RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091382

Ensembl transcript IDs: ENSMUST00000164732.2, ENSMUST00000228574.2

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGCTCCTCTTTGATAGCAGAACAGCACAATAGTGTCAGGCCTTaGCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGT +
Preference number: 1 (lower is better)
Translates to: PGSSLIAEQHNSVRP*LPPLPLPAMRWIQS
Trigger: ACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGGCAAGGCCTGACACTATTGTGCTGTTCTGCTATCAAAGAGGAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp CCTACAGGTTTACCATCCATTGGGTCCCCTGGGGTTCTAGATCTTTaGTCGACTGGAGACCAGCCTGTCTGTGTGCAGTTCACTGCCTCA +
Preference number: 1 (lower is better)
Translates to: PTGLPSIGSPGVLDL*STGDQPVCVQFTAS
Trigger: TGAGGCAGTGAACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATGGATGGTAAACCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp GTTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAATCTCTaGATGGCCTTTCCTTCAGTCTCTGCTCTACCCTTTTGTCCCTGC +
Preference number: 1 (lower is better)
Translates to: VWCLQMGWIPRWGNL*MAFPSVSALPFCPC
Trigger: GCAGGGACAAAAGGGTAGAGCAGAGACTGAAGGAAAGGCCATTCAGAGATTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp TCACTATCTCTTCCCACAGTTCCTCATCCCATTCCTCCTCCTCCTTaGCTCCAAGAGGGTGCTCTCTACCCTACCAGGTCTATCCTAGGA +
Preference number: 1 (lower is better)
Translates to: SLSLPTVPHPIPPPP*LQEGALYPTRSILG
Trigger: TCCTAGGATAGACCTGGTAGGGTAGAGAGCACCCTCTTGGAGGCAAGGAGGAGGAGGAATGGGATGAGGAACTGTGGGAAGAGATAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp GTCTCTTGTGAGACTATGCCCGGGCCTAGCAAACACAGAAATGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGAAG +
Preference number: 1 (lower is better)
Translates to: VSCETMPGPSKHRNG*SQSAIGWITGPPMK
Trigger: CTTCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCATTTCTGTGTTTGCTAGGCCCGGGCATAGTCTCACAAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp AACAAACCCGGATCACAGAAGCTTCCAGAGACTGAGCCTCCAACCTaGATCATACATGAGCTGGTGCAAGGCTCCTGGCACATAAGTAGC +
Preference number: 1 (lower is better)
Translates to: NKPGSQKLPETEPPT*IIHELVQGSWHISS
Trigger: GCTACTTATGTGCCAGGAGCCTTGCACCAGCTCATGTATGATCCAGGTTGGAGGCTCAGTCTCTGGAAGCTTCTGTGATCCGGGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp TTTACCATCCATTGGGTCCCCTGGGGTTCTAGATCTTTGCTCGACTaGAGACCAGCCTGTCTGTGTGCAGTTCACTGCCTCAAGTGTATC +
Preference number: 1 (lower is better)
Translates to: FTIHWVPWGSRSLLD*RPACLCAVHCLKCI
Trigger: GATACACTTGAGGCAGTGAACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATGGATGGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp CCTGAGATTGTCTCACCTCTCTGGTCTCCAGTACTCTCTAGAGGGTaGCTCTACCTAACACTCCTGGGGGCTGCTATTTCCATTTATTCC +
Preference number: 1 (lower is better)
Translates to: PEIVSPLWSPVLSRG*LYLTLLGAAISIYS
Trigger: GGAATAAATGGAAATAGCAGCCCCCAGGAGTGTTAGGTAGAGGCACCCTCTAGAGAGTACTGGAGACCAGAGAGGTGAGACAATCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp GATTCAGCACATCATCTCGCACTGACTACAGAAAATGTAGTCCTCTaGCCAGGGCCTTGGATGAGCCACTGTATGGTGTATGCTCCTGGT +
Preference number: 1 (lower is better)
Translates to: DSAHHLALTTENVVL*PGPWMSHCMVYAPG
Trigger: ACCAGGAGCATACACCATACAGTGGCTCATCCAAGGCCCTGGGCAGAGGACTACATTTTCTGTAGTCAGTGCGAGATGATGTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp TTCCAATGGTTGGCTGTGAACATCCACATTGTATTGGTCAGACTCTaGAAGATCCTCTCAGGGGACAGCCATACCAGGCTCCTGTCAGCA +
Preference number: 1 (lower is better)
Translates to: FQWLAVNIHIVLVRL*KILSGDSHTRLLSA
Trigger: TGCTGACAGGAGCCTGGTATGGCTGTCCCCTGAGAGGATCTTCCAGAGTCTGACCAATACAATGTGGATGTTCACAGCCAACCATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp CTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATTaGATTTCCTTTCCTTCAGTCTCTTCTCTATTTTTGTCCCTCCAG +
Preference number: 1 (lower is better)
Translates to: LPLPAMRWIQSWASH*ISFPSVSSLFLSLQ
Trigger: CTGGAGGGACAAAAATAGAGAAGAGACTGAAGGAAAGGAAATCCAATGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp GCAGATAGAGCCAACCATTGGACTGAAGTTGGGGACCCCTTTGGTTaGATAAGGGAAGGATTGAAGAAGCTGAAAGGGAGAACAACCCTT +
Preference number: 1 (lower is better)
Translates to: ADRANHWTEVGDPFG*IREGLKKLKGRTTL
Trigger: AAGGGTTGTTCTCCCTTTCAGCTTCTTCAATCCTTCCCTTATTCAACCAAAGGGGTCCCCAACTTCAGTCCAATGGTTGGCTCTATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp TGTAGCCCCATCCCTCAACCAAGGGAAGTGCCTAACAGGAGGATATaGTCTCTACAGGTCCTTTGCTTCCCTTTGTTGGATATTTTAACT +
Preference number: 1 (lower is better)
Translates to: CSPIPQPREVPNRRI*SLQVLCFPLLDILT
Trigger: AGTTAAAATATCCAACAAAGGGAAGCAAAGGACCTGTAGAGACCATATCCTCCTGTTAGGCACTTCCCTTGGTTGAGGGATGGGGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp ATGGGAAGAGCTACAAAGACCCACAGTAGGAAAACATGCAAAGAGTaGGAGACTTTGGGCCTCTCAGTCCTATATTGGAGGTCTCCATTA +
Preference number: 1 (lower is better)
Translates to: MGRATKTHSRKTCKE*ETLGLSVLYWRSPL
Trigger: TAATGGAGACCTCCAATATAGGACTGAGAGGCCCAAAGTCTCTCACTCTTTGCATGTTTTCCTACTGTGGGTCTTTGTAGCTCTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp CCCTCTACCTCTTGTGATTATTCTGTTTCCCCTTCTAAGAAGGACTaGAGCATCCATACTTTGGTCTTCCTTCTTGAGTTTCACAGGTTG +
Preference number: 1 (lower is better)
Translates to: PSTSCDYSVSPSKKD*SIHTLVFLLEFHRL
Trigger: CAACCTGTGAAACTCAAGAAGGAAGACCAAAGTATGGATGCTTCAGTCCTTCTTAGAAGGGGAAACAGAATAATCACAAGAGGTAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp GACCTGTCGGTCTCTGTATCAATACCTCAGGGTTTTAATCAGTATTaGTTTGTAGTACAGCTTGAGATCAGGTGTTGTGATTTCCCCCAA +
Preference number: 1 (lower is better)
Translates to: DLSVSVSIPQGFNQY*FVVQLEIRCCDFPQ
Trigger: TTGGGGGAAATCACAACACCTGATCTCAAGCTGTACTACAAAGCAATACTGATTAAAACCCTGAGGTATTGATACAGAGACCGACAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp CTGAAGAATAGCTGCCAAGGTTGTCTCCTGGCCACAATGTGTACATaGACACACCTCCTTTGTGCACATGTATACAAGAATACACATATT +
Preference number: 1 (lower is better)
Translates to: LKNSCQGCLLATMCT*THLLCAHVYKNTHI
Trigger: AATATGTGTATTCTTGTATACATGTGCACAAAGGAGGTGTGTTCATGTACACATTGTGGCCAGGAGACAACCTTGGCAGCTATTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp AAGTACAGAAGAGACACACTATTAGAGCATAAGGTGAATGGTATCTaGAGAATAGCTGCCAAGGTTGTCTCCTGGCCACAATGTGTACAT +
Preference number: 1 (lower is better)
Translates to: KYRRDTLLEHKVNGI*RIAAKVVSWPQCVH
Trigger: ATGTACACATTGTGGCCAGGAGACAACCTTGGCAGCTATTCTTCAGATACCATTCACCTTATGCTCTAATAGTGTGTCTCTTCTGTACTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp CCAAAATTCTCTCTTCCAATGTGGAAGCAGTTTCACTGTGCCATGTaGTTCTGGTCTATCATGTCTAATGGAGATCTTCTGTACTTTTTG +
Preference number: 1 (lower is better)
Translates to: PKFSLPMWKQFHCAM*FWSIMSNGDLLYFL
Trigger: CAAAAAGTACAGAAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTTCCACATTGGAAGAGAGAATTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp TGCTCCACTATGTTCTTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAATCCAGATGCCCCTCAACAGAGGAATGGATACAAAAA +
Preference number: 1 (lower is better)
Translates to: CSTMFLAALFIIARS*KESRCPSTEEWIQK
Trigger: TTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGATTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAAGAACATAGTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp ATTGAAGCCTCCTCACTTGGGCATTTCTGCTTCTTACATTTCTTATaGTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATA +
Preference number: 1 (lower is better)
Translates to: IEASSLGHFCFLHFL*SVGCTLGILCSWLI
Trigger: TATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGACCATAAGAAATGTAAGAAGCAGAAATGCCCAAGTGAGGAGGCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp AGGTTGTCTCCTGGCCACAATGTGTACATGAACACACCTCCTTTGTaGACATGTATACAAGAATACACATATTCAAAAATCCCATATTGT +
Preference number: 1 (lower is better)
Translates to: RLSPGHNVYMNTPPL*TCIQEYTYSKIPYC
