Pregenerated sensors for VMN1R179 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046924Ensembl transcript IDs: ENSMUST00000049819.4, ENSMUST00000236851.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGTCCCTCCCTTTTAGTCCAGAGTGTCTCTCAACTCCAAGTCTCTaGTACCTTCTAGAGGGTCCAGCCACCTCCCATTCACTAAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: RSLPFSPECLSTPSL*YLLEGPATSHSLRL Trigger: CAACCTTAGTGAATGGGAGGTGGCTGGACCCTCTAGAAGGTACCAGAGACTTGGAGTTGAGAGACACTCTGGACTAAAAGGGAGGGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR GCA 90 bp | CCACGGGGGTCCTCGACTTCGGTCCATTGGTTGAATATAGTCATCTaGATGAGTCTCAGTCTGCTACTTTTTGAGCCTTTCAGAGGACAA | + |
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Preference number: 1 (lower is better) Translates to: PRGSSTSVHWLNIVI*MSLSLLLFEPFRGQ Trigger: TTGTCCTCTGAAAGGCTCAAAAAGTAGCAGACTGAGACTCATGCAGATGACTATATTCAACCAATGGACCGAAGTCGAGGACCCCCGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR TCA 90 bp | TCAGGAGACGATGTCCAGTGTGGATCCTGGTATCCTCCCTGGTCCTaGGACATTCAAATTCTTAAGACTCCTGAGTATAAGTTGCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: SGDDVQCGSWYPPWS*DIQILKTPEYKLLL Trigger: CAAAAGCAACTTATACTCAGGAGTCTTAAGAATTTGAATGTCTCAGGACCAGGGAGGATACCAGGATCCACACTGGACATCGTCTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR GCA 90 bp | TATCATTCGCTTCAGTTGGTGACAAAGACCTCTGGTAATAGTGTTTaGACTGGAAGTTCCCGAGGGTACCCAGTCCATCATTTCATATGG | + |
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Preference number: 1 (lower is better) Translates to: YHSLQLVTKTSGNSV*TGSSRGYPVHHFIW Trigger: CCATATGAAATGATGGACTGGGTACCCTCGGGAACTTCCAGTGCAAACACTATTACCAGAGGTCTTTGTCACCAACTGAAGCGAATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CCA 90 bp | GTGACAACTTTGCCTCCATATGATACCTCTTGTCTCCTGTCTGATTaGCAGGTGTTTGTGATGATTGGAAAGACAATTTCACCAAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VTTLPPYDTSCLLSD*QVFVMIGKTISPRP Trigger: GGGCCTTGGTGAAATTGTCTTTCCAATCATCACAAACACCTGCCAATCAGACAGGAGACAAGAGGTATCATATGGAGGCAAAGTTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR TCA 90 bp | AGAGTGGTATTGCTGGGTCTTCAGGTAGATTTACTTCCAATGCTCTaGGTCATCTCCAGATTGATTTCTAGAGTGGTTGCACCAGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: RVVLLGLQVDLLPML*VISRLISRVVAPVC Trigger: GCAAACTGGTGCAACCACTCTAGAAATCAATCTGGAGATGACTCAGAGCATTGGAAGTAAATCTACCTGAAGACCCAGCAATACCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CCA 90 bp | CTCCCTCCTTCTGCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTaGGATGAAGCATCCTCATTTGTGATCTTCATCTTATTAAACATT | + |
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Preference number: 1 (lower is better) Translates to: LPPSASSDCFLLSPK*DEASSFVIFILLNI Trigger: AATGTTTAATAAGATGAAGATCACAAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGCAGAAGGAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CCA 90 bp | CTTCAACATTCTTACAACCCAGCAACTAAAGGTGTTGGAGGAAGATaGCTAACAGACAGGGAGAAGAAGGTCTGTTTAGAAGTAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LQHSYNPATKGVGGR*LTDREKKVCLEVVP Trigger: GGGAACTACTTCTAAACAGACCTTCTTCTCCCTGTCTGTTAGCCATCTTCCTCCAACACCTTTAGTTGCTGGGTTGTAAGAATGTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CCA 90 bp | AACGAGGAGAAGCAAGGCGAACTAATCCCAAAGCATCATCACTGTTaGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NEEKQGELIPKHHHC*VIVIMFAMSTHASA Trigger: AGCAGATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGCTTTGGGATTAGTTCGCCTTGCTTCTCCTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CCA 90 bp | GTTTGCACTGGAAGTTCCCGAGGGTACCCAGTCCATCATTTCATATaGAGGTTGGCATTGAGATTTTTATGTAGTCATATATGGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: VCTGSSRGYPVHHFI*RLALRFLCSHIWLF Trigger: AAAAAGCCATATATGACTACATAAAAATCTCAATGCCAACCTCCATATGAAATGATGGACTGGGTACCCTCGGGAACTTCCAGTGCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR GCA 90 bp | CATTACAGTGCATCAGATACCTTCTTCTTTCATCTATTTGTACCATaGCTCCATGTGTTACACATACAGACATATAGAGAAAATACTCAC | + |
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Preference number: 1 (lower is better) Translates to: HYSASDTFFFHLFVP*LHVLHIQTYRENTH Trigger: GTGAGTATTTTCTCTATATGTCTGTATGTGTAACACATGGAGGCATGGTACAAATAGATGAAAGAAGAAGGTATCTGATGCACTGTAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGTGCTCCCCACAACAGGCGTCCTCCTTCCCTGGGGCGACAAATCTCTCAGCACAAGTCAGATTTTaGGTTTCATCACACCAAATG | + |
