Pregenerated sensors for VMN1R173 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000115021Ensembl transcript IDs: ENSMUST00000174055.3, ENSMUST00000226233.2, ENSMUST00000227987.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACAGATGTCTCATTTGGCTCAGGTGGGGAGAGTACTCCCTGTGTaGGCAGGTGGAGGATGCCAAGAGGTTCACCAGCCACCATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: PQMSHLAQVGRVLPV*AGGGCQEVHQPPWR Trigger: TCTCCATGGTGGCTGGTGAACCTCTTGGCATCCTCCACCTGCCCACACAGGGAGTACTCTCCCCACCTGAGCCAAATGAGACATCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CCA 90 bp | AGCATATTGTATAGGACCACCCACAGATGTCTCATTTGGCTCAGGTaGGGAGAGTACTCCCTGTGTGGGCAGGTGGAGGATGCCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SILYRTTHRCLIWLR*GEYSLCGQVEDAKR Trigger: CCTCTTGGCATCCTCCACCTGCCCACACAGGGAGTACTCTCCCCACCTGAGCCAAATGAGACATCTGTGGGTGGTCCTATACAATATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CCA 90 bp | CATGTAGATGTCCAAGTGCAGTGCAGAGCTTGTCCTGCCCCTAACTaGCTGTGGTTCTCTGAACAATTGGACCCTCCTCTTAGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HVDVQVQCRACPAPN*LWFSEQLDPPLSLC Trigger: GCAGAGGCTAAGAGGAGGGTCCAATTGTTCAGAGAACCACAGCCAGTTAGGGGCAGGACAAGCTCTGCACTGCACTTGGACATCTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CCA 90 bp | AGGTGGAGGATGCCAAGAGGTTCACCAGCCACCATGGAGAACTGTTaGGTTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: RWRMPRGSPATMENC*VLETQVPSYQNRLG Trigger: TCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAACCCAACAGTTCTCCATGGTGGCTGGTGAACCTCTTGGCATCCTCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR GCA 90 bp | AACGAACAACTGAAGATTACACATATAGGGAACCATGGCTTCGGCTaGATATGTAGCATAAGCTGGCATTGTCTGGCATCAAGAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NEQLKITHIGNHGFG*ICSISWHCLASRGG Trigger: TCCTCCTCTTGATGCCAGACAATGCCAGCTTATGCTACATATGCAGCCGAAGCCATGGTTCCCTATATGTGTAATCTTCAGTTGTTCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR TCA 90 bp | GCTGTGGCAGTGCTGCAGAGCTCATTCTGCATGGGGAAGAGCTGTTaGGCTGTATCTATAATGTATCTATTATCCAAGCACAGATTTAGA | + |
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Preference number: 1 (lower is better) Translates to: AVAVLQSSFCMGKSC*AVSIMYLLSKHRFR Trigger: TCTAAATCTGTGCTTGGATAATAGATACATTATAGATACAGCTCAACAGCTCTTCCCCATGCAGAATGAGCTCTGCAGCACTGCCACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR TCA 90 bp | CATTTAGAGGTCTGCCTACCTTCACAATATGCAATCCAGGTGAGTTaGGGATGCTCAGAAGACTATGTGCCACATAGCCATTATGATGTG | + |
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Preference number: 1 (lower is better) Translates to: HLEVCLPSQYAIQVS*GCSEDYVPHSHYDV Trigger: CACATCATAATGGCTATGTGGCACATAGTCTTCTGAGCATCCTCAACTCACCTGGATTGCATATTGTGAAGGTAGGCAGACCTCTAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR TCA 90 bp | TACAACAAAGAATATCTGAGAGAAAACCCAAAAAGGATCCAATATTaGTGGTGTGGCAGAAGTCATAGGCCTGAATATTTGCAAGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: YNKEYLRENPKRIQY*WCGRSHRPEYLQVK Trigger: CTTTACTTGCAAATATTCAGGCCTATGACTTCTGCCACACCATCAATATTGGATCCTTTTTGGGTTTTCTCTCAGATATTCTTTGTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR GCA 90 bp | CTGAAGAAAGAAATTGAAGATCTCAGAAGATGGAAAGATCTCCAATaGTCATGGATTGGAAGGATTAATATGAGAAAAATGACCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: LKKEIEDLRRWKDLQ*SWIGRINMRKMTIL Trigger: CAAGATGGTCATTTTTCTCATATTAATCCTTCCAATCCATGAGCATTGGAGATCTTTCCATCTTCTGAGATCTTCAATTTCTTTCTTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAATGTCCGGTCAATGAGGTAGGAGTGGGCGGGCAGATGGGGGAGTGGGTAACACTCAGTCCTAGATaGGATGCCTTCATCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: GECPVNEVGVGGQMGEWVTLSPR*DAFIKS Trigger: GGATTTGATGAAGGCATCCCATCTAGGACTGAGTGT...TACCCACTCCCCCATCTGCCCGCCCACTCCTACCTCATTGACCGGACATTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CAA 90 bp | TGCAGAGCTTGTCCTGCCCCTAACTGGCTGTGGTTCTCTGAACAATaGGACCCTCCTCTTAGCCTCTGCAGCACTAAGGGTAGCTATTCC | + |
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Preference number: 2 (lower is better) Translates to: CRACPAPNWLWFSEQ*DPPLSLCSTKGSYS Trigger: GGAATAGCTACCCTTAGTGCTGCAGAGGCTAAGAGGAGGGTCCAATTGTTCAGAGAACCACAGCCAGTTAGGGGCAGGACAAGCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTAGAAAGGACTGCCTCTaGCTCTGCTGCCCAACTTTA | + |
