Pregenerated sensors for VMN1R184 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046130Ensembl transcript IDs: ENSMUST00000057123.7, ENSMUST00000227230.2, ENSMUST00000227232.2, ENSMUST00000227534.2, ENSMUST00000227790.2, ENSMUST00000228145.2, ENSMUST00000228369.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGCCTGTGGGGCAGTGGACACACACCCTCAAATTCCCCTACACTaGGGCATCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTA | + |
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Preference number: 1 (lower is better) Translates to: HACGAVDTHPQIPLH*GIKPSQDQGPLLPL Trigger: TAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATTTGAGGGTGTGTGTCCACTGCCCCACAGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR TCA 90 bp | TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTaGGACAGGGTTTCTCTGTGTAGTCCTGGATGTCCTGGAACTCAC | + |
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Preference number: 1 (lower is better) Translates to: CCCCCCCCCCCCCCF*DRVSLCSPGCPGTH Trigger: GTGAGTTCCAGGACATCCAGGACTACACAGAGAAACCCTGTCTCAAAAACAACAACAACAACAACAACAACAACAACAACAACAACAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR TCA 90 bp | TTCCTAAGAGAAATGAATTCTGAACTGGACCTCAGCAATAATCATTaGCAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGG | + |
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Preference number: 1 (lower is better) Translates to: FLREMNSELDLSNNH*QHERHKKGTLFGHW Trigger: CCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAATGATTATTGCTGAGGTCCAGTTCAGAATTCATTTCTCTTAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR CCA 90 bp | ACCTCAAAGAATAAGTTTGGCATTGTTCCTTCCATTTCCATTTTGTaGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGTAGAATT | + |
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Preference number: 1 (lower is better) Translates to: TSKNKFGIVPSISIL*KSLRSTLPGKYGRI Trigger: AATTCTACCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAAGGAACAATGCCAAACTTATTCTTTGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACACGCCTGTGGGGCAGTaGACACACACCCTCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYTPVGQ*THTLKF Trigger: GAATTTGAGGGTGTGTGTCCACTGCCCCACAGGCGT...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAACGCCTGTGGGGCAGTaGACACACACCCTCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTTPVGQ*THTLKF Trigger: GAATTTGAGGGTGTGTGTCCACTGCCCCACAGGCGT...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCAAATTCCCCTACACTaGGGCATCAAGCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYQIPLH*GIKPSQ Trigger: CTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATTTG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACAAATTCCCCTACACTaGGGCATCAAGCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVQIPLH*GIKPSQ Trigger: CTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATTTG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTCAGCAATAATCATTaGCAGCATGAAAGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLSNNH*QHERHK Trigger: CTTGTGCCTTTCATGCTGTCAATGATTATTGCTGAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTCAGCAATAATCATTaGCAGCATGAAAGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVLSNNH*QHERHK Trigger: CTTGTGCCTTTCATGCTGTCAATGATTATTGCTGAG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTCTGTAGATCAGACTaGCCTCAAACTCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLCRSD*PQTQKF Trigger: GAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATCAGCAAGAGGGAATTaGCAAAAGCCAGAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVSARGN*QKPEIL Trigger: CAAAATCTCTGGCTTTTGCCAATTCCCTCTTGCTGA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTTTCCAGAATTCAATaGAAATTAAGCCTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLSRIQ*KLSLTP Trigger: GGGTGTGAGGCTTAATTTTCATTGAATTCTGGAAAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTGCACCAAAACTATATaGCCCTGGGCATTTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYCTKTI*PWAFLV Trigger: AACTAAAAATGCCCAGGGTCATATAGTTTTGGTGCA...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACATCAGCAAGAGGGAATTaGCAAAAGCCAGAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTSARGN*QKPEIL Trigger: CAAAATCTCTGGCTTTTGCCAATTCCCTCTTGCTGA...