RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R181 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000097425

Ensembl transcript IDs: ENSMUST00000181796.4, ENSMUST00000226843.2, ENSMUST00000226978.2, ENSMUST00000227637.2, ENSMUST00000228399.2, ENSMUST00000228842.2

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTaGGACTTTAAACCTCCTAAGGCTCCTGAGCGTGAGCTGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SGEDVQCGSWYPPWS*DFKPPKAPERELLL
Trigger: CAAAAGCAGCTCACGCTCAGGAGCCTTAGGAGGTTTAAAGTCTCAGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 90 bp CAGACCTCTGGTTCCTTCTTGAGGGTCCAGCCAACCCCAACTCCCTaGAGATGCATATTTGCATTCATTTTGCTGGCCTTCAGGTCTTCT +
Preference number: 1 (lower is better)
Translates to: QTSGSFLRVQPTPTP*RCIFAFILLAFRSS
Trigger: AGAAGACCTGAAGGCCAGCAAAATGAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 90 bp CTTCTTGAGGGTCCAGCCAACCCCAACTCCCTGAAGATGCATATTTaGATTCATTTTGCTGGCCTTCAGGTCTTCTCTCCTGTTCCACAC +
Preference number: 1 (lower is better)
Translates to: LLEGPANPNSLKMHI*IHFAGLQVFSPVPH
Trigger: GTGTGGAACAGGAGAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGGCTGGACCCTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 90 bp TCATTTGGCAACCCCATCACTCCACTTGATGCCCTTTCTTTGTACTaGAGGAGGAATCTACAAGTTCCCTCTCCCCACTGTTGCGGATTT +
Preference number: 1 (lower is better)
Translates to: SFGNPITPLDALSLY*RRNLQVPSPHCCGF
Trigger: AAATCCGCAACAGTGGGGAGAGGGAACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGGTTGCCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 90 bp ACTAGTGCCAAGTCTTGGAGAAACTTCTTGAGATGGATCCCAAGTTaGGCAGGTCACTGTACCTCCTTTCCCTCAGTCTCTTTTCCATTT +
Preference number: 1 (lower is better)
Translates to: TSAKSWRNFLRWIPS*AGHCTSFPSVSFPF
Trigger: AAATGGAAAAGAGACTGAGGGAAAGGAGGTACAGTGACCTGCCCAACTTGGGATCCATCTCAAGAAGTTTCTCCAAGACTTGGCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 90 bp TGTTTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTaGAGGGTGGTGAGTAATTCACTGTTTCAGTCAGATTCCAACCAG +
Preference number: 1 (lower is better)
Translates to: CFRAACCRVQLYTRD*RVVSNSLFQSDSNQ
Trigger: CTGGTTGGAATCTGACTGAAACAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 90 bp CCACTGGTTTCCTTGACTTCAGTCCATTGGTTGTGTATAATTATCTaGATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAAT +
Preference number: 1 (lower is better)
Translates to: PLVSLTSVHWLCIII*ISLSFLLSFSEDRN
Trigger: ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACTGAAGTCAAGGAAACCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 90 bp TTCTTTAATCACTCCCCTAATTCAACCGTAGGGATCAATGACTTCTaGCCAATGGTTAGGTATAAGTATCTTTGTATGTCTCAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: FFNHSPNSTVGINDF*PMVRYKYLCMSQSA
Trigger: AGCTGACTGAGACATACAAAGATACTTATACCTAACCATTGGGCAGAAGTCATTGATCCCTACGGTTGAATTAGGGGAGTGATTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTCCCTCTGCCTCCAGTaGTTGCTTTCTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYESLCLQ*LLSSPS
Trigger: GGAGGGAGAAGAAAGCAATCACTGGAGGCAGAGGGA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACCTCTGGTTCCTTCTTaGGGGTCCAGCCAACCCCAA +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRPLVPS*GSSQPQ
Trigger: TTGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCCCTCTGCCTCCAGTaGTTGCTTTCTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSLCLQ*LLSSPS
Trigger: GGAGGGAGAAGAAAGCAATCACTGGAGGCAGAGGGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACACCGTGACCCAGAGTaGAGACATTGCCAAGACCTT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRHRDPE*RHCQDL
Trigger: AAGGTCTTGGCAATGTCTTCACTCTGGGTCACGGTG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGGAGACTGGAGGGTGGTaGGTAATTCACTGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEETGGW*VIHCFS
Trigger: ACTGAAACAGTGAATTACTCACCACCCTCCAGTCTC...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTATCCTCCGTGGTCCTaGGACTTTAAACCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEYPPWS*DFKPPK
Trigger: CTTAGGAGGTTTAAAGTCTCAGGACCACGGAGGATA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCCTGTTCCACACAGCTaGATACCTGATCATGATCTC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEPVPHS*IPDHDL
Trigger: GAGATCATGATCAGGTATTCAGCTGTGTGGAACAGG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTCTTGTGAGCTCTGCTaGCTTTGGACATTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYESCELC*LWTFSG
Trigger: TCCAGAGAATGTCCAAAGGCAGCAGAGCTCACAAGA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGGACTACTGCAAACCATaGATGTCCTTTTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEDYCKP*MSFWVW
Trigger: CCAGACCCAAAAGGACATGCATGGTTTGCAGTAGTC...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATCTGCCTCCAGTGATTaGTTTCTTCTCCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRSASSD*FLLPPK
Trigger: CTTGGGAGGGAGAAGAAAGCAATCACTGGAGGCAGA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 90 bp CTGATTAGTGGGAAGTCTCTAGGAACTCCCTGGGGTTCAGGTTTGTaGAGACTGCTGGTTTTCCTATGGGTCACCCAGTCCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LISGKSLGTPWGSGL*RLLVFLWVTQSFFF
Trigger: GAAGAAGAAGGACTGGGTGACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAGAGACTTCCCACTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGAGACTGGAGGGTGGTaGGTAATTCACTGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVETGGW*VIHCFS
Trigger: ACTGAAACAGTGAATTACTCACCACCCTCCAGTCTC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGAGACTGGAGGGTGGTaGGTAATTCACTGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRETGGW*VIHCFS
Trigger: ACTGAAACAGTGAATTACTCACCACCCTCCAGTCTC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTATCCTCCGTGGTCCTaGGACTTTAAACCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVYPPWS*DFKPPK
Trigger: CTTAGGAGGTTTAAAGTCTCAGGACCACGGAGGATA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACAGATACTTATCTTGTaGGCTCTGCTGCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRQILIL*ALLPLD
Trigger: GTCCAAAGGCAGCAGAGCTCACAAGATAAGTATCTG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCCCTGTTCCACACAGCTaGATACCTGATCATGATCTC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVPVPHS*IPDHDL
Trigger: GAGATCATGATCAGGTATTCAGCTGTGTGGAACAGG...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACCAACCCCAACTCCCTaGAGATGCATATTTGCATTC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRPTPTP*RCIFAF
Trigger: GAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGTCTCAGCTTCTTGTTaGGCTTCTCAGAGGACAGAA +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRVSASC*ASQRTE
Trigger: TTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGAC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGTCTCAGCTTCTTGTTaGGCTTCTCAGAGGACAGAA +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVVSASC*ASQRTE
Trigger: TTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGAC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTTGTCTCCTATCGGATaGGTAGGTGTTTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELSPIG*VGVSDW
Trigger: CCAATCAGAAACACCTACGCATCCGATAGGAGACAA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCTTGTGAGCTCTGCTaGCTTTGGACATTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSCELC*LWTFSG