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Preference number: 2 (lower is better) Translates to: LASRGGEALGPVKARYPSRKDCL*LCCPTL Trigger: TAAAGTTGGGCAGCAGAGTCAGAGGCAGTCCTTTCT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAATGTCCGGTCAATGAGGTAGGAGTGGGCGGGCAGATGGGGGAGTGGGTATCATACTATGTCACATaGCCCAAACTCATAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: GECPVNEVGVGGQMGEWVSYYVT*PKLIKT Trigger: TGTCTTTATGAGTTTGGGGCATGTGACATAGTATGA...TACCCACTCCCCCATCTGCCCGCCCACTCCTACCTCATTGACCGGACATTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTCAAATGGATCCCAAGTaGATTCTCCAAACCATCCGG | + |
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Preference number: 2 (lower is better) Translates to: LASRGGEALGPVKARYPSQMDPK*ILQTIR Trigger: CCGGATGGTTTGGAGAATTCACTTGGGATCCATTTG...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTATAATAAGGGATGGATaGCAGAGGGGAAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LASRGGEALGPVKARYPSIIRDG*QRGRAW Trigger: CCATGCTCTTCCCCTCTGTCATCCATCCCTTATTAT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTGTAAGAGTAACACATTaGCTTCCCAAGACAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LASRGGEALGPVKARYPSVRVTH*LPKTRE Trigger: TTCCCTTGTCTTGGGAAGTCAATGTGTTACTCTTAC...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTAGAGTGAGATACTTTTaGACACTCAGTCCTAGATGG | + |
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Preference number: 2 (lower is better) Translates to: LASRGGEALGPVKARYPSRVRYF*TLSPRW Trigger: CCATCTAGGACTGAGTGTTCAAAAGTATCTCACTCT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGATAATAAGGGATGGATaGCAGAGGGGAAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGIIRDG*QRGRAW Trigger: CCATGCTCTTCCCCTCTGTCATCCATCCCTTATTAT...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAGGAGTGGGTAGGAGATaGGGGTTCCAGAGGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEGVGRR*GFQRGD Trigger: GTCTCCCCTCTGGAACCCTCATCTCCTACCCACTCC...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGAGGAGCCAAAGGGTTTaGAGCCCCATAAGAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGRSQRV*SPIRRT Trigger: TGTTCTTCTTATGGGGCTTCAAACCCTTTGGCTCCT...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGCTTGCCCCAAGGGCATaGGAAGGTGAGAGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLLAPRA*EGESWP Trigger: GGGCCAGCTCTCACCTTCTCATGCCCTTGGGGCAAG...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGAATGGAACACATTCCTaGAACTGGCTGGTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGNGTHS*NWLVKK Trigger: CTTCTTCACCAGCCAGTTTCAGGAATGTGTTCCATT...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR CCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATTTCCTGTACCTTTCCTaGGCAGGAAACACAGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYFLYLS*AGNTVV Trigger: CACTACTGTGTTTCCTGCCCAGGAAAGGTACAGGAA...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CAA 90 bp | AACTGTTGGGTTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTaGGGAGGACATTTAGAGGTCTGCCTACCTTCACAATATGCAATC | + |
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Preference number: 2 (lower is better) Translates to: NCWVLETQVPSYQNR*GGHLEVCLPSQYAI Trigger: GATTGCATATTGTGAAGGTAGGCAGACCTCTAAATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAACCCAACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATGCATGGGGCATCAAATaGAGAGGGGCAGTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GVTHLQILNPEGLLYKENAWGIK*RGAVKK Trigger: CTTCTTCACTGCCCCTCTTCATTTGATGCCCCATGC...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAACCTCAGCCCATGGTTaGTCACCAACACTGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLETSAHG*SPTLNH Trigger: GTGGTTCAGTGTTGGTGATCAACCATGGGCTGAGGT...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGAGGAGCCAAAGGGTTTaGAGCCCCATAAGAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMRSQRV*SPIRRT Trigger: TGTTCTTCTTATGGGGCTTCAAACCCTTTGGCTCCT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGGCATGGGGCATCAAATaGAGAGGGGCAGTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLAWGIK*RGAVKK Trigger: CTTCTTCACTGCCCCTCTTCATTTGATGCCCCATGC...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGCTGGCTGTGGTTCTCTaGACAATTGGACCCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLLAVVL*TIGPSS Trigger: AGAGGAGGGTCCAATTGTTCAGAGAACCACAGCCAG...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATTTCAGGGTCTCTGGATaGCAATCTGACATAGATATA | + |
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Preference number: 2 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYFRVSG*QSDIDI Trigger: TATATCTATGTCAGATTGTCATCCAGAGACCCTGAA...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATATGGCCAATACAAAATaGACTTACTGGCATCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYMANTK*TYWHPL Trigger: TAAGGGATGCCAGTAAGTTCATTTTGTATTGGCCAT...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGAGAGTGAGATACTTTTaGACACTCAGTCCTAGATGG | + |
