Pregenerated sensors for VMN1R171 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062483Ensembl transcript IDs: ENSMUST00000078458.4, ENSMUST00000226128.2, ENSMUST00000226321.2, ENSMUST00000226733.2, ENSMUST00000226771.2, ENSMUST00000227386.2, ENSMUST00000227774.2, ENSMUST00000227866.2, ENSMUST00000228228.2, ENSMUST00000228484.2, ENSMUST00000228559.2, ENSMUST00000228674.2, ENSMUST00000228681.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGCGACCCCTTATAAGTTGCAGTTGCTCCAGGCCATGTGCTTCTaGTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: YATPYKLQLLQAMCF*SAFLPTPPHSSSSL Trigger: GAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATAAGGGGTCGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR GCA 90 bp | CTCCTTCTTCTCTCTCCCAACATTAAGCTCCACATTCCCTTCCTCTaGCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: LLLLSPNIKLHIPFL*PLQAQAFILPIKME Trigger: CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGAGAGAAGAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCACATTCCCTTCCTCTaGCCATTACAAGCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SALLSFQLLPIHHPLSVSHIPFL*PLQAQA Trigger: GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTG...AGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | TATAAGTTGCAGTTGCTCCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTCACATTCCCTTCCTCTaGCCATTACAAGCTCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YKLQLLQAMCFCSAFLPTHIPFL*PLQAQA Trigger: GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTG...AGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR CAA 90 bp | TACCACTTCACTACCATCTTTCCTATCTATGCGACCCCTTATAAGTaGCAGTTGCTCCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YHFTTIFPIYATPYK*QLLQAMCFCSAFLP Trigger: TGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATAAGGGGTCGCATAGATAGGAAAGATGGTAGTGAAGTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SALLSFQLLPIHHPLSVSASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...AGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCAACATTAAGCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTCACAAATAGCACTATaGCTTTCTGCAACAGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPNIKLHIPFLCPLQAQASQIAL*LSATVG Trigger: GCCAACTGTTGCAGAAAGCCATAGTGCTATTTGTGA...GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTAGCACTATGGCTTTCTaGAACAGTTGGCCAAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QDGDALQEITSVLPHSLFSTMAF*NSWPRN Trigger: GTTTCTTGGCCAACTGTTGCAGAAAGCCATAGTGCT...AAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGAGCACTATGGCTTTCTaGAACAGTTGGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PFLCPLQAQAFILPIKMESTMAF*NSWPRN Trigger: GTTTCTTGGCCAACTGTTGCAGAAAGCCATAGTGCT...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACACACATTCCCTTCCTCTaGCCATTACAAGCTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PISFLKEQRDVKQFLCITHIPFL*PLQAQA Trigger: GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTG...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACATTGCTCCAGGCCATGTaGTTCTGCTCTGCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PISFLKEQRDVKQFLCITLLQAM*FCSAFL Trigger: AAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAA...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTTCACAAATAGCACTATaGCTTTCTGCAACAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GDALQEITSVLPHSLFASSQIAL*LSATVG Trigger: GCCAACTGTTGCAGAAAGCCATAGTGCTATTTGTGA...AGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAATTAACATCAGCACTATGGCTTTCTaGAACAGTTGGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SAASFLVCISSQENRINISTMAF*NSWPRN Trigger: GTTTCTTGGCCAACTGTTGCAGAAAGCCATAGTGCT...GATGTTAATTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTAGCACTATGGCTTTCTaGAACAGTTGGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PLPITSSSLYFTNQDGDASTMAF*NSWPRN Trigger: GTTTCTTGGCCAACTGTTGCAGAAAGCCATAGTGCT...AGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGAGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SLPLPITSSSLYFTNQDGASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...TCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGGCGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: ISFLKEQRDVKQFLCITGASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...GCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAATTATCACAAATAGCACTATaGCTTTCTGCAACAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: TSVLPHSLFASPPKKTELSQIAL*LSATVG Trigger: GCCAACTGTTGCAGAAAGCCATAGTGCTATTTGTGA...TAATTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR CAA 90 bp | GATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAGAAAACAGAATTAACATCAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: DGDALQEITSVLPHS*FASPPKKTELTSNH Trigger: GTGATTTGATGTTAATTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PISFLKEQRDVKQFLCITASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACATCACAAATAGCACTATaGCTTTCTGCAACAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PISFLKEQRDVKQFLCITSQIAL*LSATVG Trigger: GCCAACTGTTGCAGAAAGCCATAGTGCTATTTGTGA...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACATATGCAGCTATAGTATaGGCAGCAATGTATTGCATG | + |
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Preference number: 2 (lower is better) Translates to: PISFLKEQRDVKQFLCITYAAIV*AAMYCM Trigger: CATGCAATACATTGCTGCTCATACTATAGCTGCATA...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACAGCACTATGGCTTTCTaGAACAGTTGGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHSTMAF*NSWPRN Trigger: GTTTCTTGGCCAACTGTTGCAGAAAGCCATAGTGCT...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACGCCTCATTCCTTGTTTaGATCTCCTCCCAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHASFLV*ISSQEN Trigger: GTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGC...