TGCACATCCATGCCTGATGCCTATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTTCTGAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR TCA 90 bp | AATGGAAATCAGGTTGCCAAGTTAGGGATCAAGTGCTTTCCTTGCTaGGACATCTCACTGGACCACTACATTGATTCAGCTTTCCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NGNQVAKLGIKCFPC*DISLDHYIDSAFPA Trigger: AGCAGGGAAAGCTGAATCAATGTAGTGGTCCAGTGAGATGTCTCAGCAAGGAAAGCACTTGATCCCTAACTTGGCAACCTGATTTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | AAGAATGCTTCCTGGCATCCTTCTTCACTGGTTTCCAAGAGTCTCTaGCACATAGTGAGTGCTTTGCAAATAAGTAGAGGAGTCAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: KNASWHPSSLVSKSL*HIVSALQISRGVSD Trigger: ATCACTGACTCCTCTACTTATTTGCAAAGCACTCACTATGTGCCAGAGACTCTTGGAAACCAGTGAAGAAGGATGCCAGGAAGCATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | GGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTaGCATCCTTCTTCACTGGTTTCCAAGAGTCTCTGGCACATAGTG | + |
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Preference number: 1 (lower is better) Translates to: GHVHFVRDLQLKNAS*HPSSLVSKSLWHIV Trigger: CACTATGTGCCAGAGACTCTTGGAAACCAGTGAAGAAGGATGCCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | AGCAAAGAATACTGGTCATGGACTGAAATGAAATCACTCAGATCCTaGTTGTCATGGATACTGTGTTGTTTCAGGAGTTCTGCAGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: SKEYWSWTEMKSLRS*LSWILCCFRSSAVN Trigger: GTTGACTGCAGAACTCCTGAAACAACACAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTATTCTTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | TCTAGGCATACACATTTGTCATGGTGTGTGTGTATGTGTGGAAGCTaGAGGACAATTCTCAGGAATTGGTTCTCATTTTCTACCATATGG | + |
|
Preference number: 1 (lower is better) Translates to: SRHTHLSWCVCMCGS*RTILRNWFSFSTIW Trigger: CCATATGGTAGAAAATGAGAACCAATTCCTGAGAATTGTCCTCCAGCTTCCACACATACACACACACCATGACAAATGTGTATGCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR GCA 90 bp | ATATCATTCAATTTACAAGCCATGGTATTCATGCATCACCTTAGATaGCTCCCTTCCCAGATCCTCTTCCAAGTTCTGTACAGATTGATT | + |
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Preference number: 1 (lower is better) Translates to: ISFNLQAMVFMHHLR*LPSQILFQVLYRLI Trigger: AATCAATCTGTACAGAACTTGGAAGAGGATCTGGGAAGGGAGGCATCTAAGGTGATGCATGAATACCATGGCTTGTAAATTGAATGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | AATTCTCAGGAATTGGTTCTCATTTTCTACCATATGGAACTAGAATaGAAATCAGGTTGCCAAGTTAGGGATCAAGTGCTTTCCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: NSQELVLIFYHMELE*KSGCQVRDQVLSLL Trigger: CAGCAAGGAAAGCACTTGATCCCTAACTTGGCAACCTGATTTCCATTCTAGTTCCATATGGTAGAAAATGAGAACCAATTCCTGAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | TTAGGTAGGGTAGCAGACAGCACATATGCCTTGAGTGGGGTGTTATaGATCATTTTTGTTCTTTATCATCTTGCATGTGGGATCATATTA | + |
|
Preference number: 1 (lower is better) Translates to: LGRVADSTYALSGVL*IIFVLYHLACGIIL Trigger: TAATATGATCCCACATGCAAGATGATAAAGAACAAAAATGATCCATAACACCCCACTCAAGGCATATGTGCTGTCTGCTACCCTACCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR GCA 90 bp | AATCACAATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATaGTCTTGTCCTTGTAATGTTTCGCCAGCAAAACACACTTGGACA | + |
|
Preference number: 1 (lower is better) Translates to: NHNHMSMSLMCVEFI*SCPCNVSPAKHTWT Trigger: TGTCCAAGTGTGTTTTGCTGGCGAAACATTACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATTGTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | AACAGGGAATATGTAGTATTTTCTTTCAGCAAAGAATACTGGTCATaGACTGAAATGAAATCACTCAGATCCTGGTTGTCATGGATACTG | + |
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Preference number: 1 (lower is better) Translates to: NREYVVFSFSKEYWS*TEMKSLRSWLSWIL Trigger: CAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTATTCTTTGCTGAAAGAAAATACTACATATTCCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | TTTGCTTTTAATTTACAAACTTCAGGCAGTTGTAATTTATGTTTCTaGGGACTTATCAAGTCCACTTTGGACTTCTTCTCTCTGGGAACT | + |
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Preference number: 1 (lower is better) Translates to: FAFNLQTSGSCNLCF*GLIKSTLDFFSLGT Trigger: AGTTCCCAGAGAGAAGAAGTCCAAAGTGGACTTGATAAGTCCCCAGAAACATAAATTACAACTGCCTGAAGTTTGTAAATTAAAAGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CCA 90 bp | TACCTTACCTATATTCGACACTTGCAAATGTGTGTCTCTTATCCATaGTACATATGGAAACACTTGAGAAACATGTTGCTTCAAGTATTT | + |
|
Preference number: 1 (lower is better) Translates to: YLTYIRHLQMCVSYP*YIWKHLRNMLLQVF Trigger: AAATACTTGAAGCAACATGTTTCTCAAGTGTTTCCATATGTACCATGGATAAGAGACACACATTTGCAAGTGTCGAATATAGGTAAGGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | ACTATCAGCCCAGATGACGCCACGGGACAGGCAGGGCACAAGGAATGGAAAAATCACTGCTCCAGCCCATaGGATCCTGGAAAAATGACA | + |
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Preference number: 2 (lower is better) Translates to: TISPDDATGQAGHKEWKNHCSSP*DPGKMT Trigger: TGTCATTTTTCCAGGATCTCATGGGCTGGAGCAGTG...ATTTTTCCATTCCTTGTGCCCTGCCTGTCCCGTGGCGTCATCTGGGCTGATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAACAGATGGAGAGCCATaGACCCACTGCTCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPTDGEP*THCSSP Trigger: TGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGGGCCTATaGAAACCTCCAAGCCTGCCCCTGGTGATATACTTCCCCCAACAA | + |
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Preference number: 2 (lower is better) Translates to: ERERERERKREREGL*KPPSLPLVIYFPQQ Trigger: TTGTTGGGGGAAGTATATCACCAGGGGCAGGCTTGGAGGTTTCAATAGGCCCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGACAGATGGAGAGCCATaGACCCACTGCTCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LPGHVHFVRDLQLKNASWTDGEP*THCSSP Trigger: TGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGT...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAAGAGGGAGAACCCTCTaGGTAGCTCAGATTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPRGRTL*VAQISG Trigger: GCCAGAAATCTGAGCTACCCAGAGGGTTCTCCCTCT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAAAAGGAAACAGATCATaGGAGGGAGAACCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPKGNRS*EGEPSG Trigger: CCCAGAGGGTTCTCCCTCTCATGATCTGTTTCCTTT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 90 bp | TTTGGTTCAGAACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTaGGTGGAGTCTTCCAGATCGTATAGGCATCAGGCATGGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: FGSEQSLLLQSVRGH*VESSRSYRHQAWMC Trigger: GCACATCCATGCCTGATGCCTATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTTCTGAACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGGAACATGCCATGGATTaGACTTTCTCCACAATGTGG | + |
