Pregenerated sensors for VMN1R174 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090411Ensembl transcript IDs: ENSMUST00000167551.2, ENSMUST00000228331.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTaGGGAGAGTACTCCCTGTGTGGGCAGGTGGAGGATGCCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: STLYRTTHRCLIWLR*GEYSLCGQVEDAKR Trigger: CCTCTTGGCATCCTCCACCTGCCCACACAGGGAGTACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CCA 90 bp | CATGTAGATGTCCAAGTGCAGTGCAGAGCTTGTCCTGCCCCTAACTaGCTGTGGTTCTCTAAACAATTGGACCCTCCTCTTAGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HVDVQVQCRACPAPN*LWFSKQLDPPLSLC Trigger: GCAGAGGCTAAGAGGAGGGTCCAATTGTTTAGAGAACCACAGCCAGTTAGGGGCAGGACAAGCTCTGCACTGCACTTGGACATCTACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CCA 90 bp | AGGTGGAGGATGCCAAGAGGTTCACCAGCCACCATGGAGAACTGTTaGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: RWRMPRGSPATMENC*ALETQVPSYQNRLG Trigger: TCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCAACAGTTCTCCATGGTGGCTGGTGAACCTCTTGGCATCCTCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR TCA 90 bp | GCTGTGGCAGTGCTGCAGAGCTCATTCTGCATGGGGAAGAGCTGTTaGGCTGACCAATGTATCTATAACCCAGGCACAGATTTAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: AVAVLQSSFCMGKSC*ADQCIYNPGTDLEH Trigger: GTGCTCTAAATCTGTGCCTGGGTTATAGATACATTGGTCAGCTCAACAGCTCTTCCCCATGCAGAATGAGCTCTGCAGCACTGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR TCA 90 bp | AGGGTTCTGTGTCAATATAGTGGCTCATGTTACCACATAAGACCTTaGAGTCATCCCTGGTCTGGGTTGCTTCTGGACCATGTAGATGTC | + |
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Preference number: 1 (lower is better) Translates to: RVLCQYSGSCYHIRP*SHPWSGLLLDHVDV Trigger: GACATCTACATGGTCCAGAAGCAACCCAGACCAGGGATGACTTCAAGGTCTTATGTGGTAACATGAGCCACTATATTGACACAGAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR TCA 90 bp | CATCTAGAGGTCTGCCTACCTTCACAATATGCAATCCAGGTGAGTTaGGGATGCTCAGAAGACTATGTGCCACATAGCCATTATGATGTG | + |
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Preference number: 1 (lower is better) Translates to: HLEVCLPSQYAIQVS*GCSEDYVPHSHYDV Trigger: CACATCATAATGGCTATGTGGCACATAGTCTTCTGAGCATCCTCAACTCACCTGGATTGCATATTGTGAAGGTAGGCAGACCTCTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CCA 90 bp | CTTCATCAAATCCCTTTCTTCAGGAGTTATAGAAGTCTTTTGGATTaGAGACCTAGGAAGTATAAGAGCGAAAGGGGAAGGAGGGCACAA | + |
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Preference number: 1 (lower is better) Translates to: LHQIPFFRSYRSLLD*RPRKYKSERGRRAQ Trigger: TTGTGCCCTCCTTCCCCTTTCGCTCTTATACTTCCTAGGTCTCCAATCCAAAAGACTTCTATAACTCCTGAAGAAAGGGATTTGATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR TCA 90 bp | GTCTTTCAGATCAAAAGCTGCAGGATTTCTACAACAAAGGATATCTaGGAGAAAACCCAGAAAGGATCCAATATTGATGGTGTGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VFQIKSCRISTTKDI*EKTQKGSNIDGVAE Trigger: TTCTGCCACACCATCAATATTGGATCCTTTCTGGGTTTTCTCTCAGATATCCTTTGTTGTAGAAATCCTGCAGCTTTTGATCTGAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCCCCCTGGTTGAGGGATaGAGTCACTCATCTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSPLVEG*SHSSPN Trigger: ATTTGGAGATGAGTGACTCCATCCCTCAACCAGGGG...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCAAGGAGTCATTCTTATaGGTAGGCCCCATGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSKESFL*VGPMQI Trigger: GATTTGCATGGGGCCTACCCATAAGAATGACTCCTT...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCTTCAGGGTCTCTGGATaGCAATCTGGCATAGATATA | + |
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Preference number: 2 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSFRVSG*QSGIDI Trigger: TATATCTATGCCAGATTGTCATCCAGAGACCCTGAA...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTTTGCCCCTTGCTCCATaGAAACTAGGCAAACACATG | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESLPLAP*KLGKHM Trigger: CATGTGTTTGCCTAGTTTCCATGGAGCAAGGGGCAA...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAAGAGCTCATTCTGCATaGGGAAGAGCTGTTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: WALETQVPSYQNRLGGHLRAHSA*GRAVEL Trigger: CAGCTCAACAGCTCTTCCCCATGCAGAATGAGCTCT...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTACCATGGAGAACTGTTaGGCTTTAGAAACCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESTMENC*ALETQV Trigger: CACCTGGGTTTCTAAAGCCCAACAGTTCTCCATGGT...