Trigger: TCCAGAGAATGTCCAAAGGCAGCAGAGCTCACAAGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGAGCTCTGCTGCCTTTaGACATTCTCTGGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRELCCL*TFSGSK
Trigger: TTTGCTTCCAGAGAATGTCCAAAGGCAGCAGAGCTC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGAGCTCTGCTGCCTTTaGACATTCTCTGGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVELCCL*TFSGSK
Trigger: TTTGCTTCCAGAGAATGTCCAAAGGCAGCAGAGCTC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCAAGAGAGTGTGAAGTaGTGTTGTTCAATGGTTGAC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEQESVK*CCSMVD
Trigger: GTCAACCATTGAACAACATCACTTCACACTCTCTTG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTTACCTCACTCAGGATaGTGTTTTGTAACTCCATCC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELPHSG*CFVTPS
Trigger: GGATGGAGTTACAAAACATCATCCTGAGTGAGGTAA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTCTCCTGAGCGTGAGCTaGTTTTGCTTACTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPLLSVS*FCLLFS
Trigger: AGAGAAAAGTAAGCAAAAGCAGCTCACGCTCAGGAG...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTTGTCTCCTATCGGATaGGTAGGTGTTTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLSPIG*VGVSDW
Trigger: CCAATCAGAAACACCTACGCATCCGATAGGAGACAA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCAGTGTATGAGAGATaGCAGGGGTCTGTGTTAGTT +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSVYER*QGSVLV
Trigger: AACTAACACAGACCCCTGGCATCTCTCATACACTGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCCTATTGTGGGACATCTaGGTTGTTTCCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLLWDI*VVSNFW
Trigger: CCAGAAGTTGGAAACAACCCAGATGTCCCACAATAG...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACTAGTGCCAAGTCTTaGAGAAACTTCTTGAGATGG +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYETSAKS*RNFLRW
Trigger: CCATCTCAAGAAGTTTCTCCAAGACTTGGCACTAGT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTCAAGAGAGTGTGAAGTaGTGTTGTTCAATGGTTGAC +
Preference number: 2 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPQESVK*CCSMVD
Trigger: GTCAACCATTGAACAACATCACTTCACACTCTCTTG...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTTTTCTCTTTACTCTTaGTGTTGTGAGCAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEFSLYS*CCEQLA
Trigger: TGCAAGCTGCTCACAACATCAAGAGTAAAGAGAAAA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCTATTTCCAGTTTTCTaGGGAATCTCCAGACTGATT +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELFPVF*GISRLI
Trigger: AATCAGTCTGGAGATTCCTCAGAAAACTGGAAATAG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTTACCTCACTCAGGATaGTGTTTTGTAACTCCATCC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLPHSG*CFVTPS
Trigger: GGATGGAGTTACAAAACATCATCCTGAGTGAGGTAA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATTACCTCACTCAGGATaGTGTTTTGTAACTCCATCC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRLPHSG*CFVTPS
Trigger: GGATGGAGTTACAAAACATCATCCTGAGTGAGGTAA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTGTTTTAGAGCAGCTTaGTGCAGAGTGCAGTTATAT +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYECFRAA*CRVQLY
Trigger: ATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTATTTGCATTCATTTTaGTGGCCTTCAGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEYLHSF*WPSGLL
Trigger: GAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGGGATCAATGACTTCTaGCCAATGGTTAGGTATAAG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVGINDF*PMVRYK
Trigger: CTTATACCTAACCATTGGGCAGAAGTCATTGATCCC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGCCCTTTCTTTGTACTaGAGGAGGAATCTACAAGTT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRALSLY*RRNLQV
Trigger: AACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAACTAGTGCCAAGTCTTaGAGAAACTTCTTGAGATGG +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRTSAKS*RNFLRW
Trigger: CCATCTCAAGAAGTTTCTCCAAGACTTGGCACTAGT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCACTAGTGCCAAGTCTTaGAGAAACTTCTTGAGATGG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVTSAKS*RNFLRW
Trigger: CCATCTCAAGAAGTTTCTCCAAGACTTGGCACTAGT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATGCGTAGGTGTTTCTaGTTGGAAAAACAATTTCAC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEMRRCF*LEKQFH
Trigger: GTGAAATTGTTTTTCCAATCAGAAACACCTACGCAT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAAGAAAATAATTTTGTaGCTGAGGAAGCCACTGACA +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEKKIIL*LRKPLT
Trigger: TGTCAGTGGCTTCCTCAGTCACAAAATTATTTTCTT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCCTATTTCCAGTTTTCTaGGGAATCTCCAGACTGATT +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLFPVF*GISRLI
Trigger: AATCAGTCTGGAGATTCCTCAGAAAACTGGAAATAG...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCTCTGGTTCCTTCTTaGGGGTCCAGCCAACCCCAA +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPLVPS*GSSQPQ
Trigger: TTGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTTGTTTTAGAGCAGCTTaGTGCAGAGTGCAGTTATAT +
Preference number: 2 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPCFRAA*CRVQLY
Trigger: ATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACA...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATGTTTTAGAGCAGCTTaGTGCAGAGTGCAGTTATAT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRCFRAA*CRVQLY
Trigger: ATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTATTTGCATTCATTTTaGTGGCCTTCAGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVYLHSF*WPSGLL
Trigger: GAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCTGAAGATGCATATTTaGATTCATTTTGCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELKMHI*IHFAGL
Trigger: AAGGCCAGCAAAATGAATGCAAATATGCATCTTCAG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCAGATGGAGAACTATaGAGGGATTCTGTTGTTATC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSDGEL*RDSVVI
Trigger: GATAACAACAGAATCCCTCCATAGTTCTCCATCTGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTCCTTATTTGTTCAGATaGAGAACTATGGAGGGATTC +
Preference number: 2 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPPYLFR*RTMEGF
Trigger: GAATCCCTCCATAGTTCTCCATCTGAACAAATAAGG...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATTCATTCTTCTATTGTaGGACATCTGGGTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRFILLL*DIWVVS
Trigger: GGAAACAACCCAGATGTCCCACAATAGAAGAATGAA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTTCATTCTTCTATTGTaGGACATCTGGGTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVFILLL*DIWVVS
Trigger: GGAAACAACCCAGATGTCCCACAATAGAAGAATGAA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAATGCGTAGGTGTTTCTaGTTGGAAAAACAATTTCAC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRMRRCF*LEKQFH
Trigger: GTGAAATTGTTTTTCCAATCAGAAACACCTACGCAT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAAAGAAAATAATTTTGTaGCTGAGGAAGCCACTGACA +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRKKIIL*LRKPLT
Trigger: TGTCAGTGGCTTCCTCAGTCACAAAATTATTTTCTT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTCCCTCTGCCTCCAGTaGTTGCTTTCTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSLCLQ*LLSSPS