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Preference number: 2 (lower is better) Translates to: SISGEVAGLRDMDIPDNQEHAMD*TFSTMW Trigger: CCACATTGTGGAGAAAGTTCAATCCATGGCATGTTC...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGGGATAGTGAACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCCATCAGGCATGGATGTaGAACATAATTCAGGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: DGGIVNIPVYFLEPEPVFHQAWM*NIIQAN Trigger: GTTTGCCTGAATTATGTTGCACATCCATGCCTGATG...GAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTTCACTATCCCACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACAGCCCATGAGATCCTaGAAAAATGACATCACGAAG | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPQPMRS*KNDITK Trigger: CTTCGTGATGTCATTTTTCCAGGATCTCATGGGCTG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGGTACCTTTGAAACACTaGACTACACTCATCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SISGEVAGLRDMDIPDNQVPLKH*TTLIQE Trigger: CTCTTGGATGAGTGTAGTTCAGTGTTTCAAAGGTAC...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGCATGCCTGTGAGTTTTaGGAAAGACAAGCTTATACC | + |
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Preference number: 2 (lower is better) Translates to: SISGEVAGLRDMDIPDNQHACEF*ERQAYT Trigger: GGTATAAGCTTGTCTTTCTCAAAACTCACAGGCATG...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGAAAATTCTAATTAGGTaGCTGCATGCCCTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPGHVHFVRDLQLKNASWKILIR*LHALLH Trigger: GTGCAGGAGGGCATGCAGTCACCTAATTAGAATTTT...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCATGGTGTGTGTGTATGTGTGGAAGCTGGAGGACAATTCTCAGGAATTGGTGAATGGAAATCAGGTTaGCAAGTTAGGGATCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: CHGVCVCVEAGGQFSGIGEWKSG*QVRDQV Trigger: CACTTGATCCCTAACTTGGCAACCTGATTTCCATTC...ACCAATTCCTGAGAATTGTCCTCCAGCTTCCACACATACACACACACCATGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACTTCTTTGCTACAGATaGCTGCTTTTGTTCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPLLCYR*LLLFLD Trigger: GTCCAAGAACAAAAGCAGGCATCTGTAGCAAAGAAG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAAGAAAGGCAGGAACATaGCATGGATTGAACTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPRKAGT*HGLNFL Trigger: GAGAAAGTTCAATCCATGGCATGTTCCTGCCTTTCT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAATGCCAAGCACTTACAACAGGCAGTGAATTAGCTTCACTCCCTGGTCATTCAGAGGACATTTGGTaGAGTCTTCCAGATCGTATA | + |
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Preference number: 2 (lower is better) Translates to: LKCQALTTGSELASLPGHSEDIW*SLPDRI Trigger: TATACGATCTGGAAGACTCCACCAAATGTCCTCTGA...ATGACCAGGGAGTGAAGCTAATTCACTGCCTGTTGTAAGTGCTTGGCATTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAATGCCAAGCACTTACAACAGGCAGTGAATTAGCTTCACTCCCTGGTCATATACTGGTCATGGACTaGAATGAAATCACTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: LKCQALTTGSELASLPGHILVMD*NEITQI Trigger: GATCTGAGTGATTTCATTTCAGTCCATGACCAGTAT...ATGACCAGGGAGTGAAGCTAATTCACTGCCTGTTGTAAGTGCTTGGCATTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGTGGATTAGGGAAATCTaGGAACAGGGAATATGTAGT | + |
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Preference number: 2 (lower is better) Translates to: SISGEVAGLRDMDIPDNQWIREI*EQGICS Trigger: ACTACATATTCCCTGTTCTCAGATTTCCCTAATCCA...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAATGCCAAGCACTTACAACAGGCAGTGAATTAGCTTCACTCCCTGGTCATCCAAATTCCTTTGGATaGTTCCAGTCATTGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LKCQALTTGSELASLPGHPNSFG*FQSLKD Trigger: GTCTTTCAATGACTGGAAGCATCCAAAGGAATTTGG...ATGACCAGGGAGTGAAGCTAATTCACTGCCTGTTGTAAGTGCTTGGCATTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAATGCACAAACTTCTTTaGTACAGATGCCTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPMHKLL*YRCLLL Trigger: CAAAAGCAGGCATCTGTAGCAAAGAAGTTTGTGCAT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACCCATGATGAAAGTGTaGACGTATCTCAAGAATAAG | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPPMMKV*TYLKNK Trigger: CTTATTCTTGAGATACGTGCACACTTTCATCATGGG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGTGGGATAGTGAACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCCAAAATCCCTTCAAATaGGTAGCAAAATGGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: DGGIVNIPVYFLEPEPVFQNPFK*VAKWRM Trigger: CATTCTCCATTTTGCTACCCATTTGAAGGGATTTTG...GAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTTCACTATCCCACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 90 bp | CCTTCTTCACTGGTTTCCAAGAGTCTCTGGCACATAGTGAGTGCTTaGCAAATAAGTAGAGGAGTCAGTGATGATAGAAGAACAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSSLVSKSLWHIVSA*QISRGVSDDRRTVE Trigger: TTCTACTGTTCTTCTATCATCACTGACTCCTCTACTTATTTGCAAAGCACTCACTATGTGCCAGAGACTCTTGGAAACCAGTGAAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR TCA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTGCAGACCTAGAACCGTaGAGAGGAGATGCTTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: NHMSMSLMCVEFICSCPCADLEP*RGDACD Trigger: GTCACAAGCATCTCCTCTTCACGGTTCTAGGTCTGC...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACCTATATTCGACACTTaGAAATGTGTGTCTCTTATC | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPPIFDT*KCVSLI Trigger: GATAAGAGACACACATTTGCAAGTGTCGAATATAGG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAAATGCATCACCTTAGATaGCTCCCTTCCCAGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKMHHLR*LPSQIL Trigger: GAGGATCTGGGAAGGGAGGCATCTAAGGTGATGCAT...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACATATGGAACTAGAATaGAAATCAGGTTGCCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPHMELE*KSGCQV Trigger: AACTTGGCAACCTGATTTCCATTCTAGTTCCATATG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR-3UTR CCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATATAGGAATGGTGGGATaGTGGGATAGTGAACATCCC | + |
