Pregenerated sensors for VMN1R177 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057513

Ensembl transcript IDs: ENSMUST00000073967.4

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTGGACACAGCCATGTTAGTACAAATCACTTCTTTGGGTCTCAGCTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGACAAACAGAAGA	+
Preference number: 5 (lower is better) Translates to: LDTAMLVQITSLGLS*HPVKSGEKLWTNRR Trigger: TCTTCTGTTTGTCCATAATTTCTCTCCACTTTTGACTGGATGTCAGCTGAGACCCAAAGAAGTGATTTGTACTAACATGGCTGTGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073967.4
CDS TCA 72 bp	GCCATGTTAGTACAAATCACTTCTTTGGGTCTCAGCTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGACA	+
Preference number: 6 (lower is better) Translates to: AMLVQITSLGLS*HPVKSGEKLWT Trigger: TGTCCATAATTTCTCTCCACTTTTGACTGGATGTCAGCTGAGACCCAAAGAAGTGATTTGTACTAACATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073967.4
CDS CAA 90 bp	GTTTGTGCTTCTTGCTACCATGTATACAAAGTACTCAAGTTTACATaGAAGGTCATTCAGTGGATTCCTTTGAGCAACAAACACATTGTT	+
Preference number: 6 (lower is better) Translates to: VCASCYHVYKVLKFT*KVIQWIPLSNKHIV Trigger: AACAATGTGTTTGTTGCTCAAAGGAATCCACTGAATGACCTTCAATGTAAACTTGAGTACTTTGTATACATGGTAGCAAGAAGCACAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073967.4
CDS CAA 72 bp	TCTTGCTACCATGTATACAAAGTACTCAAGTTTACATaGAAGGTCATTCAGTGGATTCCTTTGAGCAACAAA	+
Preference number: 6 (lower is better) Translates to: SCYHVYKVLKFT*KVIQWIPLSNK Trigger: TTTGTTGCTCAAAGGAATCCACTGAATGACCTTCAATGTAAACTTGAGTACTTTGTATACATGGTAGCAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073967.4
CDS CCA 72 bp	TACAAAGTACTCAAGTTTACATTGAAGGTCATTCAGTaGATTCCTTTGAGCAACAAACACATTGTTTCGAAA	+
Preference number: 6 (lower is better) Translates to: YKVLKFTLKVIQ*IPLSNKHIVSK Trigger: TTTCGAAACAATGTGTTTGTTGCTCAAAGGAATCCACTGAATGACCTTCAATGTAAACTTGAGTACTTTGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073967.4

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