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTAGACTGAGATACTTTTaGACACTCAGTCCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGRLRYF*TLSPGW Trigger: CCATCCAGGACTGAGTGTTCAAAAGTATCTCAGTCT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTCTTGCCCCAAGGCCATaGGAAGGTGAGAGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPLAPRP*EGESWP Trigger: GGGCCAGCTCTCACCTTCTCATGGCCTTGGGGCAAG...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTATATGAGGGTAGAACTTaGAGGAGAGGAGGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: WALETQVPSYQNRLGGHLYEGRT*RRGGKM Trigger: CATCTTCCCTCCTCTCCTCCAAGTTCTACCCTCATA...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCTATGAAAATGGGGAATaGGGTATGAGGGTAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSYENGE*GMRVEL Trigger: AAGTTCTACCCTCATACCCCATTCCCCATTTTCATA...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR GCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTTGGAAAGATCTCCCATaGTCATGGATTGGAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESWKDLP*SWIGRI Trigger: AATCCTTCCAATCCATGAGCATGGGAGATCTTTCCA...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTGACCATCCTCTGAAATaGAACACATTCCTGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESDHPLK*NTFLKL Trigger: CAGTTTCAGGAATGTGTTCCATTTCAGAGGATGGTC...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTAGCAAAACCAGGAGTTaGTTCTTTGGGGAAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESSKTRS*FFGEIN Trigger: GTTGATTTCCCCAAAGAACCAACTCCTGGTTTTGCT...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTACAACAAAGGATATCTaGGAGAAAACCCAGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESTTKDI*EKTQKG Trigger: TCCTTTCTGGGTTTTCTCTCAGATATCCTTTGTTGT...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGTTGAACACTCAGTCCTaGATGGGATGTCTTCATCAA | + |
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Preference number: 2 (lower is better) Translates to: YACPMRGLMCQSLTNTKVLNTQS*MGCLHQ Trigger: TTGATGAAGACATCCCATCCAGGACTGAGTGTTCAA...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTAACCATAATGGGTTATaGCTATTAGGGTTGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGNHNGL*LLGLCS Trigger: TGAGCACAACCCTAATAGCCATAACCCATTATGGTT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTTGTAGCCATGGGGGATaGGGAACTGGAGGTAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPCSHGG*GTGGSH Trigger: GTGGCTACCTCCAGTTCCCCATCCCCCATGGCTACA...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTATTGAAGATCTCAGATaGAAAGATCTCCCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: AHCIGQPTDVSFGSGGESIEDLR*KDLPCS Trigger: TGAGCATGGGAGATCTTTCCATCTGAGATCTTCAAT...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATGTTAAGCAAGGCCCCTaGTTGAGGGATGGAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYVKQGP*LRDGVT Trigger: AGTGACTCCATCCCTCAACCAGGGGCCTTGCTTAAC...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTATACAATAGTGAGTCATaGCCATCATACAGATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: WALETQVPSYQNRLGGHLYNSES*PSYRCS Trigger: AGAACATCTGTATGATGGCCATGACTCACTATTGTA...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAACAAAAGAATACACATaGTGTCCACTCACTGATAAG | + |
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Preference number: 2 (lower is better) Translates to: WALETQVPSYQNRLGGHLTKEYT*CPLTDK Trigger: CTTATCAGTGAGTGGACACCATGTGTATTCTTTTGT...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTACGGATACAGAAAATGTaGTATATTTACACAACGGAG | + |
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Preference number: 2 (lower is better) Translates to: WALETQVPSYQNRLGGHLRIQKM*YIYTTE Trigger: CTCCGTTGTGTAAATATACCACATTTTCTGTATCCG...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATCACAGATGTCTCATTTaGCTCAGGTGGGGAGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYHRCLI*LRWGEY Trigger: GTACTCTCCCCACCTGAGCCAAATGAGACATCTGTG...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGATGCAAATCAGTAGATaGCCAATACAAACTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: YACPMRGLMCQSLTNTKVMQISR*PIQTEL Trigger: AAGTTCAGTTTGTATTGGCCATCTACTGATTTGCAT...