Trigger: GGAGGGAGAAGAAAGCAATCACTGGAGGCAGAGGGA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTCTTTCTCCACATTTTaGAAACATGTTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYESFSTF*KHVLSP
Trigger: AGGAGACAAAACATGTTTGCAAAATGTGGAGAAAGA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACTTATTAGTGACTACTaGAAACCATGCATGTCCTTT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRLISDY*KPCMSF
Trigger: AAAGGACATGCATGGTTTGCAGTAGTCACTAATAAG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCCTGAAGATGCATATTTaGATTCATTTTGCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLKMHI*IHFAGL
Trigger: AAGGCCAGCAAAATGAATGCAAATATGCATCTTCAG...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACTGAAGATGCATATTTaGATTCATTTTGCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRLKMHI*IHFAGL
Trigger: AAGGCCAGCAAAATGAATGCAAATATGCATCTTCAG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGTAGGTGTTTCTGATTaGAAAAACAATTTCACCGTG +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRVGVSD*KNNFTV
Trigger: CACGGTGAAATTGTTTTTCCAATCAGAAACACCTAC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGTAGGTGTTTCTGATTaGAAAAACAATTTCACCGTG +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVVGVSD*KNNFTV
Trigger: CACGGTGAAATTGTTTTTCCAATCAGAAACACCTAC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTTGACTTCAGTCCATTaGTTGTGTATAATTATCTGC +
Preference number: 2 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELTSVH*LCIIIC
Trigger: GCAGATAATTATACACAACCAATGGACTGAAGTCAA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATCTTTCTCCACATTTTaGAAACATGTTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRSFSTF*KHVLSP
Trigger: AGGAGACAAAACATGTTTGCAAAATGTGGAGAAAGA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCCCATTTTTGTCTTTaGAGTTCTTTTAGACAGGAA +
Preference number: 2 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSHFCL*SSFRQE
Trigger: TTCCTGTCTAAAAGAACTGCAAAGACAAAAATGGGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATTGACTTCAGTCCATTaGTTGTGTATAATTATCTGC +
Preference number: 2 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRLTSVH*LCIIIC
Trigger: GCAGATAATTATACACAACCAATGGACTGAAGTCAA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 90 bp TCAGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTaGTTGAGCTTCTCAGAGGACAGAAATGCTAGGCTCCTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: SVHWLCIIICISLSF*LSFSEDRNARLLSV
Trigger: TACAGACAGGAGCCTAGCATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCCTCCCAAGTGGGATTaGAACATCCTCATTTGTGCC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNPPKWD*NILICA
Trigger: GGCACAAATGAGGATGTTTCAATCCCACTTGGGAGG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCCCATCACTCCACTTaGTGCCCTTTCTTTGTACTG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPHHST*CPFFVL
Trigger: CAGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTCTGCCTCCAGTGATTaGTTTCTTCTCCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELSASSD*FLLPPK
Trigger: CTTGGGAGGGAGAAGAAAGCAATCACTGGAGGCAGA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTCTGCCTCCAGTGATTaGTTTCTTCTCCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSASSD*FLLPPK
Trigger: CTTGGGAGGGAGAAGAAAGCAATCACTGGAGGCAGA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTATCCTCCGTGGTCCTaGGACTTTAAACCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELYPPWS*DFKPPK
Trigger: CTTAGGAGGTTTAAAGTCTCAGGACCACGGAGGATA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCAGATACTTATCTTGTaGGCTCTGCTGCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNQILIL*ALLPLD
Trigger: GTCCAAAGGCAGCAGAGCTCACAAGATAAGTATCTG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCAGATACTTATCTTGTaGGCTCTGCTGCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELQILIL*ALLPLD
Trigger: GTCCAAAGGCAGCAGAGCTCACAAGATAAGTATCTG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCAACCCCAACTCCCTaGAGATGCATATTTGCATTC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPTPTP*RCIFAF
Trigger: GAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCCAACCCCAACTCCCTaGAGATGCATATTTGCATTC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNPTPTP*RCIFAF
Trigger: GAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTCTTGTGAGCTCTGCTaGCTTTGGACATTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSCELC*LWTFSG
Trigger: TCCAGAGAATGTCCAAAGGCAGCAGAGCTCACAAGA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATGACTACTGCAAACCATaGATGTCCTTTTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNDYCKP*MSFWVW
Trigger: CCAGACCCAAAAGGACATGCATGGTTTGCAGTAGTC...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATGAGCTCTGCTGCCTTTaGACATTCTCTGGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNELCCL*TFSGSK
Trigger: TTTGCTTCCAGAGAATGTCCAAAGGCAGCAGAGCTC...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTTGTCTCCTATCGGATaGGTAGGTGTTTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELLSPIG*VGVSDW
Trigger: CCAATCAGAAACACCTACGCATCCGATAGGAGACAA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTTGTCTCCTATCGGATaGGTAGGTGTTTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNLSPIG*VGVSDW
Trigger: CCAATCAGAAACACCTACGCATCCGATAGGAGACAA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTATTGTGGGACATCTaGGTTGTTTCCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELLLWDI*VVSNFW
Trigger: CCAGAAGTTGGAAACAACCCAGATGTCCCACAATAG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCTATTGTGGGACATCTaGGTTGTTTCCAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNLLWDI*VVSNFW
Trigger: CCAGAAGTTGGAAACAACCCAGATGTCCCACAATAG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTAGAAACTTCTTGAGATaGATCCCAAGTTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELRNFLR*IPSWAG
Trigger: ACCTGCCCAACTTGGGATCCATCTCAAGAAGTTTCT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATAGAAACTTCTTGAGATaGATCCCAAGTTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNRNFLR*IPSWAG
Trigger: ACCTGCCCAACTTGGGATCCATCTCAAGAAGTTTCT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 90 bp GATATTAGCCGCACTGATTGCTATAAGGAGGAATCTCATTGTCCTTaGTTAAGCATTTCCCTGAGCACTAGGGCTTTTGAGAAATTCTTT +
Preference number: 2 (lower is better)
Translates to: DISRTDCYKEESHCP*LSISLSTRAFEKFF
Trigger: AAAGAATTTCTCAAAAGCCCTAGTGCTCAGGGAAATGCTTAACAAAGGACAATGAGATTCCTCCTTATAGCAATCAGTGCGGCTAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTGCCCTTTCTTTGTACTaGAGGAGGAATCTACAAGTT +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELALSLY*RRNLQV
Trigger: AACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGC...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATGCCCTTTCTTTGTACTaGAGGAGGAATCTACAAGTT +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNALSLY*RRNLQV
Trigger: AACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGC...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATACTAGTGCCAAGTCTTaGAGAAACTTCTTGAGATGG +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNTSAKS*RNFLRW