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Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMRVRYF*TLSPRW Trigger: CCATCTAGGACTGAGTGTTCAAAAGTATCTCACTCT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAACAAATGGATCCCAAGTaGATTCTCCAAACCATCCGG | + |
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Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEQMDPK*ILQTIR Trigger: CCGGATGGTTTGGAGAATTCACTTGGGATCCATTTG...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAAACCTCAGCCCATGGTTaGTCACCAACACTGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: RSKAAGFLQQRISERKPKTSAHG*SPTLNH Trigger: GTGGTTCAGTGTTGGTGATCAACCATGGGCTGAGGT...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATCAAAATGTGGAGTGGTaGCTAAAGGAAAGGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GVTHLQILNPEGLLYKENQNVEW*LKERPS Trigger: GGATGGCCTTTCCTTTAGTCACCACTCCACATTTTG...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAGACAGGAACCTGATATaGCTGTCCTATGAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEDRNLI*LSYERS Trigger: AGACCTCTCATAGGACAGGCATATCAGGTTCCTGTC...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGAACAAGTCATTCTTATaGGTAGGCCCCATGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMNKSFL*VGPMQI Trigger: GATTTGCATGGGGCCTACCCATAAGAATGACTTGTT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCACATATACACTCCAAGAAAATGAGAGTTTATGCACTAGACCTTCATGGTTGGGATTACTGTGTGTaGAAACGTGTGTGTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: HAHIHSKKMRVYALDLHGWDYCV*KRVCLC Trigger: ACACAGACACACACGTTTTCACACACAGTAATCCCA...ACCATGAAGGTCTAGTGCATAAACTCTCATTTTCTTGGAGTGTATATGTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATAAACAGTATCTGCCCTaGTTGAAGGACCATCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KQKQRDYVARSGHRFPPNKQYLP*LKDHPL Trigger: CAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTT...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGACGTACAGAATCAACTaGCCTCAGCCCATGGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLTYRIN*PQPMVD Trigger: ATCAACCATGGGCTGAGGTCAGTTGATTCTGTACGT...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAATTATGTGCCAGAGCCTaGCAAACACAAAGGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLELCARA*QTQRWI Trigger: AATCCACCTTTGTGTTTGTCAGGCTCTGGCACATAA...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGGATATGCCTGTCCTATaGGAGGTCTTATGTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLDMPVL*EVLCAR Trigger: TCTGGCACATAAGACCTCTCATAGGACAGGCATATC...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAGTAACCAAACAGTATCTGCCCTGATTGAAGGACCATCCTCTGAAATGGAAAATGAGAGTTTATaGACTAGACCTTCATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: HGSNQTVSALIEGPSSEMENESL*TRPSWF Trigger: GAACCATGAAGGTCTAGTGCATAAACTCTCATTTTC...CATTTCAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTTGGTTACTTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGTACTGTAGAGCACTCTaGATGCTAACAAAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMYCRAL*MLTKER Trigger: TCTTTCCTTTGTTAGCATGCAGAGTGCTCTACAGTA...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGTGGAAAGATCTCCAATaGTCATGGATTGGAAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMWKDLQ*SWIGRI Trigger: AATCCTTCCAATCCATGAGCATTGGAGATCTTTCCA...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAGTAAGAGTAACACATTaGCTTCCCAAGACAAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEVRVTH*LPKTRE Trigger: TTCCCTTGTCTTGGGAAGTCAATGTGTTACTCTTAC...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATAATGGAACACATTCCTaGAACTGGCTGGTGAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KQKQRDYVARSGHRFPPNNGTHS*NWLVKK Trigger: CTTCTTCACCAGCCAGTTTCAGGAATGTGTTCCATT...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGATTTGTAATGTGACCTaGCTAAAAGATATGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMICNVT*LKDMEH Trigger: GTGCTCCATATCTTTTAGGCAGGTCACATTACAAAT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAAGACAGGAACCTGATATaGCTGTCCTATGAGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RSKAAGFLQQRISERKPKDRNLI*LSYERS Trigger: AGACCTCTCATAGGACAGGCATATCAGGTTCCTGTC...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATAACAAGTCATTCTTATaGGTAGGCCCCATGCAAATC | + |