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTCCTATGGACTTAGCATaGGCTCCAAAATGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPPMDLA*APKCRG Trigger: ACCCCTGCATTTTGGAGCCCATGCTAAGTCCATAGG...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATTGTCCTGCCCCTAACTaGCTGTGGTTCTCTAAACAA | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYCPAPN*LWFSKQ Trigger: TTGTTTAGAGAACCACAGCCAGTTAGGGGCAGGACA...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATTGGGAATACTGTGTGTaGAAACGTGTGTGTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYWEYCV*KRVCLC Trigger: ACACAGACACACACGTTTTCACACACAGTATTCCCA...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATTTCCTTCAGGGTCTCTaGATGACAATCTGGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYFLQGL*MTIWHR Trigger: TCTATGCCAGATTGTCATCCAGAGACCCTGAAGGAA...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTCACTGTCTGATGCTCTaGAACAGCAAGAGTAACACA | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPHCLML*NSKSNT Trigger: TGTGTTACTCTTGCTGTTTCAGAGCATCAGACAGTG...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTACACTCAGTCCTGGATaGGATGTCTTCATCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPTLSPG*DVFIKS Trigger: GGATTTGATGAAGACATCCCATCCAGGACTGAGTGT...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTGCATACCCAAGCTTATaGGACACAGAGAAAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPAYPSL*DTEKAV Trigger: AACTGCTTTCTCTGTGTCCCATAAGCTTGGGTATGC...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTTATGAAGAGTGTTCTTaGTACTGTAGAGCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPYEECS*YCRALC Trigger: GCAGAGTGCTCTACAGTATCAAGAACACTCTTCATA...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATATATGTAGCATAAGCTaGCATTGTCTGGCATCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYICSIS*HCLASR Trigger: TCTTGATGCCAGACAATGCCAGCTTATGCTACATAT...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 90 bp | AATACTGTGTGTGAAAACGTGTGTGTCTGTGTCTATACATGTTTCTaGAGCTTTTTATTTACACTGTCTGATGCTCTGAAACAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NTVCENVCVCVYTCF*SFLFTLSDALKQQE Trigger: CTCTTGCTGTTTCAGAGCATCAGACAGTGTAAATAAAAAGCTCAAGAAACATGTATAGACACAGACACACACGTTTTCACACACAGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR TCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATAACAGTACATCTGAATaGTCTAGAACAAAAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYNSTSE*SRTKGS Trigger: GCTTCCTTTTGTTCTAGATCATTCAGATGTACTGTT...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATAGAAGTCTTTTGGATTaGAGACCTAGGAAGTATAAG | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYRSLLD*RPRKYK Trigger: CTTATACTTCCTAGGTCTCCAATCCAAAAGACTTCT...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATGATCTCCCATGCTCATaGATTGGAAGGATTAATATA | + |
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Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYDLPCS*IGRINI Trigger: TATATTAATCCTTCCAATCCATGAGCATGGGAGATC...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATCAGGAGTTGGTTCTTTaGGGAAATCAACAAATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYQELVL*GNQQID Trigger: ATCTATTTGTTGATTTCCCCAAAGAACCAACTCCTG...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTAAGGCAGACTTCAAGTaGAGTTCATTGATAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: HNELTYHRTVYTQKALYPKADFK*SSLITG Trigger: TCCTGTTATCAATGAACTCCACTTGAAGTCTGCCTT...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CAA 90 bp | GTTCTGAGAGGAAAATTCATAGCTCTGATTGCCTCCATAAAGAAATaGAAGAGAGCATATACTAGCAGCTTAACAGTACATCTGAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: VLRGKFIALIASIKK*KRAYTSSLTVHLND Trigger: ATCATTCAGATGTACTGTTAAGCTGCTAGTATATGCTCTCTTCAATTTCTTTATGGAGGCAATCAGAGCTATGAATTTTCCTCTCAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATCTCTGGATGACAATCTaGCATAGATATAACCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYLWMTI*HRYNLL Trigger: TAAAAGGTTATATCTATGCCAGATTGTCATCCAGAG...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATGCAAGTAAAGATGTATaGATAAAAGGGTATACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HIARIVPGTHPSQHTYKYASKDV*IKGYTV Trigger: CACAGTATACCCTTTTATCCATACATCTTTACTTGC...