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Preference number: 2 (lower is better) Translates to: RGCSPQQASSFPGATNLSAQVRF*VSSHQM Trigger: CATTTGGTGTGATGAAACTCAAAATCTGACTTGTGC...TGAGAGATTTGTCGCCCCAGGGAAGGAGGACGCCTGTTGTGGGGAGCACCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCATCAGTATCAGGTGCTGCTAGAGCCTCTCAGAGGACAGCCATGATAGACCACCAAGGCCCAGAGTaGAGACTTTACCAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SASVSGAARASQRTAMIDHQGPE*RLYQGL Trigger: AAGACCTTGGTAAAGTCTTCACTCTGGGCCTTGGTG...GTCTATCATGGCTGTCCTCTGAGAGGCTCTAGCAGCACCTGATACTGATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | GCACACCATAGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTaGAGATGGATCCCAAGTTGGGCAGGTCACTGTATCTCCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: AHHSFNNSVRPWSLA*RWIPSWAGHCISFP Trigger: AGGAAAGGAGATACAGTGACCTGCCCAACTTGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCTATGGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCCCCCATCACTCCACTTaGTGCCTTTTCTTTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: SKVNQCQSLISMNQQGDVPHHST*CLFFVL Trigger: CAGTACAAAGAAAAGGCATCAAGTGGAGTGATGGGG...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTGTATATGCCCAAGAGTaGTATTGCTGGGTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ASSDCFLLSPKWDEASSFVYAQE*YCWVFR Trigger: CCTGAAGACCCAGCAATACCACTCTTGGGCATATAC...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | AACATAGTGGAGCACATGCCCATGGGGCTTGGTGGAGCATCTTTAGGGTATATGAACTTTGCCTCCATATaGTACCTCTTGTCTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NIVEHMPMGLGGASLGYMNFASI*YLLSPV Trigger: GACAGGAGACAAGAGGTATCATATGGAGGCAAAGTT...CATATACCCTAAAGATGCTCCACCAAGCCCCATGGGCATGTGCTCCACTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCCAATCCCACCAGCAGTaGAGGAGTGTTTTATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKVNQCQSLISMNQQGDVQSHQQ*RSVLFL Trigger: GAGAAATAAAACACTCCTCCACTGCTGGTGGGATTG...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTCTCTTGTCTCCTGTCTaGTTGGCAGGTGTTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: NSLGSRLVETPGFSTRSPLLSPV*LAGVCD Trigger: ATCACAAACACCTGCCAATCAGACAGGAGACAAGAG...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTTGAGATGGATCCCATCACCCTTAAATACCTaGTCATGTTCCCCTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: HSFNNSVRPWSLALRWIPSPLNT*SCSPFP Trigger: GGGAAAAGGGGAACATGATCAGGTATTTAAGGGTGA...TGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTGCTCTGCTGCCTTTGTaGATTCTCTGGCAACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NSLGSRLVETPGFSTRSPALLPL*ILWQQN Trigger: GTTTTGTTGCCAGAGAATGCACAAAGGCAGCAGAGC...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGATTTTGATCTTAACCTCCCTGATTGATGTAAGGCAGAATCTTGGGGATATCTTGTGGCTCTGCTaGCTTTGTGCATTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGILILTSLIDVRQNLGDILWLC*LCAFSG Trigger: GCCAGAGAATGCACAAAGGCAGCAGAGCCACAAGAT...ATCCCCAAGATTCTGCCTTACATCAATCAGGGAGGTTAAGATCAAAATCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTGTTGTTTACAGCTTCTaGCTATCACAGACAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: ASSDCFLLSPKWDEASSFVVYSF*LSQTRL Trigger: CAGTCTTGTCTGTGATAGCCAGAAGCTGTAAACAAC...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | TGCAATCCCACCAGCAGTGGAGGAGTGTTTTATTTCTCTACATCCTaGCTATCATGTGCTGTCTCCTGGGATTTTGATCTTAACCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CNPTSSGGVFYFSTS*LSCAVSWDFDLNLP Trigger: AGGGAGGTTAAGATCAAAATCCCAGGAGACAGCACATGATAGCAAGGATGTAGAGAAATAAAACACTCCTCCACTGCTGGTGGGATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGATTTTGATCTTAACCTCCCTGATTGATGTAAGGCAGAATCTTGGGGATTACAGACAGCCACAGTaGCAACTTTGCCTCCATATG | + |
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Preference number: 2 (lower is better) Translates to: PGILILTSLIDVRQNLGDYRQPQ*QLCLHM Trigger: CATATGGAGGCAAAGTTGTCACTGTGGCTGTCTGTA...ATCCCCAAGATTCTGCCTTACATCAATCAGGGAGGTTAAGATCAAAATCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTCCTTTGTGCATTCTCTaGCAACAAAACAGGTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: ASSDCFLLSPKWDEASSFPLCIL*QQNRLD Trigger: ATCTAACCTGTTTTGTTGCCAGAGAATGCACAAAGG...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTCCAGAGAGTAGGAAGTaGTGTTTTTCAATGATCGAC | + |
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Preference number: 2 (lower is better) Translates to: NSLGSRLVETPGFSTRSPPESRK*CFSMID Trigger: GTCGATCATTGAAAAACATCACTTCCTACTCTCTGG...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTTGAGATGGATCCCATTACTTCCAATGCTCTaGGTCATCTCCAGATTGATT | + |
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Preference number: 2 (lower is better) Translates to: HSFNNSVRPWSLALRWIPLLPML*VISRLI Trigger: AATCAATCTGGAGATGACTCAGAGCATTGGAAGTAA...TGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAGTAGTTCCCTGTAGGCAATTGCAATCTTCATTGTCTACAGACCGATCCCTCTCCCAAGTGGGATaGAGCATCCTCATTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LEVVPCRQLQSSLSTDRSLSQVG*SILICD Trigger: ATCACAAATGAGGATGCTTCATCCCACTTGGGAGAG...GGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCATCAGTATCAGGTGCTGCTAGAGCCTCTCAGAGGACAGCCATGATAGACTTGGGGATTTTAATATaGATTTCTCTGATCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SASVSGAARASQRTAMIDLGILI*ISLITK Trigger: CTTGGTGATCAGAGAAATGCATATTAAAATCCCCAA...GTCTATCATGGCTGTCCTCTGAGAGGCTCTAGCAGCACCTGATACTGATGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCGGTGTTTGTGATGATTaGAAAGACAATTTCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SKVNQCQSLISMNQQGDVGVCDD*KDNFTK Trigger: CTTGGTGAAATTGTCTTTCCAATCATCACAAACACC...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTTGAGATGGATCCCATCTTTGTACTGGAGTTaGACTCTAGAAGATGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HSFNNSVRPWSLALRWIPSLYWS*TLEDGY Trigger: ATAGCCATCTTCTAGAGTCCAACTCCAGTACAAAGA...TGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | CAACGAGGAGAAGCAAGGCGAACTAATCCCAAAGCATCATCACTGTaGGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: QRGEARRTNPKASSL*GNSYNVCNVHSCIC Trigger: GCAGATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGCTTTGGGATTAGTTCGCCTTGCTTCTCCTCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | GACAGGGAGAAGAAGGTCTGTTTAGAAGTAGTTCCCTGTAGGCAATaGCAATCTTCATTGTCTACAGACCGATCCACTAGCAAAATACCA | + |
