Pregenerated sensors for VMN1R169 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094602Ensembl transcript IDs: ENSMUST00000170290.2, ENSMUST00000226669.2, ENSMUST00000227547.2, ENSMUST00000227932.2, ENSMUST00000228832.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTaGACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLLLSPNIQLHISFP*TSLAQAFILPIKMG Trigger: TCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR TCA 90 bp | TTCCTTTATCATTTCTTATTTCCTTTCTCAAGGAGCACAGAGTTGTaGAACAGTTCTTTGCATCACATACTCAAATTGGTATGCAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: FLYHFLFPFSRSTEL*NSSLHHILKLVCSY Trigger: ATAGCTGCATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTTGAGAAAGGAAATAAGAAATGATAAAGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAACTTGTGCTTCTGCTCTaGTTTCCAGCCACCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: MLVGCFGNSPTQICPGNELVLLL*FPATIS Trigger: GGAAATGGTGGCTGGAAAGCAGAGCAGAAGCACAAG...TTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGCTTGTGCTTCTGCTCTaGTTTCCAGCCACCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWLVLLL*FPATIS Trigger: GGAAATGGTGGCTGGAAAGCAGAGCAGAAGCACAAG...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAATTTCTCAAGGCCTTGTaGTTCTGCTCTGCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WAVLVILQPKYAPAMKAQFLKAL*FCSAFQ Trigger: CTGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAA...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGTTTCTCAAGGCCTTGTaGTTCTGCTCTGCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWFLKAL*FCSAFQ Trigger: CTGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAA...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAACTCCCTTATAACTTGTaGTTTCTCAAGGCCTTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: MLVGCFGNSPTQICPGNELPYNL*FLKALC Trigger: GCACAAGGCCTTGAGAAACCACAAGTTATAAGGGAG...TTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAAACCATCCTCTCCATTTaGGACTCCCTTATAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: WAVLVILQPKYAPAMKAQTILSI*DSLITC Trigger: ACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGT...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAACCATCCTCTCCATTTaGGACTCCCTTATAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: MLVGCFGNSPTQICPGNETILSI*DSLITC Trigger: ACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGT...TTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGCTTGTGCTTCTGCTCTaGTTTCCAGCCACCATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KEHRVVKQFFASHTQIGMLVLLL*FPATIS Trigger: GGAAATGGTGGCTGGAAAGCAGAGCAGAAGCACAAG...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGCTCCCTTATAACTTGTaGTTTCTCAAGGCCTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: KEHRVVKQFFASHTQIGMLPYNL*FLKALC Trigger: GCACAAGGCCTTGAGAAACCACAAGTTATAAGGGAG...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR CAA 90 bp | CACATACTCAAATTGGTATGCAGCTATAGTATGAGCAGCAACATATaGCATGGCAATCTAACCACCTCAAACTCCATAGTGCTCATATTA | + |
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Preference number: 2 (lower is better) Translates to: HILKLVCSYSMSSNI*HGNLTTSNSIVLIL Trigger: TAATATGAGCACTATGGAGTTTGAGGTGGTTAGATTGCCATGCAATATGTTGCTGCTCATACTATAGCTGCATACCAATTTGAGTATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGTTTTACCAATCAAGATaGGACTGTGGTTTACATGAA | + |
|
Preference number: 2 (lower is better) Translates to: KEHRVVKQFFASHTQIGMFYQSR*DCGLHE Trigger: TTCATGTAAACCACAGTCCCATCTTGATTGGTAAAA...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CCA 90 bp | CACAACTCAATTAATATGAATACAAGCTGTGTACCTAGATTAGCCAGATCTACCTTTTACCAATCAAGATaGGACTGTGGTTTACATGAA | + |
|
Preference number: 2 (lower is better) Translates to: HNSINMNTSCVPRLARSTFYQSR*DCGLHE Trigger: TTCATGTAAACCACAGTCCCATCTTGATTGGTAAAA...GGTAGATCTGGCTAATCTAGGTACACAGCTTGTATTCATATTAATTGAGTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAAAGACTCCCTTATAACTaGTGGTTTCTCAAGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: WAVLVILQPKYAPAMKAQRLPYN*WFLKAL Trigger: CAAGGCCTTGAGAAACCACAAGTTATAAGGGAGTCT...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR TCA 72 bp | AGCCAGATCTACCACTACAGTACCATCCTCTCCATTTaGGACTCCCTTATAACTTGTGGTTTCTCAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQIYHYSTILSI*DSLITCGFSRP Trigger: AGGCCTTGAGAAACCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATCTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAATACCATCCTCTCCATTaGAGACTCCCTTATAACTTG | + |