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAACACCCAAATTTATATaGCACAATGAAAGCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVTPKFI*HNESRL Trigger: AAGCCTGCTTTCATTGTGTCATATAAATTTGGGTGT...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACATGCACCAAAACTATATaGCCCTGGGCATTTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTCTKTI*PWAFLV Trigger: AACTAAAAATGCCCAGGGTCATATAGTTTTGGTGCA...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAGTATCAGAGAGACTATaGCCTCAAAGAATAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVVSERL*PQRISL Trigger: CAAACTTATTCTTTGAGGTCATAGTCTCTCTGATAC...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCATTTTGTACCTCCTTaGTCTCCTTTAGTTGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYHFVPP*SPLVVL Trigger: TAAGACAACTAAAGGAGATCAAGGAGGTACAAAATG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACGTAAATGAACCAATTTaGTCTCCATTCAGTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYVNEPI*SPFSLM Trigger: CATCAGACTGAATGGAGAGCAAATTGGTTCATTTAC...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTCCATTTCCATTTTGTaGAAGAGTTTGAGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYSISIL*KSLRST Trigger: AGTACTCCTCAAACTCTTCCACAAAATGGAAATGGA...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATCCATTTCCATTTTGTaGAAGAGTTTGAGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVSISIL*KSLRST Trigger: AGTACTCCTCAAACTCTTCCACAAAATGGAAATGGA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATGTTTAGTCTTTGTTTaGCTTTGGTATCAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVCLVFV*LWYQRD Trigger: GTCTCTCTGATACCAAAGCCAAACAAAGACTAAACA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAACACCCAAATTTATATaGCACAATGAAAGCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTTPKFI*HNESRL Trigger: AAGCCTGCTTTCATTGTGTCATATAAATTTGGGTGT...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAGTATCAGAGAGACTATaGCCTCAAAGAATAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTVSERL*PQRISL Trigger: CAAACTTATTCTTTGAGGTCATAGTCTCTCTGATAC...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATAAAATTCACCTGCCTCTaGCTCCCAAGTGCTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: IQPADKTLLLILMLDKVIKFTCL*LPSAQI Trigger: AATCTGAGCACTTGGGAGGCAGAGGCAGGTGAATTT...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACATGTTTAGTCTTTGTTTaGCTTTGGTATCAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTCLVFV*LWYQRD Trigger: GTCTCTCTGATACCAAAGCCAAACAAAGACTAAACA...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTAAAATTCACCTGCCTCTaGCTCCCAAGTGCTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLKFTCL*LPSAQI Trigger: AATCTGAGCACTTGGGAGGCAGAGGCAGGTGAATTT...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGCTCTGTAGATCAGACTaGCCTCAAACTCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWLCRSD*PQTQKF Trigger: GAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAG...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGCTTTCCAGAATTCAATaGAAATTAAGCCTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWLSRIQ*KLSLTP Trigger: GGGTGTGAGGCTTAATTTTCATTGAATTCTGGAAAG...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGTGCACCAAAACTATATaGCCCTGGGCATTTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWCTKTI*PWAFLV Trigger: AACTAAAAATGCCCAGGGTCATATAGTTTTGGTGCA...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTAAAATTCACCTGCCTCTaGCTCCCAAGTGCTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: PNLYDTMKAGLRGKFIALKFTCL*LPSAQI Trigger: AATCTGAGCACTTGGGAGGCAGAGGCAGGTGAATTT...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGCTCTGTAGATCAGACTaGCCTCAAACTCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: EPICSPFSLMLAIDLMYVLCRSD*PQTQKF Trigger: GAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAG...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGTCTCTCAATCTTCTATaGCTCTTGTTTGCCTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWSLNLL*LLFAFL Trigger: TAGGAAGGCAAACAAGAGCCATAGAAGATTGAGAGA...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGTCAGCAAGAGGGAATTaGCAAAAGCCAGAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: EPICSPFSLMLAIDLMYVSARGN*QKPEIL Trigger: CAAAATCTCTGGCTTTTGCCAATTCCCTCTTGCTGA...