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCTCACAAATAGCACTATaGCTTTCTGCAACAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: TSSSLYFTNQDGDALQEISQIAL*LSATVG Trigger: GCCAACTGTTGCAGAAAGCCATAGTGCTATTTGTGA...GATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR GCA 72 bp | GCGACCCCTTATAAGTTGCAGTTGCTCCAGGCCATGTaGTTCTGCTCTGCTTTCCTTCCAACTCCTCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: ATPYKLQLLQAM*FCSAFLPTPPH Trigger: ATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATAAGGGGTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PGHVLLLCFPSNSSPFIIVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...GATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| 3UTR GCA 72 bp | CCTTATAAGTTGCAGTTGCTCCAGGCCATGTGCTTCTaGTCTGCTTTCCTTCCAACTCCTCCCCATTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PYKLQLLQAMCF*SAFLPTPPHSS Trigger: TGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR GCA 72 bp | TCTTTCCTATCTATGCGACCCCTTATAAGTTGCAGTTaGTCCAGGCCATGTGCTTCTGCTCTGCTTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFLSMRPLISCS*SRPCASALLSF Trigger: GAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATAAGGGGTCGCATAGATAGGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCGGCTTTCTGCAACAGTaGGCCAAGAAACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSHSSFFSRPTFSSHPGFLQQ*AKKHVK Trigger: TTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCC...GGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCTCTCTCTTGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFLPTPPHSSSSLCVSLSCLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...AGAGAGAGAGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: APHSLPLPITSSSLYFTNVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...ATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCTCCTTCTGGCTTTCTGCAACAGTaGGCCAAGAAACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTLPSSLAQHLVPIPPSGFLQQ*AKKHVK Trigger: TTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCC...AGAAGGAGGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCPLQAQAFILPIKMEMLVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...AAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGTGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PFLCPLQAQAFILPIKMECLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGGCACTGTGCACCTAGATTaGGCAGATCTACCACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ISFLKEQRDVKQFLCITGTVHLD*ADLPLH Trigger: GTGAAGTGGTAGATCTGCCAAATCTAGGTGCACAGT...GCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR GCA 72 bp | CTCTCTCCCAACATTAAGCTCCACATTCCCTTCCTCTaGCCATTACAAGCTCAAGCCTTTATTTTACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LSPNIKLHIPFL*PLQAQAFILPI Trigger: GATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGGGCTTTCTGCAACAGTaGGCCAAGAAACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PFLCPLQAQAFILPIKMEGFLQQ*AKKHVK Trigger: TTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCC...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCAGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAQAFILPIKMEMLYRKSVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...TGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAACTGTGCACCTAGATTaGGCAGATCTACCACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PISFLKEQRDVKQFLCITTVHLD*ADLPLH Trigger: GTGAAGTGGTAGATCTGCCAAATCTAGGTGCACAGT...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR GCA 72 bp | TTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTaGATAACAGGCTCAGCTGGATATGCAGCTATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLKEQRDVKQFL*ITGSAGYAAIV Trigger: TACTATAGCTGCATATCCAGCTGAGCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGAGGCTTTCTGCAACAGTaGGCCAAGAAACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRGFLQQ*AKKHVK Trigger: TTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCC...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YKLKPLFYQSRWRCFTGNVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...ATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAAGTGCTGCCTCATTCCTaGTTTGCATCTCCTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQAQAFILPIKMEMLYRKVLPHS*FASPPK Trigger: CTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCAC...TTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR GCA 72 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATaGTTTACAGGAAATCACCTCAGTGCTGCCTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: KLKPLFYQSRWR*FTGNHLSAASF Trigger: GAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACTGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHCLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCTGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSLYFTNQDGDALQEICLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...GATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCGGCTTTCTGCAACAGTaGGCCAAGAAACATGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSLYFTNQDGDALQEIGFLQQ*AKKHVK Trigger: TTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCC...GATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATTGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YKLKPLFYQSRWRCFTGNCLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...ATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATGCCTCATTCCTTGTTaGCATCTCCTCCCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQAQAFILPIKMEMLYRKCLIPC*HLLPRK Trigger: TTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCA...TTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| 3UTR TCA 72 bp | ATATGCCCCAGCAGTGAAAGCACAACTCAATTAATATaGATACAAACTGTGCACCTAGATTTGGCAGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: ICPSSESTTQLI*IQTVHLDLADL Trigger: TAGATCTGCCAAATCTAGGTGCACAGTTTGTATTCATATTAATTGAGTTGTGCTTTCACTGCTGGGGCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGHVLLLCFPSNSSPFIIPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...GATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAACATTAAGCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPNIKLHIPFLCPLQAQAPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCTCTCTCTCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLPTPPHSSSSLCVSLSPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...AGAGAGAGAGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCTCTCTCTCCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFQLLPIHHPLSVSLSLPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...GAGAGAGAGAGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGHVLLLCFPSNSSPFIICSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...GATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFTGNHLSAASFLVCISSPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...GGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | TCTCCCAACATTAAGCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPNIKLHIPFLCPLQAQASQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSHSSFFSRPTFSSHPCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...GGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGAGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SALLSFQLLPIHHPLSVSCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...AGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAATTACCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPHSLFASPPKKTELPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...TAATTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | GCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APHSLPLPITSSSLYFTNPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...ATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | AAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMEMLYRKSPQCCLIPCLPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...CAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCTCCTTCTTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTLPSSLAQHLVPIPPSYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...AGAAGGAGGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCAACATTAAGCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPNIKLHIPFLCPLQAQAYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...GGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGCTTAATGTTGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | GCTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCTCTCTCTTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLPTPPHSSSSLCVSLSYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...AGAGAGAGAGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | ATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAATCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ITSVLPHSLFASPPKKTESQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...TTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCATGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYRKSPQCCLIPCLHLLPCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...TGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TATAAGTTGCAGTTGCTCCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: YKLQLLQAMCFCSAFLPTYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...AGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CFTGNHLSAASFLVCISSYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...GGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CTTTCCTTCCAACTCCTCCCCATTCATCATCCTCTCTCTGTGTCTCTCTCTCTCCAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LSFQLLPIHHPLSVSLSLQSEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTG...GAGAGAGAGAGACACAGAGAGAGGATGATGAATGGGGAGGAGTTGGAAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: QDGDALQEITSVLPHSLFSQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...AAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | GGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: GDALQEITSVLPHSLFASCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...AGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LCPLQAQAFILPIKMEMLPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...AAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFTGNHLSAASFLVCISSQSEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTG...GGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRSQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLPITSSSLYFTNQDGDASQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...AGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSHSSFFSRPTFSSHPEPLPL*FSQIYF Trigger: AAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...GGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | GCTCCACATTCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: APHSLPLPITSSSLYFTNCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...ATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGAATGTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLCPLQAQAFILPIKMECSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCTCCTTCTGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTLPSSLAQHLVPIPPSEPLPL*FSQIYF Trigger: AAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...AGAAGGAGGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGGCTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISFLKEQRDVKQFLCITGCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...GCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGATATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPITSSSLYFTNQDGYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...TCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLFYQSRWRCFTGNHLSASQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...AGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACATGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PISFLKEQRDVKQFLCITCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAACCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQAQAFILPIKMEMLYRKPTPGT*SKSDKL Trigger: CAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGG...TTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCPLQAQAFILPIKMEMLYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...AAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGACAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRQSEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTG...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | TCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGACAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPITSSSLYFTNQDGQSEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTG...TCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | CAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCATCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QAQAFILPIKMEMLYRKSSQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...TGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSLYFTNQDGDALQEISQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...GATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | GGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDALQEITSVLPHSLFASEPLPL*FSQIYF Trigger: AAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...AGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | ACTATGGCTTTCTGCAACAGTTGGCCAAGAAACATGTTAAATTTATTCCAAGAATCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TMAFCNSWPRNMLNLFQESQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...TTCTTGGAATAAATTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCCATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | TACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATTCTCAGCATGAACTCTaGGCTTCTGATTGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: YKLKPLFYQSRWRCFTGNSQHEL*ASDWGT Trigger: AGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGA...ATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTT | + |
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Preference number: 4 (lower is better) Translates to: QDGDALQEITSVLPHSLFEPLPL*FSQIYF Trigger: AAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...AAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACTGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCATGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: QAQAFILPIKMEMLYRKSCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...TGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | CAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCATATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QAQAFILPIKMEMLYRKSYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...TGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSSLYFTNQDGDALQEIYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...GATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGGCGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISFLKEQRDVKQFLCITGEPLPL*FSQIYF Trigger: AAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...GCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATGCTCAGAGAGCAGGTaGAGCACATGTTTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQAQAFILPIKMEMLYRKCSESR*STCLYF Trigger: GAAGTACAAACATGTGCTCCACCTGCTCTCTGAGCA...TTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CCA 90 bp | TACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATTATACCTCACAAATTTaGGGGCTCTTCCACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKLKPLFYQSRWRCFTGNYTSQI*GLFHGA Trigger: TGCTCCGTGGAAGAGCCCCCAAATTTGTGAGGTATA...ATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR TCA 90 bp | TTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAACAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQAQAFILPIKMEMLYRKQSEKC*LQFQPQ Trigger: TTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTG...TTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS GCA 90 bp | ATAACAGGTCACAAATGTGACCACCAGCATCAGGATGGTGTGGGCTaGTCTAGTCTCAGCATGAACTCTGAGCTTCTGATTGGGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: ITGHKCDHQHQDGVG*SSLSMNSELLIGGL Trigger: CAGTCCCCCAATCAGAAGCTCAGAGTTCATGCTGAGACTAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTGACCTGTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTCCCACTCTTCCTTCTTCTCTCGCCCAACATTTAGTTCCCATCCCACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSHSSFFSRPTFSSHPTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...GGGATGGGAACTAAATGTTGGGCGAGAGAAGAAGGAAGAGTGGGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTCCTCCCCATTCATCATCAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGHVLLLCFPSNSSPFIIREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...GATGATGAATGGGGAGGAGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYRKSPQCCLIPCLHLLPTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...TGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAACAATCAGAAAAATGTaGACTGCAGTTCCAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LYRKSPQCCLIPCLHLLPTIRKM*TAVPTP Trigger: TGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGT...TGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | ATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAAACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSVLPHSLFASPPKKTETAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...TTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | TATAAGTTGCAGTTGCTCCAGGCCATGTGCTTCTGCTCTGCTTTCCTTCCAACTAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YKLQLLQAMCFCSAFLPTREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...AGTTGGAAGGAAAGCAGAGCAGAAGCACATGGCCTGGAGCAACTGCAACTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | GGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTACAATCAGAAAAATGTaGACTGCAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: GDALQEITSVLPHSLFASTIRKM*TAVPTP Trigger: TGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGT...AGATGCAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PFLCPLQAQAFILPIKMETAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | ATCACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAAAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: ITSVLPHSLFASPPKKTEREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...TTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGACAATCAGAAAAATGTaGACTGCAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: PFLCPLQAQAFILPIKMETIRKM*TAVPTP Trigger: TGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGT...CTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGAACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PSSAHYKLKPLFYQSRWRTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...TCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLPITSSSLYFTNQDGDATAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...AGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAGGCACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: ISFLKEQRDVKQFLCITGTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...GCCTGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | ACCTCAGTGCTGCCTCATTCCTTGTTTGCATCTCCTCCCAAGAAAACAGAATTAAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: TSVLPHSLFASPPKKTELREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...TAATTCTGTTTTCTTGGGAGGAGATGCAAACAAGGAATGAGGCAGCACTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | AAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTGCCTCATTCCTTGTTTGAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: KMEMLYRKSPQCCLIPCLREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...CAAACAAGGAATGAGGCAGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTATTTCCTTTCTCAAGGAGCAGAGAGATGTGAAACAGTTTCTCTGCATAACAACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PISFLKEQRDVKQFLCITTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...TGTTATGCAGAGAAACTGTTTCACATCTCTCTGCTCCTTGAGAAAGGAAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | TCCCTTCCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPLPITSSSLYFTNQDGREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...TCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGGAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCCATTACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: PLPITSSSLYFTNQDGDAREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...AGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTAATGGGCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS TCA 90 bp | CAAAGAGGAGAATCAAGGTATTGCCCACAGCTAAGTTGGCTAGAATaGCTTTTATGGGTCTCTGTTGAGATCCATTCAAGATTGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: QRGESRYCPQLSWLE*LLWVSVEIHSRLEI Trigger: TATCTCCAATCTTGAATGGATCTCAACAGAGACCCATAAAAGTCATTCTAGCCAACTTAGCTGTGGGCAATACCTTGATTCTCCTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLFYQSRWRCFTGNHLSATAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...AGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | CCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACCTCAGTGCTACAATCAGAAAAATGTaGACTGCAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: PLFYQSRWRCFTGNHLSATIRKM*TAVPTP Trigger: TGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGT...AGCACTGAGGTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS TCA 90 bp | ATCCATTCAAGATTGGAGATAAATTATGAACAATCAGAAAAATGTTaGCTGCAGTTCCAACCCCAACCTGGCAAAGCAAGAGGATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: IHSRLEINYEQSEKC*LQFQPQPGKARGSE Trigger: TTCAGATCCTCTTGCTTTGCCAGGTTGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGTTCATAATTTATCTCCAATCTTGAATGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACACAATCAGAAAAATGTaGACTGCAGTTCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHTIRKM*TAVPTP Trigger: TGGGGTTGGAACTGCAGTCAACATTTTTCTGATTGT...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | TACAAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: YKLKPLFYQSRWRCFTGNTAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...ATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | ACTATGGCTTTCTGCAACAGTTGGCCAAGAAACATGTTAAATTTATTCCAAGAAACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: TMAFCNSWPRNMLNLFQETAKIS*TRLNQS Trigger: GCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGT...TTCTTGGAATAAATTTAACATGTTTCTTGGCCAACTGTTGCAGAAAGCCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS-3UTR CAA 90 bp | AAGCTCAAGCCTTTATTTTACCAATCAAGATGGAGATGCTTTACAGGAAATCACAGAGAACAAGGATCATaGGGATCCCTAAAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLKPLFYQSRWRCFTGNHREQGS*GSLKIK Trigger: CTTGATCTTTAGGGATCCCAATGATCCTTGTTCTCT...GTGATTTCCTGTAAAGCATCTCCATCTTGATTGGTAAAATAAAGGCTTGAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS TCA 72 bp | GGAGCATCACCCTACCCCAGGTACCTGGAGCAAGAGTaGCAAGCTGATAAGTGCTCAGAGAGCAGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GASPYPRYLEQE*QADKCSESRWS Trigger: GCTCCACCTGCTCTCTGAGCACTTATCAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGGGTGATGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS CCA 72 bp | GGCTCTTCCACGGAGCATCACCCTACCCCAGGTACCTaGAGCAAGAGTGACAAGCTGATAAGTGCTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSTEHHPTPGT*SKSDKLISAQR Trigger: TCTCTGAGCACTTATCAGCTTGTCACTCTTGCTCCAGGTACCTGGGGTAGGGTGATGCTCCGTGGAAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS CAA 72 bp | GAGCTTCTGATTGGGGGACTGAATATGCTGCAATCTTaGGTGGTGTCTGTTCAGGAGAATAACCATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ELLIGGLNMLQS*VVSVQENNHGD Trigger: GTCTCCATGGTTATTCTCCTGAACAGACACCACCAAAGATTGCAGCATATTCAGTCCCCCAATCAGAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS CAA 72 bp | GGAGAAAAGGTAGGGAAGCTTACAGCCAAAATTTCTTaGACACGCCTTAACCAGAGCCGAGAGTCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GEKVGKLTAKIS*TRLNQSRESTK Trigger: CTTTGTGGACTCTCGGCTCTGGTTAAGGCGTGTCAAAGAAATTTTGGCTGTAAGCTTCCCTACCTTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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| CDS CCA 72 bp | GGCAAAGCAAGAGGATCTGAAGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTTTGAGACAACATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GKARGSEEPLPL*FSQIYFETTWR Trigger: TCTCCATGTTGTCTCAAAATAAATCTGTGAAAACCACAGAGGAAGTGGCTCTTCAGATCCTCTTGCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078458.4 |
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| CDS CAA 90 bp | AAAAGTGTCATATTGTTTGGAAATGCAAAGAGGAGAATCAAGGTATaGCCCACAGCTAAGTTGGCTAGAATGACTTTTATGGGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KSVILFGNAKRRIKV*PTAKLARMTFMGLC Trigger: ACAGAGACCCATAAAAGTCATTCTAGCCAACTTAGCTGTGGGCAATACCTTGATTCTCCTCTTTGCATTTCCAAACAATATGACACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENSMUST00000078458.4 ENSMUST00000226128.2 ENSMUST00000226321.2 ENSMUST00000226733.2 ENSMUST00000226771.2 ENSMUST00000227386.2 ENSMUST00000227774.2 ENSMUST00000227866.2 ENSMUST00000228228.2 ENSMUST00000228484.2 ENSMUST00000228559.2 ENSMUST00000228674.2 ENSMUST00000228681.2 |
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