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Preference number: 3 (lower is better) Translates to: WAVLVILQPKYAPAMKAQYHPLH*RLPYNL Trigger: CAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTA...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR GCA 72 bp | CTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTaGACATCACTAGCTCAAGCCTTTATTTTACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LSPNIQLHISFP*TSLAQAFILPI Trigger: GATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR TCA 72 bp | CATTTCTTATTTCCTTTCTCAAGGAGCACAGAGTTGTaGAACAGTTCTTTGCATCACATACTCAAATTGGTA | + |
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Preference number: 3 (lower is better) Translates to: HFLFPFSRSTEL*NSSLHHILKLV Trigger: TACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTTGAGAAAGGAAATAAGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACACAAAGCAAGAGGATCTaGAGAGCCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: PLLLLSPNIQLHISFPCTQSKRI*RATSTV Trigger: CACAGTGGAAGTGGCTCTTCAGATCCTCTTGCTTTG...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR CCA 90 bp | ATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAATTGGGGGCTCTTCCATaGAGCATCACCCTACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MLVGCFGNSPTQICPGNELGALP*SITLPQ Trigger: CTGGGGTAGGGTGATGCTCCATGGAAGAGCCCCCAA...TTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAATTGGGGGCTCTTCCATaGAGCATCACCCTACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WAVLVILQPKYAPAMKAQLGALP*SITLPQ Trigger: CTGGGGTAGGGTGATGCTCCATGGAAGAGCCCCCAA...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACATATACCTCACAAATTTaGGGGCTCTTCCATGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLLLLSPNIQLHISFPCTYTSQI*GLFHGA Trigger: TGCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATA...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAACAGCCAAAATTTCTTTaGCCCGTCTCAACCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: WAVLVILQPKYAPAMKAQQPKFL*PVSTRP Trigger: GGGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTG...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGCAAAGCAAGAGGATCTaGAGAGCCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWQSKRI*RATSTV Trigger: CACAGTGGAAGTGGCTCTTCAGATCCTCTTGCTTTG...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGCAGCCAAAATTTCTTTaGCCCGTCTCAACCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWQPKFL*PVSTRP Trigger: GGGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTG...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACAGAGCCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: PLLLLSPNIQLHISFPCTEPLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGGCTC...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR CAA 72 bp | TTGAGACTCCCTTATAACTTGTGGTTTCTCAAGGCCTaGTGCTTCTGCTCTGCTTTCCAGCCACCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRLPYNLWFLKA*CFCSAFQPPFP Trigger: AGGAAATGGTGGCTGGAAAGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAGTTATAAGGGAGTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| 3UTR CAA 72 bp | CAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTaGTGGTTTCTCAAGGCCTTGTGCTTCTGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QYHPLHLRLPYN*WFLKALCFCSA Trigger: AGCAGAGCAGAAGCACAAGGCCTTGAGAAACCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTACAAAGCAAGAGGATCTaGAGAGCCACTTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: VLSPSPICNIKLQIALGLQSKRI*RATSTV Trigger: CACAGTGGAAGTGGCTCTTCAGATCCTCTTGCTTTG...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTACAGCCAAAATTTCTTTaGCCCGTCTCAACCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: VLSPSPICNIKLQIALGLQPKFL*PVSTRP Trigger: GGGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTG...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACAGAAGAGAAGTACAAATaGAGTCTAGAAGATAACAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLLLSPNIQLHISFPCTEEKYK*SLEDNR Trigger: CCTGTTATCTTCTAGACTGCATTTGTACTTCTCTTC...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | ATGCTAGTGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAATCTCAGCATGAAATCTaGGCTTCTGATTTGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: MLVGCFGNSPTQICPGNESQHEI*ASDLGI Trigger: AATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGA...TTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCACTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTAAACAGGTCACAAATGTaGCTACCAGCATCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VLSPSPICNIKLQIALGLNRSQM*LPASGW Trigger: CCATCCTGATGCTGGTAGTCACATTTGTGACCTGTT...