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | GCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATaGGGTAGATCCCATTCCACTTTACACCCCTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: APPFFFHEVVAA*GRSHSTLHPCS Trigger: GCTACAGGGGTGTAAAGTGGAATGGGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | GTCCTGCCCCTAACTGGCTGTGGTTCTCTAAACAATTaGACCCTCCTCTTAGCCTCTGCAGCACTAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLPLTGCGSLNN*TLLLASAALRG Trigger: TCCCCTTAGTGCTGCAGAGGCTAAGAGGAGGGTCCAATTGTTTAGAGAACCACAGCCAGTTAGGGGCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | TATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTaGGGAGAGTACTCCCTGTGTGGGCAGGTGGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: YRTTHRCLIWLR*GEYSLCGQVED Trigger: ATCCTCCACCTGCCCACACAGGGAGTACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | GTCCAAGTGCAGTGCAGAGCTTGTCCTGCCCCTAACTaGCTGTGGTTCTCTAAACAATTGGACCCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VQVQCRACPAPN*LWFSKQLDPPL Trigger: AAGAGGAGGGTCCAATTGTTTAGAGAACCACAGCCAGTTAGGGGCAGGACAAGCTCTGCACTGCACTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | AGCACATTGTATAGGACAACCCACAGATGTCTCATTTaGCTCAGGTGGGGAGAGTACTCCCTGTGTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: STLYRTTHRCLI*LRWGEYSLCGQ Trigger: CTGCCCACACAGGGAGTACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCGGGTTAGAGAAAGGATaGAAGGAGCCAAAGGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSGLEKG*KEPKGL Trigger: CAAACCCTTTGGCTCCTTCAATCCTTTCTCTAACCC...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | GAAGACGTACAGAATCAACTGACCTCAGCCCATGGTTaGTCACCAACACTGAACCACCAACCAACGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EDVQNQLTSAHG*SPTLNHQPTGM Trigger: CATGCCCGTTGGTTGGTGGTTCAGTGTTGGTGATCAACCATGGGCTGAGGTCAGTTGATTCTGTACGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | ACAAGAAGACGTACAGAATCAACTGACCTCAGCCCATaGTTGATCACCAACACTGAACCACCAACCAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: TRRRTESTDLSP*LITNTEPPTNG Trigger: CCCGTTGGTTGGTGGTTCAGTGTTGGTGATCAACCATGGGCTGAGGTCAGTTGATTCTGTACGTCTTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCAGAAAGGATCCAATATaGATGGTGTGGCAGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSRKDPI*MVWQKS Trigger: TGACTTCTGCCACACCATCAATATTGGATCCTTTCT...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTTCCTATCAGAATAGGTaGGGAGGACATCTAGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AHCIGQPTDVSFGSGGESSYQNR*GGHLEV Trigger: GACCTCTAGATGTCCTCCCAACCTATTCTGATAGGA...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR GCA 72 bp | GGATACCAAGAAGTGCTTGTTGACAGGAACCTGATATaGCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GYQEVLVDRNLI*LSYERSYVPEP Trigger: AGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATATCAGGTTCCTGTCAACAAGCACTTCTTGGTATCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR GCA 72 bp | TGGTTCTCTAAACAATTGGACCCTCCTCTTAGCCTCTaGAGCACTAAGGGGAGCTATTCCTGTACCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WFSKQLDPPLSL*STKGSYSCTFP Trigger: AGGAAAGGTACAGGAATAGCTCCCCTTAGTGCTGCAGAGGCTAAGAGGAGGGTCCAATTGTTTAGAGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTATGGTTCTCTAAACAATaGGACCCTCCTCTTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WALETQVPSYQNRLGGHLWFSKQ*DPPLSL Trigger: GAGGCTAAGAGGAGGGTCCAATTGTTTAGAGAACCA...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAAGCAAGAGTAACACATaGACTTCCCAAGACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WALETQVPSYQNRLGGHLSKSNT*TSQDKG Trigger: TCCCTTGTCTTGGGAAGTCAATGTGTTACTCTTGCT...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | GTCTGCCTACCTTCACAATATGCAATCCAGGTGAGTTaGGGATGCTCAGAAGACTATGTGCCACATAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VCLPSQYAIQVS*GCSEDYVPHSH Trigger: ATGGCTATGTGGCACATAGTCTTCTGAGCATCCTCAACTCACCTGGATTGCATATTGTGAAGGTAGGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTAGTTATAGAAGTCTTTaGGATTGGAGACCTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGSYRSL*DWRPRK Trigger: CTTCCTAGGTCTCCAATCCAAAAGACTTCTATAACT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTATTATGGCTATTAGGGTaGTGCTCAAATGGATCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WALETQVPSYQNRLGGHLLWLLG*CSNGSQ Trigger: TTGGGATCCATTTGAGCACAACCCTAATAGCCATAA...