|
Preference number: 2 (lower is better) Translates to: GVTHLQILNPEGLLYKENNKSFL*VGPMQI Trigger: GATTTGCATGGGGCCTACCCATAAGAATGACTTGTT...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGCACATATACACTCCAAGAAAATGAGAGTTTATGCACTAGACCTTCATGGTTTCAGGGTCTCTGGATaGCAATCTGACATAGATATA | + |
|
Preference number: 2 (lower is better) Translates to: HAHIHSKKMRVYALDLHGFRVSG*QSDIDI Trigger: TATATCTATGTCAGATTGTCATCCAGAGACCCTGAA...ACCATGAAGGTCTAGTGCATAAACTCTCATTTTCTTGGAGTGTATATGTGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGATGGCCAATACAAAATaGACTTACTGGCATCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLMANTK*TYWHPL Trigger: TAAGGGATGCCAGTAAGTTCATTTTGTATTGGCCAT...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGGGGAAAGGGCATATATaGAGAGTTGGGGATATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLGKGHI*RVGDIN Trigger: ATTTATATCCCCAACTCTTCATATATGCCCTTTCCC...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAGAAAATGAGAGTTTATaGACTAGACCTTCATGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEENESL*TRPSWF Trigger: GAACCATGAAGGTCTAGTGCATAAACTCTCATTTTC...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATTCATACTATGTCACATaGCCCAAACTCATAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GVTHLQILNPEGLLYKENSYYVT*PKLIKT Trigger: TGTCTTTATGAGTTTGGGGCATGTGACATAGTATGA...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGAGCAAAACCAGGAGTTaGTTCTTTGAGGAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLSKTRS*FFEEIN Trigger: GTTGATTTCCTCAAAGAACCAACTCCTGGTTTTGCT...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTGTTTGTGATATGTAAGGTGGGTTCAAGGAACAATCAGAAGATGTTTCTGGATCTCCAATGCTCATaGATTGGAAGGATTAATATG | + |
|
Preference number: 2 (lower is better) Translates to: YVFVICKVGSRNNQKMFLDLQCS*IGRINM Trigger: CATATTAATCCTTCCAATCCATGAGCATTGGAGATC...CAGAAACATCTTCTGATTGTTCCTTGAACCCACCTTACATATCACAAACACATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAAATTTGTAATGTGACCTaGCTAAAAGATATGGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RSKAAGFLQQRISERKPKICNVT*LKDMEH Trigger: GTGCTCCATATCTTTTAGGCAGGTCACATTACAAAT...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CCA 72 bp | GTCCTGCCCCTAACTGGCTGTGGTTCTCTGAACAATTaGACCCTCCTCTTAGCCTCTGCAGCACTAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VLPLTGCGSLNN*TLLLASAALRV Trigger: TACCCTTAGTGCTGCAGAGGCTAAGAGGAGGGTCCAATTGTTCAGAGAACCACAGCCAGTTAGGGGCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CCA 72 bp | GCTTCCAGGAAAGCAAGAGGCTCCCAGGAACCAGTATaGATGAGATTAGCTGAAATGCCAAACAAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASRKARGSQEPV*MRLAEMPNKGE Trigger: CTCCCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCTTGCTTTCCTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CCA 72 bp | ATGCCAAGAGGTTCACCAGCCACCATGGAGAACTGTTaGGTTTTAGAAACCCAGGTGCCTTCCTATCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MPRGSPATMENC*VLETQVPSYQN Trigger: ATTCTGATAGGAAGGCACCTGGGTTTCTAAAACCCAACAGTTCTCCATGGTGGCTGGTGAACCTCTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR GCA 72 bp | GGGAGGACATTTAGAGGTCTGCCTACCTTCACAATATaGAATCCAGGTGAGTTGAGGATGCTCAGAAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: GRTFRGLPTFTI*NPGELRMLRRL Trigger: TAGTCTTCTGAGCATCCTCAACTCACCTGGATTGCATATTGTGAAGGTAGGCAGACCTCTAAATGTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGTGGTTCTCTGAACAATaGGACCCTCCTCTTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMWFSEQ*DPPLSL Trigger: GAGGCTAAGAGGAGGGTCCAATTGTTCAGAGAACCA...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | AAGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTaGAATGCCAAACAAAGGGGAGAGATATCCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KRLPGTSMDEIS*NAKQRGEISCT Trigger: TGTACAGGATATCTCTCCCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAAGAGGTTGGGATACATTaGGGAGGAAGCGAGGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEEVGIH*GGSEDR Trigger: CCTATCCTCGCTTCCTCCCAAATGTATCCCAACCTC...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGAAGTAACCAAACAGTATCTGCCCTGATTGAAGGACCATCCTCTGAAATGAGATATAGAAGACTTTaGGATTGGAGGCCTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGSNQTVSALIEGPSSEMRYRRL*DWRPRK Trigger: CTTCCTAGGCCTCCAATCCAAAAGTCTTCTATATCT...CATTTCAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTTGGTTACTTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | ACAAAGCTCATGGAAGTAACCAAACAGTATCTGCCCTaGTTGAAGGACCATCCTCTGAAATGGAACACATTC | + |