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACCAGCCAAAATTTCTTTaGCCCGTCTCAACCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: HITSSSLYFTNQDGTVVYQPKFL*PVSTRP Trigger: GGGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTG...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | TACCTGAGTTCTGATTCATTCTTTGTTCTTAGCCCCTCCCCTATTTGTAACATCTACCAGGAGCAAGAGTaGCAAGCTGATAAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YLSSDSFFVLSPSPICNIYQEQE*QADKCS Trigger: TGAGCACTTATCAGCTTGTCACTCTTGCTCCTGGTA...GATGTTACAAATAGGGGAGGGGCTAAGAACAAAGAATGAATCAGAACTCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACTACCAGGAGCAAGAGTaGCAAGCTGATAAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HITSSSLYFTNQDGTVVYYQEQE*QADKCS Trigger: TGAGCACTTATCAGCTTGTCACTCTTGCTCCTGGTA...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCCATATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCATCTCAGCATGAAATCTaGGCTTCTGATTTGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: QLHISFPCTSLAQAFILPSQHEI*ASDLGI Trigger: AATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGA...TGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAATATGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTATCCTCAACAGTGGGTAACAGGTCACAAATGTaGCTACCAGCATCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PICNIKLQIALGLSSTVGNRSQM*LPASGW Trigger: CCATCCTGATGCTGGTAGTCACATTTGTGACCTGTT...ACCCACTGTTGAGGATAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS-3UTR TCA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACAACAGGTCACAAATGTaGCTACCAGCATCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HITSSSLYFTNQDGTVVYNRSQM*LPASGW Trigger: CCATCCTGATGCTGGTAGTCACATTTGTGACCTGTT...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAAGAGCCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAVLVILQPKYAPAMKAQEPLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGGCTC...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTATCTCAGCATGAAATCTaGGCTTCTGATTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLSPSPICNIKLQIALGLSQHEI*ASDLGI Trigger: AATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGA...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGTATACCTCACAAATTTaGGGGCTCTTCCATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTSLAQAFILPIKMYTSQI*GLFHGA Trigger: TGCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATA...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | TACCTGAGTTCTGATTCATTCTTTGTTCTTAGCCCCTCCCCTATTTGTAACATCTATACCTCACAAATTTaGGGGCTCTTCCATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLSSDSFFVLSPSPICNIYTSQI*GLFHGA Trigger: TGCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATA...GATGTTACAAATAGGGGAGGGGCTAAGAACAAAGAATGAATCAGAACTCAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR TCA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACTCTCAGCATGAAATCTaGGCTTCTGATTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HITSSSLYFTNQDGTVVYSQHEI*ASDLGI Trigger: AATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGA...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTAGAAGAGAAGTACAAATaGAGTCTAGAAGATAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSPSPICNIKLQIALGLEEKYK*SLEDNR Trigger: CCTGTTATCTTCTAGACTGCATTTGTACTTCTCTTC...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | CACAACTCAATTAATATGAATACAAGCTGTGTACCTAGATTAGCCAGATCTACCTATACCTCACAAATTTaGGGGCTCTTCCATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HNSINMNTSCVPRLARSTYTSQI*GLFHGA Trigger: TGCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATA...GGTAGATCTGGCTAATCTAGGTACACAGCTTGTATTCATATTAATTGAGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGTCTGAGCTTCTGATTTaGGGATTGAATATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFPCTSLAQAFILPIKMSELLI*GLNMLQ Trigger: TTGCAGCATATTCAATCCCCAAATCAGAAGCTCAGA...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| 3UTR CAA 72 bp | AAATTGGTATGCAGCTATAGTATGAGCAGCAACATATaGCATGGCAATCTAACCACCTCAAACTCCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLVCSYSMSSNI*HGNLTTSNSIV Trigger: CACTATGGAGTTTGAGGTGGTTAGATTGCCATGCAATATGTTGCTGCTCATACTATAGCTGCATACCAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR GCA 90 bp | CCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTATCCTCAACAGTGGGTGAAGAGAAGTACAAATaGAGTCTAGAAGATAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PICNIKLQIALGLSSTVGEEKYK*SLEDNR Trigger: CCTGTTATCTTCTAGACTGCATTTGTACTTCTCTTC...ACCCACTGTTGAGGATAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGGAGCCACTTCCACTGTaGTTTTCACAGATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEHRVVKQFFASHTQIGMEPLPL*FSQIYS Trigger: AGAATAAATCTGTGAAAACCACAGTGGAAGTGGCTC...