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Preference number: 2 (lower is better) Translates to: DREKKVCLEVVPCRQ*QSSLSTDRSTSKIP Trigger: TGGTATTTTGCTAGTGGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAAACAGACCTTCTTCTCCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCTTGGGATTCATCTGTTaGAAATTCTGTTTAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SKVNQCQSLISMNQQGDVLGFIC*KFCLVL Trigger: TAGGACTAAACAGAATTTGCAACAGATGAATCCCAA...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTATTTCTCTACATCCTTaGTATCATGTGCTGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NSLGSRLVETPGFSTRSPISLHP*YHVLSP Trigger: AGGAGACAGCACATGATAGCAAGGATGTAGAGAAAT...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCATCACTGTTGGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCCTTATCTTGTGGCTCTaGTGCCTTTGTGCATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ASSLLGNSYNVCNVHSCILILWL*CLCAFS Trigger: AGAGAATGCACAAAGGCAGCAGAGCCACAAGATAAG...GATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATTCTGCCTCCAGTGATTaGTTCCTTCTCTCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: NKYLNSDPQTYVTPITVHSASSD*FLLSPK Trigger: CTTGGGAGAGAGAAGGAAGCAATCACTGGAGGCAGA...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATCACCACGCCCGGCTATaGTTCAACATTCTTACAACC | + |
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Preference number: 2 (lower is better) Translates to: NKYLNSDPQTYVTPITVHHHARL*FNILTT Trigger: GGTTGTAAGAATGTTGAAGCATAGCCGGGCGTGGTG...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCATCACTGTTGGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCCTGATTGTCATCCTATaGAATCACCCTCCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASSLLGNSYNVCNVHSCILIVIL*NHPPSQ Trigger: CTGAGAAGGAGGGTGATTCCATAGGATGACAATCAG...GATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATGGTGTTGGAGGAAGATaGCTAACAGACAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: NKYLNSDPQTYVTPITVHGVGGR*LTDREK Trigger: CTTCTCCCTGTCTGTTAGCCATCTTCCTCCAACACC...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | GAACCATATTTTCTGTGTTCATTTTTCTGTTGTGGGACATCTGGGTaGTTTACAGCTTCTGGCTATCACAGACAAGACTGCTATGAACAT | + |
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Preference number: 2 (lower is better) Translates to: EPYFLCSFFCCGTSG*FTASGYHRQDCYEH Trigger: ATGTTCATAGCAGTCTTGTCTGTGATAGCCAGAAGCTGTAAACAACCCAGATGTCCCACAACAGAAAAATGAACACAGAAAATATGGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 90 bp | CAGTATATGATATCTTCACCAGTAAGTGTTTATCATTCGCTTCAGTaGGTGACAAAGACCTCTGGTAATAGTGTTTGCACTGGAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: QYMISSPVSVYHSLQ*VTKTSGNSVCTGSS Trigger: GGAACTTCCAGTGCAAACACTATTACCAGAGGTCTTTGTCACCAACTGAAGCGAATGATAAACACTTACTGGTGAAGATATCATATACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGTAGTTCCCTGTAGGCAATTGCAATCTTCATTGTCTACAGACCGATCCTCCTTCTCAGACATTTaGGATTCATCTGTTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LEVVPCRQLQSSLSTDRSSFSDI*DSSVAN Trigger: ATTTGCAACAGATGAATCCCAAATGTCTGAGAAGGA...GGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCATCACTGTTGGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCCCTCTGTTATATATATaGTGGAGCTGTGTAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASSLLGNSYNVCNVHSCIPLLYI*WSCVIS Trigger: GCTGATTACACAGCTCCAGCATATATATAACAGAGG...GATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCACAGTATATGATATCTTCACCAGTAAGTGTTTATCATTCGCTTCAGTTGTGTCTCCTGTCTGATTaGCAGGTGTTTGTGATGATT | + |
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Preference number: 2 (lower is better) Translates to: QPQYMISSPVSVYHSLQLCLLSD*QVFVMI Trigger: AATCATCACAAACACCTGCCAATCAGACAGGAGACA...CAACTGAAGCGAATGATAAACACTTACTGGTGAAGATATCATATACTGTGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCAGTCTTTTATCCACATTTCCCCTGCAGATCTACTTGACAGGAACAATTTTCATTTTTCTGTTGTaGGACATCTGGGTTGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SFSLLSTFPLQIYLTGTIFIFLL*DIWVVY Trigger: GTAAACAACCCAGATGTCCCACAACAGAAAAATGAA...AATTGTTCCTGTCAAGTAGATCTGCAGGGGAAATGTGGATAAAAGACTGAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CAA 90 bp | GTAACTCCCATTACAGTGCATCAGATACCTTCTTCTTTCATCTATTaGTACCATGCCTCCATGTGTTACACATACAGACATATAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VTPITVHQIPSSFIY*YHASMCYTYRHIEK Trigger: TTTCTCTATATGTCTGTATGTGTAACACATGGAGGCATGGTACAAATAGATGAAAGAAGAAGGTATCTGATGCACTGTAATGGGAGTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATTATCCTCCCTGGTCCTaGGACATTCAAATTCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: NKYLNSDPQTYVTPITVHYPPWS*DIQILK Trigger: CTTAAGAATTTGAATGTCTCAGGACCAGGGAGGATA...