Trigger: CCATCTCAAGAAGTTTCTCCAAGACTTGGCACTAGT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 90 bp TCCCTCCCAAGTGGGATTGAAACATCCTCATTTGTGCCCTTCATATaGTTAAACTTACTGAGTTCTATGATTGTATCCTGGATATACTGT +
Preference number: 2 (lower is better)
Translates to: SLPSGIETSSFVPFI*LNLLSSMIVSWIYC
Trigger: ACAGTATATCCAGGATACAATCATAGAACTCAGTAAGTTTAACAATATGAAGGGCACAAATGAGGATGTTTCAATCCCACTTGGGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTTTTCTCTTTACTCTTaGTGTTGTGAGCAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELFSLYS*CCEQLA
Trigger: TGCAAGCTGCTCACAACATCAAGAGTAAAGAGAAAA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTGTTTTAGAGCAGCTTaGTGCAGAGTGCAGTTATAT +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELCFRAA*CRVQLY
Trigger: ATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTATTTGCATTCATTTTaGTGGCCTTCAGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELYLHSF*WPSGLL
Trigger: GAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTATTTGCATTCATTTTaGTGGCCTTCAGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNYLHSF*WPSGLL
Trigger: GAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTCAGATGGAGAACTATaGAGGGATTCTGTTGTTATC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELSDGEL*RDSVVI
Trigger: GATAACAACAGAATCCCTCCATAGTTCTCCATCTGA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCTTATTTGTTCAGATaGAGAACTATGGAGGGATTC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPYLFR*RTMEGF
Trigger: GAATCCCTCCATAGTTCTCCATCTGAACAAATAAGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCCTTATTTGTTCAGATaGAGAACTATGGAGGGATTC +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNPYLFR*RTMEGF
Trigger: GAATCCCTCCATAGTTCTCCATCTGAACAAATAAGG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTTCATTCTTCTATTGTaGGACATCTGGGTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELFILLL*DIWVVS
Trigger: GGAAACAACCCAGATGTCCCACAATAGAAGAATGAA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTAAGAAAATAATTTTGTaGCTGAGGAAGCCACTGACA +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELKKIIL*LRKPLT
Trigger: TGTCAGTGGCTTCCTCAGTCACAAAATTATTTTCTT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCTGAAGATGCATATTTaGATTCATTTTGCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNLKMHI*IHFAGL
Trigger: AAGGCCAGCAAAATGAATGCAAATATGCATCTTCAG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTGTAGGTGTTTCTGATTaGAAAAACAATTTCACCGTG +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELVGVSD*KNNFTV
Trigger: CACGGTGAAATTGTTTTTCCAATCAGAAACACCTAC...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTCTTTCTCCACATTTTaGAAACATGTTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSFSTF*KHVLSP
Trigger: AGGAGACAAAACATGTTTGCAAAATGTGGAGAAAGA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR GCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTTCTTTCTCCACATTTTaGAAACATGTTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELSFSTF*KHVLSP
Trigger: AGGAGACAAAACATGTTTGCAAAATGTGGAGAAAGA...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACCTCTGGTTCCTTCTaGAGGGTCCAGCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYETSGSF*RVQPTP
Trigger: TGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGGT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAACCTCTGGTTCCTTCTaGAGGGTCCAGCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRTSGSF*RVQPTP
Trigger: TGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGGT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 72 bp GATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTaGGACTTTAAACCTCCTAAGGCTCCTGAGCGTGAG +
Preference number: 3 (lower is better)
Translates to: DVQCGSWYPPWS*DFKPPKAPERE
Trigger: CTCACGCTCAGGAGCCTTAGGAGGTTTAAAGTCTCAGGACCACGGAGGATACCAGGATCCACACTGGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 72 bp CCCACTGTTGCGGATTTCATCTATAGTCCCTCCCTTTaGGTCCAGAGAGTCTCTCACCTCCCAGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: PTVADFIYSPSL*VQRVSHLPDLW
Trigger: CCAGAGGTCTGGGAGGTGAGAGACTCTCTGGACTCAAAGGGAGGGACTATAGATGAAATCCGCAACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCCCTCCCAAGTGGGATaGAAACATCCTCATTTGTGC +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEPSQVG*KHPHLC
Trigger: GCACAAATGAGGATGTTTCAATCCCACTTGGGAGGG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGTCTCAGCTTCTTGTaGAGCTTCTCAGAGGACAGA +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYESLSFL*SFSEDR
Trigger: TCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCAACCACTGGTTTCCTaGACTTCAGTCCATTGGTTG +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEQPLVS*TSVHWL
Trigger: CAACCAATGGACTGAAGTCAAGGAAACCAGTGGTTG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCTTGATGCCCTTTCTTaGTACTGGAGGAGGAATCTA +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELDALS*YWRRNL
Trigger: TAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAACCCCATCACTCCACTaGATGCCCTTTCTTTGTACT +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRTPSLH*MPFLCT
Trigger: AGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGGT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp GTTCTTTTAGACAGGAACAATCCAGCTGGCATATGTTaGCTGGGTGGTGGCTCAGTGTATGAGAGATGCCAG +
Preference number: 3 (lower is better)
Translates to: VLLDRNNPAGIC*LGGGSVYERCQ
Trigger: CTGGCATCTCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTCTAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp AACCCCATCACTCCACTTGATGCCCTTTCTTTGTACTaGAGGAGGAATCTACAAGTTCCCTCTCCCCACTGT +
Preference number: 3 (lower is better)
Translates to: NPITPLDALSLY*RRNLQVPSPHC
Trigger: ACAGTGGGGAGAGGGAACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGGAATCTCATTGTCCTTaGTTAAGCATTTCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEESHCP*LSISLS
Trigger: GCTCAGGGAAATGCTTAACAAAGGACAATGAGATTC...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACTTGATGCCCTTTCTTaGTACTGGAGGAGGAATCTA +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRLDALS*YWRRNL
Trigger: TAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTCTTGGAGAAACTTCTaGAGATGGATCCCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVSWRNF*RWIPSW
Trigger: CCAACTTGGGATCCATCTCAAGAAGTTTCTCCAAGA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp ATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGATaGCAGGGGTCTGTGTTAGTTGAGGGTCATTGTTTT +
Preference number: 3 (lower is better)
Translates to: ICCLGGGSVYER*QGSVLVEGHCF
Trigger: AAAACAATGACCCTCAACTAACACAGACCCCTGGCATCTCTCATACACTGAGCCACCACCCAGGCAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGAGCGTGAGCTGCTTTaGCTTACTTTTCTCTTTACT +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRERELL*LTFLFT
Trigger: AGTAAAGAGAAAAGTAAGCAAAAGCAGCTCACGCTC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGGTGTTTCTCAGCCATTaGAGATTTCCCTTTTGTGAA +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEVFLSH*RFPFCE
Trigger: TTCACAAAAGGGAAATCTCAAATGGCTGAGAAACAC...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGCTCTTTCTCCACATTTaGCAAACATGTTTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELFLHI*QTCFVS