Trigger: ACAATATGGGATTTTTGAATATGTGTATTCTTGTATACATGTGCACAAAGGAGGTGTGTTCATGTACACATTGTGGCCAGGAGACAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp CTTACAGAAGCAGTTCAGTTTCATAAGGTCCCATTTGTTAACTGTTaGTCTTTGAGCCTGAGGCATTGGTATTCAGTTCATGAAAATTTC +
Preference number: 1 (lower is better)
Translates to: LTEAVQFHKVPFVNC*SLSLRHWYSVHENF
Trigger: GAAATTTTCATGAACTGAATACCAATGCCTCAGGCTCAAAGATCAACAGTTAACAAATGGGACCTTATGAAACTGAACTGCTTCTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 90 bp CAAGATGGCCATTTTCACTGTGTTAATCTTACCTATCCAAGAGCATaGGAGCTCTTTCCATCTTCAGATGTCTTCTTCTATTTCTTTTTA +
Preference number: 1 (lower is better)
Translates to: QDGHFHCVNLTYPRA*ELFPSSDVFFYFFL
Trigger: TAAAAAGAAATAGAAGAAGACATCTGAAGATGGAAAGAGCTCCCATGCTCTTGGATAGGTAAGATTAACACAGTGAAAATGGCCATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp GACAGCATTTTCAACAAATGGTGCTGGCACAACTGTTGGTTATCATaGAGAAGAATTCGAATTGATCTATTCCTATCTTCTTGTACTAAG +
Preference number: 1 (lower is better)
Translates to: DSIFNKWCWHNCWLS*RRIRIDLFLSSCTK
Trigger: CTTAGTACAAGAAGATAGGAATAGATCAATTCGAATTCTTCTTCATGATAACCAACAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp GGTTGCTTATGTATAGTATCATATCATCAGCAAATAGTGATACTTTaGCTGCCTTCTAATTGGTATCCCCTTGATATCTGTTTGTTGTCT +
Preference number: 1 (lower is better)
Translates to: GCLCIVSYHQQIVIL*LPSNWYPLDICLLS
Trigger: AGACAACAAACAGATATCAAGGGGATACCAATTAGAAGGCAGTCAAAGTATCACTATTTGCTGATGATATGATACTATACATAAGCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 90 bp TGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAGTaGGCATATATCATGAATGTACTTTGTGTTATGAGTTACCTCACT +
Preference number: 1 (lower is better)
Translates to: CTLGILCSWLIYTYQ*AYIMNVLCVMSYLT
Trigger: AGTGAGGTAACTCATAACACAAAGTACATTCATGATATATGCTCACTGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 90 bp TCAATATATGGTTCTGGTTTAACTAGATGTCTTCATGTGAATGAATaGAATAGAACCATATTTTTCACCCTGCACAAAACTCAAGCCCAA +
Preference number: 1 (lower is better)
Translates to: SIYGSGLTRCLHVNE*NRTIFFTLHKTQAQ
Trigger: TTGGGCTTGAGTTTTGTGCAGGGTGAAAAATATGGTTCTATTGCATTCATTCACATGAAGACATCTAGTTAAACCAGAACCATATATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCACAGTCTAGGTGTCATTaGAGCCTCCTCACTTGGGCA +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPQSRCH*SLLTWA
Trigger: TGCCCAAGTGAGGAGGCTTCAATGACACCTAGACTG...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGAGCATCCTCTCAGATaGAAGGGTGAGGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPEHPLR*KGEEEG
Trigger: TCCTTCCTCCTCACCCTTGCATCTGAGAGGATGCTC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGGTGTCAGGCCTTGCCTaGCCCCACTCCCACTCCCTG +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLVSGLA*PHSHSL
Trigger: CAGGGAGTGGGAGTGGGGGCAGGCAAGGCCTGACAC...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAATGCTGGTGAGGATGTaGAAAAAGAGGAGCACTCCT +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPMLVRM*KKRSTP
Trigger: AGGAGTGCTCCTCTTTTTCCACATCCTCACCAGCAT...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATTCCATCCATTTGCCTaGCAAATCCATGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPFHPFA*QIHDVL
Trigger: GAGGACATCATGGATTTGGCAGGCAAATGGATGGAA...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAACCTATCCAAGAGCATaGGAGCTCTTTCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPTYPRA*ELFPSS
Trigger: TGAAGATGGAAAGAGCTCCCATGCTCTTGGATAGGT...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CTCACTATCTCTTCCCACAGTTCCTCATCCCATTCCTCCTCCTCCTaGCCTCCAAGAGGGTGCTCTCTACCCTACCAGGTCTATCCTAGG +
Preference number: 2 (lower is better)
Translates to: LTISSHSSSSHSSSS*PPRGCSLPYQVYPR
Trigger: CCTAGGATAGACCTGGTAGGGTAGAGAGCACCCTCTTGGAGGCAAGGAGGAGGAGGAATGGGATGAGGAACTGTGGGAAGAGATAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp TCCTACAGGTTTACCATCCATTGGGTCCCCTGGGGTTCTAGATCTTaGCTCGACTGGAGACCAGCCTGTCTGTGTGCAGTTCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: SYRFTIHWVPWGSRS*LDWRPACLCAVHCL
Trigger: GAGGCAGTGAACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATGGATGGTAAACCTGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAGGTGGGGCAATCTCTaGATGGCCTTTCCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLRWGNL*MAFPSV
Trigger: GACTGAAGGAAAGGCCATTCAGAGATTGCCCCACCT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGAAGACATTTTACACTaGGTGTTCATTGTGAGGTGT +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPEDILH*VFIVRC
Trigger: ACACCTCACAATGAACACTCAGTGTAAAATGTCTTC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTTCCAAAAAGTGGGAGTaGGTGGGTAAGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSSKKWE*VGKGVG
Trigger: CCCCACTCCCTTACCCACCCACTCCCACTTTTTGGA...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCACTGAGAATTGACAAATaGGACCTCATGAAACTGCTA +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPLRIDK*DLMKLL
Trigger: TAGCAGTTTCATGAGGTCCCATTTGTCAATTCTCAG...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGAAGCATCCATACTTTaGTCTTCCTTCTTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPEASIL*SSFLSF
Trigger: GAAACTCAAGAAGGAAGACCAAAGTATGGATGCTTC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGTGTTCATATGTATATaGGTTTACTTCCGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPVFICI*VYFRGF
Trigger: GAAACCCCGGAAGTAAACCCATATACATATGAACAC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGGCCACAATGTGTACATaGACACACCTCCTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLATMCT*THLLCA
Trigger: TGCACAAAGGAGGTGTGTTCATGTACACATTGTGGC...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAGCCATTGCCAACACTaGTTGGGTAGTCAAGAACCT +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLSHCQH*LGSQEP
Trigger: AGGTTCTTGACTACCCAAGCAGTGTTGGCAATGGCT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGCAAGACTGGCTCACTTaGGGAAAAACATTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLQDWLT*GKTLLC
Trigger: GCAGAGCAATGTTTTTCCCCAAGTGAGCCAGTCTTG...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATGTGAAGAATTGTGTTaGAATTTTGATGGAGATTGC +
Preference number: 2 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPCEELC*NFDGDC
Trigger: GCAATCTCCATCAAAATTCCAACACAATTCTTCACA...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp GTGAGGATGTGGAAAAAGAGGAGCACTCCTCCATTGTTGGTGGGATaGCAAGCTTGTACAACCACTGTGGAAATCAGTCTGGCGGTTCCT +
Preference number: 2 (lower is better)
Translates to: VRMWKKRSTPPLLVG*QACTTTVEISLAVP
Trigger: AGGAACCGCCAGACTGATTTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCCACATCCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CGGATGCTGGTGAGGATGTGGAAAAAGAGGAGCACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTGTGGAAATCAGTCTG +
Preference number: 2 (lower is better)
Translates to: RMLVRMWKKRSTPPL*VGLQACTTTVEISL
Trigger: CAGACTGATTTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCCACATCCTCACCAGCATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGATGGAGGAACCTAGGTaGGATAGAGTGAAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLMEEPR*DRVKGK
Trigger: TTTTCCCTTCACTCTATCTCACCTAGGTTCCTCCAT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGGAGGAATACCTGAAATaGCTGAGAAGCACCTGGAAA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLEEYLK*LRSTWK
Trigger: TTTCCAGGTGCTTCTCAGCCATTTCAGGTATTCCTC...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp ACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATaGGATTTCCTTTCCTTCAGTCTCTTCTCTATTTTTGTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: TPTPCHEMDPKLGQP*DFLSFSLFSIFVPP
Trigger: TGGAGGGACAAAAATAGAGAAGAGACTGAAGGAAAGGAAATCCAATGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TCCCCCTGCTACATAGCTCCATTCAATTTCCTGACCCTCTGTACTTGTCCACCAACATACTCCATGAGATaGAGCCATTGCCAACACTGC +