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Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYIGMVG*WDSEHP Trigger: GGGATGTTCACTATCCCACCATCCCACCATTCCTAT...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 90 bp | ATGGTGTGTGTGTATGTGTGGAAGCTGGAGGACAATTCTCAGGAATaGGTTCTCATTTTCTACCATATGGAACTAGAATGGAAATCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: MVCVYVWKLEDNSQE*VLIFYHMELEWKSG Trigger: ACCTGATTTCCATTCTAGTTCCATATGGTAGAAAATGAGAACCAATTCCTGAGAATTGTCCTCCAGCTTCCACACATACACACACACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATGGTCATGGACTGAAATaGAATCACTCAGATCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYGHGLK*NHSDPG Trigger: ACCAGGATCTGAGTGATTTCATTTCAGTCCATGACC...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGAAACAAAGTTATCTAGTAGGTGTAGCTTGGAGTGTACCTTTGAAACACTGCCTAATTTTGATTCCTaGCATCTAAGGGAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VETKLSSRCSLECTFETLPNFDS*HLREGW Trigger: CCAGCCTTCCCTTAGATGTCAGGAATCAAAATTAGG...CAGTGTTTCAAAGGTACACTCCAAGCTACACCTACTAGATAACTTTGTTTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATCAGGTTGCCAAGTTAGGGATCAAGTGCTTTCCTTGCTGAGACATCTCACTTGGGTCCCTAATCTTTaGGAGATTAAGTTGATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KSGCQVRDQVLSLLRHLTWVPNL*EIKLIF Trigger: GAAAATCAACTTAATCTCGCAAAGATTAGGGACCCA...AGTGAGATGTCTCAGCAAGGAAAGCACTTGATCCCTAACTTGGCAACCTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGTCCAAATCATCTTCATaGTCAGAACTAGGAAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: LPGHVHFVRDLQLKNASWSKSSS*SELGKS Trigger: GGATTTTCCTAGTTCTGAGCATGAAGATGATTTGGA...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAACAGCAAGTACATTTTaGTTCAGAACAATCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPTASTF*FRTISL Trigger: AAGAGAGATTGTTCTGAACCAAAATGTACTTGCTGT...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCATTTACCAAATTCCTTTaGATGCTTCCAGTCATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPFTKFL*MLPVIE Trigger: TTCAATGACTGGAAGCATCCAAAGGAATTTGGTAAA...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGTTTACCAAATTCCTTTaGATGCTTCCAGTCATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SISGEVAGLRDMDIPDNQFTKFL*MLPVIE Trigger: TTCAATGACTGGAAGCATCCAAAGGAATTTGGTAAA...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CAA 90 bp | AAAGAATACTGGTCATGGACTGAAATGAAATCACTCAGATCCTGGTaGTCATGGATACTGTGTTGTTTCAGGAGTTCTGCAGTCAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: KEYWSWTEMKSLRSW*SWILCCFRSSAVNF Trigger: AAAGTTGACTGCAGAACTCCTGAAACAACACAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTATTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR CAA 90 bp | CTAATGCCAGGGGATAAATCGATGTACCTTACCTATATTCGACACTaGCAAATGTGTGTCTCTTATCCATGGTACATATGGAAACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMPGDKSMYLTYIRH*QMCVSYPWYIWKHL Trigger: CAAGTGTTTCCATATGTACCATGGATAAGAGACACACATTTGCAAGTGTCGAATATAGGTAAGGTACATCGATTTATCCCCTGGCATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCTGGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGCATCAGGCATGGATGTaGAACATAATTCAGGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KAGFVLYVWMLSKVDYMRHQAWM*NIIQAN Trigger: GTTTGCCTGAATTATGTTGCACATCCATGCCTGATG...CCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCCAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATTCAGAGGACATTTGGTaGAGTCTTCCAGATCGTATA | + |
|
Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYSEDIW*SLPDRI Trigger: TATACGATCTGGAAGACTCCACCAAATGTCCTCTGA...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCTGGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGAACCTTGTGAATAACTaGGTCCCTAATCTTTGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: KAGFVLYVWMLSKVDYMRNLVNN*VPNLCE Trigger: CTCGCAAAGATTAGGGACCCAGTTATTCACAAGGTT...CCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCCAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAACAGCCCATGAGATCCTaGAAAAATGACATCACGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKQPMRS*KNDITK Trigger: CTTCGTGATGTCATTTTTCCAGGATCTCATGGGCTG...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CAA 90 bp | CTAAAACTATCTCTTGTTGAAACAAAGTTATCTAGTAGGTGTAGCTaGGAGTGTACCTTTGAAACACTGAACTACACTCATCCAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LKLSLVETKLSSRCS*ECTFETLNYTHPRG Trigger: GCCTCTTGGATGAGTGTAGTTCAGTGTTTCAAAGGTACACTCCAAGCTACACCTACTAGATAACTTTGTTTCAACAAGAGATAGTTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTAAGTGAAATGAAAATTATTCTCTGGATGAGGTCACTCCAAATCATCTTCGGAAGTTCATGCCTGTaGGTTTTGAGAAAGACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SVSEMKIILWMRSLQIIFGSSCL*VLRKTS Trigger: GCTTGTCTTTCTCAAAACTCACAGGCATGAACTTCC...GAAGATGATTTGGAGTGACCTCATCCAGAGAATAATTTTCATTTCACTTACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATTTTGCTACAGATGCCTaGTTTTGTTCTTGGACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYFATDA*FCSWTF Trigger: AAAGGTCCAAGAACAAAAGCAGGCATCTGTAGCAAA...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATCCCATGATGAAAGTGTaGACGTATCTCAAGAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYPMMKV*TYLKNK Trigger: CTTATTCTTGAGATACGTGCACACTTTCATCATGGG...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATATTTTTGTTCTCAGGACCCATGATGAAAGTGTGCACGTATCTCAAGAATGTTAAAATCACTAGCTaGTCTTCCAGAGGATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SIFLFSGPMMKVCTYLKNVKITS*SSRGFR Trigger: CCTGAATCCTCTGGAAGACCAGCTAGTGATTTTAAC...ATTCTTGAGATACGTGCACACTTTCATCATGGGTCCTGAGAACAAAAATATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTGCTGAGACATCTCACTaGACCACTACATTGATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NHMSMSLMCVEFICSCPCAETSH*TTTLIQ Trigger: CTGAATCAATGTAGTGGTCCAGTGAGATGTCTCAGC...