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCATCACTGTTGGGTAATAGTTATAATGTTTGCAATGTCCACTCATGCATCGTTTTCAGCAAAACATaGTCTCAAGTGTCTGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ASSLLGNSYNVCNVHSCIVFSKT*SQVSVF Trigger: AAACACAGACACTTGAGAGCATGTTTTGCTGAAAAC...GATGCATGAGTGGACATTGCAAACATTATAACTATTACCCAACAGTGATGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATTTTCTTTCAACCACTTaGTGGCTTACAACCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: NKYLNSDPQTYVTPITVHFLSTT*WLTTIC Trigger: ACAGATGGTTGTAAGCCATCAAGTGGTTGAAAGAAA...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGTGCTCCCCACAACAGGCGTCCTCCTTCCCTGGGGCGACAAATCTCTCACCTTGGAGCCTCGCTTaGAGATGGATCCCAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGCSPQQASSFPGATNLSPWSLA*RWIPSW Trigger: CCAACTTGGGATCCATCTCAAAGCGAGGCTCCAAGG...TGAGAGATTTGTCGCCCCAGGGAAGGAGGACGCCTGTTGTGGGGAGCACCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCGTGGCTCTGCTGCCTTaGTGCATTCTCTGGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SKVNQCQSLISMNQQGDVVALLP*CILWQQ Trigger: TTGTTGCCAGAGAATGCACAAAGGCAGCAGAGCCAC...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCATCAGTATCAGGTGCTGCTAGAGCCTCTCAGAGGACAGCCATGATAGACTGCCCAAGAGTGGTATaGCTGGGTCTTCAGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SASVSGAARASQRTAMIDCPRVV*LGLQVD Trigger: ATCTACCTGAAGACCCAGCAATACCACTCTTGGGCA...GTCTATCATGGCTGTCCTCTGAGAGGCTCTAGCAGCACCTGATACTGATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | CCTTTTAGTCCAGAGTGTCTCTCAACTCCAAGTCTCTaGTACCTTCTAGAGGGTCCAGCCACCTCCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PFSPECLSTPSL*YLLEGPATSHS Trigger: TGAATGGGAGGTGGCTGGACCCTCTAGAAGGTACCAGAGACTTGGAGTTGAGAGACACTCTGGACTAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | GCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTTaGGATGGATCCCAAGTTGGGCAGGTCACTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: ASIIVSGLGASL*DGSQVGQVTVS Trigger: AGATACAGTGACCTGCCCAACTTGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | GGGTTGTTTACAGCTTCTGGCTATCACAGACAAGACTaGTATGAACATAGTGGAGCACATGCCCATGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLFTASGYHRQD*YEHSGAHAHGA Trigger: AGCCCCATGGGCATGTGCTCCACTATGTTCATAGCAGTCTTGTCTGTGATAGCCAGAAGCTGTAAACAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | ATGTCCACTCATGCATCTGCTCCAGAAAAGCTCACATaGCCCTTAACCAGGCAGCTTTCCGAAAATCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MSTHASAPEKLT*PLTRQLSENRH Trigger: ATGGCGATTTTCGGAAAGCTGCCTGGTTAAGGGGCATGTGAGCTTTTCTGGAGCAGATGCATGAGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | CTTCAGTTGGTGACAAAGACCTCTGGTAATAGTGTTTaGACTGGAAGTTCCCGAGGGTACCCAGTCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQLVTKTSGNSV*TGSSRGYPVHH Trigger: ATGATGGACTGGGTACCCTCGGGAACTTCCAGTGCAAACACTATTACCAGAGGTCTTTGTCACCAACTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | AATAATAGTGTCAGGCCTTGGAGCCTCGCTTTGAGATaGATCCCAAGTTGGGCAGGTCACTGTATCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NNSVRPWSLALR*IPSWAGHCISF Trigger: AAAGGAGATACAGTGACCTGCCCAACTTGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTGGGTTGCTTGGGTTTTaGGAAGTTAGCTTCTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASSDCFLLSPKWDEASSFGLLGF*EVSFLS Trigger: ACTCAAGAAGCTAACTTCCAAAAACCCAAGCAACCC...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATAGTGGAGCACATGCCCATGGGGCTTGGTGGAGCATCTTTAGGGTATATGGTCCTTCTCAGACATTaGGGATTCATCTGTTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NIVEHMPMGLGGASLGYMVLLRH*GFICCK Trigger: TTTGCAACAGATGAATCCCAAATGTCTGAGAAGGAC...CATATACCCTAAAGATGCTCCACCAAGCCCCATGGGCATGTGCTCCACTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | GATGTCCAGTGTGGATCCTGGTATCCTCCCTGGTCCTaGGACATTCAAATTCTTAAGACTCCTGAGTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: DVQCGSWYPPWS*DIQILKTPEYK Trigger: CTTATACTCAGGAGTCTTAAGAATTTGAATGTCTCAGGACCAGGGAGGATACCAGGATCCACACTGGACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | CAGGAATTCTCTACTCTTCCCTCACCCTTAAATACCTaGTCATGTTCCCCTTTTCCCTTCCTCATCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QEFSTLPSPLNT*SCSPFPFLISL Trigger: AAGGGAGATGAGGAAGGGAAAAGGGGAACATGATCAGGTATTTAAGGGTGAGGGAAGAGTAGAGAATTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | AACCCCATCACTCCACTTGATGCCTTTTCTTTGTACTaGAGTTGGACTCTAGAAGATGGCTATCTGGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: NPITPLDAFSLY*SWTLEDGYLAI Trigger: GATAGCCAGATAGCCATCTTCTAGAGTCCAACTCCAGTACAAAGAAAAGGCATCAAGTGGAGTGATGGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | CAGCTCAGAACAAGTAGACCTCTGTTATATATATGCTaGAGCTGTGTAATCAGCCTCTGTGTGCTGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLRTSRPLLYIC*SCVISLCVLPE Trigger: TTCAGGCAGCACACAGAGGCTGATTACACAGCTCCAGCATATATATAACAGAGGTCTACTTGTTCTGAGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTTTTGGGATTCATCTGTaGCAAATTCTGTTTAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASSDCFLLSPKWDEASSFFGIHL*QILFSP Trigger: AGGACTAAACAGAATTTGCAACAGATGAATCCCAAA...