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGTCTGAGCTTCTGATTTaGGGATTGAATATGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEHRVVKQFFASHTQIGMSELLI*GLNMLQ Trigger: TTGCAGCATATTCAATCCCCAAATCAGAAGCTCAGA...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR GCA 90 bp | CACAACTCAATTAATATGAATACAAGCTGTGTACCTAGATTAGCCAGATCTACCGAAGAGAAGTACAAATaGAGTCTAGAAGATAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNSINMNTSCVPRLARSTEEKYK*SLEDNR Trigger: CCTGTTATCTTCTAGACTGCATTTGTACTTCTCTTC...GGTAGATCTGGCTAATCTAGGTACACAGCTTGTATTCATATTAATTGAGTTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACAACAGCCAAAATTTCTTaGACCCGTCTCAACCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLLLLSPNIQLHISFPCTTAKIS*TRLNQT Trigger: GGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTGT...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACAAATATGCTGCAATCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLLSPNIQLHISFPCTNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGATTGCAGCATATT...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTCTTCTCTCTCCCAACATTCAGCTCCATATTTCCTTCCCCTGCACAGTGGAGCAAACCCACTaGCTTTTAGTATTGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLLLSPNIQLHISFPCTVEQTH*LLVLVS Trigger: TGATACCAATACTAAAAGCAAGTGGGTTTGCTCCAC...TGTGCAGGGGAAGGAAATATGGAGCTGAATGTTGGGAGAGAGAAGAAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGGTATACCTCACAAATTaGGGGGCTCTTCCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWVYLTN*GALPWS Trigger: GCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATAC...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGTATACCTCACAAATTaGGGGGCTCTTCCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFPCTSLAQAFILPIKMVYLTN*GALPWS Trigger: GCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATAC...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACGTATACCTCACAAATTaGGGGGCTCTTCCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HITSSSLYFTNQDGTVVYVYLTN*GALPWS Trigger: GCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATAC...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTAGCCCCTCCCCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTAACAGCCAAAATTTCTTaGACCCGTCTCAACCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLSPSPICNIKLQIALGLTAKIS*TRLNQT Trigger: GGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTGT...TAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGGGGAGGGGCTAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGTTTTGGTAATTCTCCAACCCAAATATGCCCCGGCAATGAAAGCACAACTTCTGATTTGGGGATaGAATATGCTGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WAVLVILQPKYAPAMKAQLLIWG*NMLQSL Trigger: CAAAGATTGCAGCATATTCAATCCCCAAATCAGAAG...TTGTGCTTTCATTGCCGGGGCATATTTGGGTTGGAGAATTACCAAAACAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGACAGCCAAAATTTCTTaGACCCGTCTCAACCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: ISFPCTSLAQAFILPIKMTAKIS*TRLNQT Trigger: GGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTGT...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGGGACTGTGGTTTACAATATGCTGCAATCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HITSSSLYFTNQDGTVVYNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGATTGCAGCATATT...GTAAACCACAGTCCCATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGAATATGCTGCAATCTTaGGTGGTGTCTGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISFPCTSLAQAFILPIKMNMLQS*VVSVQE Trigger: CTCCTGAACAGACACCACCAAAGATTGCAGCATATT...