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATTGTTTTTGGTTCTGCTaGCATGTTGATGTTGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: DRRTVERTRRKERFVGPYCFWFC*HVDVDD Trigger: ATCATCAACATCAACATGTCAGCAGAACCAAAAACA...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTTCTTGTAATGGCAATTaGAAGGGTGGCTTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: NHMSMSLMCVEFICSCPCSCNGN*KGGFSQ Trigger: TTGTGAGAAGCCACCCTTGCAATTGCCATTACAAGA...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGTCATTCATAGAATTACATAATTGCTATGTAACGTGTTCCTTCCTTTCTGTTAAAATCACTAGCTaGTCTTCCAGAGGATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGSFIELHNCYVTCSFLSVKITS*SSRGFR Trigger: CCTGAATCCTCTGGAAGACCAGCTAGTGATTTTAAC...AGAAAGGAAGGAACACGTTACATAGCAATTATGTAATTCTATGAATGACCCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGTCATTCATAGAATTACATAATTGCTATGTAACGTGTTCCTTCCTTTCTCTAGTAGGTGTAGCTTaGAGTGTACCTTTGAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: QGSFIELHNCYVTCSFLSLVGVA*SVPLKH Trigger: GTGTTTCAAAGGTACACTCCAAGCTACACCTACTAG...AGAAAGGAAGGAACACGTTACATAGCAATTATGTAATTCTATGAATGACCCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAATTTGCGAGATTAAGTTaGTTTTCAGATTCAAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKFARLS*FSDSRW Trigger: CCACCTTGAATCTGAAAATCAACTTAATCTCGCAAA...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATATTTTTGTTCTCAGGACCCATGATGAAAGTGTGCACGTATCTCAAGAATCAAAATCCCTTCAAATaGGTAGCAAAATGGAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: SIFLFSGPMMKVCTYLKNQNPFK*VAKWRM Trigger: CATTCTCCATTTTGCTACCCATTTGAAGGGATTTTG...ATTCTTGAGATACGTGCACACTTTCATCATGGGTCCTGAGAACAAAAATATAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTAAGTTCTGTACAGATTaGTTCCTTAAGAAGCGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NHMSMSLMCVEFICSCPCKFCTD*FLKKRV Trigger: AACACGCTTCTTAAGGAATCAATCTGTACAGAACTT...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATATTTTTGTTCTCAGGACCCATGATGAAAGTGTGCACGTATCTCAAGAATTTTTCAGATTCAAGGTaGTGTTTACTGTTCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SIFLFSGPMMKVCTYLKNFSDSR*CLLFLF Trigger: AAACAGGAACAGTAAACACCACCTTGAATCTGAAAA...ATTCTTGAGATACGTGCACACTTTCATCATGGGTCCTGAGAACAAAAATATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGGCAAAAAAAGAATACTGGTCATaGACTGAAATGAAATCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GFVLYVWMLSKVDYMRAKKEYWS*TEMKSL Trigger: GAGTGATTTCATTTCAGTCCATGACCAGTATTCTTT...TTTTGCCCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCC 36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTATGAAAATTATTCTCTaGATGAGGTCACTCCAAATC | + |
|
Preference number: 2 (lower is better) Translates to: NHMSMSLMCVEFICSCPCMKIIL*MRSLQI Trigger: GATTTGGAGTGACCTCATCCAGAGAATAATTTTCAT...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | AGTCCACTTTGGACTTCTTCTCTCTGGGAACTATCCTaGGCCAGCGGTCAGGAATCTGGGGTCTCCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SPLWTSSLWELS*ASGQESGVSTV Trigger: TACAGTGGAGACCCCAGATTCCTGACCGCTGGCCCAGGATAGTTCCCAGAGAGAAGAAGTCCAAAGTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | GGGGACTTATCAAGTCCACTTTGGACTTCTTCTCTCTaGGAACTATCCTGGGCCAGCGGTCAGGAATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GDLSSPLWTSSL*ELSWASGQESG Trigger: CCCAGATTCCTGACCGCTGGCCCAGGATAGTTCCCAGAGAGAAGAAGTCCAAAGTGGACTTGATAAGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | CCAGATGACGCCACGGGACAGGCAGGGCACAAGGAATaGAAAAATACCCTAGCACATGCGCAGACTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PDDATGQAGHKE*KNTLAHAQTIC Trigger: ACAAATAGTCTGCGCATGTGCTAGGGTATTTTTCCATTCCTTGTGCCCTGCCTGTCCCGTGGCGTCATCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTATCAGCCCAGATGACGCCACGGGACAGGCAGGGCACAAGGAATGGAAAAATGGAACATGCCATGGATaGAACTTTCTCCACAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TISPDDATGQAGHKEWKNGTCHG*NFLHNV Trigger: CACATTGTGGAGAAAGTTCAATCCATGGCATGTTCC...ATTTTTCCATTCCTTGTGCCCTGCCTGTCCCGTGGCGTCATCTGGGCTGATAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | CATGAGAGGGAGAACCCTCTGGGTAGCTCAGATTTCTaGCTTGTAATTGTTTGCAGACCTAGAACCGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HERENPLGSSDF*LVIVCRPRTVK Trigger: CTTCACGGTTCTAGGTCTGCAAACAATTACAAGCCAGAAATCTGAGCTACCCAGAGGGTTCTCCCTCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTATCAGCCCAGATGACGCCACGGGACAGGCAGGGCACAAGGAATGGAAAAATGACAATTCTCAGGAATaGGTTCTCATTTTCTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: TISPDDATGQAGHKEWKNDNSQE*VLIFYH Trigger: ATGGTAGAAAATGAGAACCAATTCCTGAGAATTGTC...ATTTTTCCATTCCTTGTGCCCTGCCTGTCCCGTGGCGTCATCTGGGCTGATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | CAGGTTGCCAAGTTAGGGATCAAGTGCTTTCCTTGCTaGGACATCTCACTGGACCACTACATTGATTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVAKLGIKCFPC*DISLDHYIDSA Trigger: AGCTGAATCAATGTAGTGGTCCAGTGAGATGTCTCAGCAAGGAAAGCACTTGATCCCTAACTTGGCAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | TGGTACCCTGAAATGCCAAGCACTTACAACAGGCAGTaGATTAGCTTCACTCCCTGGTCATGTCCACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WYPEMPSTYNRQ*ISFTPWSCPLC Trigger: ACAAAGTGGACATGACCAGGGAGTGAAGCTAATTCACTGCCTGTTGTAAGTGCTTGGCATTTCAGGGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR GCA 72 bp | CTTGGACAACCAGATCCTTCTACGGCAAAGCTTTATTaGTTACTTCTCAGGAAGACCCCGAACCCGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGQPDPSTAKLY*LLLRKTPNPEN Trigger: ATTTTCCGGGTTCGGGGTCTTCCTGAGAAGTAAGCAATAAAGCTTTGCCGTAGAAGGATCTGGTTGTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | AATCTCTCTTACTCCAGTCAGTCAGAGGACATTTGGTaGAGTCTTCCAGATCGTATAGGCATCAGGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: NLSYSSQSEDIW*SLPDRIGIRHG Trigger: TCCATGCCTGATGCCTATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | GAGAGAGAGGAACAGCCACTTAACTGTGTGCCTGGATaGCAGCATATAGCAATACCCAGTAAACATTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EREEQPLNCVPG*QHIAIPSKHSS