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | CAAATCCAACCACAGGAGTCAATGACTTTAGTGCAATaGCTGGGTGTAAGTATCTGCATCAGTATCAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QIQPQESMTLVQ*LGVSICISIRC Trigger: GCACCTGATACTGATGCAGATACTTACACCCAGTCATTGCACTAAAGTCATTGACTCCTGTGGTTGGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | TCCTCGACTTCGGTCCATTGGTTGAATATAGTCATCTaGATGAGTCTCAGTCTGCTACTTTTTGAGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSTSVHWLNIVI*MSLSLLLFEPF Trigger: GAAAGGCTCAAAAAGTAGCAGACTGAGACTCATGCAGATGACTATATTCAACCAATGGACCGAAGTCGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | AATGAAGCTTCACTGGTTGGTATGAGTCCACCAAAGTaGCAAAAAGCAGCCAGAACATCACCAGAAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NEASLVGMSPPK*QKAARTSPEVL Trigger: AAGAACTTCTGGTGATGTTCTGGCTGCTTTTTGGCACTTTGGTGGACTCATACCAACCAGTGAAGCTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | ATCACTCCACTTGATGCCTTTTCTTTGTACTGGAGTTaGACTCTAGAAGATGGCTATCTGGCTATCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ITPLDAFSLYWS*TLEDGYLAIST Trigger: AGTGGAGATAGCCAGATAGCCATCTTCTAGAGTCCAACTCCAGTACAAAGAAAAGGCATCAAGTGGAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | TCTTACAACCCAGCAACTAAAGGTGTTGGAGGAAGATaGCTAACAGACAGGGAGAAGAAGGTCTGTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SYNPATKGVGGR*LTDREKKVCLE Trigger: TTCTAAACAGACCTTCTTCTCCCTGTCTGTTAGCCATCTTCCTCCAACACCTTTAGTTGCTGGGTTGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAAGTAGTTCCCTGTAGGCAATTGCAATCTTCATTGTCTACAGACCGATCCTCAGTCTGCTACTTTTaGAGCCTTTCAGAGGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEVVPCRQLQSSLSTDRSSVCYF*SLSEDN Trigger: GTTGTCCTCTGAAAGGCTCAAAAAGTAGCAGACTGA...GGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | TTGCTGGGTCTTCAGGTAGATTTACTTCCAATGCTCTaGGTCATCTCCAGATTGATTTCTAGAGTGGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLGLQVDLLPML*VISRLISRVVA Trigger: TGCAACCACTCTAGAAATCAATCTGGAGATGACTCAGAGCATTGGAAGTAAATCTACCTGAAGACCCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | CCAGCAGTGGAGGAGTGTTTTATTTCTCTACATCCTTaGTATCATGTGCTGTCTCCTGGGATTTTGATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PAVEECFISLHP*YHVLSPGILIL Trigger: TAAGATCAAAATCCCAGGAGACAGCACATGATAGCAAGGATGTAGAGAAATAAAACACTCCTCCACTGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | AATAGTTATAATGTTTGCAATGTCCACTCATGCATCTaGTCCAGAAAAGCTCACATGCCCCTTAACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSYNVCNVHSCI*SRKAHMPLNQA Trigger: TGCCTGGTTAAGGGGCATGTGAGCTTTTCTGGAGCAGATGCATGAGTGGACATTGCAAACATTATAACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | TTTATCAATGGAAGGGTAACAGGTCCTCCTAAGACATaGGAAAGTAATGGGACTTTCAAGACTCTGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FINGRVTGPPKT*ESNGTFKTLEA Trigger: AGCTTCCAGAGTCTTGAAAGTCCCATTACTTTCCCATGTCTTAGGAGGACCTGTTACCCTTCCATTGATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | TTGCCTCCATATGATACCTCTTGTCTCCTGTCTGATTaGCAGGTGTTTGTGATGATTGGAAAGACAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPPYDTSCLLSD*QVFVMIGKTIS Trigger: TGAAATTGTCTTTCCAATCATCACAAACACCTGCCAATCAGACAGGAGACAAGAGGTATCATATGGAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CCA 72 bp | GGAAGTTCCCGAGGGTACCCAGTCCATCATTTCATATaGAGGTTGGCATTGAGATTTTTATGTAGTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: GSSRGYPVHHFI*RLALRFLCSHI Trigger: TATATGACTACATAAAAATCTCAATGCCAACCTCCATATGAAATGATGGACTGGGTACCCTCGGGAACTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCAGTCTTTTATCCACATTTCCCCTGCAGATCTACTTGACAGGAACAATTCTTGATGCCTTTTCTTaGTACTGGAGTTGGACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFSLLSTFPLQIYLTGTILDAFS*YWSWTL Trigger: TAGAGTCCAACTCCAGTACAAAGAAAAGGCATCAAG...AATTGTTCCTGTCAAGTAGATCTGCAGGGGAAATGTGGATAAAAGACTGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | TTTGATGTAATGAGCACTGCTCCAGAGAGTAGGAAGTaGTGTTTTTCAATGATCGACTCTCACTTACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FDVMSTAPESRK*CFSMIDSHLLC Trigger: ACACAGTAAGTGAGAGTCGATCATTGAAAAACATCACTTCCTACTCTCTGGAGCAGTGCTCATTACATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACCACAGTATATGATATCTTCACCAGTAAGTGTTTATCATTCGCTTCAGTTGGTGTTCATTTTTCTGTaGTGGGACATCTGGGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QPQYMISSPVSVYHSLQLVFIFL*WDIWVV Trigger: AACAACCCAGATGTCCCACAACAGAAAAATGAACAC...CAACTGAAGCGAATGATAAACACTTACTGGTGAAGATATCATATACTGTGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATACTTCGGTCCATTGGTaGAATATAGTCATCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: NKYLNSDPQTYVTPITVHTSVHW*NIVICM Trigger: CATGCAGATGACTATATTCAACCAATGGACCGAAGT...