Preference number: 2 (lower is better)
Translates to: SPCYIAPFNFLTLCTCPPTYSMR*SHCQHC
Trigger: GCAGTGTTGGCAATGGCTTCATCTCATGGAGTATGT...TGGTGGACAAGTACAGAGGGTCAGGAAATTGAATGGAGCTATGTAGCAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGTTAAAGCCATATTCCTaGGGACATCAGTTCCACAAC +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLLKPYS*GHQFHN
Trigger: GTTGTGGAACTGATGTCCTCAGGAATATGGCTTTAA...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTGCCCAGGGCCTTGGATaGGCCACTGTATGGTGTATG +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLAQGLG*ATVWCM
Trigger: CATACACCATACAGTGGCTCATCCAAGGCCCTGGGC...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TCCCCCTGCTACATAGCTCCATTCAATTTCCTGACCCTCTGTACTTGTCCACCAGAGCAGTATCAGGTATaGGAGGAGATAGTGGACAAG +
Preference number: 2 (lower is better)
Translates to: SPCYIAPFNFLTLCTCPPEQYQV*EEIVDK
Trigger: CTTGTCCACTATCTCCTCCCATACCTGATACTGCTC...TGGTGGACAAGTACAGAGGGTCAGGAAATTGAATGGAGCTATGTAGCAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTAGGACTCATGGATTGTaGAGGCCTGGTGGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLRTHGL*RPGGVG
Trigger: CCCTACCCCACCAGGCCTCCACAATCCATGAGTCCT...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGATTTATGCCCAAGAGTaGTATAGCTGGATCTTCAGG +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLIYAQE*YSWIFR
Trigger: CCTGAAGATCCAGCTATACCACTCTTGGGCATAAAT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp GTGGAAAAAGAGGAGCACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTGTGGAAATCAGTCTGGCGGTTCCTCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VEKEEHSSIVGGIAS*YNHCGNQSGGSSEN
Trigger: ATTTTCTGAGGAACCGCCAGACTGATTTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTAAATCAAAACAACCCTaGGATTTCACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSKSKQP*DFTSHQ
Trigger: CTGGTGTGAGGTGAAATCTCAGGGTTGTTTTGATTT...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAAACACAGAAATGGATaGTCACAGTCAGCTATTGGA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLKHRNG*SQSAIG
Trigger: TCCAATAGCTGACTGTGAGCATCCATTTCTGTGTTT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGATATGTATCAAAAGATaGCCTAGTCTGCCATCACTG +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLICIKR*PSLPSL
Trigger: CAGTGATGGCAGACTAGGCCATCTTTTGATACATAT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CTTCCCATAACTCCTCCACTGGGATCCTTGTTCTCATTCCAATGGTaGGCTGTGAACATCCACATTGTATTGGTCAGACTCTGGAAGATC +
Preference number: 2 (lower is better)
Translates to: LPITPPLGSLFSFQW*AVNIHIVLVRLWKI
Trigger: GATCTTCCAGAGTCTGACCAATACAATGTGGATGTTCACAGCCAACCATTGGAATGAGAACAAGGATCCCAGTGGAGGAGTTATGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTATAGGATCAGGAAATTaGATGGAGATATGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSIGSGN*MEICSR
Trigger: CCTGCTACATATCTCCATTCAATTTCCTGATCCTAT...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTTTTGGTCTTCCTTCTTaGGTTTCACAGGTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSFGLPS*VSQVEF
Trigger: AAACTCAACCTGTGAAACTCAAGAAGGAAGACCAAA...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTGAAAATGTAGTCCTCTaGCCAGGGCCTTGGATGAGC +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLENVVL*PGPWMS
Trigger: GCTCATCCAAGGCCCTGGGCAGAGGACTACATTTTC...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAGACAAGTAGACCAATaGAATAGAATTGAAGACCCA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLRQVDQ*NRIEDP
Trigger: TGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGTTGAGCCTGAGGCATTaGTATTCAGTTCATGAAAAT +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLLSLRH*YSVHEN
Trigger: ATTTTCATGAACTGAATACCAATGCCTCAGGCTCAA...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp TCCCCCTGCTACATAGCTCCATTCAATTTCCTGACCCTCTGTACTTGTCCACCATCTCTAACTCAAAGATaGTCTTCCTCAGATAACCAG +
Preference number: 2 (lower is better)
Translates to: SPCYIAPFNFLTLCTCPPSLTQR*SSSDNQ
Trigger: CTGGTTATCTGAGGAAGATCATCTTTGAGTTAGAGA...TGGTGGACAAGTACAGAGGGTCAGGAAATTGAATGGAGCTATGTAGCAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGCCCAGTACTAGGAATTaGTTACACTTAATTGAGATA +
Preference number: 2 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLPSTRN*LHLIEI
Trigger: TATCTCAATTAAGTGTAAGCAATTCCTAGTACTGGG...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp GTGCCTAACAGGAGGATATGGTCTCTACAGGTCCTTTGCTTCCCTTaGTTGGATATTTTAACTAATGTCAGCCCCGTTAGATCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: VPNRRIWSLQVLCFP*LDILTNVSPVRSWK
Trigger: CTTCCAAGATCTAACGGGGCTGACATTAGTTAAAATATCCAACAAAGGGAAGCAAAGGACCTGTAGAGACCATATCCTCCTGTTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAGACAGCGGATGCTGGTaGGGATGTGGAAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSDSGCW*GCGKRG
Trigger: TCCTCTTTTTCCACATCCTCACCAGCATCCGCTGTC...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTGGGGGTCTGGTTATTTaGTATTGTTCTCCTATGGGG +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLGGLVI*YCSPMG
Trigger: CCCCATAGGAGAACAATATCAAATAACCAGACCCCC...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTGTCAAGGTTATTCTTTaGTCTCCAAAAACTGATGTT +
Preference number: 2 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSVKVIL*SPKTDV
Trigger: AACATCAGTTTTTGGAGAGCAAAGAATAACCTTGAC...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCACTGGTGCAAGGCTCCTaGCACATAAGTAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSLVQGS*HISSRG
Trigger: ACCTCTGCTACTTATGTGCCAGGAGCCTTGCACCAG...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCACAGAGACCTGGGAAGTaGGACACTTTCAGGACTCAT +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSQRPGK*DTFRTH
Trigger: ATGAGTCCTGAAAGTGTCTCACTTCCCAGGTCTCTG...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAATTGCCTCCAAGAGGGTaGTCTCTACCCTACCAGGTC +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQLPPRG*SLPYQV
Trigger: GACCTGGTAGGGTAGAGAGCACCCTCTTGGAGGCAA...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp AGAAGAATGAAGAGCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: RRMKSKVWTLCPFLE*GTKHPWKELQRQSL
Trigger: CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGCTCTTCATTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTCATGAGACAATTTCCTaGACAGAACAATGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLHETIS*TEQWLR
Trigger: TCTGAGCCATTGTTCTGTTCAGGAAATTGTCTCATG...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAAGCCCCGTTAGATCTTaGAAGCCTCTTGCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSSPVRS*KPLAFL
Trigger: CAGAAAAGCAAGAGGCTTCCAAGATCTAACGGGGCT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTTATTATGGCCCTTCCTaGAATTCCCTCTTCAAACCT +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLYYGPS*NSLFKP
Trigger: AGGTTTGAAGAGGGAATTCCAGGAAGGGCCATAATA...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAAGGATCATACATGAGCTaGTGCAAGGCTCCTGGCACA +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQGSYMS*CKAPGT
Trigger: TGTGCCAGGAGCCTTGCACCAGCTCATGTATGATCC...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAACACCTATGGTCACTTaGTCTTTGACAAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSTPMVT*SLTREL
Trigger: TAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCATGGAATCACCATGCCTaGCCTAAAGCTTTACTACAG +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSWNHHA*PKALLQ
Trigger: CTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCA...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp GGTAGCAGCAAAGAACAGGAAAAGATAGGAGAATCCCTATCTGGTAGACTCGTACAGAAAGAGCAATTATaGTGTACAATGGACTTGAGA +
Preference number: 2 (lower is better)