|
Preference number: 3 (lower is better) Translates to: TKLMEVTKQYLP*LKDHPLKWNTF Trigger: GAATGTGTTCCATTTCAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTTGGTTACTTCCATGAGCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | AAAAAGGGACCATATCAGGTTAGGGAGAGATGGGGATaGTATACAGATGGTCAGGAATTTGAACAGAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKGPYQVRERWG*YTDGQEFEQRC Trigger: ACACCTCTGTTCAAATTCCTGACCATCTGTATATCATCCCCATCTCTCCCTAACCTGATATGGTCCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGCCAGGAGTTGGTTCTTaGAGGAAATCAACAAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMPGVGS*RKSTSR Trigger: TCTACTTGTTGATTTCCTCAAAGAACCAACTCCTGG...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGGAATCTGGACACATCTaGATTCAGGAAAACGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMESGHI*IQENGF Trigger: AAATCCGTTTTCCTGAATCAAGATGTGTCCAGATTC...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCACATATACACTCCAAGAAAATGAGAGTTTATGCACTAGACCTTCATGGTAGTAAGAGTAACACATaGACTTCCCAAGACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HAHIHSKKMRVYALDLHGSKSNT*TSQDKG Trigger: TCCCTTGTCTTGGGAAGTCAATGTGTTACTCTTACT...ACCATGAAGGTCTAGTGCATAAACTCTCATTTTCTTGGAGTGTATATGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATAGATATAGAAGACTTTaGGATTGGAGGCCTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVTHLQILNPEGLLYKENRYRRL*DWRPRK Trigger: CTTCCTAGGCCTCCAATCCAAAAGTCTTCTATATCT...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | GTAGGACTAGTACTTCAAGTCTCTGAAGAAAGAAATTaGAGATCTCAGAAGATGGAAAGATCTCCAATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VGLVLQVSEERN*RSQKMERSPML Trigger: GAGCATTGGAGATCTTTCCATCTTCTGAGATCTTCAATTTCTTTCTTCAGAGACTTGAAGTACTAGTCCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | GAATATCTGAGAGAAAACCCAAAAAGGATCCAATATTaGTGGTGTGGCAGAAGTCATAGGCCTGAATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: EYLRENPKRIQY*WCGRSHRPEYL Trigger: CAAATATTCAGGCCTATGACTTCTGCCACACCATCAATATTGGATCCTTTTTGGGTTTTCTCTCAGATATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | AGATGTTTAGACAGATGGTGCTCTTTATCCGTCTGCTaGATGAGCATCCTTTTCGATGTGTCTATTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RCLDRWCSLSVC*MSILFDVSIIN Trigger: ATTTATAATAGACACATCGAAAAGGATGCTCATTCAGCAGACGGATAAAGAGCACCATCTGTCTAAACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CCA 72 bp | GAAGATCTCAGAAGATGGAAAGATCTCCAATGCTCATaGATTGGAAGGATTAATATGAGAAAAATGACCATC | + |
|
Preference number: 3 (lower is better) Translates to: EDLRRWKDLQCS*IGRINMRKMTI Trigger: GATGGTCATTTTTCTCATATTAATCCTTCCAATCCATGAGCATTGGAGATCTTTCCATCTTCTGAGATCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR TCA 72 bp | ATATATAGCCATAAAATATGTAGAGTGAGATACTTTTaGACACTCAGTCCTAGATGGGATGCCTTCATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IYSHKICRVRYF*TLSPRWDAFIK Trigger: TTTGATGAAGGCATCCCATCTAGGACTGAGTGTTCAAAAGTATCTCACTCTACATATTTTATGGCTATATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR GCA 72 bp | GAAATTGAAGATCTCAGAAGATGGAAAGATCTCCAATaGTCATGGATTGGAAGGATTAATATGAGAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: EIEDLRRWKDLQ*SWIGRINMRKM Trigger: CATTTTTCTCATATTAATCCTTCCAATCCATGAGCATTGGAGATCTTTCCATCTTCTGAGATCTTCAATTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CAA 72 bp | GATGCCAAGAGGTTCACCAGCCACCATGGAGAACTGTaGGGTTTTAGAAACCCAGGTGCCTTCCTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DAKRFTSHHGEL*GFRNPGAFLSE Trigger: TTCTGATAGGAAGGCACCTGGGTTTCTAAAACCCAACAGTTCTCCATGGTGGCTGGTGAACCTCTTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTACTCAAGCTTACAGTTaGGGTCATTTAGAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASRGGEALGPVKARYPSTQAYS*GHLEDS Trigger: GGAATCCTCTAAATGACCTCAACTGTAAGCTTGAGT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGATCGTAAGAAGACCATaGCTAACTCGAAACCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGIVRRP*LTRNQT Trigger: TGTCTGGTTTCGAGTTAGTCATGGTCTTCTTACGAT...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CAA 72 bp | GTTTTAGAAACCCAGGTGCCTTCCTATCAGAATAGGTaGGGAGGACATTTAGAGGTCTGCCTACCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VLETQVPSYQNR*GGHLEVCLPSQ Trigger: TTGTGAAGGTAGGCAGACCTCTAAATGTCCTCCCAACCTATTCTGATAGGAAGGCACCTGGGTTTCTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| 3UTR CAA 72 bp | TTACGTACTCAGACCCCCATACTTTGTTTACCAGCATaGTTTCTGGTGGTGGGGAAATATCCAGTCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRTQTPILCLPA*FLVVGKYPVTL Trigger: TAAGGTGACTGGATATTTCCCCACCACCAGAAACAATGCTGGTAAACAAAGTATGGGGGTCTGAGTACGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR TCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATATCGTAAGAAGACCATaGCTAACTCGAAACCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYIVRRP*LTRNQT Trigger: TGTCTGGTTTCGAGTTAGTCATGGTCTTCTTACGAT...