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR GCA 72 bp | GCATCAGATACCTTCTTCTTTCATCTATTTGTACCATaGCTCCATGTGTTACACATACAGACATATAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASDTFFFHLFVP*LHVLHIQTYRE Trigger: TTCTCTATATGTCTGTATGTGTAACACATGGAGGCATGGTACAAATAGATGAAAGAAGAAGGTATCTGATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | TTGTCTACAGACCGATCCACTAGCAAAATACCAAGTTaGATCACTAATAACAGCTCAATCCAAAAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSTDRSTSKIPS*ITNNSSIQKKQ Trigger: TTGTTTCTTTTGGATTGAGCTGTTATTAGTGATTCAACTTGGTATTTTGCTAGTGGATCGGTCTGTAGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR TCA 72 bp | GGTACCCAGTCCATCATTTCATATGGAGGTTGGCATTaGGATTTTTATGTAGTCATATATGGCTTTTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GTQSIISYGGWH*DFYVVIYGFLD Trigger: ATCTAAAAAGCCATATATGACTACATAAAAATCTCAATGCCAACCTCCATATGAAATGATGGACTGGGTACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGTGCTCCCCACAACAGGCGTCCTCCTTCCCTGGGGCGACAAATCTCTCATCTGTAACAAGGGCTTaGATGATGATGCAAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGCSPQQASSFPGATNLSSVTRA*MMMQVK Trigger: TTTTACTTGCATCATCATTCAAGCCCTTGTTACAGA...TGAGAGATTTGTCGCCCCAGGGAAGGAGGACGCCTGTTGTGGGGAGCACCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATCAGTATCAGGTGCTGCTAGAGCCTCTCAGAGGACAGCCATGATAGACCAGGATAGTACTGGTTaGTCTAGTCTCAGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASVSGAARASQRTAMIDQDSTG*SSLSLA Trigger: GGCCAAGCTGAGACTAGAGCAACCAGTACTATCCTG...GTCTATCATGGCTGTCCTCTGAGAGGCTCTAGCAGCACCTGATACTGATGCAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTGCTCCCCACAACAGGCGTCCTCCTTCCCTGGGGCGACAAATCTCTCAAGTTGGAGGATTTCTTaGAGCAAAAGTCATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: RGCSPQQASSFPGATNLSSWRIS*SKSHHI Trigger: AATGTGATGACTTTTGCTCCAAGAAATCCTCCAACT...TGAGAGATTTGTCGCCCCAGGGAAGGAGGACGCCTGTTGTGGGGAGCACCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| 3UTR CAA 72 bp | AGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTaGAGATGGATCCCAAGTTGGGCAGGTCACTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SFNNSVRPWSLA*RWIPSWAGHCI Trigger: GATACAGTGACCTGCCCAACTTGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR GCA 90 bp | AACATAGTGGAGCACATGCCCATGGGGCTTGGTGGAGCATCTTTAGGGTATATGTGGAACACAAGTTTGTaGTTCTTGCCACTAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIVEHMPMGLGGASLGYMWNTSL*FLPLGE Trigger: TTCGCCTAGTGGCAAGAAGCACAAACTTGTGTTCCA...CATATACCCTAAAGATGCTCCACCAAGCCCCATGGGCATGTGCTCCACTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCAGTATCAGGTGCTGCTAGAGCCTCTCAGAGGACAGCCATGATAGACCAAACAGAAAGACATTaGCCACAGTTCCAACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASVSGAARASQRTAMIDQTERH*PQFQHQ Trigger: TTGGTGTTGGAACTGTGGCCAATGTCTTTCTGTTTG...GTCTATCATGGCTGTCCTCTGAGAGGCTCTAGCAGCACCTGATACTGATGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR TCA 90 bp | CATAGCTTCAATAATAGTGTCAGGCCTTGGAGCCTCGCTTTGAGATGGATCCCATGCCTCACAAATGCATaGGAATCTGTAACAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSFNNSVRPWSLALRWIPCLTNA*ESVTRA Trigger: AGCCCTTGTTACAGATTCTCATGCATTTGTGAGGCA...TGGGATCCATCTCAAAGCGAGGCTCCAAGGCCTGACACTATTATTGAAGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTGTAACAAGAATACCTTaGCAAACTTGGGACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDCFLLSPKWDEASSFVTRIP*QTWDTC Trigger: GCAAGTGTCCCAAGTTTGGCAAGGTATTCTTGTTAC...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTGAGCTACTTCCTCAGTaGTTTTCAGCGACTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASSDCFLLSPKWDEASSFELLPQ*FSATYQ Trigger: TTGATAAGTCGCTGAAAACCACTGAGGAAGTAGCTC...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCCCAATGCCTCACAAATaGATGAGAATCTGTAACAAG | + |
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Preference number: 4 (lower is better) Translates to: SKVNQCQSLISMNQQGDVPMPHK*MRICNK Trigger: CTTGTTACAGATTCTCATGCATTTGTGAGGCATTGG...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR TCA 90 bp | GCCTCCAGTGATTGCTTCCTTCTCTCTCCCAAGTGGGATGAAGCATCCTCATTTTCCTCAAGAAGAAAATaGCTCTACTGTATCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: ASSDCFLLSPKWDEASSFSSRRK*LYCIQK Trigger: CTTTTGGATACAGTAGAGTCATTTTCTTCTTGAGGA...AAATGAGGATGCTTCATCCCACTTGGGAGAGAGAAGGAAGCAATCACTGGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | CTACATCCTTGCTATCATGTGCTGTCTCCTGGGATTTaGATCTTAACCTCCCTGATTGATGTAAGGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LHPCYHVLSPGI*ILTSLIDVRQN Trigger: ATTCTGCCTTACATCAATCAGGGAGGTTAAGATCAAAATCCCAGGAGACAGCACATGATAGCAAGGATGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | TTTCTGTGTTCATTTTTCTGTTGTGGGACATCTGGGTaGTTTACAGCTTCTGGCTATCACAGACAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: FLCSFFCCGTSG*FTASGYHRQDC Trigger: GCAGTCTTGTCTGTGATAGCCAGAAGCTGTAAACAACCCAGATGTCCCACAACAGAAAAATGAACACAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | AAGAAGGTCTGTTTAGAAGTAGTTCCCTGTAGGCAATaGCAATCTTCATTGTCTACAGACCGATCCACTAGC | + |
