Pregenerated sensors for VMN1R176 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096859Ensembl transcript IDs: ENSMUST00000171073.2, ENSMUST00000226319.2, ENSMUST00000226767.2, ENSMUST00000227129.2, ENSMUST00000227661.2, ENSMUST00000228280.2, ENSMUST00000228793.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTaGACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLLLSPNIQLHISFP*TPLAQAFILPIKIG Trigger: TCCTATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCCATATTTCCTTCCCCTaGACACCACTAGCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SPFETPYNLWFLKALCFCHISFP*TPLAQA Trigger: GGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATG...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR CAA 90 bp | TCTACCACTACAGTACCATCCTCTCCATTTGAGACCCCTTATAATTaGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTTTCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: STTTVPSSPFETPYN*WFLKALCFCSAFHP Trigger: TGGATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTACATATTTCCTTCCCCTaGACACCACTAGCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKLVCSYSMSSNILHDTLHISFP*TPLAQA Trigger: GGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATG...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCATATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATAGGACTGTaGTTTACAGGAAATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: QLHISFPCTPLAQAFILPIKIGL*FTGNHL Trigger: CAGGTGATTTCCTGTAAACCACAGTCCTATCTTGAT...TGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCATTACAGGAAATCACCTaGGTTCTGACTCATTATTTG | + |
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Preference number: 2 (lower is better) Translates to: QLHISFPCTPLAQAFILPLQEIT*VLTHYL Trigger: CAAATAATGAGTCAGAACTCAGGTGATTTCCTGTAA...TGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATGGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCCATATTTCCTTCCCCTaGACACCACTAGCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ISYFLSQGAESCETVLCIHISFP*TPLAQA Trigger: GGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATG...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCATCAAGATAGGACTGTaGTTTACAGGAAATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: SPFETPYNLWFLKALCFCIKIGL*FTGNHL Trigger: CAGGTGATTTCCTGTAAACCACAGTCCTATCTTGAT...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTTACAGGAAATCACCTaGGTTCTGACTCATTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: SPFETPYNLWFLKALCFCLQEIT*VLTHYL Trigger: CAAATAATGAGTCAGAACTCAGGTGATTTCCTGTAA...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTATTTCTCAAGGCCTTGTaGTTCTGCTCTGCTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LKLVCSYSMSSNILHDTLFLKAL*FCSAFH Trigger: ATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAA...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR GCA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATTTTCTCAAGGCCTTGTaGTTCTGCTCTGCTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: HHILKLVCSYSMSSNILHFLKAL*FCSAFH Trigger: ATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAA...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACATCAAGATAGGACTGTaGTTTACAGGAAATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HILKLVCSYSMSSNILHDIKIGL*FTGNHL Trigger: CAGGTGATTTCCTGTAAACCACAGTCCTATCTTGAT...GTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCATCAAGATAGGACTGTaGTTTACAGGAAATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: ISYFLSQGAESCETVLCIIKIGL*FTGNHL Trigger: CAGGTGATTTCCTGTAAACCACAGTCCTATCTTGAT...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATACCCCTTATAATTTGTaGTTTCTCAAGGCCTTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HHILKLVCSYSMSSNILHTPYNL*FLKALC Trigger: GCACAAGGCCTTGAGAAACCACAAATTATAAGGGGT...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCTTACAGGAAATCACCTaGGTTCTGACTCATTATTTG | + |
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Preference number: 2 (lower is better) Translates to: ISYFLSQGAESCETVLCILQEIT*VLTHYL Trigger: CAAATAATGAGTCAGAACTCAGGTGATTTCCTGTAA...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CCA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATATCAAGATAGGACTGTaGTTTACAGGAAATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HHILKLVCSYSMSSNILHIKIGL*FTGNHL Trigger: CAGGTGATTTCCTGTAAACCACAGTCCTATCTTGAT...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR TCA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATTTACAGGAAATCACCTaGGTTCTGACTCATTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: HHILKLVCSYSMSSNILHLQEIT*VLTHYL Trigger: CAAATAATGAGTCAGAACTCAGGTGATTTCCTGTAA...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCTGGTTTCTCAAGGCCTaGTGCTTCTGCTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SAHVMLVGCFGNSPTQICWFLKA*CFCSAF Trigger: GAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCA...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTATGGTTTCTCAAGGCCTaGTGCTTCTGCTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: LKLVCSYSMSSNILHDTLWFLKA*CFCSAF Trigger: GAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCA...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCATATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCACAAGAAAACAGAATATaGTTGGCTGTTAGGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: QLHISFPCTPLAQAFILPQENRI*LAVRRV Trigger: AACTCTCCTAACAGCCAACAATATTCTGTTTTCTTG...TGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATGGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACTGGTTTCTCAAGGCCTaGTGCTTCTGCTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: HILKLVCSYSMSSNILHDWFLKA*CFCSAF Trigger: GAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCA...GTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCCAAGAAAACAGAATATaGTTGGCTGTTAGGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SPFETPYNLWFLKALCFCQENRI*LAVRRV Trigger: AACTCTCCTAACAGCCAACAATATTCTGTTTTCTTG...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTTTCCATCCACAAGAAAACAGAATATaGTTGGCTGTTAGGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: PYNLWFLKALCFCSAFHPQENRI*LAVRRV Trigger: AACTCTCCTAACAGCCAACAATATTCTGTTTTCTTG...TGGATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCTACCATCCTCTCCATTaGAGACCCCTTATAATTTGT | + |