Translates to: GSSKEQEKIGESLSGRLVQKEQL*CTMDLR
Trigger: TCTCAAGTCCATTGTACAGCATAATTGCTCTTTCTG...TACGAGTCTACCAGATAGGGATTCTCCTATCTTTTCCTGTTCTTTGCTGCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAATAATAGCCAGAAGCTaGAAAGAATCCAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSIIARS*KESRCP
Trigger: GGGGCATCTGGATTCTTTCCAGCTTCTGGCTATTAT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTAGGCCACCAAAAGATTaGGAAAGGATCTTTACCTAT +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLRPPKD*ERIFTY
Trigger: ATAGGTAAAGATCCTTTCCCAATCTTTTGGTGGCCT...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTGCATTTCAAATATTATaGCCCTTCCTGGAATTCCCT +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLAFQIL*PFLEFP
Trigger: AGGGAATTCCAGGAAGGGCCATAATATTTGAAATGC...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAAGTTGGGGACCCCTTTaGTTGAATAAGGGAAGGATT +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSSWGPL*LNKGRI
Trigger: AATCCTTCCCTTATTCAACCAAAGGGGTCCCCAACT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CCAAGGTTGTCTCCTGGCCACAATGTGTACATGAACACACCTCCTTaGTGCACATGTATACAAGAATACACATATTCAAAAATCCCATAT +
Preference number: 2 (lower is better)
Translates to: PRLSPGHNVYMNTPP*CTCIQEYTYSKIPY
Trigger: ATATGGGATTTTTGAATATGTGTATTCTTGTATACATGTGCACAAAGGAGGTGTGTTCATGTACACATTGTGGCCAGGAGACAACCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp ATGTATATGGGTTTACTTCCGGGGTTTCGATTCATATTCCATTGTTaGACCTGTCGGTCTCTGTATCAATACCTCAGGGTTTTAATCAGT +
Preference number: 2 (lower is better)
Translates to: MYMGLLPGFRFIFHC*TCRSLYQYLRVLIS
Trigger: ACTGATTAAAACCCTGAGGTATTGATACAGAGACCGACAGGTCAAACAATGGAATATGAATCGAAACCCCGGAAGTAAACCCATATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAATTGAAGACCCAGAAATaGACCCACACACCTATGGTC +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQLKTQK*THTPMV
Trigger: GACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAA...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAACTCCATTCAATTTCCTaGCCCTCTGTACTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQLHSIS*PSVLVH
Trigger: GTGGACAAGTACAGAGGGTCAGGAAATTGAATGGAG...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTAACACACCTCCTTTGTaGACATGTATACAAGAATAC +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLNTPPL*TCIQEY
Trigger: GTATTCTTGTATACATGTGCACAAAGGAGGTGTGTT...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTAGTAAGAAAGACACATaGTCCACTATGTTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLSKKDT*STMFLA
Trigger: TGCTAAGAACATAGTGGAGCATGTGTCTTTCTTACT...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAATCTTGGAAGCCTCTTaGTTTTCTGTCATATGGGAC +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSILEAS*FSVIWD
Trigger: GTCCCATATGACAGAAAAGCAAGAGGCTTCCAAGAT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAACTTTCCTTCAGTCTCTaGTCTACCCTTTTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQLSFSL*STLLSL
Trigger: CAGGGACAAAAGGGTAGAGCAGAGACTGAAGGAAAG...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CATTGTGAGGTGTGTTGTTTCCCTAATTTCTTTCTCAGCACCATTTATCATTTGGAAAGGACCCAGAAATaGCTGTCTCTTGTGAGACTA +
Preference number: 2 (lower is better)
Translates to: HCEVCCFPNFFLSTIYHLERTQK*LSLVRL
Trigger: TAGTCTCACAAGAGACAGCCATTTCTGGGTCCTTTC...CAAATGATAAATGGTGCTGAGAAAGAAATTAGGGAAACAACACACCTCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAAAACTGCTAAGCTTCTaGAAGGCAAAAGACACCATC +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSKLLSF*KAKDTI
Trigger: GATGGTGTCTTTTGCCTTCCAGAAGCTTAGCAGTTT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CATTGTGAGGTGTGTTGTTTCCCTAATTTCTTTCTCAGCACCATTTATCATTTGATATTTAAGGACTCATaGATTGTGGAGGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: HCEVCCFPNFFLSTIYHLIFKDS*IVEAWW
Trigger: CCACCAGGCCTCCACAATCCATGAGTCCTTAAATAT...CAAATGATAAATGGTGCTGAGAAAGAAATTAGGGAAACAACACACCTCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CTCACTTGGGCATTTCTGCTTCTTACATTTCTTATGGTCTGTAGGTaGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCA +
Preference number: 2 (lower is better)
Translates to: LTWAFLLLTFLMVCR*YPRYSVFLANIHLS
Trigger: TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGACCATAAGAAATGTAAGAAGCAGAAATGCCCAAGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTCTTATCTGGTCACAGTaGGAGAAAATGTACTTAATA +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLLIWSQ*EKMYLI
Trigger: TATTAAGTACATTTTCTCCCACTGTGACCAGATAAG...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp CATTGTGAGGTGTGTTGTTTCCCTAATTTCTTTCTCAGCACCATTTATCATTTGAAAATACCAGAGACCTaGGAAGTGAGACACTTTCAG +
Preference number: 2 (lower is better)
Translates to: HCEVCCFPNFFLSTIYHLKIPET*EVRHFQ
Trigger: CTGAAAGTGTCTCACTTCCCAGGTCTCTGGTATTTT...CAAATGATAAATGGTGCTGAGAAAGAAATTAGGGAAACAACACACCTCACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTGAGATTCAGTGTATTTaGTTTTATGTAGAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLEIQCI*FYVEVL
Trigger: AAGGACCTCTACATAAAACCAAATACACTGAATCTC...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp GGCATTGGTATTCAGTTCATGAAAATTTCCTCTGTGCCAATGAGGTaGAGACTTTTCTACTTTCTCTTTCATGAGATTCAGTGTATTTGG +
Preference number: 2 (lower is better)
Translates to: GIGIQFMKISSVPMR*RLFYFLFHEIQCIW
Trigger: CCAAATACACTGAATCTCATGAAAGAGAAAGTAGAAAAGTCTCAACCTCATTGGCACAGAGGAAATTTTCATGAACTGAATACCAATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp CCCTTCTGGTTCATACCTCCAATCTCCAACTTGGTAACTAAAATCTaGCCAACCTTTCTATTCTCTAAAATAATTAGCTCTAGCCACTTT +
Preference number: 2 (lower is better)
Translates to: PFWFIPPISNLVTKI*PTFLFSKIISSSHF
Trigger: AAAGTGGCTAGAGCTAATTATTTTAGAGAATAGAAAGGTTGGCAAGATTTTAGTTACCAAGTTGGAGATTGGAGGTATGAACCAGAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAAGTGAGGACTACTTTTaGATAACCTTAACATCGAGT +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSSEDYF*ITLTSS
Trigger: ACTCGATGTTAAGGTTATTCAAAAGTAGTCCTCACT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp CATTGTGAGGTGTGTTGTTTCCCTAATTTCTTTCTCAGCACCATTTATCATTTGAATACAAGGGCATCATaGATTTTGCAGGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: HCEVCCFPNFFLSTIYHLNTRAS*ILQAKG
Trigger: TCCTTTTGCCTGCAAAATTCATGATGCCCTTGTATT...CAAATGATAAATGGTGCTGAGAAAGAAATTAGGGAAACAACACACCTCACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAGGTACATTTACACAGTaGAGTACTACTCAGCTATTA +
Preference number: 2 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSGTFTQ*STTQLL
Trigger: TAATAGCTGAGTAGTACTCCACTGTGTAAATGTACC...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR TCA 90 bp CATTGTGAGGTGTGTTGTTTCCCTAATTTCTTTCTCAGCACCATTTATCATTTGCAAAGTTCACGATATTaGAAAGTACCATGCACACTA +
Preference number: 2 (lower is better)
Translates to: HCEVCCFPNFFLSTIYHLQSSRY*KVPCTL
Trigger: TAGTGTGCATGGTACTTTTCAATATCGTGAACTTTG...CAAATGATAAATGGTGCTGAGAAAGAAATTAGGGAAACAACACACCTCACAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR GCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAATCTCTACAGGTCCTTTaGTTCCCTTTGTTGGATATT +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQSLQVL*FPLLDI
Trigger: AATATCCAACAAAGGGAAGCAAAGGACCTGTAGAGA...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAACCCTCAACAGAAGAATaGATACAGGAAATCTGGTTT +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQPSTEE*IQEIWF
Trigger: AAACCAGATTTCCTGTATCCATTCTTCTGTTGAGGG...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 90 bp ACATTTCTTATGGTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTaGGCTAATATACACTTATCAGTGAGCATATATCATGAATGTACT +
Preference number: 2 (lower is better)
Translates to: TFLMVCRLYPRYSVF*ANIHLSVSIYHECT