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Preference number: 4 (lower is better) Translates to: KKVCLEVVPCRQ*QSSLSTDRSTS Trigger: GCTAGTGGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAAACAGACCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | TCCCGAGGGTACCCAGTCCATCATTTCATATGGAGGTaGGCATTGAGATTTTTATGTAGTCATATATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SRGYPVHHFIWR*ALRFLCSHIWL Trigger: AAGCCATATATGACTACATAAAAATCTCAATGCCAACCTCCATATGAAATGATGGACTGGGTACCCTCGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | TTAGAAGTAGTTCCCTGTAGGCAATTGCAATCTTCATaGTCTACAGACCGATCCACTAGCAAAATACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LEVVPCRQLQSS*STDRSTSKIPS Trigger: ACTTGGTATTTTGCTAGTGGATCGGTCTGTAGACAATGAAGATTGCAATTGCCTACAGGGAACTACTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR TCA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATCAAAGCAAGAAGATCTaGAGAGCTACTTCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NKYLNSDPQTYVTPITVHQSKKI*RATSSV Trigger: CACTGAGGAAGTAGCTCTTCAGATCTTCTTGCTTTG...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | ATATCTTCACCAGTAAGTGTTTATCATTCGCTTCAGTaGGTGACAAAGACCTCTGGTAATAGTGTTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: ISSPVSVYHSLQ*VTKTSGNSVCT Trigger: AGTGCAAACACTATTACCAGAGGTCTTTGTCACCAACTGAAGCGAATGATAAACACTTACTGGTGAAGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | GGGTACCCAGTCCATCATTTCATATGGAGGTTGGCATaGAGATTTTTATGTAGTCATATATGGCTTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: GYPVHHFIWRLA*RFLCSHIWLFR Trigger: TCTAAAAAGCCATATATGACTACATAAAAATCTCAATGCCAACCTCCATATGAAATGATGGACTGGGTACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| 3UTR CAA 72 bp | ATTACAGTGCATCAGATACCTTCTTCTTTCATCTATTaGTACCATGCCTCCATGTGTTACACATACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: ITVHQIPSSFIY*YHASMCYTYRH Trigger: ATGTCTGTATGTGTAACACATGGAGGCATGGTACAAATAGATGAAAGAAGAAGGTATCTGATGCACTGTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGTGCTCCCCACAACAGGCGTCCTCCTTCCCTGGGGCGACAAATCTCTCACAGTTGGAGGATTTCTaGGAGCAAAAGTCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: RGCSPQQASSFPGATNLSQLEDF*EQKSSH Trigger: ATGTGATGACTTTTGCTCCAAGAAATCCTCCAACTG...TGAGAGATTTGTCGCCCCAGGGAAGGAGGACGCCTGTTGTGGGGAGCACCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGGTGAATCAATGTCAGAGCCTCATCAGCATGAACCAGCAAGGAGACGTCGTGAAGCAGAACAACTaGCTTCTACAGTCAGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: SKVNQCQSLISMNQQGDVVKQNN*LLQSVL Trigger: TAACACTGACTGTAGAAGCAAGTTGTTCTGCTTCAC...GACGTCTCCTTGCTGGTTCATGCTGATGAGGCTCTGACATTGATTCACCTTGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS TCA 90 bp | ACATTGGCCACAGTTCCAACACCAAACTGGCAAAGCAAGAAGATCTaGAGAGCTACTTCCTCAGTGGTTTTCAGCGACTTATCAAGCGTA | + |
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Preference number: 5 (lower is better) Translates to: TLATVPTPNWQSKKI*RATSSVVFSDLSSV Trigger: TACGCTTGATAAGTCGCTGAAAACCACTGAGGAAGTAGCTCTTCAGATCTTCTTGCTTTGCCAGTTTGGTGTTGGAACTGTGGCCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTCTACAGTCAGTGTTATaGTCTGCTATCTGTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: NSLGSRLVETPGFSTRSPLQSVL*SAICGP Trigger: TGGTCCACAGATAGCAGACAATAACACTGACTGTAG...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS GCA 90 bp | ATAAAAGCTAACAAATGTGACCACCAGCATCAGGATAGTACTGGTTaGTCTAGTCTCAGCTTGGCCTCTGTAGTGTCGATTGGTAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: IKANKCDHQHQDSTG*SSLSLASVVSIGSK Trigger: TTTACTACCAATCGACACTACAGAGGCCAAGCTGAGACTAGAGCAACCAGTACTATCCTGATGCTGGTGGTCACATTTGTTAGCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCAGTCTTTTATCCACATTTCCCCTGCAGATCTACTTGACAGGAACAATTAAGAGAATCAAGATATaGGCCACAGCCATGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SFSLLSTFPLQIYLTGTIKRIKI*ATAMWL Trigger: AAGCCACATGGCTGTGGCCAATATCTTGATTCTCTT...AATTGTTCCTGTCAAGTAGATCTGCAGGGGAAATGTGGATAAAAGACTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | AATTCCCTGGGCTCCAGGTTAGTTGAGACTCCTGGTTTTTCTACAAGATCACCTGCAAAAGTCATCACATaGGTTGGAAATATAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: NSLGSRLVETPGFSTRSPAKVIT*VGNIVM Trigger: CATCACTATATTTCCAACCAATGTGATGACTTTTGC...AGGTGATCTTGTAGAAAAACCAGGAGTCTCAACTAACCTGGAGCCCAGGGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS CCA 90 bp | AACCAGTCAAGACTGGATAGAAATTATGGACAAACAGAAAGACATTaGCCACAGTTCCAACACCAAACTGGCAAAGCAAGAAGATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: NQSRLDRNYGQTERH*PQFQHQTGKARRSE Trigger: TTCAGATCTTCTTGCTTTGCCAGTTTGGTGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTATCCAGTCTTGACTGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CCA 90 bp | GAGGTCAGTTGGAGGATTTCTTGGAGCAAAAGTCATCACATTGGTTaGAAATATAGTGATGAAGAGAATCAAGATATTGGCCACAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: EVSWRISWSKSHHIG*KYSDEENQDIGHSH Trigger: ATGGCTGTGGCCAATATCTTGATTCTCTTCATCACTATATTTCCAACCAATGTGATGACTTTTGCTCCAAGAAATCCTCCAACTGACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS-3UTR CAA 90 bp | AACAAGTACCTAAATAGTGATCCACAAACATATGTAACTCCCATTACAGTGCATATCTGTAACAAGGGCTaGAATGATGATGCAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: NKYLNSDPQTYVTPITVHICNKG*NDDASK Trigger: TTTACTTGCATCATCATTCAAGCCCTTGTTACAGAT...ATGCACTGTAATGGGAGTTACATATGTTTGTGGATCACTATTTAGGTACTTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236851.2 |