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR CAA 90 bp | TTGCCAAAAGTAATCAATGTTTACTCTCTCAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAAATGAATTCTGAACTGGACCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPKVINVYSLNLLWL*FAFLREMNSELDLS Trigger: GCTGAGGTCCAGTTCAGAATTCATTTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATTGAGAGAGTAAACATTGATTACTTTTGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR CAA 90 bp | AATAAGTTTGGCATTGTTCCTTCCATTTCCATTTTGTGGAAGAGTTaGAGGAGTACTCTTCCTGGAAAGTATGGTAGAATTCTGCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: NKFGIVPSISILWKS*RSTLPGKYGRILHQ Trigger: TTGGTGCAGAATTCTACCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAAGGAACAATGCCAAACTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR CAA 90 bp | ATGACCTCAAAGAATAAGTTTGGCATTGTTCCTTCCATTTCCATTTaGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: MTSKNKFGIVPSISI*WKSLRSTLPGKYGR Trigger: TCTACCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAAGGAACAATGCCAAACTTATTCTTTGAGGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTCTCAGCAATAATCATTaGCAGCATGAAAGGCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTLSNNH*QHERHK Trigger: CTTGTGCCTTTCATGCTGTCAATGATTATTGCTGAG...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTCTCTGTAGATCAGACTaGCCTCAAACTCAGAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTLCRSD*PQTQKF Trigger: GAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAG...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTTCAGCAAGAGGGAATTaGCAAAAGCCAGAGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTSARGN*QKPEIL Trigger: CAAAATCTCTGGCTTTTGCCAATTCCCTCTTGCTGA...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGTGTTTAGTCTTTGTTTaGCTTTGGTATCAGAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EPICSPFSLMLAIDLMYVCLVFV*LWYQRD Trigger: GTCTCTCTGATACCAAAGCCAAACAAAGACTAAACA...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTTCTATGGCTCTTGTTTaGCTTCCTAAGAGAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTSMALV*LPKRNE Trigger: TTCATTTCTCTTAGGAAGGCAAACAAGAGCCATAGA...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTATCTATGGCTCTTGTTTaGCTTCCTAAGAGAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: PNLYDTMKAGLRGKFIALSMALV*LPKRNE Trigger: TTCATTTCTCTTAGGAAGGCAAACAAGAGCCATAGA...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR CCA 72 bp | GGGGCAGTGGACACACACCCTCAAATTCCCCTACACTaGGGCATCAAGCCTTCACAGGACCAAGGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GAVDTHPQIPLH*GIKPSQDQGPL Trigger: GAGAGGCCCTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATTTGAGGGTGTGTGTCCACTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR GCA 72 bp | TCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTaGCTCCCAAGTGCTCAGATTAAAGGCTTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SDWPQTQKFTCL*LPSAQIKGLCH Trigger: GTGGCACAAGCCTTTAATCTGAGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTACTCATTCTGATGTaGGACAAGGTGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLLILM*DKVIPP Trigger: TGGTGGTATCACCTTGTCCAACATCAGAATGAGTAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTACTCATTCTGATGTaGGACAAGGTGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVLLILM*DKVIPP Trigger: TGGTGGTATCACCTTGTCCAACATCAGAATGAGTAG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACAAAAGCCAGAGATTTaGGGCCACAGAATAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVQKPEI*GHRIAK Trigger: CTTTGCTATTCTGTGGCCCAAAATCTCTGGCTTTTG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR GCA 72 bp | TGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTaGCTCTGCCTCCCAAGTGCTCAGATTAAAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CRSDWPQTQKFT*LCLPSAQIKGL Trigger: CAAGCCTTTAATCTGAGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTTTAGTTGTCTTATaGCTCTGGCTAGAGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVPLVVL*LWLELQ Trigger: TTGAAGCTCTAGCCAGAGCAATAAGACAACTAAAGG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVNLLWL*FAFLRE Trigger: TTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATT...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAATTTTGTGGAAGAGTTaGAGGAGTACTCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTILWKS*RSTLPG Trigger: TCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAAT...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACACCTTCCATTTCCATTTaGTGGAAGAGTTTGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTPSISI*WKSLRS Trigger: ACTCCTCAAACTCTTCCACAAAATGGAAATGGAAGG...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTTGATGTATGTGCTTaGATTATGTGTCCTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLDVCA*IMCPLS Trigger: GGATAGAGGACACATAATCAAAGCACATACATCAAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTTGATGTATGTGCTTaGATTATGTGTCCTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVLDVCA*IMCPLS Trigger: GGATAGAGGACACATAATCAAAGCACATACATCAAG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATTCTTCTTTTCCATTTaGTACCTCCTTGATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVFFFSI*YLLDLL Trigger: AAGGAGATCAAGGAGGTACAAAATGGAAAAGAAGAA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTTCTTCTTTTCCATTTaGTACCTCCTTGATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYFFFSI*YLLDLL Trigger: AAGGAGATCAAGGAGGTACAAAATGGAAAAGAAGAA...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACACAGCCAGCTTATATTTaGCATAAAAGAAGGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTQPAYI*HKRRLL Trigger: CAGTAGCCTTCTTTTATGCAAAATATAAGCTGGCTG...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR CCA 72 bp | TTTCTTAATCCACTGCTGCTATCAGCAAGAGGGAATTaGCAAAAGCCAGAGATTTTGGGCCACAGAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLNPLLLSARGN*QKPEILGHRIA Trigger: TGCTATTCTGTGGCCCAAAATCTCTGGCTTTTGCCAATTCCCTCTTGCTGATAGCAGCAGTGGATTAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTACTACTCATTCTGATGTaGGACAAGGTGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLLLILM*DKVIPP Trigger: TGGTGGTATCACCTTGTCCAACATCAGAATGAGTAG...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGCAAAAGCCAGAGATTTaGGGCCACAGAATAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWQKPEI*GHRIAK Trigger: CTTTGCTATTCTGTGGCCCAAAATCTCTGGCTTTTG...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWNLLWL*FAFLRE Trigger: TTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATT...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGATTTTGTGGAAGAGTTaGAGGAGTACTCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EPICSPFSLMLAIDLMYVILWKS*RSTLPG Trigger: TCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAAT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR TCA 72 bp | TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTaGGACAGGGTTTCTCTGTGTAGTCCTGGATGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CCCCCCCCCCCF*DRVSLCSPGCP Trigger: AGGACATCCAGGACTACACAGAGAAACCCTGTCTCAAAAACAACAACAACAACAACAACAACAACAACAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTACTACTCATTCTGATGTaGGACAAGGTGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PNLYDTMKAGLRGKFIALLLILM*DKVIPP Trigger: TGGTGGTATCACCTTGTCCAACATCAGAATGAGTAG...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTCTACTCATTCTGATGTaGGACAAGGTGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTLLILM*DKVIPP Trigger: TGGTGGTATCACCTTGTCCAACATCAGAATGAGTAG...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPICSPFSLMLAIDLMYVNLLWL*FAFLRE Trigger: TTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR TCA 72 bp | GAAATGAATTCTGAACTGGACCTCAGCAATAATCATTaGCAGCATGAAAGGCACAAGAAGGGCACATTATTT | + |
|
Preference number: 3 (lower is better) Translates to: EMNSELDLSNNH*QHERHKKGTLF Trigger: AAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAATGATTATTGCTGAGGTCCAGTTCAGAATTCATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR TCA 72 bp | TTTAGTCTTTGTTTGGCTTTGGTATCAGAGAGACTATaGCCTCAAAGAATAAGTTTGGCATTGTTCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSLCLALVSERL*PQRISLALFLP Trigger: TGGAAGGAACAATGCCAAACTTATTCTTTGAGGTCATAGTCTCTCTGATACCAAAGCCAAACAAAGACTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR TCA 72 bp | ACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTaGCTTGATGTATGTGCTTTGATTATGTGTCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TNLLSIQSDVSY*LDVCALIMCPL Trigger: TAGAGGACACATAATCAAAGCACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTAAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNLYDTMKAGLRGKFIALNLLWL*FAFLRE Trigger: TTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATT...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAAGGATTTTCTGGGGCTaGTGGTCATGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVRIFWG*WSWPEK Trigger: TTTTTCAGGCCATGACCATCAGCCCCAGAAAATCCT...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACAGGATTTTCTGGGGCTaGTGGTCATGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYRIFWG*WSWPEK Trigger: TTTTTCAGGCCATGACCATCAGCCCCAGAAAATCCT...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACCTCCTGAAGAAAGAATaGACAAGGAATTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYLLKKE*TRNWLP Trigger: TGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAG...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCCTCCTGAAGAAAGAATaGACAAGGAATTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASLLKKE*TRNWLP Trigger: TGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAG...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTATGTGGGGCACTCCTaGAGAAAGAATGAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYYVGHS*RKNEQG Trigger: TCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATA...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACACTCCTGAAGAAAGAATaGACAAGGAATTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTLLKKE*TRNWLP Trigger: TGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAG...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVQSPIM*GTPEER Trigger: TCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACTTTGTGATAATAAAGTaGTTCTGGCAGCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYFVIIK*FWQPDS Trigger: GGAATCTGGCTGCCAGAATCACTTTATTATCACAAA...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCTTTGTGATAATAAAGTaGTTCTGGCAGCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASFVIIK*FWQPDS Trigger: GGAATCTGGCTGCCAGAATCACTTTATTATCACAAA...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACACAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTQSPIM*GTPEER Trigger: TCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTG...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCTGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACAAAGAGAAATGATGTaGTTTATGTTCATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVQREMM*FMFISH Trigger: GTGGCTGATGAACATAAATCACATCATTTCTCTTTG...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCAAATGTATTAGCATGTaGAAGATCCACATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASKCISM*KIHMRE Trigger: TTCCCTCATGTGGATCTTGCACATGCTAATACATTT...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAAGGGAACATTACGAATaGTGCATAGAGAAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVREHYE*CIEKFS Trigger: ACTGAATTTCTCTATGCAGCATTCGTAATGTTCCCT...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCTGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASCTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTATGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVCTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATAAGGATTTTCTGGGGCTaGTGGTCATGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIRIFWG*WSWPEK Trigger: TTTTTCAGGCCATGACCATCAGCCCCAGAAAATCCT...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACATGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTAGAACATTACGAATGCTaGATAGAGAAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLLPYFYQGVSPSTHVEHYEC*IEKFSD Trigger: ATCACTGAATTTCTCTATGCAGCATTCGTAATGTTC...TACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAAGGGAACATTACGAATaGTGCATAGAGAAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTREHYE*CIEKFS Trigger: ACTGAATTTCTCTATGCAGCATTCGTAATGTTCCCT...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | CACTCTGTAGATCAGACTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCATGTGTAGAACCCTCTaGTTGTGTTTAAATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQTGLKLRNSPASASMCRTL*LCLNRM Trigger: CATTCTATTTAAACACAAGCAGAGGGTTCTACACAT...GGAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGTCTGATCTACAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | TTCCATCCCTTCTCCCCTACTTCTATCAGGGTGTTTCCCCATCTACCCACGTACATGTGTAGAACCCTCTaGTTGTGTTTAAATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FHPFSPTSIRVFPHLPTYMCRTL*LCLNRM Trigger: CATTCTATTTAAACACAAGCAGAGGGTTCTACACAT...GTACGTGGGTAGATGGGGAAACACCCTGATAGAAGTAGGGGAGAAGGGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATATATGTGGGGCACTCCTaGAGAAAGAATGAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIYVGHS*RKNEQG Trigger: TCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATA...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTAAGGATTTTCTGGGGCTaGTGGTCATGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLRIFWG*WSWPEK Trigger: TTTTTCAGGCCATGACCATCAGCCCCAGAAAATCCT...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | CACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACAGAACATTACGAATGCTaGATAGAGAAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTFRWCHSLVQGYTNHHTEHYEC*IEKFSD Trigger: ATCACTGAATTTCTCTATGCAGCATTCGTAATGTTC...TGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTACTCCTGAAGAAAGAATaGACAAGGAATTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLLLKKE*TRNWLP Trigger: TGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAG...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTATATGTGGGGCACTCCTaGAGAAAGAATGAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLYVGHS*RKNEQG Trigger: TCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATA...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGAGGATTTTCTGGGGCTaGTGGTCATGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVRIFWG*WSWPEK Trigger: TTTTTCAGGCCATGACCATCAGCCCCAGAAAATCCT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATACAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIQSPIM*GTPEER Trigger: TCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTG...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGCTCCTGAAGAAAGAATaGACAAGGAATTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVLLKKE*TRNWLP Trigger: TGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAG...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATAAAATGTATTAGCATGTaGAAGATCCACATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIKCISM*KIHMRE Trigger: TTCCCTCATGTGGATCTTGCACATGCTAATACATTT...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATATGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVICTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTAACAGCTTTGACTTTATaGTCCTTCCAACAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLTALTL*SFQQDF Trigger: AAAATCCTGTTGGAAGGATCATAAAGTCAAAGCTGT...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGACAGCTTTGACTTTATaGTCCTTCCAACAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWTALTL*SFQQDF Trigger: AAAATCCTGTTGGAAGGATCATAAAGTCAAAGCTGT...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTATGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGCAAAGAGAAATGATGTaGTTTATGTTCATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWQREMM*FMFISH Trigger: GTGGCTGATGAACATAAATCACATCATTTCTCTTTG...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGAAATGTATTAGCATGTaGAAGATCCACATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWKCISM*KIHMRE Trigger: TTCCCTCATGTGGATCTTGCACATGCTAATACATTT...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATAGAACATTACGAATGCTaGATAGAGAAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIEHYEC*IEKFSD Trigger: ATCACTGAATTTCTCTATGCAGCATTCGTAATGTTC...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATAATGTGTAGAACCCTCTaGTTGTGTTTAAATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: IQPADKTLLLILMLDKVIMCRTL*LCLNRM Trigger: CATTCTATTTAAACACAAGCAGAGGGTTCTACACAT...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGTGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWCTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGACAGCTTTGACTTTATaGTCCTTCCAACAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVTALTL*SFQQDF Trigger: AAAATCCTGTTGGAAGGATCATAAAGTCAAAGCTGT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGTGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGCAAAGAGAAATGATGTaGTTTATGTTCATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVQREMM*FMFISH Trigger: GTGGCTGATGAACATAAATCACATCATTTCTCTTTG...