Trigger: AGTACATTCATGATATATGCTCACTGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGACCATAAGAAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CCA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAAGATCTTCCACTTGCTTaGTATGATTTACATGAAGAC +
Preference number: 2 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQDLPLA*YDLHED
Trigger: GTCTTCATGTAAATCATACCAAGCAAGTGGAAGATC...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGGGATTCCCCTTCCATaGATGCCAGATAAGGCAATC +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPGIPLP*MPDKAI
Trigger: GATTGCCTTATCTGGCATCAATGGAAGGGGAATCCC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATGCTGTAATGTGCCATaGATAGGAGCCTGTCATGGC +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPCCNVP*IGACHG
Trigger: GCCATGACAGGCTCCTATCAATGGCACATTACAGCA...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAGTAGAGCATGTGTCCTaGTGGTATAGTGGGGCATCT +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPVEHVS*WYSGAS
Trigger: AGATGCCCCACTATACCACAAGGACACATGCTCTAC...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAACCCTGTCCTTCCACTaGAGGTCTTGTCTGTCTACT +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPTLSFH*RSCLST
Trigger: AGTAGACAGACAAGACCTCAAGTGGAAGGACAGGGT...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp CTGCCCAGGGCCTTGGATGAGCCACTGTATGGTGTATaGTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCG +
Preference number: 3 (lower is better)
Translates to: LPRALDEPLYGV*SWLVAQSLGAS
Trigger: CGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATACAGTGGCTCATCCAAGGCCCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp CTTCCCACAGTTCCTCATCCCATTCCTCCTCCTCCTTaGCTCCAAGAGGGTGCTCTCTACCCTACCAGGTCT +
Preference number: 3 (lower is better)
Translates to: LPTVPHPIPPPP*LQEGALYPTRS
Trigger: AGACCTGGTAGGGTAGAGAGCACCCTCTTGGAGGCAAGGAGGAGGAGGAATGGGATGAGGAACTGTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CCTTGCCTGCCCCCACTCCCACTCCCTGCCATGAGATaGATCCAAAGTTGGGCCAGCCATTGGATTTCCTTT +
Preference number: 3 (lower is better)
Translates to: PCLPPLPLPAMR*IQSWASHWISF
Trigger: AAAGGAAATCCAATGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CATTGGGTCCCCTGGGGTTCTAGATCTTTGCTCGACTaGAGACCAGCCTGTCTGTGTGCAGTTCACTGCCTC +
Preference number: 3 (lower is better)
Translates to: HWVPWGSRSLLD*RPACLCAVHCL
Trigger: GAGGCAGTGAACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GTCTCACCTCTCTGGTCTCCAGTACTCTCTAGAGGGTaGCTCTACCTAACACTCCTGGGGGCTGCTATTTCC +
Preference number: 3 (lower is better)
Translates to: VSPLWSPVLSRG*LYLTLLGAAIS
Trigger: GGAAATAGCAGCCCCCAGGAGTGTTAGGTAGAGGCACCCTCTAGAGAGTACTGGAGACCAGAGAGGTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp TGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTaGTTCGCTGAGACTGCTGGTTTTCCTACGGGGTCA +
Preference number: 3 (lower is better)
Translates to: WCMLLVGSSVSG*FAETAGFPTGS
Trigger: TGACCCCGTAGGAAAACCAGCAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp GGATCACAGAAGCTTCCAGAGACTGAGCCTCCAACCTaGATCATACATGAGCTGGTGCAAGGCTCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: GSQKLPETEPPT*IIHELVQGSWH
Trigger: GTGCCAGGAGCCTTGCACCAGCTCATGTATGATCCAGGTTGGAGGCTCAGTCTCTGGAAGCTTCTGTGATCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp AGGGCCTTGGATGAGCCACTGTATGGTGTATGCTCCTaGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGA +
Preference number: 3 (lower is better)
Translates to: RALDEPLYGVCS*LVAQSLGASLR
Trigger: TCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATACAGTGGCTCATCCAAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAAACATCCACATTGTATaGGTCAGACTCTGGAAGATC +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPNIHIV*VRLWKI
Trigger: GATCTTCCAGAGTCTGACCAATACAATGTGGATGTT...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GAGACTATGCCCGGGCCTAGCAAACACAGAAATGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCC +
Preference number: 3 (lower is better)
Translates to: ETMPGPSKHRNG*SQSAIGWITGP
Trigger: GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCATTTCTGTGTTTGCTAGGCCCGGGCATAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GGTGGGGTGGGGGAAGACCAAGGCCTGAAACAACTTTaGTGTAATGTGCCATTGATAGGAGCCTGTCATGGC +
Preference number: 3 (lower is better)
Translates to: GGVGEDQGLKQL*CNVPLIGACHG
Trigger: GCCATGACAGGCTCCTATCAATGGCACATTACAGCAAAGTTGTTTCAGGCCTTGGTCTTCCCCCACCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp TTACCATCCATTGGGTCCCCTGGGGTTCTAGATCTTTaGTCGACTGGAGACCAGCCTGTCTGTGTGCAGTTC +
Preference number: 3 (lower is better)
Translates to: LPSIGSPGVLDL*STGDQPVCVQF
Trigger: GAACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATGGATGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp CTGCAGATGGGATGGATCCCTAGGTGGGGCAATCTCTaGATGGCCTTTCCTTCAGTCTCTGCTCTACCCTTT +
Preference number: 3 (lower is better)
Translates to: LQMGWIPRWGNL*MAFPSVSALPF
Trigger: AAAGGGTAGAGCAGAGACTGAAGGAAAGGCCATTCAGAGATTGCCCCACCTAGGGATCCATCCCATCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GATGGGTGTGTAGCCCCATCCCTCAACCAAGGGAAGTaGCTAACAGGAGGATATGGTCTCTACAGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: DGCVAPSLNQGK*LTGGYGLYRSF
Trigger: AAAGGACCTGTAGAGACCATATCCTCCTGTTAGGCACTTCCCTTGGTTGAGGGATGGGGCTACACACCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CAAGCACATCTTGGCATCAGCAATAGTATCTGGGTTTaGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: QAHLGISNSIWV*CLQMGWIPRWG
Trigger: GCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGATACTATTGCTGATGCCAAGATGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CTGACTACAGAAAATGTAGTCCTCTGCCCAGGGCCTTaGATGAGCCACTGTATGGTGTATGCTCCTGGTTGG +
Preference number: 3 (lower is better)
Translates to: LTTENVVLCPGP*MSHCMVYAPGW
Trigger: CCAACCAGGAGCATACACCATACAGTGGCTCATCCAAGGCCCTGGGCAGAGGACTACATTTTCTGTAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATCTGGTTATTTGATATaGTTCTCCTATGGGGTTGAA +
Preference number: 3 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPSGYLI*FSYGVE
Trigger: TTCAACCCCATAGGAGAACAATATCAAATAACCAGA...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GAAAGGACCCAGAAATGGCTGTCTCTTGTGAGACTATaGCCGGGCCTAGCAAACACAGAAATGGATGCTCAC +
Preference number: 3 (lower is better)
Translates to: ERTQKWLSLVRL*PGLANTEMDAH
Trigger: GTGAGCATCCATTTCTGTGTTTGCTAGGCCCGGGCATAGTCTCACAAGAGACAGCCATTTCTGGGTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp GCATCAGCAATAGTATCTGGGTTTGGTGTCTGCAGATaGGATGGATCCCTAGGTGGGGCAATCTCTGAATGG +
Preference number: 3 (lower is better)
Translates to: ASAIVSGFGVCR*DGSLGGAISEW
Trigger: CCATTCAGAGATTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGATACTATTGCTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TTCCTGGAATTCCCTCTTCAAACCTACCCTCCCTCCTaGTTCTATGAGGGAGCTCCCCCACCCAAAATTTAC +
Preference number: 3 (lower is better)
Translates to: FLEFPLQTYPPS*FYEGAPPPKIY
Trigger: GTAAATTTTGGGTGGGGGAGCTCCCTCATAGAATCAGGAGGGAGGGTAGGTTTGAAGAGGGAATTCCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp ATCTTGGCATCAGCAATAGTATCTGGGTTTGGTGTCTaGAGATGGGATGGATCCCTAGGTGGGGCAATCTCT +
Preference number: 3 (lower is better)
Translates to: ILASAIVSGFGV*RWDGSLGGAIS
Trigger: AGAGATTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGATACTATTGCTGATGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp AAGGGAGTGAAGAGGAGAGGGGAGCAGTATCAGGTATaGGAGGAGATAGTGGACAAGTACATAGGATCAGGA +
Preference number: 3 (lower is better)
Translates to: KGVKRRGEQYQV*EEIVDKYIGSG
Trigger: TCCTGATCCTATGTACTTGTCCACTATCTCCTCCCATACCTGATACTGCTCCCCTCTCCTCTTCACTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CCAACCTGGATCATACATGAGCTGGTGCAAGGCTCCTaGCACATAAGTAGCAGAGGTTTACCTTATCTGGTC +