Trigger: ACTGGAATGTTTACTGGGTATTGCTATATGCTGCCATCCAGGCACACAGTTAAGTGGCTGTTCCTCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | AGCAAGCTAAACTCCATGATAGGAATGGTGGGATGGTaGGATAGTGAACATCCCTGTCTATTTCCTAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SKLNSMIGMVGW*DSEHPCLFPRA Trigger: GGCTCTAGGAAATAGACAGGGATGTTCACTATCCCACCATCCCACCATTCCTATCATGGAGTTTAGCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | AACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTTaGTGGAGTCTTCCAGATCGTATAGGCATCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NNLSYSSQSEDI*WSLPDRIGIRH Trigger: ATGCCTGATGCCTATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | TGCAGCAAGCTAAACTCCATGATAGGAATGGTGGGATaGTGGGATAGTGAACATCCCTGTCTATTTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSKLNSMIGMVG*WDSEHPCLFPR Trigger: TCTAGGAAATAGACAGGGATGTTCACTATCCCACCATCCCACCATTCCTATCATGGAGTTTAGCTTGCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | TCCTGGCATCCTTCTTCACTGGTTTCCAAGAGTCTCTaGCACATAGTGAGTGCTTTGCAAATAAGTAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWHPSSLVSKSL*HIVSALQISRG Trigger: TCCTCTACTTATTTGCAAAGCACTCACTATGTGCCAGAGACTCTTGGAAACCAGTGAAGAAGGATGCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | GTAATTTATGTTTCTGGGGACTTATCAAGTCCACTTTaGACTTCTTCTCTCTGGGAACTATCCTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VIYVSGDLSSPL*TSSLWELSWAS Trigger: GCTGGCCCAGGATAGTTCCCAGAGAGAAGAAGTCCAAAGTGGACTTGATAAGTCCCCAGAAACATAAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | TGGGATAGTGAACATCCCTGTCTATTTCCTAGAGCCTaGACCAGTCTTCAGTTACCTAGCACCAGCTATATA | + |
|
Preference number: 3 (lower is better) Translates to: WDSEHPCLFPRA*TSLQLPSTSYI Trigger: TATATAGCTGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTTCACTATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCACACAGCAAGTACATTTaGGTTCAGAACAATCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPHSKYI*VQNNLS Trigger: AGAGAGATTGTTCTGAACCAAAATGTACTTGCTGTG...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCAGTTACCTAGCACCAGTATCATTTGAATCCTaGTTTATCCTGACAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: NIPVYFLEPEPVFSYLAPVSFES*FILTRV Trigger: GACCCTTGTCAGGATAAACAAGGATTCAAATGATAC...TGGTGCTAGGTAACTGAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGAACTCTGAATTGACCTaGGCAGTAAGTAACATACAG | + |
|
Preference number: 3 (lower is better) Translates to: SISGEVAGLRDMDIPDNQNSELT*AVSNIQ Trigger: CTGTATGTTACTTACTGCCAAGGTCAATTCAGAGTT...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | TGCTGGAGAAAAGCCTCAGTAGTTAAAATCACTAGCTaGTCTTCCAGAGGATTCAGGTTCAATTCACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CWRKASVVKITS*SSRGFRFNSQQ Trigger: TTGCTGTGAATTGAACCTGAATCCTCTGGAAGACCAGCTAGTGATTTTAACTACTGAGGCTTTTCTCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | TCTTGTCCTTGTAATGTTTCGCCAGCAAAACACACTTaGACAACCAGATCCTTCTACGGCAAAGCTTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SCPCNVSPAKHT*TTRSFYGKALL Trigger: CAATAAAGCTTTGCCGTAGAAGGATCTGGTTGTCCAAGTGTGTTTTGCTGGCGAAACATTACAAGGACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGCACAGCAAGTACATTTaGGTTCAGAACAATCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPGHVHFVRDLQLKNASWHSKYI*VQNNLS Trigger: AGAGAGATTGTTCTGAACCAAAATGTACTTGCTGTG...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAATGCCAAGCACTTACAACAGGCAGTGAATTAGCTTCACTCCCTGGTCATACCTATATTCGACACTaGCAAATGTGTGTCTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LKCQALTTGSELASLPGHTYIRH*QMCVSY Trigger: ATAAGAGACACACATTTGCAAGTGTCGAATATAGGT...ATGACCAGGGAGTGAAGCTAATTCACTGCCTGTTGTAAGTGCTTGGCATTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | AGAAAGTCATATTGTACATTTCTATATTGGGGTAACTaGGTCAAGCCTGCTGAGAACTCTTCATGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RKSYCTFLYWGN*VKPAENSSCRD Trigger: GTCCCTGCATGAAGAGTTCTCAGCAGGCTTGACTCAGTTACCCCAATATAGAAATGTACAATATGACTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR GCA 72 bp | TCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATaGTTCCTGGCATCCTTCTTCACTGGTTTCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCPLCKRPSIKE*FLASFFTGFQE Trigger: CTCTTGGAAACCAGTGAAGAAGGATGCCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | TACTGGTCATGGACTGAAATGAAATCACTCAGATCCTaGTTGTCATGGATACTGTGTTGTTTCAGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YWSWTEMKSLRS*LSWILCCFRSS Trigger: AGAACTCCTGAAACAACACAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | ACACATTTGTCATGGTGTGTGTGTATGTGTGGAAGCTaGAGGACAATTCTCAGGAATTGGTTCTCATTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: THLSWCVCMCGS*RTILRNWFSFS Trigger: AGAAAATGAGAACCAATTCCTGAGAATTGTCCTCCAGCTTCCACACATACACACACACCATGACAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAAACAAAGTTATCTAGTAGGTGTAGCTTGGAGTGTACCTTTGAAACACTGGTCATGGATACTGTGTaGTTTCAGGAGTTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VETKLSSRCSLECTFETLVMDTV*FQEFCS Trigger: ACTGCAGAACTCCTGAAACAACACAGTATCCATGAC...CAGTGTTTCAAAGGTACACTCCAAGCTACACCTACTAGATAACTTTGTTTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAAGTCTCCAACTCTGAATaGACCTTGGCAGTAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKVSNSE*TLAVSN Trigger: GTTACTTACTGCCAAGGTCAATTCAGAGTTGGAGAC...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | GAACTACACTCATCCAAGAGGCCTAATTTTGATTCCTaGCATCTAAGGGAAGGCTGGGTTTGTTTTATATGT | + |
|
Preference number: 3 (lower is better) Translates to: ELHSSKRPNFDS*HLREGWVCFIC Trigger: ACATATAAAACAAACCCAGCCTTCCCTTAGATGTCAGGAATCAAAATTAGGCCTCTTGGATGAGTGTAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR GCA 72 bp | ATTTTCTACCATATGGAACTAGAATGGAAATCAGGTTaGCAAGTTAGGGATCAAGTGCTTTCCTTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IFYHMELEWKSG*QVRDQVLSLLR Trigger: TCTCAGCAAGGAAAGCACTTGATCCCTAACTTGGCAACCTGATTTCCATTCTAGTTCCATATGGTAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTGGTTCTGCTGACATGTaGATGTTGATGATGACAACG | + |
|