Trigger: GGAGACAAAACATGTTTGCAAAATGTGGAGAAAGAG...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATATTTGCATTCATTTaGCTGGCCTTCAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEIFAFI*LAFRSS
Trigger: AGAAGACCTGAAGGCCAGCAAAATGAATGCAAATAT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCCCTGAAGATGCATATTaGCATTCATTTTGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVPEDAY*HSFCWP
Trigger: AGGCCAGCAAAATGAATGCAAATATGCATCTTCAGG...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACCTGAAGATGCATATTaGCATTCATTTTGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRPEDAY*HSFCWP
Trigger: AGGCCAGCAAAATGAATGCAAATATGCATCTTCAGG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTACCTCTGGTTCCTTCTaGAGGGTCCAGCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELTSGSF*RVQPTP
Trigger: TGGGGTTGGCTGGACCCTCAAGAAGGAACCAGAGGT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 72 bp GACAGACAGAGTGACAACTTTGCCTCCACATTGTTCTaGTACCTCTTGTCTCCTATCGGATGCGTAGGTGTT +
Preference number: 3 (lower is better)
Translates to: DRQSDNFASTLF*YLLSPIGCVGV
Trigger: AACACCTACGCATCCGATAGGAGACAAGAGGTATCAGAACAATGTGGAGGCAAAGTTGTCACTCTGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp CAACTCCCTGAAGATGCATATTTGCATTCATTTTGCTaGCCTTCAGGTCTTCTCTCCTGTTCCACACAGCTG +
Preference number: 3 (lower is better)
Translates to: QLPEDAYLHSFC*PSGLLSCSTQL
Trigger: CAGCTGTGTGGAACAGGAGAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATATGCATCTTCAGGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp TGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATaGGTCACCCAGTCCTTCTTCTTCTTTAATCACTCC +
Preference number: 3 (lower is better)
Translates to: WGSGLLRLLVFL*VTQSFFFFNHS
Trigger: GGAGTGATTAAAGAAGAAGAAGGACTGGGTGACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCGAAGAGGGTAATATTTaGATCAGGACCTTAAAACAC +
Preference number: 3 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVEEGNI*IRTLKH
Trigger: GTGTTTTAAGGTCCTGATCAAAATATTACCCTCTTC...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTGAAGAGGGTAATATTTaGATCAGGACCTTAAAACAC +
Preference number: 3 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPEEGNI*IRTLKH
Trigger: GTGTTTTAAGGTCCTGATCAAAATATTACCCTCTTC...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGAAGAGGGTAATATTTaGATCAGGACCTTAAAACAC +
Preference number: 3 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMREEGNI*IRTLKH
Trigger: GTGTTTTAAGGTCCTGATCAAAATATTACCCTCTTC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp GGGAAAATGGGTTTCACTTGTTTTAGAGCAGCTTGCTaGAGAGTGCAGTTATATACAAGAGACTGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: GKMGFTCFRAAC*RVQLYTRDWRV
Trigger: CACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAAACAAGTGAAACCCATTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp CTCTTGTCTCCTATCGGATGCGTAGGTGTTTCTGATTaGAAAAACAATTTCACCGTGACCCAGAGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: LLSPIGCVGVSD*KNNFTVTQSED
Trigger: GTCTTCACTCTGGGTCACGGTGAAATTGTTTTTCCAATCAGAAACACCTACGCATCCGATAGGAGACAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 72 bp CAGCAGGGTCTTCAGGTAGATCTATTTCCAGTTTTCTaGGGAATCTCCAGACTGATTTCTAGAGTGATCGCA +
Preference number: 3 (lower is better)
Translates to: QQGLQVDLFPVF*GISRLISRVIA
Trigger: TGCGATCACTCTAGAAATCAGTCTGGAGATTCCTCAGAAAACTGGAAATAGATCTACCTGAAGACCCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCCTCCCAAGTGGGATaGAAACATCCTCATTTGTGC +
Preference number: 3 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPSQVG*KHPHLC
Trigger: GCACAAATGAGGATGTTTCAATCCCACTTGGGAGGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp GAGACTTTAAACCTCCTAAGGCTCCTGAGCGTGAGCTaGTTTTGCTTACTTTTCTCTTTACTCTTGATGTTG +
Preference number: 3 (lower is better)
Translates to: ETLNLLRLLSVS*FCLLFSLLLML
Trigger: CAACATCAAGAGTAAAGAGAAAAGTAAGCAAAAGCAGCTCACGCTCAGGAGCCTTAGGAGGTTTAAAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp ATCTCCAGACTGATTTCTAGAGTGATCGCACCAGTTTaGAATCCCACCAGCAATGGAGAAATGTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: ISRLISRVIAPV*NPTSNGEMFLF
Trigger: AAAGAGAAACATTTCTCCATTGCTGGTGGGATTGCAAACTGGTGCGATCACTCTAGAAATCAGTCTGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp CTTATTAGTGACTACTGCAAACCATGCATGTCCTTTTaGGTCTGGGTTACCTCACTCAGGATGATGTTTTGT +
Preference number: 3 (lower is better)
Translates to: LISDYCKPCMSF*VWVTSLRMMFC
Trigger: ACAAAACATCATCCTGAGTGAGGTAACCCAGACCCAAAAGGACATGCATGGTTTGCAGTAGTCACTAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTACCCCATCACTCCACTaGATGCCCTTTCTTTGTACT +
Preference number: 3 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELTPSLH*MPFLCT
Trigger: AGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGGT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp TGCTATAACCACTCCAGATACTTATCTTGTGAGCTCTaGTGCCTTTGGACATTCTCTGGAAGCAAAAATAAG +
Preference number: 3 (lower is better)
Translates to: CYNHSRYLSCEL*CLWTFSGSKNK
Trigger: CTTATTTTTGCTTCCAGAGAATGTCCAAAGGCAGCAGAGCTCACAAGATAAGTATCTGGAGTGGTTATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp TCCTTGACTTCAGTCCATTGGTTGTGTATAATTATCTaGATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: SLTSVHWLCIII*ISLSFLLSFSE
Trigger: CTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACTGAAGTCAAGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp CACTCCCCTAATTCAACCGTAGGGATCAATGACTTCTaGCCAATGGTTAGGTATAAGTATCTTTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: HSPNSTVGINDF*PMVRYKYLCMS
Trigger: AGACATACAAAGATACTTATACCTAACCATTGGGCAGAAGTCATTGATCCCTACGGTTGAATTAGGGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCTTGATGCCCTTTCTTaGTACTGGAGGAGGAATCTA +
Preference number: 3 (lower is better)
Translates to: IIICISLSFLLSFSEDRNLDALS*YWRRNL
Trigger: TAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTCTTGGAGAAACTTCTaGAGATGGATCCCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSWRNF*RWIPSW
Trigger: CCAACTTGGGATCCATCTCAAGAAGTTTCTCCAAGA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTGAATCTCATTGTCCTTaGTTAAGCATTTCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELESHCP*LSISLS
Trigger: GCTCAGGGAAATGCTTAACAAAGGACAATGAGATTC...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCCTGAAGATGCATATTaGCATTCATTTTGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELPEDAY*HSFCWP
Trigger: AGGCCAGCAAAATGAATGCAAATATGCATCTTCAGG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR GCA 72 bp TATAACCACTCCAGATACTTATCTTGTGAGCTCTGCTaGCTTTGGACATTCTCTGGAAGCAAAAATAAGGTT +
Preference number: 3 (lower is better)
Translates to: YNHSRYLSCELC*LWTFSGSKNKV
Trigger: AACCTTATTTTTGCTTCCAGAGAATGTCCAAAGGCAGCAGAGCTCACAAGATAAGTATCTGGAGTGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CCA 72 bp CTAATTCAACCACTGGTTTCCTTGACTTCAGTCCATTaGTTGTGTATAATTATCTGCATCAGTCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LIQPLVSLTSVH*LCIIICISLSF
Trigger: GAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACTGAAGTCAAGGAAACCAGTGGTTGAATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATCTCTTTCTCCACATTTaGCAAACATGTTTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: IIICISLSFLLSFSEDRNLFLHI*QTCFVS