Preference number: 3 (lower is better)
Translates to: PTWIIHELVQGS*HISSRGLPYLV
Trigger: GACCAGATAAGGTAAACCTCTGCTACTTATGTGCCAGGAGCCTTGCACCAGCTCATGTATGATCCAGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAAGGCCACCAAAAGATaGGGAAAGGATCTTTACCTA +
Preference number: 3 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLKATKR*GKDLYL
Trigger: TAGGTAAAGATCCTTTCCCAATCTTTTGGTGGCCTT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGATAGTGGGGCATCTTTaGAATTTATGCCCAAGAGTG +
Preference number: 3 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLIVGHL*NLCPRV
Trigger: CACTCTTGGGCATAAATTCAAAAGATGCCCCACTAT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp GCCAACCATTGGACTGAAGTTGGGGACCCCTTTGGTTaGATAAGGGAAGGATTGAAGAAGCTGAAAGGGAGA +
Preference number: 3 (lower is better)
Translates to: ANHWTEVGDPFG*IREGLKKLKGR
Trigger: TCTCCCTTTCAGCTTCTTCAATCCTTCCCTTATTCAACCAAAGGGGTCCCCAACTTCAGTCCAATGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp GCAGGAATTGGAGGCAAAGTGATGGAGGAACCTAGGTaGGATAGAGTGAAGGGAAAAGGGAACAGGTACAGA +
Preference number: 3 (lower is better)
Translates to: AGIGGKVMEEPR*DRVKGKGNRYR
Trigger: TCTGTACCTGTTCCCTTTTCCCTTCACTCTATCTCACCTAGGTTCCTCCATCACTTTGCCTCCAATTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GGAAAAAGAGGAGCACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTGTGGAAATCAGTCTGG +
Preference number: 3 (lower is better)
Translates to: GKRGALLHCWWD*KLVQPLWKSVW
Trigger: CCAGACTGATTTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp ATCCCTCAACCAAGGGAAGTGCCTAACAGGAGGATATaGTCTCTACAGGTCCTTTGCTTCCCTTTGTTGGAT +
Preference number: 3 (lower is better)
Translates to: IPQPREVPNRRI*SLQVLCFPLLD
Trigger: ATCCAACAAAGGGAAGCAAAGGACCTGTAGAGACCATATCCTCCTGTTAGGCACTTCCCTTGGTTGAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTCCAAAATGTCCAACATaGGGAAAAGGAACTTGGAAG +
Preference number: 3 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSPKCPT*GKGTWK
Trigger: CTTCCAAGTTCCTTTTCCCAATGTTGGACATTTTGG...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGGTCTCTTCTCTATTTTaGTCCCTCCAGTTCTTTAGA +
Preference number: 3 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLVSSLF*SLQFFR
Trigger: TCTAAAGAACTGGAGGGACAAAAATAGAGAAGAGAC...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp TATGGTGTATGCTCCTGGTTGGTAGCTCAGTCTCTGGGTGCTTCGCTGAGACTGAACATACAAAATACCTaGGATACAACCTACAGACTG +
Preference number: 3 (lower is better)
Translates to: YGVCSWLVAQSLGASLRLNIQNT*DTTYRL
Trigger: CAGTCTGTAGGTTGTATCCAAGGTATTTTGTATGTT...CAGTCTCAGCGAAGCACCCAGAGACTGAGCTACCAACCAGGAGCATACACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp GCTACAAAGACCCACAGTAGGAAAACATGCAAAGAGTaGGAGACTTTGGGCCTCTCAGTCCTATATTGGAGG +
Preference number: 3 (lower is better)
Translates to: ATKTHSRKTCKE*ETLGLSVLYWR
Trigger: CCTCCAATATAGGACTGAGAGGCCCAAAGTCTCTCACTCTTTGCATGTTTTCCTACTGTGGGTCTTTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TCAAGTCACCACAGGACTAAGGGATTCCCCTTCCATTaGTGCCAGATAAGGCAATCGATCCTCTGCTACATA +
Preference number: 3 (lower is better)
Translates to: SSHHRTKGFPFH*CQIRQSILCYI
Trigger: TATGTAGCAGAGGATCGATTGCCTTATCTGGCATCAATGGAAGGGGAATCCCTTAGTCCTGTGGTGACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp TGGCCTAGTCTGCCATCACTGAAAAGAGAGGCCCATTaGACGTGCAAACTTTATATGTTCCAGTACAGGGAA +
Preference number: 3 (lower is better)
Translates to: WPSLPSLKREAH*TCKLYMFQYRE
Trigger: TTCCCTGTACTGGAACATATAAAGTTTGCACGTCCAATGGGCCTCTCTTTTCAGTGATGGCAGACTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp GGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCTGCCATCACTGAAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GALDSSCICIKR*PSLPSLKREAH
Trigger: ATGGGCCTCTCTTTTCAGTGATGGCAGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp CACTGGGATCCTTGTTCTCATTCCAATGGTTGGCTGTaGACATCCACATTGTATTGGTCAGACTCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HWDPCSHSNGWL*TSTLYWSDSGR
Trigger: TCTTCCAGAGTCTGACCAATACAATGTGGATGTTCACAGCCAACCATTGGAATGAGAACAAGGATCCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp AGTCTGCCATCACTGAAAAGAGAGGCCCATTGGACGTaGAAACTTTATATGTTCCAGTACAGGGAAACGCTA +
Preference number: 3 (lower is better)
Translates to: SLPSLKREAHWT*KLYMFQYRETL
Trigger: TAGCGTTTCCCTGTACTGGAACATATAAAGTTTGCACGTCCAATGGGCCTCTCTTTTCAGTGATGGCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCATTaGATTTCCTTTCCTTCAGTCTCTTCTCTATTTTTG +
Preference number: 3 (lower is better)
Translates to: PAMRWIQSWASH*ISFPSVSSLFL
Trigger: CAAAAATAGAGAAGAGACTGAAGGAAAGGAAATCCAATGGCTGGCCCAACTTTGGATCCATCTCATGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp AGAGACACACTATTAGAGCATAAGGTGAATGGTATCTaGAGAATAGCTGCCAAGGTTGTCTCCTGGCCACAA +
Preference number: 3 (lower is better)
Translates to: RDTLLEHKVNGI*RIAAKVVSWPQ
Trigger: TTGTGGCCAGGAGACAACCTTGGCAGCTATTCTTCAGATACCATTCACCTTATGCTCTAATAGTGTGTCTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TTGGTAGTTTTCTCTAAGGTCATCCTAAATGAGTCCTaGGATTGTCTCACCTCTCTGGTCTCCAGTACTCTC +
Preference number: 3 (lower is better)
Translates to: LVVFSKVILNES*DCLTSLVSSTL
Trigger: GAGAGTACTGGAGACCAGAGAGGTGAGACAATCTCAGGACTCATTTAGGATGACCTTAGAGAAAACTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp TCTCTTCCAATGTGGAAGCAGTTTCACTGTGCCATGTaGTTCTGGTCTATCATGTCTAATGGAGATCTTCTG +
Preference number: 3 (lower is better)
Translates to: SLPMWKQFHCAM*FWSIMSNGDLL
Trigger: CAGAAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTTCCACATTGGAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTTCTGGGATAATATTTTaGAGATGGGTGTGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLSGIIF*RWVCSP
Trigger: GGGGCTACACACCCATCTCAAAAATATTATCCCAGA...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTTTCCATTTATTCCCATaGCCCTCTATGAGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLFHLFP*PSMSLS
Trigger: GGAGAGACTCATAGAGGGCAATGGGAATAAATGGAA...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AACATTCTATATAGATGCAAACAAGATGGGTATGGTAGGATGGAATTCAGACAAGGTGTATGCTCCTGGTaGGTAGCTCAGTCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: NILYRCKQDGYGRMEFRQGVCSW*VAQSLG
Trigger: ACCCAGAGACTGAGCTACCAACCAGGAGCATACACC...TTGTCTGAATTCCATCCTACCATACCCATCTTGTTTGCATCTATATAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp AAAATGGGGCTCAGAGCTAAACAAAGAATTCTTACCTaGGGAATACCTGAAATGGCTGAGAAGCACCTGGAA +
Preference number: 3 (lower is better)
Translates to: KMGLRAKQRILT*GIPEMAEKHLE
Trigger: TTCCAGGTGCTTCTCAGCCATTTCAGGTATTCCTCAGGTAAGAATTCTTTGTTTAGCTCTGAGCCCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp GTTTACTTCCGGGGTTTCGATTCATATTCCATTGTTTaGCCTGTCGGTCTCTGTATCAATACCTCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: VYFRGFDSYSIV*PVGLCINTSGF
Trigger: AAACCCTGAGGTATTGATACAGAGACCGACAGGTCAAACAATGGAATATGAATCGAAACCCCGGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp AACTGTAGAAGAATGAAGAGCAAAGTGTGGACACTTTaGCCCTTCTTAGAATTGGGAACAAAACACCCATGG +
Preference number: 3 (lower is better)
Translates to: NCRRMKSKVWTL*PFLELGTKHPW
Trigger: CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGCTCTTCATTCTTCTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp ATGTTCTTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAATCCAGATGCCCCTCAACAGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: MFLAALFIIARS*KESRCPSTEEW
Trigger: CCATTCCTCTGTTGAGGGGCATCTGGATTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CATACAAGGCCACTGCACTTGAGAATCCCCTCTTCATaGAAAATTAGATCTTGTAGTGCAGAATTGAGTGTG +
Preference number: 3 (lower is better)
Translates to: HTRPLHLRIPSS*KIRSCSAELSV