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGAAATGTATTAGCATGTaGAAGATCCACATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVKCISM*KIHMRE Trigger: TTCCCTCATGTGGATCTTGCACATGCTAATACATTT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGAGGGAACATTACGAATaGTGCATAGAGAAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVREHYE*CIEKFS Trigger: ACTGAATTTCTCTATGCAGCATTCGTAATGTTCCCT...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGATGTGTAGAACCCTCTaGTTGTGTTTAAATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWMCRTL*LCLNRM Trigger: CATTCTATTTAAACACAAGCAGAGGGTTCTACACAT...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTACAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNLYDTMKAGLRGKFIALQSPIM*GTPEER Trigger: TCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTG...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTCAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTQSPIM*GTPEER Trigger: TCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTG...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGTGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVCTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTTTTGTGATAATAAAGTaGTTCTGGCAGCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTFVIIK*FWQPDS Trigger: GGAATCTGGCTGCCAGAATCACTTTATTATCACAAA...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR TCA 90 bp | TATTTGGCCATTGGTTTACTAGCTTTTCTAAACATCATCTGGGCTAAGGAAAAATTTGTGATAATAAAGTaGTTCTGGCAGCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLAIGLLAFLNIIWAKEKFVIIK*FWQPDS Trigger: GGAATCTGGCTGCCAGAATCACTTTATTATCACAAA...TTTTTCCTTAGCCCAGATGATGTTTAGAAAAGCTAGTAAACCAATGGCCAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTATTTGTGATAATAAAGTaGTTCTGGCAGCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNLYDTMKAGLRGKFIALFVIIK*FWQPDS Trigger: GGAATCTGGCTGCCAGAATCACTTTATTATCACAAA...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | GAACCAATTTGCTCTCCATTCAGTCTGATGTTAGCTATTGACTTGATGTATGTGGAACATTACGAATGCTaGATAGAGAAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPICSPFSLMLAIDLMYVEHYEC*IEKFSD Trigger: ATCACTGAATTTCTCTATGCAGCATTCGTAATGTTC...CACATACATCAAGTCAATAGCTAACATCAGACTGAATGGAGAGCAAATTGGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTACAGCTTTGACTTTATaGTCCTTCCAACAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTTALTL*SFQQDF Trigger: AAAATCCTGTTGGAAGGATCATAAAGTCAAAGCTGT...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTATGTGTTTTACAGCTTTaGCTTTATGATCCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PNLYDTMKAGLRGKFIALCVLQL*LYDPSN Trigger: GTTGGAAGGATCATAAAGTCAAAGCTGTAAAACACA...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR TCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTACAAAGAGAAATGATGTaGTTTATGTTCATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNLYDTMKAGLRGKFIALQREMM*FMFISH Trigger: GTGGCTGATGAACATAAATCACATCATTTCTCTTTG...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTAAATGTATTAGCATGTaGAAGATCCACATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTKCISM*KIHMRE Trigger: TTCCCTCATGTGGATCTTGCACATGCTAATACATTT...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTAGGGAACATTACGAATaGTGCATAGAGAAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTREHYE*CIEKFS Trigger: ACTGAATTTCTCTATGCAGCATTCGTAATGTTCCCT...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | CCAAATTTATATGACACAATGAAAGCAGGCTTAAGAGGAAAGTTCATAGCACTAAGGGAACATTACGAATaGTGCATAGAGAAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PNLYDTMKAGLRGKFIALREHYE*CIEKFS Trigger: ACTGAATTTCTCTATGCAGCATTCGTAATGTTCCCT...TAGTGCTATGAACTTTCCTCTTAAGCCTGCTTTCATTGTGTCATATAAATTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR CCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTTGTACCCTCTTAAAATaGAGGACAGAGTATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTCTLLK*RTEYKR Trigger: CCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR CAA 72 bp | GTAATCAATGTTTACTCTCTCAATCTTCTATGGCTCTaGTTTGCCTTCCTAAGAGAAATGAATTCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VINVYSLNLLWL*FAFLREMNSEL Trigger: CAGTTCAGAATTCATTTCTCTTAGGAAGGCAAACAAGAGCCATAGAAGATTGAGAGAGTAAACATTGATTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| 