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR GCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATAAGGGTGGGGAAACTTaGAGCCAAAATTTCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYKGGET*SQNFID Trigger: GTCAATGAAATTTTGGCTGCAAGTTTCCCCACCCTT...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR CCA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATATGAACATGGTATCATaGACAAATCGTAAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYMNMVS*TNRKKT Trigger: GGTCTTCTTACGATTTGTCCATGATACCATGTTCAT...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAACAGCCAAAATTTCATTaGCATGCCTCAACCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEQPKFH*HASTIH Trigger: GTGTATGGTTGAGGCATGTCAATGAAATTTTGGCTG...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGATGAACATGGTATCATaGACAAATCGTAAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMMNMVS*TNRKKT Trigger: GGTCTTCTTACGATTTGTCCATGATACCATGTTCAT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CCA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATTTAAGGGAGAAAGGGTaGGGAAACTTGCAGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KQKQRDYVARSGHRFPPNLREKG*GNLQPK Trigger: TTTTGGCTGCAAGTTTCCCCACCCTTTCTCCCTTAA...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR TCA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATACTCAAGCTTACAGTTaGGGTCATTTAGAGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: KQKQRDYVARSGHRFPPNTQAYS*GHLEDS Trigger: GGAATCCTCTAAATGACCTCAACTGTAAGCTTGAGT...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CAA 72 bp | ATTATATTCTGCTACACTCATAGATCAGCACCTTGTTaGGCCATCATCAGAAGATTCCTTTTCCAGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: IIFCYTHRSAPC*AIIRRFLFQQI Trigger: TATCTGCTGGAAAAGGAATCTTCTGATGATGGCCAAACAAGGTGCTGATCTATGAGTGTAGCAGAATATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR GCA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAAAAGGGTGGGGAAACTTaGAGCCAAAATTTCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: RSKAAGFLQQRISERKPKKGGET*SQNFID Trigger: GTCAATGAAATTTTGGCTGCAAGTTTCCCCACCCTT...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CCA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAATTGCCTACAGTAATGTaGGCAAGAATGACATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: NLMKLKRKHQNVMLQSLELPTVM*ARMTCF Trigger: AAAACATGTCATTCTTGCCCACATTACTGTAGGCAA...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CCA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAATTGCCTACAGTAATGTaGGCAAGAATGACATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RSKAAGFLQQRISERKPKLPTVM*ARMTCF Trigger: AAAACATGTCATTCTTGCCCACATTACTGTAGGCAA...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CAA 72 bp | TCAAGATGTCCTCCAATAGAACGGATACAGAAAATGTaGTATACTTACACAATGGATTACTACTCAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: SRCPPIERIQKM*YTYTMDYYSAT Trigger: AGTAGCTGAGTAGTAATCCATTGTGTAAGTATACAACATTTTCTGTATCCGTTCTATTGGAGGACATCTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| 3UTR CAA 72 bp | TGGATTGGAAGGATTAATATGAGAAAAATGACCATCTaGCTGAAAGCAATCTACAGACTCAATGCAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: WIGRINMRKMTI*LKAIYRLNAKQ Trigger: TTGTTTTGCATTGAGTCTGTAGATTGCTTTCAGCAAGATGGTCATTTTTCTCATATTAATCCTTCCAATCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | GGGGAATGTCCGGTCAATGAGGTAGGAGTGGGCGGGCAGATGGGGGAGTGGGTAGCAAAGCAAGATGATTaGAAGGGCCACTTCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GECPVNEVGVGGQMGEWVAKQDD*KGHFLS Trigger: ACTGAGGAAGTGGCCCTTCAAATCATCTTGCTTTGC...TACCCACTCCCCCATCTGCCCGCCCACTCCTACCTCATTGACCGGACATTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | GGGGAATGTCCGGTCAATGAGGTAGGAGTGGGCGGGCAGATGGGGGAGTGGGTATACTCAAGCTTACAGTaGAGGTCATTTAGAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: GECPVNEVGVGGQMGEWVYSSLQ*RSFRGF Trigger: GAATCCTCTAAATGACCTCAACTGTAAGCTTGAGTA...TACCCACTCCCCCATCTGCCCGCCCACTCCTACCTCATTGACCGGACATTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGTGCTCTGGCCTCTGGTaGAAGTCCCAGGCTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGCSGLW*KSQAPI Trigger: AATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCA...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTTTCAGGTCAGTGTCATaGTCTGTGTTCCATGGACCA | + |