Preference number: 3 (lower is better) Translates to: NHMSMSLMCVEFICSCPCGSADM*MLMMTT Trigger: CGTTGTCATCATCAACATCAACATGTCAGCAGAACC...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | AAGTTTCCTCTGGCTTCACTCATATCTTTAACCTTGTaGATAACTGGGTCCCTAATCTTTGCGAGATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KFPLASLISLTL*ITGSLIFARLS Trigger: ACTTAATCTCGCAAAGATTAGGGACCCAGTTATTCACAAGGTTAAAGATATGAGTGAAGCCAGAGGAAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | TTTCTTTCAGCAAAGAATACTGGTCATGGACTGAAATaGAATCACTCAGATCCTGGTTGTCATGGATACTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLSAKNTGHGLK*NHSDPGCHGYC Trigger: ACAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTATTCTTTGCTGAAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR GCA 72 bp | GGGATAAATCGATGTACCTTACCTATATTCGACACTTaGAAATGTGTGTCTCTTATCCATGGTACATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GINRCTLPIFDT*KCVSLIHGTYG Trigger: TCCATATGTACCATGGATAAGAGACACACATTTGCAAGTGTCGAATATAGGTAAGGTACATCGATTTATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR GCA 72 bp | CACATGTCAATGTCTTTAATGTGTGTGGAATTCATATaGTCTTGTCCTTGTAATGTTTCGCCAGCAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: HMSMSLMCVEFI*SCPCNVSPAKH Trigger: GTGTTTTGCTGGCGAAACATTACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAAAAATGCTGCTGTGTATaGTCATGGATTAGGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKKCCCV*SWIREI Trigger: GATTTCCCTAATCCATGACAATACACAGCAGCATTT...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAATTTCCTGGGTTATATTaGAACCCCAAACTGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKFPGLY*NPKLIL Trigger: CAGAATCAGTTTGGGGTTCAAATATAACCCAGGAAA...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | AGTATTTTCTTTCAGCAAAGAATACTGGTCATGGACTaGAATGAAATCACTCAGATCCTGGTTGTCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SIFFQQRILVMD*NEITQILVVMD Trigger: ATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCAGTATTCTTTGCTGAAAGAAAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGGCAAAACTTTGCGAGATTAAGTaGATTTTCAGATTCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GFVLYVWMLSKVDYMRAKLCEIK*IFRFKV Trigger: CACCTTGAATCTGAAAATCAACTTAATCTCGCAAAG...TTTTGCCCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCACATGTCAATGTCTTTAATGTGTGTGGAATTCATATGCTCTTGTCCTTGTTTGTTCTTGGACCTTTaGTTTTTGGTTCTGCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: NHMSMSLMCVEFICSCPCLFLDL*FLVLLT Trigger: TGTCAGCAGAACCAAAAACAAAAGGTCCAAGAACAA...ACAAGGACAAGAGCATATGAATTCCACACACATTAAAGACATTGACATGTGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTAAGTGAAATGAAAATTATTCTCTGGATGAGGTCACTCCAAATCATCTTCTACAGATGCCTGCTTTaGTTCTTGGACCTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVSEMKIILWMRSLQIIFYRCLL*FLDLLF Trigger: AAACAAAAGGTCCAAGAACAAAAGCAGGCATCTGTA...GAAGATGATTTGGAGTGACCTCATCCAGAGAATAATTTTCATTTCACTTACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | AAATGCTGCTGTGTATTGTCATGGATTAGGGAAATCTaGGAACAGGGAATATGTAGTATTTTCTTTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KCCCVLSWIREI*EQGICSIFFQQ Trigger: TTGCTGAAAGAAAATACTACATATTCCCTGTTCTCAGATTTCCCTAATCCATGACAATACACAGCAGCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | TTTGAGAAAGATAAGGAAGTTCATGCCTGTGAGTTTTaGGAAAGACAAGCTTATACCTGTGAGTTTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: FEKDKEVHACEF*ERQAYTCEFSI Trigger: TATGGAAAACTCACAGGTATAAGCTTGTCTTTCTCAAAACTCACAGGCATGAACTTCCTTATCTTTCTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR TCA 72 bp | TGTGTGTCTCTTATCCATGGTACATATGGAAACACTTaGGAAACATGTTGCTTCAAGTATTTCAATATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CVSLIHGTYGNT*ETCCFKYFNIA Trigger: TGCTATATTGAAATACTTGAAGCAACATGTTTCTCAAGTGTTTCCATATGTACCATGGATAAGAGACACACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR CCA 72 bp | ATTTGTGTGTCTTTGTTTCACAACCTAAATATTTCCTaGGTTATATTTGAACCCCAAACTGATTCTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ICVSLFHNLNIS*VIFEPQTDSVL Trigger: AAGCACAGAATCAGTTTGGGGTTCAAATATAACCCAGGAAATATTTAGGTTGTGAAACAAAGACACACAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| CDS-3UTR CCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGGTGCCATGCAGACGTTaGCCTGAGCCTCCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQVPCRR*PEPPPS Trigger: GGATGGAGGAGGCTCAGGCCAACGTCTGCATGGCAC...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGATGCAGACGTTGGCCTaGGCCTCCTCCATCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQMQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCCAACGTCTGCAT...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCATGGATTGAACTTTCTCCACAATGTGGTCCTGGCACTGATGGTGACAGCCTGATGATGATGGCCTaGACCACAGTGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MPWIELSPQCGPGTDGDSLMMMA*TTVRRL Trigger: CAGTCTCCTCACTGTGGTCCAGGCCATCATCATCAG...GCTGTCACCATCAGTGCCAGGACCACATTGTGGAGAAAGTTCAATCCATGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGAGAAGCCCATCCCTGTaGATCAGCACAAGGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQRSPSL*ISTRGL Trigger: TAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCT...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGAGAAGCCCATCCCTGTaGATCAGCACAAGGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPGHVHFVRDLQLKNASWRSPSL*ISTRGL Trigger: TAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCT...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| 3UTR CAA 72 bp | AGAGAGAGAGAAAGAAAGAGAGAGAGAGAGGGCCTATaGAAACCTCCAAGCCTGCCCCTGGTGATATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RERERKREREGL*KPPSLPLVIYF Trigger: GAAGTATATCACCAGGGGCAGGCTTGGAGGTTTCAATAGGCCCTCTCTCTCTCTCTTTCTTTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAACAAAGTTATCTAGTAGGTGTAGCTTGGAGTGTACCTTTGAAACACTGATGCAGACGTTGGCCTaGGCCTCCTCCATCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VETKLSSRCSLECTFETLMQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCCAACGTCTGCAT...CAGTGTTTCAAAGGTACACTCCAAGCTACACCTACTAGATAACTTTGTTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| 3UTR CAA 72 bp | GCTTTCCTTGCTGAGACATCTCACTGGACCACTACATaGATTCAGCTTTCCCTGCTGTTTTCCCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFLAETSHWTTT*IQLSLLFSPLV Trigger: TACCAAAGGGGAAAACAGCAGGGAAAGCTGAATCAATGTAGTGGTCCAGTGAGATGTCTCAGCAAGGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGGATAGTGAACATCCCTGTCTATTTCCTAGAGCCTGAACCAGTCTTCTCTCAAACCAAAAGCTaGTACTGTCTTTGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DGGIVNIPVYFLEPEPVFSQTKS*YCLWQS Trigger: GGATTGCCAAAGACAGTAGCAGCTTTTGGTTTGAGA...GAAGACTGGTTCAGGCTCTAGGAAATAGACAGGGATGTTCACTATCCCACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTAAGTGAAATGAAAATTATTCTCTGGATGAGGTCACTCCAAATCATCTTCGTGCCATGCAGACGTTaGCCTGAGCCTCCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSEMKIILWMRSLQIIFVPCRR*PEPPPS Trigger: GGATGGAGGAGGCTCAGGCCAACGTCTGCATGGCAC...GAAGATGATTTGGAGTGACCTCATCCAGAGAATAATTTTCATTTCACTTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGTCAGACCTGTACTTGTaGTGGAATGGATTAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQSDLYL*WNGLGV Trigger: TACACCTAATCCATTCCATCACAAGTACAGGTCTGA...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTTACTCCAGTCAGTCAGAGGACATTTGGTGGAGTCTTCCAGATCGTATTCTCAAACCAAAAGCTaGTACTGTCTTTGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLQSVRGHLVESSRSYSQTKS*YCLWQS Trigger: GGATTGCCAAAGACAGTAGCAGCTTTTGGTTTGAGA...ATACGATCTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR CCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGAGCTGCTACTGTCTTTaGCAATCCTTTTGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQSCYCL*QSFCKK Trigger: CTTCTTGCAAAAGGATTGCCAAAGACAGTAGCAGCT...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | TCTATCTCAGGGGAAGTAGCTGGCCTTAGGGATATGGACATTCCAGATAATCAGGAATGTCCAAAAGAATaGGAAGAATGGAAGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SISGEVAGLRDMDIPDNQECPKE*EEWKDV Trigger: CACATCCTTCCATTCTTCTCATTCTTTTGGACATTC...CTGATTATCTGGAATGTCCATATCCCTAAGGCCAGCTACTTCCCCTGAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
||
| CDS-3UTR TCA 90 bp | AGAACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTTGGTGGAGTCTTCCAGGGAGAACAATCCATTTaGTTTTCTGACTTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTISLTPVSQRTFGGVFQGEQSI*FSDLVG Trigger: TCCTACCAAGTCAGAAAATCAAATGGATTGTTCTCC...CTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | TGGTCATGGACTGAAATGAAATCACTCAGATCCTGGTaGTCATGGATACTGTGTTGTTTCAGGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSWTEMKSLRSW*SWILCCFRSSA Trigger: TGCAGAACTCCTGAAACAACACAGTATCCATGACAACCAGGATCTGAGTGATTTCATTTCAGTCCATGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGTGCCAACCAGAATCATaGAGAGGAAAACCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGHVHFVRDLQLKNASWCQPES*RGKPFS Trigger: AGAAAATGGTTTTCCTCTTCATGATTCTGGTTGGCA...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR CCA 90 bp | TCAGTAAGTGAAATGAAAATTATTCTCTGGATGAGGTCACTCCAAATCATCTTCCTGATGATGATGGCCTaGACCACAGTGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSEMKIILWMRSLQIIFLMMMA*TTVRRL Trigger: CAGTCTCCTCACTGTGGTCCAGGCCATCATCATCAG...GAAGATGATTTGGAGTGACCTCATCCAGAGAATAATTTTCATTTCACTTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | GTGTATGTGTGGAAGCTGGAGGACAATTCTCAGGAATaGGTTCTCATTTTCTACCATATGGAACTAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VYVWKLEDNSQE*VLIFYHMELEW Trigger: CCATTCTAGTTCCATATGGTAGAAAATGAGAACCAATTCCTGAGAATTGTCCTCCAGCTTCCACACATACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATTCAGACCTGTACTTGTaGTGGAATGGATTAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRRTVERTRRKERFVGPYSDLYL*WNGLGV Trigger: TACACCTAATCCATTCCATCACAAGTACAGGTCTGA...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | GATAGAAGAACAGTAGAACGAACAAGAAGAAAGGAAAGGTTTGTGGGTCCTTATTCTGACTTGGTAGGATaGAATAGCAATAGTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRRTVERTRRKERFVGPYSDLVG*NSNSCR Trigger: GCGACAACTATTGCTATTTCATCCTACCAAGTCAGA...ATAAGGACCCACAAACCTTTCCTTTCTTCTTGTTCGTTCTACTGTTCTTCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | AAGGCTGGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGTCTGACTTGGTAGGATaGAATAGCAATAGTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGFVLYVWMLSKVDYMRSDLVG*NSNSCR Trigger: GCGACAACTATTGCTATTTCATCCTACCAAGTCAGA...CCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCCAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTGGTCATGTCCACTTTGTAAGAGACCTTCAATTAAAGAATGCTTCCTGGTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LPGHVHFVRDLQLKNASWFVKAK*MRIRCM Trigger: CATACACCTTATTCTCATCCACTTGGCTTTTACAAA...CCAGGAAGCATTCTTTAATTGAAGGTCTCTTACAAAGTGGACATGACCAGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | GAAATCACTCAGATCCTGGTTGTCATGGATACTGTGTaGTTTCAGGAGTTCTGCAGTCAACTTTTAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EITQILVVMDTV*FQEFCSQLLSF Trigger: GAAACTTAAAAGTTGACTGCAGAACTCCTGAAACAACACAGTATCCATGACAACCAGGATCTGAGTGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | GGGGATAAATCGATGTACCTTACCTATATTCGACACTaGCAAATGTGTGTCTCTTATCCATGGTACATATGG | + |
|