Trigger: GGAGACAAAACATGTTTGCAAAATGTGGAGAAAGAG...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATATATTTGCATTCATTTaGCTGGCCTTCAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: IIICISLSFLLSFSEDRNIFAFI*LAFRSS
Trigger: AGAAGACCTGAAGGCCAGCAAAATGAATGCAAATAT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR TCA 72 bp CTCTTTCTCCACATTTTGCAAACATGTTTTGTCTCCTaGGTTCTTGATATTAGCCGCACTGATTGCTATAAG +
Preference number: 3 (lower is better)
Translates to: LFLHILQTCFVS*VLDISRTDCYK
Trigger: CTTATAGCAATCAGTGCGGCTAATATCAAGAACTCAGGAGACAAAACATGTTTGCAAAATGTGGAGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATGTGGTGTTTGGTTTTTaGGATGTTAGCTTCTTGAAT +
Preference number: 3 (lower is better)
Translates to: IIICISLSFLLSFSEDRNVVFGF*DVSFLN
Trigger: ATTCAAGAAGCTAACATCCAAAAAACCAAACACCAC...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACAAAGCAAGAGAATCTaGAGAGCCACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRQSKRI*RATSSV
Trigger: CACCGAGGAAGTGGCTCTTCAGATTCTCTTGCTTTG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR GCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTGGAACATAAGCCTGTaGTTCTTGCCACCATGCGAA +
Preference number: 4 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEWNISL*FLPPCE
Trigger: TTCGCATGGTGGCAAGAAGCACAGGCTTATGTTCCA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp GGGTCCAGCCAACCCCAACTCCCTGAAGATGCATATTaGCATTCATTTTGCTGGCCTTCAGGTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSSQPQLPEDAY*HSFCWPSGLLS
Trigger: GGAGAGAAGACCTGAAGGCCAGCAAAATGAATGCAAATATGCATCTTCAGGGAGTTGGGGTTGGCTGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR GCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTGGAACATAAGCCTGTaGTTCTTGCCACCATGCGAA +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVWNISL*FLPPCE
Trigger: TTCGCATGGTGGCAAGAAGCACAGGCTTATGTTCCA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGTTGGCCACAGCTATGTaGCTTAAAATCACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DRNNPAGICCLGGGSVYELATAM*LKITCL
Trigger: CAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAA...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGCATCAGGATAGTATaGGTTGCTTTGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DRNNPAGICCLGGGSVYESIRIV*VALVSA
Trigger: AGCTGAGACCAAAGCAACCCATACTATCCTGATGCT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp TTTGGCAACCCCATCACTCCACTTGATGCCCTTTCTTaGTACTGGAGGAGGAATCTACAAGTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FGNPITPLDALS*YWRRNLQVPSP
Trigger: GGGAGAGGGAACTTGTAGATTCCTCCTCCAGTACAAAGAAAGGGCATCAAGTGGAGTGATGGGGTTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGCAAAGCAAGAGAATCTaGAGAGCCACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVQSKRI*RATSSV
Trigger: CACCGAGGAAGTGGCTCTTCAGATTCTCTTGCTTTG...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTTGGCCACAGCTATGTaGCTTAAAATCACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVLATAM*LKITCL
Trigger: CAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCTACTCAAGACACAGGTaGAACATAAGCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVYSRHR*NISLCF
Trigger: GAAGCACAGGCTTATGTTCCACCTGTGTCTTGAGTA...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATACTCAAGACACAGGTaGAACATAAGCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRYSRHR*NISLCF
Trigger: GAAGCACAGGCTTATGTTCCACCTGTGTCTTGAGTA...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACTGTCTGTTATCTGTaGACCAGTGACCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: DRNNPAGICCLGGGSVYETVCYL*TSDLNW
Trigger: CCAATTAAGGTCACTGGTCCACAGATAACAGACAGT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGCAAAGCAAGAGAATCTaGAGAGCCACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLQSKRI*RATSSV
Trigger: CACCGAGGAAGTGGCTCTTCAGATTCTCTTGCTTTG...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACAAGAGTGAGAAATTaGTGGATACTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: DRNNPAGICCLGGGSVYETRVRN*WILKTQ
Trigger: CTGTGTCTTGAGTATCCATCAATTTCTCACTCTTGT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR GCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGTGGAACATAAGCCTGTaGTTCTTGCCACCATGCGAA +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVWNISL*FLPPCE
Trigger: TTCGCATGGTGGCAAGAAGCACAGGCTTATGTTCCA...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGAGAGTCAAGGCATTaGCCACAGCTATGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVRESRH*PQLCGL
Trigger: TAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAACTGTCTGTTATCTGTaGACCAGTGACCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRTVCYL*TSDLNW
Trigger: CCAATTAAGGTCACTGGTCCACAGATAACAGACAGT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCACTGTCTGTTATCTGTaGACCAGTGACCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVTVCYL*TSDLNW
Trigger: CCAATTAAGGTCACTGGTCCACAGATAACAGACAGT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACATTTGAGGTCATTTTaGGGACTTCTTGGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRHLRSF*GLLGAK
Trigger: TTTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATG...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGAGAGAGTCAAGGCATTaGCCACAGCTATGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLRESRH*PQLCGL
Trigger: TAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCT...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGTACTCAAGACACAGGTaGAACATAAGCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVYSRHR*NISLCF
Trigger: GAAGCACAGGCTTATGTTCCACCTGTGTCTTGAGTA...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGCATCAGGATAGTATaGGTTGCTTTGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVSIRIV*VALVSA
Trigger: AGCTGAGACCAAAGCAACCCATACTATCCTGATGCT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGTTGGCCACAGCTATGTaGCTTAAAATCACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLLATAM*LKITCL
Trigger: CAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAA...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGACAAGAGTGAGAAATTaGTGGATACTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVTRVRN*WILKTQ
Trigger: CTGTGTCTTGAGTATCCATCAATTTCTCACTCTTGT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAA +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVRTSQD*KEIMDK
Trigger: TTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAA +
Preference number: 4 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRRTSQD*KEIMDK
Trigger: TTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAA +
Preference number: 4 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPRTSQD*KEIMDK
Trigger: TTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCT...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVKSHVV*KCSDEE
Trigger: CTCTTCATCACTACATTTCCAAACAACATGGCTTTT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPKSHVV*KCSDEE
Trigger: CTCTTCATCACTACATTTCCAAACAACATGGCTTTT...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTAGAACAACTTGCTTTTaGAGTCATTTTTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPRTTCF*SHFYCL
Trigger: CAGACAGTAAAAATGACTCCAAAAGCAAGTTGTTCT...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCAGAACAACTTGCTTTTaGAGTCATTTTTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVRTTCF*SHFYCL