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | TGTCAATATAGTGGCTCATGTTACCACATAAGACCTTaGAGTCATCCCTGGTCTGGGTTGCTTCTGGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: CQYSGSCYHIRP*SHPWSGLLLDH Trigger: ATGGTCCAGAAGCAACCCAGACCAGGGATGACTTCAAGGTCTTATGTGGTAACATGAGCCACTATATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR GCA 72 bp | CTGAAGATTACACATATAGGGAACCATGGCTTCGGCTaGATATGTAGCATAAGCTGGCATTGTCTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LKITHIGNHGFG*ICSISWHCLAS Trigger: TGATGCCAGACAATGCCAGCTTATGCTACATATGCAGCCGAAGCCATGGTTCCCTATATGTGTAATCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | GATTCCAGGAAAGCAAGAGGCTCCAAGGAACCAGTATaGATGAGATTAGCTGAAATACCAAACAAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSRKARGSKEPV*MRLAEIPNKGE Trigger: CTCCCCTTTGTTTGGTATTTCAGCTAATCTCATCCATACTGGTTCCTTGGAGCCTCTTGCTTTCCTGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | AAGAGGCTCCAAGGAACCAGTATGGATGAGATTAGCTaGAATACCAAACAAAGGGGAGAGAGATCCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KRLQGTSMDEIS*NTKQRGERSCT Trigger: TGTACAGGATCTCTCTCCCCTTTGTTTGGTATTTCAGCTAATCTCATCCATACTGGTTCCTTGGAGCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | AAAAAGAAACCGCATCAGGTTAGGGAGAGATGGGGATaGTATACAGATGGTCAGGAATTTGAACAGAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKKPHQVRERWG*YTDGQEFEQRC Trigger: ACACCTCTGTTCAAATTCCTGACCATCTGTATATCATCCCCATCTCTCCCTAACCTGATGCGGTTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR GCA 72 bp | GCTCAGAAGACTATGTGCCACATAGCCATTATGATGTaGAAGTATGTGGTGGACAGATGGAAGAGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AQKTMCHIAIMM*KYVVDRWKRKK Trigger: TTTCTTTCTCTTCCATCTGTCCACCACATACTTGCACATCATAATGGCTATGTGGCACATAGTCTTCTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | CCACCAAATGAAGCTTTTCAGAACCATAATGGGTTATaGCTATTAGGGTTGTGCTCAAATGGATCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPNEAFQNHNGL*LLGLCSNGSQV Trigger: CACTTGGGATCCATTTGAGCACAACCCTAATAGCCATAACCCATTATGGTTCTGAAAAGCTTCATTTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CAA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATCACATGCACTCAACATaGACCCAGAAGCTAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: HIARIVPGTHPSQHTYKYHMHST*TQKLDD Trigger: ATCATCTAGCTTCTGGGTCAATGTTGAGTGCATGTG...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR-3UTR CAA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATAGATCAGCACCTTGTTaGGCCATCATCAGAAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: HIARIVPGTHPSQHTYKYRSAPC*AIIRRF Trigger: GAATCTTCTGATGATGGCCAAACAAGGTGCTGATCT...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATCAGCAAAACCAGGAGTaGGTTCTTTGGGGAAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: HIARIVPGTHPSQHTYKYQQNQE*VLWGNQ Trigger: TTGATTTCCCCAAAGAACCAACTCCTGGTTTTGCTG...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | GTAGGACTAGAACTTCAAGTCTCTGAAGAAAGAAATTaGAGATCTCAGATGGAAAGATCTCCCATGCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: VGLELQVSEERN*RSQMERSPMLM Trigger: CATGAGCATGGGAGATCTTTCCATCTGAGATCTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTAGTCCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR GCA 72 bp | TTTCAGAACCATAATGGGTTATGGCTATTAGGGTTGTaGTCAAATGGATCCCAAGTGAATTCTCCAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: FQNHNGLWLLGL*SNGSQVNSPNH Trigger: ATGGTTTGGAGAATTCACTTGGGATCCATTTGAGCACAACCCTAATAGCCATAACCCATTATGGTTCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | TATCTTGTTATAAGTAATGCCCTCTTTCTGCTGGGATaGATTTACCCCTTTACTGTTCTTAAAACCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: YLVISNALFLLG*IYPFTVLKTTM Trigger: CATTGTGGTTTTAAGAACAGTAAAGGGGTAAATTCATCCCAGCAGAAAGAGGGCATTACTTATAACAAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CCA 72 bp | TTAATATTCTTGGATGCATATTGCAAGAATTGTTCCTaGGACCCACCCTTCTCAACATACATACAAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: LIFLDAYCKNCS*DPPFSTYIQIC Trigger: ACATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATGCATCCAAGAATATTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR TCA 72 bp | AGATGTTTAGACAGATGGTGCTCTTTATCCGTCTGCTaGATGAGCATCCTTTTAGATATGTCTATTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RCLDRWCSLSVC*MSILLDMSIIN Trigger: ATTTATAATAGACATATCTAAAAGGATGCTCATTCAGCAGACGGATAAAGAGCACCATCTGTCTAAACATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR CCA 90 bp | GAATTTGCCCCACCATTCTTCTTCCATGAGGTGGTAGCCGCATGGGGTAGATCCTGCTGCTCTGGCCTCTaGTTGAAGTCCCAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EFAPPFFFHEVVAAWGRSCCSGL*LKSQAP Trigger: GGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCA...GGATCTACCCCATGCGGCTACCACCTCATGGAAGAAGAATGGTGGGGCAAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CAA 72 bp | TGTCCTGCCCCTAACTGGCTGTGGTTCTCTAAACAATaGGACCCTCCTCTTAGCCTCTGCAGCACTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPAPNWLWFSKQ*DPPLSLCSTKG Trigger: CCCCTTAGTGCTGCAGAGGCTAAGAGGAGGGTCCAATTGTTTAGAGAACCACAGCCAGTTAGGGGCAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CAA 72 bp | GATGCCAAGAGGTTCACCAGCCACCATGGAGAACTGTaGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DAKRFTSHHGEL*GFRNPGAFLSE Trigger: TTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCAACAGTTCTCCATGGTGGCTGGTGAACCTCTTGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CAA 72 bp | AGAAGACGTACAGAATCAACTGACCTCAGCCCATGGTaGATCACCAACACTGAACCACCAACCAACGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRRTESTDLSPW*ITNTEPPTNGH Trigger: ATGCCCGTTGGTTGGTGGTTCAGTGTTGGTGATCAACCATGGGCTGAGGTCAGTTGATTCTGTACGTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR GCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTGAGAATTGTGTTTGCTaGTCTGGCCTCTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHCIGQPTDVSFGSGGESENCVC*SGLWLK Trigger: CTTCAACCAGAGGCCAGAGCAGCAAACACAATTCTC...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR CCA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGGTCCCAGGCTCCCATTaGACCTGTGAATGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YACPMRGLMCQSLTNTKVVPGSH*TCECVS Trigger: TGAAACACATTCACAGGTCCAATGGGAGCCTGGGAC...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| 3UTR CAA 72 bp | GCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTaGGGAGGACATCTAGAGGTCTGCCTACCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALETQVPSYQNR*GGHLEVCLPSQ Trigger: TTGTGAAGGTAGGCAGACCTCTAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAAATGTTGGCCACAGCTaGAATACCAACCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WALETQVPSYQNRLGGHLNVGHS*NTNLAK Trigger: CTTTGCCAGGTTGGTATTGCAGCTGTGGCCAACATT...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTACATGAGAATTGTGTTTaGTGCTCTGGCCTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WALETQVPSYQNRLGGHLHENCV*CSGLWL Trigger: CAACCAGAGGCCAGAGCAGCAAACACAATTCTCATG...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTACAGCCAAAATTTCACTaGCATGCCTCAACCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: WALETQVPSYQNRLGGHLQPKFH*HASTIH Trigger: GTGTATGGTTGAGGCATGTCAGTGAAATTTTGGCTG...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR GCA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTAATGGTGGGGAAACTTaGAGCCAAAATTTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGNGGET*SQNFTD Trigger: GTCAGTGAAATTTTGGCTGCAAGTTTCCCCACCATT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAAAGAATGACATGTTTTaGTCTCAGTTGAGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WALETQVPSYQNRLGGHLKNDMF*SQLRAS Trigger: GCTGGCCCTCAACTGAGACCAAAACATGTCATTCTT...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
||
| CDS-3UTR CCA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTTTAAGGGAGAAATGGTaGGGAAACTTGCAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHCIGQPTDVSFGSGGESLREKW*GNLQPK Trigger: TTTTGGCTGCAAGTTTCCCCACCATTTCTCCCTTAA...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR TCA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGTGGAGGTATTTCCTCTaGGTATCACTCTACTCCATT | + |
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Preference number: 4 (lower is better) Translates to: YACPMRGLMCQSLTNTKVWRYFL*VSLYSI Trigger: AATGGAGTAGAGTGATACTCAGAGGAAATACCTCCA...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR TCA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGATCGTAAGAAGACCATaGCTAACTCGAAACCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: YACPMRGLMCQSLTNTKVIVRRP*LTRNQS Trigger: ACTCTGGTTTCGAGTTAGTCATGGTCTTCTTACGAT...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR TCA 90 bp | TGGGCTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGAGGACATCTAGTTTATCCCTTTGGCTaGTATTTTTCTAGGACCCCT | + |