3UTR CAA 72 bp | CAGATTGTTTATATGGTGGATTATATTGATGGTACTTaGTATATTAGACCATCCCTGTATCCCTGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIVYMVDYIDGT*YIRPSLYPWYE Trigger: TTCATACCAGGGATACAGGGATGGTCTAATATACAAAGTACCATCAATATAATCCACCATATAAACAATCTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS-3UTR GCA 90 bp | AATTTTCACCTCCATTATCTCCAGCTCAGGCAAGAAATAAAGAAATTGAAGACTGAACATTACGAATGCTaGATAGAGAAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFHLHYLQLRQEIKKLKTEHYEC*IEKFSD Trigger: ATCACTGAATTTCTCTATGCAGCATTCGTAATGTTC...AGTCTTCAATTTCTTTATTTCTTGCCTGAGCTGGAGATAATGGAGGTGAAAATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS CCA 90 bp | TGTACCCTCTTAAAATGGAGGACAGAGTATAAAAGGCCAGAAATGTaGACACCAGAGCCAGAATGTTCTGGGTGGCTCTGGATTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTLLKWRTEYKRPEM*TPEPECSGWLWIQG Trigger: CCCCTGAATCCAGAGCCACCCAGAACATTCTGGCTCTGGTGTCCACATTTCTGGCCTTTTATACTCTGTCCTCCATTTTAAGAGGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS CCA 90 bp | ACAATATCATTCAAGAACTGCTTCAGTCCCCAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGAATGAACAAGGAATTGGCTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TISFKNCFSPQSPIM*GTPEERMNKELAAS Trigger: ACTGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTGGGGACTGAAGCAGTTCTTGAATGATATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAACCAGCGGACAAAACTCTCCTACTCATTCTGATGTTGGACAAGGTGATACTTAAATGGGCCAAATaGCATCTAGACATGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IQPADKTLLLILMLDKVILKWAK*HLDMRE Trigger: TTCCCTCATGTCTAGATGCAATTTGGCCCATTTAAG...TATCACCTTGTCCAACATCAGAATGAGTAGGAGAGTTTTGTCCGCTGGTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CAA 90 bp | ATTGACAGCATGAAAGGCACAAGAAGGGCACATTATTTGGCCATTGGTTTACTACTTAAATGGGCCAAATaGCATCTAGACATGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IDSMKGTRRAHYLAIGLLLKWAK*HLDMRE Trigger: TTCCCTCATGTCTAGATGCAATTTGGCCCATTTAAG...TAGTAAACCAATGGCCAAATAATGTGCCCTTCTTGTGCCTTTCATGCTGTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATTTCCATTTTGTGGAAGAGTTTGAGGAGTACTCTTCCTGGAAAGTATGGCTTAAATGGGCCAAATaGCATCTAGACATGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHFHFVEEFEEYSSWKVWLKWAK*HLDMRE Trigger: TTCCCTCATGTCTAGATGCAATTTGGCCCATTTAAG...CCATACTTTCCAGGAAGAGTACTCCTCAAACTCTTCCACAAAATGGAAATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
||
| CDS-3UTR CAA 90 bp | TATTTGGCCATTGGTTTACTAGCTTTTCTAAACATCATCTGGGCTAAGGAAAAACTTAAATGGGCCAAATaGCATCTAGACATGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YLAIGLLAFLNIIWAKEKLKWAK*HLDMRE Trigger: TTCCCTCATGTCTAGATGCAATTTGGCCCATTTAAG...TTTTTCCTTAGCCCAGATGATGTTTAGAAAAGCTAGTAAACCAATGGCCAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS CCA 72 bp | TTCAAGAACTGCTTCAGTCCCCAAAGTCCTATTATGTaGGGCACTCCTGAAGAAAGAATGAACAAGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: FKNCFSPQSPIM*GTPEERMNKEL Trigger: CAATTCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATAATAGGACTTTGGGGACTGAAGCAGTTCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS CAA 90 bp | AGTCCTATTATGTGGGGCACTCCTGAAGAAAGAATGAACAAGGAATaGGCTGCCAGTAGGTGCAATAGAATGAAATCTGTAGGCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SPIMWGTPEERMNKE*AASRCNRMKSVGFN Trigger: ATTAAAGCCTACAGATTTCATTCTATTGCACCTACTGGCAGCCAATTCCTTGTTCATTCTTTCTTCAGGAGTGCCCCACATAATAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS GCA 72 bp | CTAGAAACATGTGTGCTATGGATGTGTAGAACCCTCTaGTTGTGTTTAAATAGAATGACTATCATGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LETCVLWMCRTL*LCLNRMTIMEP Trigger: TGGCTCCATGATAGTCATTCTATTTAAACACAAGCAGAGGGTTCTACACATCCATAGCACACATGTTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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| CDS CAA 72 bp | GAAACATGTGTGCTATGGATGTGTAGAACCCTCTGCTaGTGTTTAAATAGAATGACTATCATGGAGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: ETCVLWMCRTLC*CLNRMTIMEPL Trigger: TAGTGGCTCCATGATAGTCATTCTATTTAAACACAAGCAGAGGGTTCTACACATCCATAGCACACATGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057123.7 ENSMUST00000227230.2 ENSMUST00000227232.2 ENSMUST00000227534.2 ENSMUST00000227790.2 ENSMUST00000228145.2 ENSMUST00000228369.2 |
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