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Preference number: 5 (lower is better) Translates to: LASRGGEALGPVKARYPSFRSVS*SVFHGP Trigger: TGGTCCATGGAACACAGACAATGACACTGACCTGAA...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | GTACCTAGAGTCACAGATAGCTATATGGTGCTATACAGGTGCTTGGATCCGTATTGCTCTGGCCTCTGGTaGAAGTCCCAGGCTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: VPRVTDSYMVLYRCLDPYCSGLW*KSQAPI Trigger: AATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCA...ATACGGATCCAAGCACCTGTATAGCACCATATAGCTATCTGTGACTCTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CCA 90 bp | TTGTGTATGCTGCTCTGGCCTCTGGTTGAAGTCCCAGGCTCCCATTaGACCTGTGAATGTGTTTCAGGCTTTGGTGATGTCTATACAAGA | + |
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Preference number: 5 (lower is better) Translates to: LCMLLWPLVEVPGSH*TCECVSGFGDVYTR Trigger: TCTTGTATAGACATCACCAAAGCCTGAAACACATTCACAGGTCCAATGGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCATACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTAGGATAATCAAGAGATaGCCTACAGTAATGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LASRGGEALGPVKARYPSRIIKR*PTVMWA Trigger: TGCCCACATTACTGTAGGCAATCTCTTGATTATCCT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CTGGCATCAAGAGGAGGAGAAGCACTTGGTCCTGTGAAGGCTAGATACCCCAGTACAAAAACTATGATATaGCTTGGAAACCCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LASRGGEALGPVKARYPSTKTMI*LGNPVR Trigger: CCTCACTGGGTTTCCAAGCAATATCATAGTTTTTGT...ACTGGGGTATCTAGCCTTCACAGGACCAAGTGCTTCTCCTCCTCTTGATGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS TCA 90 bp | ATGTTGGCCACAGCTGCAATACCAACCTGGCAAAGCAAGATGATTTaGAGGGCCACTTCCTCAGTGGTTTTCAGGGCTTTATTAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: MLATAAIPTWQSKMI*RATSSVVFRALLRA Trigger: TGCTCTTAATAAAGCCCTGAAAACCACTGAGGAAGTGGCCCTTCAAATCATCTTGCTTTGCCAGGTTGGTATTGCAGCTGTGGCCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CATGGAAGTAACCAAACAGTATCTGCCCTGATTGAAGGACCATCCTCTGAAATGGCAAAGCAAGATGATTaGAAGGGCCACTTCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: HGSNQTVSALIEGPSSEMAKQDD*KGHFLS Trigger: ACTGAGGAAGTGGCCCTTCAAATCATCTTGCTTTGC...CATTTCAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTTGGTTACTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CATGGAAGTAACCAAACAGTATCTGCCCTGATTGAAGGACCATCCTCTGAAATGTTCAGGTCAGTGTCATaGTCTGTGTTCCATGGACCA | + |
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Preference number: 5 (lower is better) Translates to: HGSNQTVSALIEGPSSEMFRSVS*SVFHGP Trigger: TGGTCCATGGAACACAGACAATGACACTGACCTGAA...CATTTCAGAGGATGGTCCTTCAATCAGGGCAGATACTGTTTGGTTACTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCTCCCAGGAACCAGTATGGATGAGATTAGCTGAAATGCCAAACAAAGGGAATGTGTTTCAGGCTTaGGTGATGTCTATACAAGAG | + |
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Preference number: 5 (lower is better) Translates to: RGSQEPVWMRLAEMPNKGNVFQA*VMSIQE Trigger: CTCTTGTATAGACATCACCAAAGCCTGAAACACATT...CCCTTTGTTTGGCATTTCAGCTAATCTCATCCATACTGGTTCCTGGGAGCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATATGTTTTGGTCTCAGTaGAGGGCCAGCAAAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: KQKQRDYVARSGHRFPPNMFWSQ*RASKVR Trigger: CCTAACTTTGCTGGCCCTCAACTGAGACCAAAACAT...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTATACAGGTGCTTGGATCCGTATTTAGGACCTCAATAAGAAAGCAAATGACAAAAACTATGATATaGCTTGGAAACCCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GAIQVLGSVFRTSIRKQMTKTMI*LGNPVR Trigger: CCTCACTGGGTTTCCAAGCAATATCATAGTTTTTGT...CATTTGCTTTCTTATTGAGGTCCTAAATACGGATCCAAGCACCTGTATAGCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AGATCAAAAGCTGCAGGATTTCTACAACAAAGAATATCTGAGAGAAAACCCAAAATGTTTTGGTCTCAGTaGAGGGCCAGCAAAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: RSKAAGFLQQRISERKPKMFWSQ*RASKVR Trigger: CCTAACTTTGCTGGCCCTCAACTGAGACCAAAACAT...TTTGGGTTTTCTCTCAGATATTCTTTGTTGTAGAAATCCTGCAGCTTTTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | GGAGTCACTCATCTCCAAATTCTTAACCCAGAAGGGCTTCTGTATAAAGAAAATGCAGCCAAAATTTCATaGACATGCCTCAACCATACA | + |
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Preference number: 5 (lower is better) Translates to: GVTHLQILNPEGLLYKENAAKIS*TCLNHT Trigger: TGTATGGTTGAGGCATGTCAATGAAATTTTGGCTGC...ATTTTCTTTATACAGAAGCCCTTCTGGGTTAAGAATTTGGAGATGAGTGACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | CATGCACATATACACTCCAAGAAAATGAGAGTTTATGCACTAGACCTTCATGGTGCAGCCAAAATTTCATaGACATGCCTCAACCATACA | + |