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Preference number: 4 (lower is better) Translates to: WALETQVPSYQNRLGGHLVYPFG*YFSRTP Trigger: AGGGGTCCTAGAAAAATATCAGCCAAAGGGATAAAC...TAGATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CCA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTATTGTCTGTGTTCCATaGACCACTGATTTTTATAGG | + |
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Preference number: 4 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGIVCVP*TTDFYR Trigger: CCTATAAAAATCAGTGGTCCATGGAACACAGACAAT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATTTGTGTTTGCTGCTCTaGCCTCTGGTTGAAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HIARIVPGTHPSQHTYKYLCLLL*PLVEVP Trigger: TGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAA...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | TTACTTACTCAGACCCCCATACTTTGTTTACCAGCATaGTTTCTGGTGGTGGGGAAATATCCAGTCACCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLTQTPILCLPA*FLVVGKYPVTL Trigger: TAAGGTGACTGGATATTTCCCCACCACCAGAAACAATGCTGGTAAACAAAGTATGGGGGTCTGAGTAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | GCTTTTCAGAACCATAATGGGTTATGGCTATTAGGGTaGTGCTCAAATGGATCCCAAGTGAATTCTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: AFQNHNGLWLLG*CSNGSQVNSPN Trigger: GTTTGGAGAATTCACTTGGGATCCATTTGAGCACAACCCTAATAGCCATAACCCATTATGGTTCTGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | CAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTTaGAAGCCCCATAAGAAGAACAACAATATCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: QGLEKGLKEPKG*KPHKKNNNIKQ Trigger: TTGTTTGATATTGTTGTTCTTCTTATGGGGCTTCAAACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CCA 90 bp | CATATTGCAAGAATTGTTCCTGGGACCCACCCTTCTCAACATACATACAAATATAACTGTCATATTGCTTaGAAACCCAGTGAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: HIARIVPGTHPSQHTYKYNCHIA*KPSEED Trigger: ATCCTCCTCACTGGGTTTCCAAGCAATATGACAGTT...ATATTTGTATGTATGTTGAGAAGGGTGGGTCCCAGGAACAATTCTTGCAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTACATTAAGGGAGAAATaGTGGGGAAACTTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HNELTYHRTVYTQKALYPTLREK*WGNLQP Trigger: TGGCTGCAAGTTTCCCCACCATTTCTCCCTTAATGT...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | CATCAAATCCCTTTCTTCAGGAGTTATAGAAGTCTTTaGGATTGGAGACCTAGGAAGTATAAGAGCGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HQIPFFRSYRSL*DWRPRKYKSER Trigger: CCTTTCGCTCTTATACTTCCTAGGTCTCCAATCCAAAAGACTTCTATAACTCCTGAAGAAAGGGATTTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | ATCATATTCAGCTACACTTATAGATCAGCACCTTGTTaGGCCATCATCAGAAGATTCCTTTTCCAGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: IIFSYTYRSAPC*AIIRRFLFQQI Trigger: TATCTGCTGGAAAAGGAATCTTCTGATGATGGCCAAACAAGGTGCTGATCTATAAGTGTAGCTGAATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTTTGCCCACAGTAATGTaGGCAAGAATGACATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: HNELTYHRTVYTQKALYPLPTVM*ARMTCF Trigger: AAAACATGTCATTCTTGCCCACATTACTGTGGGCAA...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR GCA 90 bp | CACAATGAGCTCACATATCACAGGACAGTGTATACACAAAAAGCATTATATCCTAAAATTTCACTGACATaGCTCAACCATACACGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HNELTYHRTVYTQKALYPKISLT*LNHTRK Trigger: TTTTCGTGTATGGTTGAGGCATGTCAGTGAAATTTT...AGGATATAATGCTTTTTGTGTATACACTGTCCTGTGATATGTGAGCTCATTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| 3UTR CAA 72 bp | GGAAAATTCATAGCTCTGATTGCCTCCATAAAGAAATaGAAGAGAGCATATACTAGCAGCTTAACAGTACAT | + |
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Preference number: 4 (lower is better) Translates to: GKFIALIASIKK*KRAYTSSLTVH Trigger: ATGTACTGTTAAGCTGCTAGTATATGCTCTCTTCAATTTCTTTATGGAGGCAATCAGAGCTATGAATTTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS CCA 90 bp | TTGTGTTTGCTGCTCTGGCCTCTGGTTGAAGTCCCAGGCTCCCATTaGACCTGTGAATGTGTTTCAGGCTTTGGTGATGTCTATACAAGA | + |