Preference number: 4 (lower is better) Translates to: GDKSMYLTYIRH*QMCVSYPWYIW Trigger: CCATATGTACCATGGATAAGAGACACACATTTGCAAGTGTCGAATATAGGTAAGGTACATCGATTTATCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | GGACCTTTTGTTTTTGGTTCTGCTGACATGTTGATGTaGATGATGACAACGACAATTGAACATGAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPFVFGSADMLM*MMTTTIEHEHH Trigger: ATGGTGCTCATGTTCAATTGTCGTTGTCATCATCAACATCAACATGTCAGCAGAACCAAAAACAAAAGGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | GTGAATAACTGGGTCCCTAATCTTTGCGAGATTAAGTaGATTTTCAGATTCAAGGTGGTGTTTACTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNNWVPNLCEIK*IFRFKVVFTVP Trigger: AGGAACAGTAAACACCACCTTGAATCTGAAAATCAACTTAATCTCGCAAAGATTAGGGACCCAGTTATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAATGCCAACCAGAATCATaGAGAGGAAAACCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKCQPES*RGKPFS Trigger: AGAAAATGGTTTTCCTCTTCATGATTCTGGTTGGCA...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | TCTCTTGTTGAAACAAAGTTATCTAGTAGGTGTAGCTaGGAGTGTACCTTTGAAACACTGAACTACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVETKLSSRCS*ECTFETLNYTH Trigger: ATGAGTGTAGTTCAGTGTTTCAAAGGTACACTCCAAGCTACACCTACTAGATAACTTTGTTTCAACAAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | AAAGCAACAGTGTGTTATGTAAATGCACAAACTTCTTaGCTACAGATGCCTGCTTTTGTTCTTGGACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KATVCYVNAQTS*LQMPAFVLGPF Trigger: AAAAGGTCCAAGAACAAAAGCAGGCATCTGTAGCAAAGAAGTTTGTGCATTTACATAACACACTGTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR TCA 90 bp | CAAGGGTCATTCATAGAATTACATAATTGCTATGTAACGTGTTCCTTCCTTTCTGGAGAACAATCCATTTaGTTTTCTGACTTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSFIELHNCYVTCSFLSGEQSI*FSDLVG Trigger: TCCTACCAAGTCAGAAAATCAAATGGATTGTTCTCC...AGAAAGGAAGGAACACGTTACATAGCAATTATGTAATTCTATGAATGACCCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS-3UTR CCA 90 bp | TCTATATTTTTGTTCTCAGGACCCATGATGAAAGTGTGCACGTATCTCAAGAATTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SIFLFSGPMMKVCTYLKNFVKAK*MRIRCM Trigger: CATACACCTTATTCTCATCCACTTGGCTTTTACAAA...ATTCTTGAGATACGTGCACACTTTCATCATGGGTCCTGAGAACAAAAATATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | CAAATCATCTTCATGCTCAGAACTAGGAAAATCCTTTaGAGAAAGATAAGGAAGTTCATGCCTGTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QIIFMLRTRKIL*RKIRKFMPVSF Trigger: AAAACTCACAGGCATGAACTTCCTTATCTTTCTCAAAAGGATTTTCCTAGTTCTGAGCATGAAGATGATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| 3UTR CAA 72 bp | ATGTGTGTCTCTTATCCATGGTACATATGGAAACACTaGAGAAACATGTTGCTTCAAGTATTTCAATATAGC | + |
|
Preference number: 4 (lower is better) Translates to: MCVSYPWYIWKH*RNMLLQVFQYS Trigger: GCTATATTGAAATACTTGAAGCAACATGTTTCTCAAGTGTTTCCATATGTACCATGGATAAGAGACACACAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS CCA 90 bp | CACTTTGAGCAACTCTCAGCTCAGGAGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAGGTAGAGGACTTGCTGGTGGTGCTTGTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HFEQLSAQEEFCREA*SSEGRGLAGGACGE Trigger: TTCTCCACAAGCACCACCAGCAAGTCCTCTACCTTCAGAACTCCAAGCTTCTCTACAGAACTCCTCCTGAGCTGAGAGTTGCTCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS GCA 90 bp | AAATACCATGTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGGACCATGAGAGGGAGAACAATCCATTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KYHVATGPSHGTLKH*ISQDHERENNPFDF Trigger: AAAATCAAATGGATTGTTCTCCCTCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTACATGGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR CAA 90 bp | GGTGTTTACTGTTCCTGTTTCACATCTAAGAGCTCCAACATCATGTCGCTCATACAGAAGGAGGACACTTaGAGCAACTCTCAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVYCSCFTSKSSNIMSLIQKEDT*SNSQLR Trigger: CCTGAGCTGAGAGTTGCTCAAAGTGTCCTCCTTCTG...TATGAGCGACATGATGTTGGAGCTCTTAGATGTGAAACAGGAACAGTAAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS GCA 90 bp | ATTAAAGAATTGAATGTCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACGTTGGCCTGAGCCTCCTCCATCCAGATGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKELNVQKNEKNGRM*HADVGLSLLHPDAL Trigger: CAGAGCATCTGGATGGAGGAGGCTCAGGCCAACGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGACATTCAATTCTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS GCA 90 bp | AGCCAGAAGCCCATCCCTGTGAATCAGCACAAGGGGGCTAAAAGATaGGTAAGCAAGGGTCAGACATTCTTGAATATTTACTATCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQKPIPVNQHKGAKR*VSKGQTFLNIYYQG Trigger: TCCTTGATAGTAAATATTCAAGAATGTCTGACCCTTGCTTACGCATCTTTTAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR CAA 90 bp | AGAACAATCTCTCTTACTCCAGTCAGTCAGAGGACATTTGGTGGAGTCTTCCAGAAGCTGCTACTGTCTTaGGCAATCCTTTTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RTISLTPVSQRTFGGVFQKLLLS*AILLQE Trigger: TTCTTGCAAAAGGATTGCCAAAGACAGTAGCAGCTT...CTGGAAGACTCCACCAAATGTCCTCTGACTGACTGGAGTAAGAGAGATTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR CAA 90 bp | ATACCTGGTATTGTAAAATCACTTGTCACTGTGGAACCTGTGTATAAGGAGAAACAGAAGGAGGACACTTaGAGCAACTCTCAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPGIVKSLVTVEPVYKEKQKEDT*SNSQLR Trigger: CCTGAGCTGAGAGTTGCTCAAAGTGTCCTCCTTCTG...TTTCTCCTTATACACAGGTTCCACAGTGACAAGTGATTTTACAATACCAGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS-3UTR CAA 90 bp | AAGGCTGGGTTTGTTTTATATGTGTGGATGCTTTCTAAGGTAGACTATATGAGGAAGCTGCTACTGTCTTaGGCAATCCTTTTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KAGFVLYVWMLSKVDYMRKLLLS*AILLQE Trigger: TTCTTGCAAAAGGATTGCCAAAGACAGTAGCAGCTT...CCTCATATAGTCTACCTTAGAAAGCATCCACACATATAAAACAAACCCAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237107.2 |
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| CDS CCA 72 bp | GGTGGTGCTTGTGGAGAAGAAATACCATGTAGCCACTaGCCCCTCCCATGGCACCCTGAAACACTGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGACGEEIPCSH*PLPWHPETLHL Trigger: GAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTACATGGTATTTCTTCTCCACAAGCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS GCA 72 bp | TTGAATGTCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACGTTGGCCTGAGCCTCCTCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LNVQKNEKNGRM*HADVGLSLLHP Trigger: TGGATGGAGGAGGCTCAGGCCAACGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGACATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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| CDS GCA 72 bp | CCCATCCCTGTGAATCAGCACAAGGGGGCTAAAAGATaGGTAAGCAAGGGTCAGACATTCTTGAATATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PIPVNQHKGAKR*VSKGQTFLNIY Trigger: GTAAATATTCAAGAATGTCTGACCCTTGCTTACGCATCTTTTAGCCCCCTTGTGCTGATTCACAGGGATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072369.2 ENSMUST00000235950.2 ENSMUST00000237107.2 |
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