Trigger: CAGACAGTAAAAATGACTCCAAAAGCAAGTTGTTCT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp CGCACTGATTGCTATAAGGAGGAATCTCATTGTCCTTaGTTAAGCATTTCCCTGAGCACTAGGGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RTDCYKEESHCP*LSISLSTRAFE
Trigger: CTCAAAAGCCCTAGTGCTCAGGGAAATGCTTAACAAAGGACAATGAGATTCCTCCTTATAGCAATCAGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCAAAGCAAGAGAATCTaGAGAGCCACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELQSKRI*RATSSV
Trigger: CACCGAGGAAGTGGCTCTTCAGATTCTCTTGCTTTG...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp TTTAAACCTCCTAAGGCTCCTGAGCGTGAGCTGCTTTaGCTTACTTTTCTCTTTACTCTTGATGTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FKPPKAPERELL*LTFLFTLDVVS
Trigger: GCTCACAACATCAAGAGTAAAGAGAAAAGTAAGCAAAAGCAGCTCACGCTCAGGAGCCTTAGGAGGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTGGAACATAAGCCTGTaGTTCTTGCCACCATGCGAA +
Preference number: 4 (lower is better)
Translates to: IIICISLSFLLSFSEDRNWNISL*FLPPCE
Trigger: TTCGCATGGTGGCAAGAAGCACAGGCTTATGTTCCA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAA +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVRTSQD*KEIMDK
Trigger: TTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTAGAGAGTCAAGGCATTaGCCACAGCTATGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELRESRH*PQLCGL
Trigger: TAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGAACAACTTGCTTTTaGAGTCATTTTTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVRTTCF*SHFYCL
Trigger: CAGACAGTAAAAATGACTCCAAAAGCAAGTTGTTCT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp TGGGGCACATGCTCATGTGGATTAGTGGAGCATCTTTaGGTTATAAGTCAAAGAATATTACAGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WGTCSCGLVEHL*VISQRILQQGL
Trigger: AAGACCCTGCTGTAATATTCTTTGACTTATAACCAAAAGATGCTCCACTAATCCACATGAGCATGTGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAA +
Preference number: 4 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLRTSQD*KEIMDK
Trigger: TTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCT...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLKSHVV*KCSDEE
Trigger: CTCTTCATCACTACATTTCCAAACAACATGGCTTTT...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATAGCATCAGGATAGTATaGGTTGCTTTGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IIICISLSFLLSFSEDRNSIRIV*VALVSA
Trigger: AGCTGAGACCAAAGCAACCCATACTATCCTGATGCT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTACTGTCTGTTATCTGTaGACCAGTGACCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELTVCYL*TSDLNW
Trigger: CCAATTAAGGTCACTGGTCCACAGATAACAGACAGT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp CTTACTTTTCTCTTTACTCTTGATGTTGTGAGCAGCTaGCACTTCTCAAGAGAGTGTGAAGTGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LTFLFTLDVVSS*HFSRECEVMLF
Trigger: GAACAACATCACTTCACACTCTCTTGAGAAGTGCAAGCTGCTCACAACATCAAGAGTAAAGAGAAAAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp ATTCAACCACTGGTTTCCTTGACTTCAGTCCATTGGTaGTGTATAATTATCTGCATCAGTCTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IQPLVSLTSVHW*CIIICISLSFL
Trigger: CAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACTGAAGTCAAGGAAACCAGTGGTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR TCA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTACAAGAGTGAGAAATTaGTGGATACTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELTRVRN*WILKTQ
Trigger: CTGTGTCTTGAGTATCCATCAATTTCTCACTCTTGT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp TCCACATTTTGCAAACATGTTTTGTCTCCTGAGTTCTaGATATTAGCCGCACTGATTGCTATAAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: STFCKHVLSPEF*ILAALIAIRRN
Trigger: ATTCCTCCTTATAGCAATCAGTGCGGCTAATATCAAGAACTCAGGAGACAAAACATGTTTGCAAAATGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp TCTTTGTTCACAGACGTAATTAGCACAAGTAAGATTTaGGGTTTCATCATACTGACTGCTATAACCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLFTDVISTSKI*GFIILTAITTP
Trigger: TGGAGTGGTTATAGCAGTCAGTATGATGAAACCCAAAATCTTACTTGTGCTAATTACGTCTGTGAACAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
3UTR CAA 72 bp AGTGGGATTGAAACATCCTCATTTGTGCCCTTCATATaGTTAAACTTACTGAGTTCTATGATTGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: SGIETSSFVPFI*LNLLSSMIVSW
Trigger: CCAGGATACAATCATAGAACTCAGTAAGTTTAACAATATGAAGGGCACAAATGAGGATGTTTCAATCCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR GCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATTGGAACAGAACAACTTaGTTTTGGAGTCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: IIICISLSFLLSFSEDRNWNRTT*FWSHFY
Trigger: GTAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCA...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CCA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: IIICISLSFLLSFSEDRNKSHVV*KCSDEE
Trigger: CTCTTCATCACTACATTTCCAAACAACATGGCTTTT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGATAGTATGGGTTGCTTaGGTCTCAGCTTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEIVWVA*VSAWLL
Trigger: CAGAAGCCAAGCTGAGACCAAAGCAACCCATACTAT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp CTAGGAACTCCCTGGGGTTCAGGTTTGTTGAGACTGCTGGTTTTCCTATGGGTCATAGTATGGGTTGCTTaGGTCTCAGCTTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LGTPWGSGLLRLLVFLWVIVWVA*VSAWLL
Trigger: CAGAAGCCAAGCTGAGACCAAAGCAACCCATACTAT...GACCCATAGGAAAACCAGCAGTCTCAACAAACCTGAACCCCAGGGAGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTATAGTATGGGTTGCTTaGGTCTCAGCTTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPIVWVA*VSAWLL
Trigger: CAGAAGCCAAGCTGAGACCAAAGCAACCCATACTAT...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAATAGTATGGGTTGCTTaGGTCTCAGCTTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRIVWVA*VSAWLL
Trigger: CAGAAGCCAAGCTGAGACCAAAGCAACCCATACTAT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 90 bp GGAAATGTAGTGATGAAGAGAGTCAAGGCATTGGCCACAGCTATGTaGCTTAAAATCACCTGTCTGGGCCTCTGTTTAGAACCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GNVVMKRVKALATAM*LKITCLGLCLEPVR
Trigger: CCTGACTGGTTCTAAACAGAGGCCCAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCTTCATCACTACATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGACATTTGAGGTCATTTaGAGGACTTCTTGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: DRNNPAGICCLGGGSVYETFEVI*RTSWSK
Trigger: TTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGT...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAACATTTGAGGTCATTTaGAGGACTTCTTGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRTFEVI*RTSWSK
Trigger: TTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGT...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp GACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGGTGGAACAGAACAACTaGCTTTTGGAGTCATTTTTA +
Preference number: 5 (lower is better)
Translates to: DRNNPAGICCLGGGSVYEVEQNN*LLESFL
Trigger: TAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCAC...CTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 90 bp ATGGAGACACTGGTCCAGACCATGATGCTCATGAATGTGGCATCATaGGCAAATCGCAAGAAGACAATACCCACATTAAATCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: METLVQTMMLMNVAS*ANRKKTIPTLNPEV