Trigger: CACACTCAATTCTGCACTACAAGATCTAATTTTCCATGAAGAGGGGATTCTCAAGTGCAGTGGCCTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CCAATGTGGAAGCAGTTTCACTGTGCCATGTGCTTCTaGTCTATCATGTCTAATGGAGATCTTCTGTACTTT +
Preference number: 3 (lower is better)
Translates to: PMWKQFHCAMCF*SIMSNGDLLYF
Trigger: AAAGTACAGAAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTTCCACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTCTAGAGGTAGACTTTTaGAGTATTCTTCCACCAGTG +
Preference number: 3 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLLEVDF*SILPPV
Trigger: CACTGGTGGAAGAATACTCAAAAAGTCTACCTCTAG...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp TCCTCACTTGGGCATTTCTGCTTCTTACATTTCTTATaGTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SSLGHFCFLHFL*SVGCTLGILCS
Trigger: AGAACACAGAATACCTAGGGTACAACCTACAGACCATAAGAAATGTAAGAAGCAGAAATGCCCAAGTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAACTTGGGGAAAAACATaGCTCTGCCCTGCAAATGAA +
Preference number: 3 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSTWGKT*LCPANE
Trigger: TTCATTTGCAGGGCAGAGCAATGTTTTTCCCCAAGT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTTTCTCTCCACTTAATTaGATGTTGACTGCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLFSPLN*MLTAVL
Trigger: CAAAACAGCAGTCAACATCAAATTAAGTGGAGAGAA...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR-3UTR CAA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTCCCCTTGATATCTGTTaGTTGTCTAATTGTTCTATC +
Preference number: 3 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLPLDIC*LSNCSI
Trigger: GATAGAACAATTAGACAACAAACAGATATCAAGGGG...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp GCAGTTCAGTTTCATAAGGTCCCATTTGTTAACTGTTaGTCTTTGAGCCTGAGGCATTGGTATTCAGTTCAT +
Preference number: 3 (lower is better)
Translates to: AVQFHKVPFVNC*SLSLRHWYSVH
Trigger: ATGAACTGAATACCAATGCCTCAGGCTCAAAGATCAACAGTTAACAAATGGGACCTTATGAAACTGAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp CCAAACTATATCACTCTTGGGAATATACTCAAAAGATaGCCCACCATACCACAAAGACACATGTTCAACCAT +
Preference number: 3 (lower is better)
Translates to: PNYITLGNILKR*PTIPQRHMFNH
Trigger: ATGGTTGAACATGTGTCTTTGTGGTATGGTGGGGCATCTTTTGAGTATATTCCCAAGAGTGATATAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp AACACCAGATTGATTTCCAGAGTGTTTATCCCAGTTTaGAATCCCACCAATGATGGAGGAATGTTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: NTRLISRVFIPV*NPTNDGGMFLF
Trigger: AAAAAGGAACATTCCTCCATCATTGGTGGGATTGCAAACTGGGATAAACACTCTGGAAATCAATCTGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp CTCAAAGATGATCTTCCTCAGATAACCAGTTGCAAATaGAATATTAGTTTTCTCCAAGACTGGCTCACTTGG +
Preference number: 3 (lower is better)
Translates to: LKDDLPQITSCK*NISFLQDWLTW
Trigger: CCAAGTGAGCCAGTCTTGGAGAAAACTAATATTTCATTTGCAACTGGTTATCTGAGGAAGATCATCTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TTTGCTCTCCAAAAACTGATGTTAAAGCCATATTCCTaGGGACATCAGTTCCACAACTCATTAAAACCGAGA +
Preference number: 3 (lower is better)
Translates to: FALQKLMLKPYS*GHQFHNSLKPR
Trigger: TCTCGGTTTTAATGAGTTGTGGAACTGATGTCCTCAGGAATATGGCTTTAACATCAGTTTTTGGAGAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TCTTGTGATTATTCTGTTTCCCCTTCTAAGAAGGACTaGAGCATCCATACTTTGGTCTTCCTTCTTGAGTTT +
Preference number: 3 (lower is better)
Translates to: SCDYSVSPSKKD*SIHTLVFLLEF
Trigger: AAACTCAAGAAGGAAGACCAAAGTATGGATGCTTCAGTCCTTCTTAGAAGGGGAAACAGAATAATCACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp ATAATTCAACCAAAGGGGTCACCAACTTCAGTCCAATaGATGGTTGTAAGTATATGCTTCTGTCTCATTCAG +
Preference number: 3 (lower is better)
Translates to: IIQPKGSPTSVQ*MVVSICFCLIQ
Trigger: CTGAATGAGACAGAAGCATATACTTACAACCATTCATTGGACTGAAGTTGGTGACCCCTTTGGTTGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp GTCTCTGTATCAATACCTCAGGGTTTTAATCAGTATTaGTTTGTAGTACAGCTTGAGATCAGGTGTTGTGAT +
Preference number: 3 (lower is better)
Translates to: VSVSIPQGFNQY*FVVQLEIRCCD
Trigger: ATCACAACACCTGATCTCAAGCTGTACTACAAAGCAATACTGATTAAAACCCTGAGGTATTGATACAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp TTTATTTATTTGCATTTCAAATATTATGGCCCTTCCTaGAATTCCCTCTTCAAACCTACCCTCCCTCCTGAT +
Preference number: 3 (lower is better)
Translates to: FIYLHFKYYGPS*NSLFKPTLPPD
Trigger: ATCAGGAGGGAGGGTAGGTTTGAAGAGGGAATTCCAGGAAGGGCCATAATATTTGAAATGCAAATAAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CATTTTCACTGTGTTAATCTTACCTATCCAAGAGCATaGGAGCTCTTTCCATCTTCAGATGTCTTCTTCTAT +
Preference number: 3 (lower is better)
Translates to: HFHCVNLTYPRA*ELFPSSDVFFY
Trigger: ATAGAAGAAGACATCTGAAGATGGAAAGAGCTCCCATGCTCTTGGATAGGTAAGATTAACACAGTGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CCA 72 bp CAGCTTCTTGCCAATGATCTAGTGTTCATATGTATATaGGTTTACTTCCGGGGTTTCGATTCATATTCCATT +
Preference number: 3 (lower is better)
Translates to: QLLANDLVFICI*VYFRGFDSYSI
Trigger: AATGGAATATGAATCGAAACCCCGGAAGTAAACCCATATACATATGAACACTAGATCATTGGCAAGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp TTAGAAGTTGGTAGCATTGATCTCTTACCTCAAAAGTaGCTAATGCCTGAGAATACAGATAGAAATTACTCC +
Preference number: 3 (lower is better)
Translates to: LEVGSIDLLPQK*LMPENTDRNYS
Trigger: GGAGTAATTTCTATCTGTATTCTCAGGCATTAGGCACTTTTGAGGTAAGAGATCAATGCTACCAACTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp AGATGCTTTACCCTAACAGTTCAAAGTTCACGATATTaGAAAGTACCATGCACACTATATGGAGAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: RCFTLTVQSSRY*KVPCTLYGEKV
Trigger: AACTTTCTCTCCATATAGTGTGCATGGTACTTTTCAATATCGTGAACTTTGAACTGTTAGGGTAAAGCATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp TGTATAGTATCATATCATCAGCAAATAGTGATACTTTaGCTGCCTTCTAATTGGTATCCCCTTGATATCTGT +
Preference number: 3 (lower is better)
Translates to: CIVSYHQQIVIL*LPSNWYPLDIC
Trigger: ACAGATATCAAGGGGATACCAATTAGAAGGCAGTCAAAGTATCACTATTTGCTGATGATATGATACTATACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp AGTAGAATTTCAGGGCTGTTTAGATTTGCAATTCTCTaGCAACTGAGGACTTTGAATATTTCTTTAAGTGCT +
Preference number: 3 (lower is better)
Translates to: SRISGLFRFAIL*QLRTLNISLSA
Trigger: AGCACTTAAAGAAATATTCAAAGTCCTCAGTTGTCAGAGAATTGCAAATCTAAACAGCCCTGAAATTCTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR TCA 72 bp CTACATAGAATTCTCAACAAAGGAATCTTGAACAACTaGGAAGCACTTAAAGAAATGTTCAAAGTGCCTAGT +
Preference number: 3 (lower is better)
Translates to: LHRILNKGILNN*EALKEMFKVPS
Trigger: ACTAGGCACTTTGAACATTTCTTTAAGTGCTTCTCAGTTGTTCAAGATTCCTTTGTTGAGAATTCTATGTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR GCA 72 bp TATCCAGAAGATGTTCCAACTAGTAAGAAAGACACATaGTCCACTATGTTCTTAGCAGCCTTATTTATAATA +
Preference number: 3 (lower is better)
Translates to: YPEDVPTSKKDT*STMFLAALFII
Trigger: TATTATAAATAAGGCTGCTAAGAACATAGTGGAGCATGTGTCTTTCTTACTAGTTGGAACATCTTCTGGATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCAAAAGGAGAAACAGATTaGCTAGGATTCCAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPKGETD*LGFQVQ
Trigger: CTGGACTTGGAATCCTAGCCAATCTGTTTCTCCTTT...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp CCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTaGGGCCAGCCATTGGATTTCCTTTCCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTPTPCHEMDPK*GQPLDFLSFSL
Trigger: GAGACTGAAGGAAAGGAAATCCAATGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GTGGGGTCTCTGAGGACAGTCATGCCAGGCTCCTCTTaGATAGCAGAACAGCACAATAGTGTCAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VGSLRTVMPGSS*IAEQHNSVRPC
Trigger: GCAAGGCCTGACACTATTGTGCTGTTCTGCTATCAAAGAGGAGCCTGGCATGACTGTCCTCAGAGACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GGACAGCCATACCAGGCTCCTGTCAGCAAGCACATCTaGGCATCAGCAATAGTATCTGGGTTTGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQPYQAPVSKHI*ASAIVSGFGVC