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | GATCTACCACTACAGTACCATCCTCTCCATTTGAGACTCCCTTATAACTTGTGGCTTCTGATTTGGGGATaGAATATGCTGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLPLQYHPLHLRLPYNLWLLIWG*NMLQSL Trigger: CAAAGATTGCAGCATATTCAATCCCCAAATCAGAAG...CCACAAGTTATAAGGGAGTCTCAAATGGAGAGGATGGTACTGTAGTGGTAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CCTATTTGTAACATCAAGTTACAAATAGCACTAGGGCTATCCTCAACAGTGGGTGTGGAGCAAACCCACTaGCTTTTAGTATTGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PICNIKLQIALGLSSTVGVEQTH*LLVLVS Trigger: TGATACCAATACTAAAAGCAAGTGGGTTTGCTCCAC...ACCCACTGTTGAGGATAGCCCTAGTGCTATTTGTAACTTGATGTTACAAATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | CACAACTCAATTAATATGAATACAAGCTGTGTACCTAGATTAGCCAGATCTACCACAGCCAAAATTTCTTaGACCCGTCTCAACCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: HNSINMNTSCVPRLARSTTAKIS*TRLNQT Trigger: GGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTGT...GGTAGATCTGGCTAATCTAGGTACACAGCTTGTATTCATATTAATTGAGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCCCCTGCACATCACTAGCTCAAGCCTTTATTTTACCAATCAAGATGCTTCTGATTTGGGGATaGAATATGCTGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISFPCTSLAQAFILPIKMLLIWG*NMLQSL Trigger: CAAAGATTGCAGCATATTCAATCCCCAAATCAGAAG...CATCTTGATTGGTAAAATAAAGGCTTGAGCTAGTGATGTGCAGGGGAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS TCA 90 bp | ATCCATTCAAGAATGGAGATAAATTATGGACAAACAGAAAAATGTTaGCTACAGTTCCAACCCCAACCTGGCAAAGCAAGAGGATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHSRMEINYGQTEKC*LQFQPQPGKARGSE Trigger: TTCAGATCCTCTTGCTTTGCCAGGTTGGGGTTGGAACTGTAGTCAACATTTTTCTGTTTGTCCATAATTTATCTCCATTCTTGAATGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGCACAGAGTTGTGAAACAGTTCTTTGCATCACATACTCAAATTGGTATGCTTCTGATTTGGGGATaGAATATGCTGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEHRVVKQFFASHTQIGMLLIWG*NMLQSL Trigger: CAAAGATTGCAGCATATTCAATCCCCAAATCAGAAG...CATACCAATTTGAGTATGTGATGCAAAGAACTGTTTCACAACTCTGTGCTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS TCA 72 bp | GGAGCATCACCCTACCCCAGGTACCAGGAGCAAGAGTaGCAAGCTGATAAGTGCTCAGAGAGCAGGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GASPYPRYQEQE*QADKCSESRWS Trigger: GCTCCACCTGCTCTCTGAGCACTTATCAGCTTGTCACTCTTGCTCCTGGTACCTGGGGTAGGGTGATGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS GCA 72 bp | CACAAATGTGACTACCAGCATCAGGATGGTGTGGGCTaGTCTAGTCTCAGCATGAAATCTGAGCTTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: HKCDYQHQDGVG*SSLSMKSELLI Trigger: AATCAGAAGCTCAGATTTCATGCTGAGACTAGAGCAGCCCACACCATCCTGATGCTGGTAGTCACATTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CCA 72 bp | ACAACCAACAACTATAACAAGTATACCTCACAAATTTaGGGGCTCTTCCATGGAGCATCACCCTACCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTNNYNKYTSQI*GLFHGASPYPR Trigger: CCTGGGGTAGGGTGATGCTCCATGGAAGAGCCCCCAAATTTGTGAGGTATACTTGTTATAGTTGTTGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CAA 90 bp | GGCTGCTCTAGTCTCAGCATGAAATCTGAGCTTCTGATTTGGGGATaGAATATGCTGCAATCTTTGGTGGTGTCTGTTCAGGAGAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSLSMKSELLIWG*NMLQSLVVSVQENH Trigger: GTGATTCTCCTGAACAGACACCACCAAAGATTGCAGCATATTCAATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGACTAGAGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CAA 72 bp | GAGCTTCTGATTTGGGGATTGAATATGCTGCAATCTTaGGTGGTGTCTGTTCAGGAGAATCACCATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ELLIWGLNMLQS*VVSVQENHHGD Trigger: GTCTCCATGGTGATTCTCCTGAACAGACACCACCAAAGATTGCAGCATATTCAATCCCCAAATCAGAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CAA 72 bp | GGAGAAAAGGTAGGAAAGCTTACAGCCAAAATTTCTTaGACCCGTCTCAACCAGACCCGAGAGTCCACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GEKVGKLTAKIS*TRLNQTRESTK Trigger: TTTTGTGGACTCTCGGGTCTGGTTGAGACGGGTCAAAGAAATTTTGGCTGTAAGCTTTCCTACCTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CCA 72 bp | TGCTCTAGTCTCAGCATGAAATCTGAGCTTCTGATTTaGGGATTGAATATGCTGCAATCTTTGGTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSLSMKSELLI*GLNMLQSLVVS Trigger: AGACACCACCAAAGATTGCAGCATATTCAATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGACTAGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
||
| CDS CAA 72 bp | AGTCTCAGCATGAAATCTGAGCTTCTGATTTGGGGATaGAATATGCTGCAATCTTTGGTGGTGTCTGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSMKSELLIWG*NMLQSLVVSVQ Trigger: CTGAACAGACACCACCAAAGATTGCAGCATATTCAATCCCCAAATCAGAAGCTCAGATTTCATGCTGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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| CDS CAA 72 bp | ATGCCTATACTGAAACCAGTAGTGGAGCAAACCCACTaGCTTTTAGTATTGGTATCATTATGTGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MPILKPVVEQTH*LLVLVSLCVFW Trigger: CCAGAAAACACATAATGATACCAATACTAAAAGCAAGTGGGTTTGCTCCACTACTGGTTTCAGTATAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000170290.2 ENSMUST00000226669.2 ENSMUST00000227547.2 ENSMUST00000227932.2 ENSMUST00000228832.2 |
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