Trigger: CACTTCTGGATTTAATGTGGGTATTGTCTTCTTGCGATTTGCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAGTGTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp ACAGGAACAATCCAGCTGGCATATGTTGCCTGGGTGGTGGCTCAGTGTATGAGAGTGGAACAGAACAACTaGCTTTTGGAGTCATTTTTA +
Preference number: 5 (lower is better)
Translates to: TGTIQLAYVAWVVAQCMRVEQNN*LLESFL
Trigger: TAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCAC...TCTCATACACTGAGCCACCACCCAGGCAACATATGCCAGCTGGATTGTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp AAGACCTTTCAGGAGAAGATGTCCAGTGTGGATCCTGGTATCCTCCGTGGTCCTGTGGAACAGAACAACTaGCTTTTGGAGTCATTTTTA +
Preference number: 5 (lower is better)
Translates to: KTFQEKMSSVDPGILRGPVEQNN*LLESFL
Trigger: TAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCAC...AGGACCACGGAGGATACCAGGATCCACACTGGACATCTTCTCCTGAAAGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGACATTTGAGGTCATTTaGAGGACTTCTTGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVTFEVI*RTSWSK
Trigger: TTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp TTTAGAGCAGCTTGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAACAAGAGTGAGAAATaGATGGATACTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: FRAACCRVQLYTRDWRVVNKSEK*MDTQDT
Trigger: TGTGTCTTGAGTATCCATCAATTTCTCACTCTTGTT...CACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCAAGCTGCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 90 bp TTTGAGGTCATTTTGAGGACTTCTTGGAGCAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAGAGTCAAGGCATTGGCCACAGCTAT +
Preference number: 5 (lower is better)
Translates to: FEVILRTSWSKSHVV*KCSDEESQGIGHSY
Trigger: ATAGCTGTGGCCAATGCCTTGACTCTCTTCATCACTACATTTCCAAACAACATGGCTTTTGCTCCAAGAAGTCCTCAAAATGACCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp TGCTGCAGAGTGCAGTTATATACAAGAGACTGGAGGGTGGTGAGTAATTCACTGGTGGAACAGAACAACTaGCTTTTGGAGTCATTTTTA +
Preference number: 5 (lower is better)
Translates to: CCRVQLYTRDWRVVSNSLVEQNN*LLESFL
Trigger: TAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCAC...CAGTGAATTACTCACCACCCTCCAGTCTCTTGTATATAACTGCACTCTGCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp ATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTCTCAGAGGACAGAAATATAGTATGGGTTGCTTaGGTCTCAGCTTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: IIICISLSFLLSFSEDRNIVWVA*VSAWLL
Trigger: CAGAAGCCAAGCTGAGACCAAAGCAACCCATACTAT...ATTTCTGTCCTCTGAGAAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS-3UTR CAA 90 bp AGTCCATTGGTTGTGTATAATTATCTGCATCAGTCTCAGCTTCTTGTTGAGCTTACATTTGAGGTCATTTaGAGGACTTCTTGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SPLVVYNYLHQSQLLVELTFEVI*RTSWSK
Trigger: TTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGT...AAGCTCAACAAGAAGCTGAGACTGATGCAGATAATTATACACAACCAATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp AGAGTGAATATGTACTGCATTCGCTGGCGATGTCTATaGAGGAGAAGTACCATGGAGACACTGGTCCAGACC +
Preference number: 6 (lower is better)
Translates to: RVNMYCIRWRCL*RRSTMETLVQT
Trigger: GGTCTGGACCAGTGTCTCCATGGTACTTCTCCTCCATAGACATCGCCAGCGAATGCAGTACATATTCACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp GTGATGAAGAGAGTCAAGGCATTGGCCACAGCTATGTaGCTTAAAATCACCTGTCTGGGCCTCTGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: VMKRVKALATAM*LKITCLGLCLE
Trigger: TTCTAAACAGAGGCCCAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCTTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CAA 90 bp AAAGCCATGTTGTTTGGAAATGTAGTGATGAAGAGAGTCAAGGCATaGGCCACAGCTATGTGGCTTAAAATCACCTGTCTGGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: KAMLFGNVVMKRVKA*ATAMWLKITCLGLC
Trigger: ACAGAGGCCCAGACAGGTGATTTTAAGCCACATAGCTGTGGCCAATGCCTTGACTCTCTTCATCACTACATTTCCAAACAACATGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CAA 72 bp CAGCATCAGGATAGTATGGGTTGCTTTGGTCTCAGCTaGGCTTCTGTGGTCCTGATTGAGAGTGAATATGTA +
Preference number: 6 (lower is better)
Translates to: QHQDSMGCFGLS*ASVVLIESEYV
Trigger: TACATATTCACTCTCAATCAGGACCACAGAAGCCAAGCTGAGACCAAAGCAACCCATACTATCCTGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp CACCTGTCTGGGCCTCTGTTTAGAACCAGTCAGGATTaGAAAGAAATTATGGACAAAGAGAAATACATTGGC +
Preference number: 6 (lower is better)
Translates to: HLSGPLFRTSQD*KEIMDKEKYIG
Trigger: GCCAATGTATTTCTCTTTGTCCATAATTTCTTTCCAATCCTGACTGGTTCTAAACAGAGGCCCAGACAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp ATTTTGAGGACTTCTTGGAGCAAAAGCCATGTTGTTTaGAAATGTAGTGATGAAGAGAGTCAAGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: ILRTSWSKSHVV*KCSDEESQGIG
Trigger: GCCAATGCCTTGACTCTCTTCATCACTACATTTCCAAACAACATGGCTTTTGCTCCAAGAAGTCCTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CAA 90 bp TGCCACCATGCGAATGAAGAATTCCAATTTACATTTGAGGTCATTTaGAGGACTTCTTGGAGCAAAAGCCATGTTGTTTGGAAATGTAGT +
Preference number: 6 (lower is better)
Translates to: CHHANEEFQFTFEVI*RTSWSKSHVVWKCS
Trigger: ACTACATTTCCAAACAACATGGCTTTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGTAAATTGGAATTCTTCATTCGCATGGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CAA 90 bp AAGAAGACAATACCCACATTAAATCCAGAAGTGGAACAGAACAACTaGCTTTTGGAGTCATTTTTACTGTCTGTTATCTGTGGACCAGTG +
Preference number: 6 (lower is better)
Translates to: KKTIPTLNPEVEQNN*LLESFLLSVICGPV
Trigger: CACTGGTCCACAGATAACAGACAGTAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCACTTCTGGATTTAATGTGGGTATTGTCTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS TCA 72 bp AGTTTTCCTCTATTAACAGGAACAAGAGTGAGAAATTaGTGGATACTCAAGACACAGGTGGAACATAAGCCT +
Preference number: 6 (lower is better)
Translates to: SFPLLTGTRVRN*WILKTQVEHKP
Trigger: AGGCTTATGTTCCACCTGTGTCTTGAGTATCCATCAATTTCTCACTCTTGTTCCTGTTAATAGAGGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS TCA 72 bp CGAATGAAGAATTCCAATTTACATTTGAGGTCATTTTaGGGACTTCTTGGAGCAAAAGCCATGTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: RMKNSNLHLRSF*GLLGAKAMLFG
Trigger: TCCAAACAACATGGCTTTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGTAAATTGGAATTCTTCATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CAA 72 bp ACATTAAATCCAGAAGTGGAACAGAACAACTTGCTTTaGGAGTCATTTTTACTGTCTGTTATCTGTGGACCA +
Preference number: 6 (lower is better)
Translates to: TLNPEVEQNNLL*ESFLLSVICGP
Trigger: TGGTCCACAGATAACAGACAGTAAAAATGACTCCAAAAGCAAGTTGTTCTGTTCCACTTCTGGATTTAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp TTCCAATTTACATTTGAGGTCATTTTGAGGACTTCTTaGAGCAAAAGCCATGTTGTTTGGAAATGTAGTGAT +
Preference number: 6 (lower is better)
Translates to: FQFTFEVILRTS*SKSHVVWKCSD
Trigger: ATCACTACATTTCCAAACAACATGGCTTTTGCTCCAAGAAGTCCTCAAAATGACCTCAAATGTAAATTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2
CDS CCA 72 bp CTTGCTTTTGGAGTCATTTTTACTGTCTGTTATCTGTaGACCAGTGACCTTAATTGGAATGTAGATGTTATT +
Preference number: 6 (lower is better)
Translates to: LAFGVIFTVCYL*TSDLNWNVDVI
Trigger: AATAACATCTACATTCCAATTAAGGTCACTGGTCCACAGATAACAGACAGTAAAAATGACTCCAAAAGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000181796.4
ENSMUST00000226843.2
ENSMUST00000226978.2
ENSMUST00000227637.2
ENSMUST00000228399.2
ENSMUST00000228842.2