Trigger: GCAGACACCAAACCCAGATACTATTGCTGATGCCAAGATGTGCTTGCTGACAGGAGCCTGGTATGGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp TTTACCATCCATTGGGTCCCCTGGGGTTCTAGATCTTaGCTCGACTGGAGACCAGCCTGTCTGTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FTIHWVPWGSRS*LDWRPACLCAV
Trigger: AACTGCACACAGACAGGCTGGTCTCCAGTCGAGCAAAGATCTAGAACCCCAGGGGACCCAATGGATGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR CCA 90 bp CCTGCCCCCACTCCCACTCCCTGCCATGAGATGGATCCAAAGTTGGGCCAGCCACAAGAAACACATCTCTaGATATCGCCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PAPTPTPCHEMDPKLGQPQETHL*ISPLLK
Trigger: TTTTAACAGTGGCGATATCCAGAGATGTGTTTCTTG...TGGCTGGCCCAACTTTGGATCCATCTCATGGCAGGGAGTGGGAGTGGGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp ACTGACTACAGAAAATGTAGTCCTCTGCCCAGGGCCTaGGATGAGCCACTGTATGGTGTATGCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TDYRKCSPLPRA*DEPLYGVCSWL
Trigger: CAACCAGGAGCATACACCATACAGTGGCTCATCCAAGGCCCTGGGCAGAGGACTACATTTTCTGTAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GTGAGGATGTGGAAAAAGAGGAGCACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VRMWKKRSTPPL*VGLQACTTTVE
Trigger: TTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCCACATCCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp TCATTCCAATGGTTGGCTGTGAACATCCACATTGTATaGGTCAGACTCTGGAAGATCCTCTCAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SFQWLAVNIHIV*VRLWKILSGDS
Trigger: GCTGTCCCCTGAGAGGATCTTCCAGAGTCTGACCAATACAATGTGGATGTTCACAGCCAACCATTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR TCA 90 bp GGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAATGTGGCTGTTGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: GARESNQGAKGICNPIGGMWLLL*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCAACAGCCACAT...TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR TCA 90 bp TCATGGAGTGTGAGGTTGGGGGACCCTCTAGAAAATACCAGAGACCTGGGAAGTAGTCCAACCAGTACATaGCCACAAAGAATACTACCA +
Preference number: 4 (lower is better)
Translates to: SWSVRLGDPLENTRDLGSSPTST*PQRILP
Trigger: TGGTAGTATTCTTTGTGGTCATGTACTGGTTGGACT...ACTTCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp TGGAAAAAGAGGAGCACTCCTCCATTGTTGGTGGGATaGCAAGCTTGTACAACCACTGTGGAAATCAGTCTG +
Preference number: 4 (lower is better)
Translates to: WKKRSTPPLLVG*QACTTTVEISL
Trigger: CAGACTGATTTCCACAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGCTCCTCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GAAGACCCAGAAATGAACCCACACACCTATGGTCACTaGATCTTTGACAAGGGAGCTAAAACCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EDPEMNPHTYGH*IFDKGAKTIQW
Trigger: CCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp ACTCCTCCACTGGGATCCTTGTTCTCATTCCAATGGTaGGCTGTGAACATCCACATTGTATTGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: TPPLGSLFSFQW*AVNIHIVLVRL
Trigger: GAGTCTGACCAATACAATGTGGATGTTCACAGCCAACCATTGGAATGAGAACAAGGATCCCAGTGGAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp AATGAATGGAAATTAGCAGTTTCATGGAGTGTGAGGTaGGGGGACCCTCTAGAAAATACCAGAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: NEWKLAVSWSVR*GDPLENTRDLG
Trigger: TCCCAGGTCTCTGGTATTTTCTAGAGGGTCCCCCAACCTCACACTCCATGAAACTGCTAATTTCCATTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp AAGAGCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAGGAGTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: KSKVWTLCPFLE*GTKHPWKELQR
Trigger: TCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GGTTTACTTCCGGGGTTTCGATTCATATTCCATTGTTaGACCTGTCGGTCTCTGTATCAATACCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GLLPGFRFIFHC*TCRSLYQYLRV
Trigger: AACCCTGAGGTATTGATACAGAGACCGACAGGTCAAACAATGGAATATGAATCGAAACCCCGGAAGTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GAACAACATTATGAACTAACCAGTACCCCGGAGCTCTaGACTCTAGCTGCATATGTATCAAAAGATGGCCTA +
Preference number: 4 (lower is better)
Translates to: EQHYELTSTPEL*TLAAYVSKDGL
Trigger: TAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp AGGAGGATATGGTCTCTACAGGTCCTTTGCTTCCCTTaGTTGGATATTTTAACTAATGTCAGCCCCGTTAGA +
Preference number: 4 (lower is better)
Translates to: RRIWSLQVLCFP*LDILTNVSPVR
Trigger: TCTAACGGGGCTGACATTAGTTAAAATATCCAACAAAGGGAAGCAAAGGACCTGTAGAGACCATATCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp TATGGGTTTACTTCCGGGGTTTCGATTCATATTCCATaGTTTGACCTGTCGGTCTCTGTATCAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: YGFTSGVSIHIP*FDLSVSVSIPQ
Trigger: CTGAGGTATTGATACAGAGACCGACAGGTCAAACAATGGAATATGAATCGAAACCCCGGAAGTAAACCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR TCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTTGCTTGTGGTCAACATaGGTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLCLWST*VLQETH
Trigger: ATGTGTTTCTTGTAGGACTCATGTTGACCACAAGCA...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp AGGATATGGTCTCTACAGGTCCTTTGCTTCCCTTTGTaGGATATTTTAACTAATGTCAGCCCCGTTAGATCT +
Preference number: 4 (lower is better)
Translates to: RIWSLQVLCFPL*DILTNVSPVRS
Trigger: AGATCTAACGGGGCTGACATTAGTTAAAATATCCAACAAAGGGAAGCAAAGGACCTGTAGAGACCATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR GCA 90 bp AAGCAGTTTCACTGTGCCATGTGCTTCTGGTCTATCATGTCTAATGGAGATCTTCTCTTATGTGGCTGTTaGTATGAAGATGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: KQFHCAMCFWSIMSNGDLLLCGC*YEDACI
Trigger: AATGCAAGCATCTTCATAGCAACAGCCACATAAGAG...AAGATCTCCATTAGACATGATAGACCAGAAGCACATGGCACAGTGAAACTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GAAATAGTTCTACCTGAAGTCCAAACTATATCACTCTaGGGAATATACTCAAAAGATGCCCCACCATACCAC +
Preference number: 4 (lower is better)
Translates to: EIVLPEVQTISL*GIYSKDAPPYH
Trigger: GTGGTATGGTGGGGCATCTTTTGAGTATATTCCCAAGAGTGATATAGTTTGGACTTCAGGTAGAACTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp ATGGTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTaGGCTAATATACACTTATCAGTGAGCATATATCAT +
Preference number: 4 (lower is better)
Translates to: MVCRLYPRYSVF*ANIHLSVSIYH
Trigger: ATGATATATGCTCACTGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GCATTTCTGCTTCTTACATTTCTTATGGTCTGTAGGTaGTACCCTAGGTATTCTGTGTTCTTGGCTAATATA +
Preference number: 4 (lower is better)
Translates to: AFLLLTFLMVCR*YPRYSVFLANI
Trigger: TATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGACCATAAGAAATGTAAGAAGCAGAAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp GGCACAACTGTTGGTTATCATGAAGAAGAATTCGAATaGATCTATTCCTATCTTCTTGTACTAAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: GTTVGYHEEEFE*IYSYLLVLRST
Trigger: AGTTGACCTTAGTACAAGAAGATAGGAATAGATCAATTCGAATTCTTCTTCATGATAACCAACAGTTGTGCC
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
3UTR CAA 72 bp CTGCCTTCTAATTGGTATCCCCTTGATATCTGTTTGTaGTCTAATTGTTCTATCCAGAACTTCAATTACTAT +
Preference number: 4 (lower is better)
Translates to: LPSNWYPLDICL*SNCSIQNFNYY
Trigger: ATAGTAATTGAAGTTCTGGATAGAACAATTAGACAACAAACAGATATCAAGGGGATACCAATTAGAAGGCAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS-3UTR CAA 90 bp GTCTGTAGGTTGTACCCTAGGTATTCTGTGTTCTTGGCTAATATACACTTATCAAAAAGGAGAAACAGATaGGCTAGGATTCCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: VCRLYPRYSVFLANIHLSKRRNR*ARIPSP
Trigger: TGGACTTGGAATCCTAGCCAATCTGTTTCTCCTTTT...TGATAAGTGTATATTAGCCAAGAACACAGAATACCTAGGGTACAACCTACAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228574.2
CDS CCA 72 bp ATGGGGAAGAGTGAGCAGGATTTAGTGACCTTCATCTaGTGGGTTCCACTCACATTGGTAAAACCAGCAACA +
Preference number: 6 (lower is better)
Translates to: MGKSEQDLVTFI*WVPLTLVKPAT
Trigger: TGTTGCTGGTTTTACCAATGTGAGTGGAACCCACCAGATGAAGGTCACTAAATCCTGCTCACTCTTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164732.2
ENSMUST00000228574.2