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| CDS GCA 72 bp | AACAAATGTGACCACCAGCATCAGGATAGTACTGGTTaGTCTAGTCTCAGCTTGGCCTCTGTAGTGTCGATT | + |
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Preference number: 6 (lower is better) Translates to: NKCDHQHQDSTG*SSLSLASVVSI Trigger: AATCGACACTACAGAGGCCAAGCTGAGACTAGAGCAACCAGTACTATCCTGATGCTGGTGGTCACATTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CAA 90 bp | TGTGACCACCAGCATCAGGATAGTACTGGTTGCTCTAGTCTCAGCTaGGCCTCTGTAGTGTCGATTGGTAGTAAAGATATGCTGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: CDHQHQDSTGCSSLS*ASVVSIGSKDMLHF Trigger: AAAATGCAGCATATCTTTACTACCAATCGACACTACAGAGGCCAAGCTGAGACTAGAGCAACCAGTACTATCCTGATGCTGGTGGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS TCA 72 bp | ACAGTTCCAACACCAAACTGGCAAAGCAAGAAGATCTaGAGAGCTACTTCCTCAGTGGTTTTCAGCGACTTA | + |
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Preference number: 6 (lower is better) Translates to: TVPTPNWQSKKI*RATSSVVFSDL Trigger: TAAGTCGCTGAAAACCACTGAGGAAGTAGCTCTTCAGATCTTCTTGCTTTGCCAGTTTGGTGTTGGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS GCA 72 bp | GCCTGTGACCAAAGCTTCACTCCAATGCCTCACAAATaGATGAGAATCTGTAACAAGGGCTTGAATGATGAT | + |
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Preference number: 6 (lower is better) Translates to: ACDQSFTPMPHK*MRICNKGLNDD Trigger: ATCATCATTCAAGCCCTTGTTACAGATTCTCATGCATTTGTGAGGCATTGGAGTGAAGCTTTGGTCACAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CAA 90 bp | GTCATCACATTGGTTGGAAATATAGTGATGAAGAGAATCAAGATATaGGCCACAGCCATGTGGCTTAAAATCACCTGTCTGGGACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VITLVGNIVMKRIKI*ATAMWLKITCLGLC Trigger: ACAGAGTCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATATCTTGATTCTCTTCATCACTATATTTCCAACCAATGTGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS TCA 72 bp | TGTCGATTGGTAGTAAAGATATGCTGCATTTTATGGTaGTGTCTATGGAGGAGAAGTACCATGGAGACACTG | + |
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Preference number: 6 (lower is better) Translates to: CRLVVKICCILW*CLWRRSTMETL Trigger: CAGTGTCTCCATGGTACTTCTCCTCCATAGACATCACCATAAAATGCAGCATATCTTTACTACCAATCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS GCA 72 bp | GACACTGAAGAACCAACAACTGTAACAAGAATACCTTaGCAAACTTGGGACACTTGCTCTGAGTATGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: DTEEPTTVTRIP*QTWDTCSEYEF Trigger: AAACTCATACTCAGAGCAAGTGTCCCAAGTTTGGCAAGGTATTCTTGTTACAGTTGTTGGTTCTTCAGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS GCA 72 bp | GCAGAACAACTTGCTTCTACAGTCAGTGTTATTGTCTaGTATCTGTGGACCAGTGACCTTAATTGGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: AEQLASTVSVIV*YLWTSDLNWNV Trigger: TACATTCCAATTAAGGTCACTGGTCCACAGATAGCAGACAATAACACTGACTGTAGAAGCAAGTTGTTCTGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS GCA 72 bp | ACTGTAACAAGAATACCTTGCCAAACTTGGGACACTTaGTCTGAGTATGAGTTTACCTCTATTAACAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TVTRIPCQTWDT*SEYEFTSINRN Trigger: GTTCCTGTTAATAGAGGTAAACTCATACTCAGAGCAAGTGTCCCAAGTTTGGCAAGGTATTCTTGTTACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CCA 72 bp | GAACCAACAACTGTAACAAGAATACCTTGCCAAACTTaGGACACTTGCTCTGAGTATGAGTTTACCTCTATT | + |
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Preference number: 6 (lower is better) Translates to: EPTTVTRIPCQT*DTCSEYEFTSI Trigger: AATAGAGGTAAACTCATACTCAGAGCAAGTGTCCCAAGTTTGGCAAGGTATTCTTGTTACAGTTGTTGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CCA 72 bp | CTTGCTTCTACAGTCAGTGTTATTGTCTGCTATCTGTaGACCAGTGACCTTAATTGGAATGTAGATGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LASTVSVIVCYL*TSDLNWNVDVV Trigger: AACAACATCTACATTCCAATTAAGGTCACTGGTCCACAGATAGCAGACAATAACACTGACTGTAGAAGCAAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CAA 72 bp | TTGGTTGGAAATATAGTGATGAAGAGAATCAAGATATaGGCCACAGCCATGTGGCTTAAAATCACCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVGNIVMKRIKI*ATAMWLKITCL Trigger: CAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATATCTTGATTCTCTTCATCACTATATTTCCAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CAA 72 bp | ATGACTCTACTGTATCCAAAAGTGAAGCAGAACAACTaGCTTCTACAGTCAGTGTTATTGTCTGCTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: MTLLYPKVKQNN*LLQSVLLSAIC Trigger: ACAGATAGCAGACAATAACACTGACTGTAGAAGCAAGTTGTTCTGCTTCACTTTTGGATACAGTAGAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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| CDS CAA 72 bp | TCAGTTGGAGGATTTCTTGGAGCAAAAGTCATCACATaGGTTGGAAATATAGTGATGAAGAGAATCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SVGGFLGAKVIT*VGNIVMKRIKI Trigger: TATCTTGATTCTCTTCATCACTATATTTCCAACCAATGTGATGACTTTTGCTCCAAGAAATCCTCCAACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049819.4 ENSMUST00000236851.2 |
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