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Preference number: 5 (lower is better) Translates to: HAHIHSKKMRVYALDLHGAAKIS*TCLNHT Trigger: TGTATGGTTGAGGCATGTCAATGAAATTTTGGCTGC...ACCATGAAGGTCTAGTGCATAAACTCTCATTTTCTTGGAGTGTATATGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AACCTTATGAAGCTCAAGAGGAAACACCAAAATGTGATGCTTCAGTCCTTAGAATACTCAAGCTTACAGTaGAGGTCATTTAGAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: NLMKLKRKHQNVMLQSLEYSSLQ*RSFRGF Trigger: GAATCCTCTAAATGACCTCAACTGTAAGCTTGAGTA...TTCTAAGGACTGAAGCATCACATTTTGGTGTTTCCTCTTGAGCTTCATAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAAACAAAGGGATTATGTAGCAAGAAGTGGACACCGATTTCCACCAAATAATGTGTTTCAGGCTTaGGTGATGTCTATACAAGAG | + |
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Preference number: 5 (lower is better) Translates to: KQKQRDYVARSGHRFPPNNVFQA*VMSIQE Trigger: CTCTTGTATAGACATCACCAAAGCCTGAAACACATT...ATTTGGTGGAAATCGGTGTCCACTTCTTGCTACATAATCCCTTTGTTTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS GCA 72 bp | GCATACAAATGTGACCACCAGCATGAGAATTGTGTATaGTGCTCTGGCCTCTGGTTGAAGTCCCAGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AYKCDHQHENCV*CSGLWLKSQAP Trigger: GGGAGCCTGGGACTTCAACCAGAGGCCAGAGCAGCATACACAATTCTCATGCTGGTGGTCACATTTGTATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 90 bp | AAGAAGACCATGACTAACTCGAAACCAGACATAGAACATACCCACTaGCTGTTCAGGTCAGTGTCATTGTCTGTGTTCCATGGACCACTG | + |
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Preference number: 6 (lower is better) Translates to: KKTMTNSKPDIEHTH*LFRSVSLSVFHGPL Trigger: CAGTGGTCCATGGAACACAGACAATGACACTGACCTGAACAGCAAGTGGGTATGTTCTATGTCTGGTTTCGAGTTAGTCATGGTCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 72 bp | ATAGAACATACCCACTTGCTGTTCAGGTCAGTGTCATaGTCTGTGTTCCATGGACCACTGATTTTTATAGGG | + |
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Preference number: 6 (lower is better) Translates to: IEHTHLLFRSVS*SVFHGPLIFIG Trigger: CCCTATAAAAATCAGTGGTCCATGGAACACAGACAATGACACTGACCTGAACAGCAAGTGGGTATGTTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS TCA 72 bp | GTAATGTGGGCAAGAATGACATGTTTTGGTCTCAGTTaGGGGCCAGCAAAGTTAGGAGATAAATTATGGACA | + |
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Preference number: 6 (lower is better) Translates to: VMWARMTCFGLS*GPAKLGDKLWT Trigger: TGTCCATAATTTATCTCCTAACTTTGCTGGCCCTCAACTGAGACCAAAACATGTCATTCTTGCCCACATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CCA 72 bp | CTGGTCCATACCATGATGCTGATGAACATGGTATCATaGACAAATCGTAAGAAGACCATGACTAACTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LVHTMMLMNMVS*TNRKKTMTNSK Trigger: TTTCGAGTTAGTCATGGTCTTCTTACGATTTGTCCATGATACCATGTTCATCAGCATCATGGTATGGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 72 bp | TTGCTTGGAAACCCAGTGAGGAGGATAATCAAGAGATaGCCTACAGTAATGTGGGCAAGAATGACATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLGNPVRRIIKR*PTVMWARMTCF Trigger: AAAACATGTCATTCTTGCCCACATTACTGTAGGCAATCTCTTGATTATCCTCCTCACTGGGTTTCCAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 90 bp | CAGTTGAGGTCATTTAGAGGATTCCTTGGAACAAAAACTATGATATaGCTTGGAAACCCAGTGAGGAGGATAATCAAGAGATTGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: QLRSFRGFLGTKTMI*LGNPVRRIIKRLPT Trigger: TGTAGGCAATCTCTTGATTATCCTCCTCACTGGGTTTCCAAGCAATATCATAGTTTTTGTTCCAAGGAATCCTCTAAATGACCTCAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 90 bp | TTTGCACTTCGAGCCACCAGACGAATGAAGTACTCAAGCTTACAGTaGAGGTCATTTAGAGGATTCCTTGGAACAAAAACTATGATATTG | + |
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Preference number: 6 (lower is better) Translates to: FALRATRRMKYSSLQ*RSFRGFLGTKTMIL Trigger: CAATATCATAGTTTTTGTTCCAAGGAATCCTCTAAATGACCTCAACTGTAAGCTTGAGTACTTCATTCGTCTGGTGGCTCGAAGTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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| CDS CAA 72 bp | TCATTTAGAGGATTCCTTGGAACAAAAACTATGATATaGCTTGGAAACCCAGTGAGGAGGATAATCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SFRGFLGTKTMI*LGNPVRRIIKR Trigger: TCTCTTGATTATCCTCCTCACTGGGTTTCCAAGCAATATCATAGTTTTTGTTCCAAGGAATCCTCTAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000174055.3 ENSMUST00000226233.2 ENSMUST00000227987.2 |
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