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Preference number: 5 (lower is better) Translates to: LCLLLWPLVEVPGSH*TCECVSGFGDVYTR Trigger: TCTTGTATAGACATCACCAAAGCCTGAAACACATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CCA 90 bp | AAATGTGATCATCAGCATGAGAATTGTGTTTGCTGCTCTGGCCTCTaGTTGAAGTCCCAGGCTCCCATTGGACCTGTGAATGTGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KCDHQHENCVCCSGL*LKSQAPIGPVNVFQ Trigger: CTGAAACACATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAATTCTCATGCTGATGATCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS-3UTR CAA 90 bp | GCACATTGTATAGGACAACCCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTAGGATAATCAAGAGATaGCCCACAGTAATGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: AHCIGQPTDVSFGSGGESRIIKR*PTVMWA Trigger: TGCCCACATTACTGTGGGCAATCTCTTGATTATCCT...ACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTTGTCCTATACAATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CAA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGTTCGGGTCAGTGTTATaGTCTGTGTTCCATGGACCA | + |
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Preference number: 5 (lower is better) Translates to: YACPMRGLMCQSLTNTKVFGSVL*SVFHGP Trigger: TGGTCCATGGAACACAGACAATAACACTGACCCGAA...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CAA 90 bp | AGCATGGGCTCCAAAATGCAGGGGTTAGAGAAAGGATTGAAGGAGCCAAAGGGTACAAAAACTGTCATATaGCTTGGAAACCCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SMGSKMQGLEKGLKEPKGTKTVI*LGNPVR Trigger: CCTCACTGGGTTTCCAAGCAATATGACAGTTTTTGT...ACCCTTTGGCTCCTTCAATCCTTTCTCTAACCCCTGCATTTTGGAGCCCATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS-3UTR CAA 90 bp | TATGCCTGTCCTATGAGAGGTCTTATGTGCCAGAGCCTGACAAACACAAAGGTGTCTGTGTTTATCCCTTaGGCTGATATTTTTCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: YACPMRGLMCQSLTNTKVSVFIP*ADIFLG Trigger: TCCTAGAAAAATATCAGCCAAAGGGATAAACACAGA...CACCTTTGTGTTTGTCAGGCTCTGGCACATAAGACCTCTCATAGGACAGGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228331.2 |
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| CDS CAA 72 bp | CAGCATGAGAATTGTGTTTGCTGCTCTGGCCTCTGGTaGAAGTCCCAGGCTCCCATTGGACCTGTGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: QHENCVCCSGLW*KSQAPIGPVNV Trigger: CACATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAATTCTCATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CCA 72 bp | CATCAGCATGAGAATTGTGTTTGCTGCTCTGGCCTCTaGTTGAAGTCCCAGGCTCCCATTGGACCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: HQHENCVCCSGL*LKSQAPIGPVN Trigger: ATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAATTCTCATGCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CAA 90 bp | TGTGATCATCAGCATGAGAATTGTGTTTGCTGCTCTGGCCTCTGGTaGAAGTCCCAGGCTCCCATTGGACCTGTGAATGTGTTTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CDHQHENCVCCSGLW*KSQAPIGPVNVFQA Trigger: AGCCTGAAACACATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCAAACACAATTCTCATGCTGATGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CAA 90 bp | AAGAAGACCATGACTAACTCGAAACCAGAGTTAGAACATACCCACTaGCTGTTCGGGTCAGTGTTATTGTCTGTGTTCCATGGACCACTG | + |
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Preference number: 6 (lower is better) Translates to: KKTMTNSKPELEHTH*LFGSVLLSVFHGPL Trigger: CAGTGGTCCATGGAACACAGACAATAACACTGACCCGAACAGCAAGTGGGTATGTTCTAACTCTGGTTTCGAGTTAGTCATGGTCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CAA 72 bp | TTAGAACATACCCACTTGCTGTTCGGGTCAGTGTTATaGTCTGTGTTCCATGGACCACTGATTTTTATAGGG | + |
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Preference number: 6 (lower is better) Translates to: LEHTHLLFGSVL*SVFHGPLIFIG Trigger: CCCTATAAAAATCAGTGGTCCATGGAACACAGACAATAACACTGACCCGAACAGCAAGTGGGTATGTTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CAA 72 bp | ATGACTAACTCGAAACCAGAGTTAGAACATACCCACTaGCTGTTCGGGTCAGTGTTATTGTCTGTGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: MTNSKPELEHTH*LFGSVLLSVFH Trigger: ATGGAACACAGACAATAACACTGACCCGAACAGCAAGTGGGTATGTTCTAACTCTGGTTTCGAGTTAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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| CDS CCA 72 bp | CTTGCTGTTCGGGTCAGTGTTATTGTCTGTGTTCCATaGACCACTGATTTTTATAGGGATGTAGACATTATT | + |
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Preference number: 6 (lower is better) Translates to: LAVRVSVIVCVP*TTDFYRDVDII Trigger: AATAATGTCTACATCCCTATAAAAATCAGTGGTCCATGGAACACAGACAATAACACTGACCCGAACAGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167551.2 ENSMUST00000228331.2 |
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