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Preference number: 3 (lower is better) Translates to: SAHVMLVGCFGNSPTQICYHPLH*RPLIIC Trigger: ACAAATTATAAGGGGTCTCAAATGGAGAGGATGGTA...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTGAGTTCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCCAAGAAAACAGAATATaGTTGGCTGTTAGGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: HLSSDSLFVHSPSPICNIQENRI*LAVRRV Trigger: AACTCTCCTAACAGCCAACAATATTCTGTTTTCTTG...GATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGAACTCAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATACAAGAAAACAGAATATaGTTGGCTGTTAGGAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: ISFPCTPLAQAFILPIKIQENRI*LAVRRV Trigger: AACTCTCCTAACAGCCAACAATATTCTGTTTTCTTG...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR CCA 72 bp | GCTCAAGCCTTTATTTTACCAATCAAGATAGGACTGTaGTTTACAGGAAATCACCTGAGTTCTGACTCATTA | + |
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Preference number: 3 (lower is better) Translates to: AQAFILPIKIGL*FTGNHLSSDSL Trigger: TAATGAGTCAGAACTCAGGTGATTTCCTGTAAACCACAGTCCTATCTTGATTGGTAAAATAAAGGCTTGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR TCA 72 bp | CATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTaGAACAGTTCTTTGCATCACATACTCAAATTGGTA | + |
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Preference number: 3 (lower is better) Translates to: HFLFPFSRSREL*NSSLHHILKLV Trigger: TACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTTTCCATCCAAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PYNLWFLKALCFCSAFHPNRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...TGGATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTCAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: FETPYNLWFLKALCFCSAQSKRI*RVTSTV Trigger: CACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTG...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCCAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SPFETPYNLWFLKALCFCQSKRI*RVTSTV Trigger: CACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTG...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTTTCCATCCACAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: PYNLWFLKALCFCSAFHPQSKRI*RVTSTV Trigger: CACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTG...TGGATGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | GTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCTGTCAATAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VMLVGCFGNSPTQICPVNNRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...ATTGACAGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| 3UTR CAA 72 bp | ACAGTACCATCCTCTCCATTTGAGACCCCTTATAATTaGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TVPSSPFETPYN*WFLKALCFCSA Trigger: AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGAGGATGGTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | GTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCTGTCAATCAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: VMLVGCFGNSPTQICPVNQSKRI*RVTSTV Trigger: CACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTG...ATTGACAGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCCATATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCATCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: QLHISFPCTPLAQAFILPSQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...TGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAATATGGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATAAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTPLAQAFILPIKINRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATACAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTPLAQAFILPIKIQSKRI*RVTSTV Trigger: CACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTG...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTAAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLVCSYSMSSNILHDTLNRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTCAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FETPYNLWFLKALCFCSAQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCCAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPFETPYNLWFLKALCFCQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCTCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SAHVMLVGCFGNSPTQICSQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | GTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCTGTCAATTCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VMLVGCFGNSPTQICPVNSQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...ATTGACAGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HILKLVCSYSMSSNILHDNRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...GTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAHVMLVGCFGNSPTQICQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATATCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTPLAQAFILPIKISQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAAAACAGGTCACAAATGTaGCCACCAGCAACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SDSLFVHSPSPICNIKLQNRSQM*PPATGW Trigger: CCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTT...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTGAGTCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FETPYNLWFLKALCFCSAESLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGACTC...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCTGCTGCAGTCTTTGGTaGTGTCTGTTCAGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ISYFLSQGAESCETVLCICCSLW*CLFRRI Trigger: GATTCTCCTGAACAGACACCACCAAAGACTGCAGCA...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTATCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKLVCSYSMSSNILHDTLSQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTACAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLVCSYSMSSNILHDTLQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATAGAGTCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTPLAQAFILPIKIESLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGACTC...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCCAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISYFLSQGAESCETVLCIQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATTCTCAGCATGAACTCTaGGCTTCTGATTTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HHILKLVCSYSMSSNILHSQHEL*ASDLWI Trigger: AATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGA...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR TCA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAACAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDSLFVHSPSPICNIKLQQTEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTG...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CCA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACGAGTCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HILKLVCSYSMSSNILHDESLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGACTC...GTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCGAGTCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISYFLSQGAESCETVLCIESLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGACTC...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS TCA 90 bp | GAGAGCAGGTGGAGCACATGTTTGTACTTCGAGCCACCAGCCAAATaGAGTACCCAAGTTTACATTTTAGGTCAGTTGGGAACTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESRWSTCLYFEPPAK*STQVYILGQLGTPL Trigger: CAAGGGAGTTCCCAACTGACCTAAAATGTAAACTTGGGTACTTCATTTGGCTGGTGGCTCGAAGTACAAACATGTGCTCCACCTGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS GCA 90 bp | ATAACAGGTCACAAATGTGACCACCAGCAACAGGATGGTGTGGGATaGTCTAGTCTCAGCATGAACTCTGAGCTTCTGATTTGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ITGHKCDHQQQDGVG*SSLSMNSELLICGL Trigger: CAATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGACTAGAGCATCCCACACCATCCTGTTGCTGGTGGTCACATTTGTGACCTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FETPYNLWFLKALCFCSANMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGCATATT...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAHVMLVGCFGNSPTQICNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGCATATT...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | GTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCTGTCAATAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMLVGCFGNSPTQICPVNNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGCATATT...ATTGACAGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTCATGTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCAGGAGAATCAAGGTATaGCCCAAAGCTAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAHVMLVGCFGNSPTQICRRIKV*PKAKLA Trigger: AGCCAACTTAGCTTTGGGCAATACCTTGATTCTCCT...GCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAACATGAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SPFETPYNLWFLKALCFCLPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTTTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: FETPYNLWFLKALCFCSALPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCTCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FETPYNLWFLKALCFCSALLICG*NMLQSL Trigger: CAAAGACTGCAGCATATTCAATCCACAAATCAGAAG...AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TCTCCATTTGAGACCCCTTATAATTTGTGGTTTCTCAAGGCCTTGTGCTTCTGCCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPFETPYNLWFLKALCFCLLICG*NMLQSL Trigger: CAAAGACTGCAGCATATTCAATCCACAAATCAGAAG...GCAGAAGCACAAGGCCTTGAGAAACCACAAATTATAAGGGGTCTCAAATGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | GTTATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCTGTCAATACAAACAGAAAAATGTaGACTACAGTTCCAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VMLVGCFGNSPTQICPVNTNRKM*TTVPTP Trigger: TGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTGT...ATTGACAGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
||
| CDS-3UTR CAA 90 bp | CACCTGAGTTCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCTTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HLSSDSLFVHSPSPICNILPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...GATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGAACTCAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTAAGGAGAATCAAGGTATaGCCCAAAGCTAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKLVCSYSMSSNILHDTLRRIKV*PKAKLA Trigger: AGCCAACTTAGCTTTGGGCAATACCTTGATTCTCCT...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACACCACTAGCTCAAGCCTTTATTTTACCAATCAAGATATTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: ISFPCTPLAQAFILPIKILPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...TATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGGTGTGCAGGGGAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
||
| CDS-3UTR CAA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAAAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SDSLFVHSPSPICNIKLQNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGCATATT...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: HHILKLVCSYSMSSNILHNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGCATATT...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTAACAAACAGAAAAATGTaGACTACAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: LKLVCSYSMSSNILHDTLTNRKM*TTVPTP Trigger: TGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTGT...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACGCTATTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
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Preference number: 5 (lower is better) Translates to: LKLVCSYSMSSNILHDTLLPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...TAGCGTGTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAAAGGAGAATCAAGGTATaGCCCAAAGCTAAGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SDSLFVHSPSPICNIKLQRRIKV*PKAKLA Trigger: AGCCAACTTAGCTTTGGGCAATACCTTGATTCTCCT...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATAGGAGAATCAAGGTATaGCCCAAAGCTAAGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: HHILKLVCSYSMSSNILHRRIKV*PKAKLA Trigger: AGCCAACTTAGCTTTGGGCAATACCTTGATTCTCCT...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATGACACAAACAGAAAAATGTaGACTACAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: HILKLVCSYSMSSNILHDTNRKM*TTVPTP Trigger: TGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTGT...GTCATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCTTTTATGGGTCTCTGTaGAGATCCATTCAAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: ISYFLSQGAESCETVLCIFYGSL*RSIQEW Trigger: CCATTCTTGAATGGATCTCAACAGAGACCCATAAAA...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | ATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGTTGTGAAACAGTTCTTTGCATCCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ISYFLSQGAESCETVLCILLICG*NMLQSL Trigger: CAAAGACTGCAGCATATTCAATCCACAAATCAGAAG...GATGCAAAGAACTGTTTCACAACTCTCTGCTCCTTGAGAAAGGAAATAAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAATTTTATGGGTCTCTGTaGAGATCCATTCAAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: SDSLFVHSPSPICNIKLQFYGSL*RSIQEW Trigger: CCATTCTTGAATGGATCTCAACAGAGACCCATAAAA...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATTTGCCCAAAGCTAAGTaGGCTAGAATGACTTTTATG | + |
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Preference number: 5 (lower is better) Translates to: HHILKLVCSYSMSSNILHLPKAK*ARMTFM Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAA...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | CATCACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATTACATCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HHILKLVCSYSMSSNILHLLICG*NMLQSL Trigger: CAAAGACTGCAGCATATTCAATCCACAAATCAGAAG...ATGTAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTGATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS-3UTR CAA 90 bp | TCTGACTCATTATTTGTTCATAGCCCCTCCCCTATTTGTAACATCAAATTACAACTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SDSLFVHSPSPICNIKLQLLICG*NMLQSL Trigger: CAAAGACTGCAGCATATTCAATCCACAAATCAGAAG...TTGTAATTTGATGTTACAAATAGGGGAGGGGCTATGAACAAATAATGAGTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS TCA 72 bp | GGAGCATCACCCTACCCCAGGTACCAGGAGCAAGAGTaGCAAACTGATAAGTGCTCAGAGAGCAGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GASPYPRYQEQE*QTDKCSESRWS Trigger: GCTCCACCTGCTCTCTGAGCACTTATCAGTTTGTCACTCTTGCTCCTGGTACCTGGGGTAGGGTGATGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS CAA 90 bp | GGATGCTCTAGTCTCAGCATGAACTCTGAGCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTGGTGGTGTCTGTTCAGGAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GCSSLSMNSELLICG*NMLQSLVVSVQENH Trigger: GTGATTCTCCTGAACAGACACCACCAAAGACTGCAGCATATTCAATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGACTAGAGCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS TCA 72 bp | ACAGTTCCAACCCCAACCTGGCAAAGCAAGAGGATCTaGAGAGTCACTTCCACTGTGGTTTTCACAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: TVPTPTWQSKRI*RVTSTVVFTDL Trigger: TAAATCTGTGAAAACCACAGTGGAAGTGACTCTTCAGATCCTCTTGCTTTGCCAGGTTGGGGTTGGAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS CAA 72 bp | GAGCTTCTGATTTGTGGATTGAATATGCTGCAGTCTTaGGTGGTGTCTGTTCAGGAGAATCACCATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ELLICGLNMLQS*VVSVQENHHGD Trigger: GTCTCCATGGTGATTCTCCTGAACAGACACCACCAAAGACTGCAGCATATTCAATCCACAAATCAGAAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS CAA 72 bp | AGTCTCAGCATGAACTCTGAGCTTCTGATTTGTGGATaGAATATGCTGCAGTCTTTGGTGGTGTCTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLSMNSELLICG*NMLQSLVVSVQ Trigger: CTGAACAGACACCACCAAAGACTGCAGCATATTCAATCCACAAATCAGAAGCTCAGAGTTCATGCTGAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS CAA 72 bp | ATGCCTATACTGAAACCAGAGGTGGAGCAAACCCACTaGCTTTTAGAATTGCTATCATTATGTGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MPILKPEVEQTH*LLELLSLCVFW Trigger: CCAGAAAACACATAATGATAGCAATTCTAAAAGCAAGTGGGTTTGCTCCACCTCTGGTTTCAGTATAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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| CDS CAA 90 bp | AAAACTCTTATATTGTTTGGAAATGCAAAGAGGAGAATCAAGGTATaGCCCAAAGCTAAGTTGGCTAGAATGACTTTTATGGGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KTLILFGNAKRRIKV*PKAKLARMTFMGLC Trigger: ACAGAGACCCATAAAAGTCATTCTAGCCAACTTAGCTTTGGGCAATACCTTGATTCTCCTCTTTGCATTTCCAAACAATATAAGAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000171073.2 ENSMUST00000226319.2 ENSMUST00000226767.2 ENSMUST00000227129.2 ENSMUST00000227661.2 ENSMUST00000228280.2 ENSMUST00000228793.2 |
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