Pregenerated sensors for VMN1R168 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074291Ensembl transcript IDs: ENSMUST00000098704.3, ENSMUST00000235361.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAACCACCCACTTCCACTTCCTGGCCCTGGCATTCCCCTACATTaGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: PNHPLPLPGPGIPLH*EIEPSQDQGPLLLL Trigger: CAACAGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGTGGGTGGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | TTCAGCTCCTTAGCTCTTTCATTGGGGACCCTGTGCTCTGTCCAATaGGTGGCTGTGAGCATCCACTTCTATATTAGTCAGGAACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: FSSLALSLGTLCSVQ*VAVSIHFYISQELA Trigger: TGCCAGTTCCTGACTAATATAGAAGTGGATGCTCACAGCCACCCATTGGACAGAGCACAGGGTCCCCAATGAAAGAGCTAAGGAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR GCA 90 bp | GCTGCAAACTTCTTCAGCTCCTTAGCTCTTTCATTGGGGACCCTGTaGTCTGTCCAATGGGTGGCTGTGAGCATCCACTTCTATATTAGT | + |
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Preference number: 1 (lower is better) Translates to: AANFFSSLALSLGTL*SVQWVAVSIHFYIS Trigger: ACTAATATAGAAGTGGATGCTCACAGCCACCCATTGGACAGAGCACAGGGTCCCCAATGAAAGAGCTAAGGAGCTGAAGAAGTTTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | TTGGCTGGTATAAGAGAAGAGGTCAAGGACAAGGGCTCTGTGTCATaGGTTGGACAGAAACTCCCTCTTTACTCAGTGCTACGATTGATT | + |
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Preference number: 1 (lower is better) Translates to: LAGIREEVKDKGSVS*VGQKLPLYSVLRLI Trigger: AATCAATCGTAGCACTGAGTAAAGAGGGAGTTTCTGTCCAACCCATGACACAGAGCCCTTGTCCTTGACCTCTTCTCTTATACCAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | TGTCATGGGTTGGACAGAAACTCCCTCTTTACTCAGTGCTACGATTaGTTACATAGCAACTGCACTACCTCAGGTCATGTAGTGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: CHGLDRNSLFTQCYD*LHSNCTTSGHVVLE Trigger: TTCCAGCACTACATGACCTGAGGTAGTGCAGTTGCTATGTAATCAATCGTAGCACTGAGTAAAGAGGGAGTTTCTGTCCAACCCATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | GTCAGCAAGCACTTCTTGGTATTCCACAATAATGTCTGGGTTTGGTaGTTGTTTTTGGGATGGATCCCAAAGTGGAGCAATCTCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: VSKHFLVFHNNVWVW*LFLGWIPKWSNLWV Trigger: CACCCAGAGATTGCTCCACTTTGGGATCCATCCCAAAAACAATCACCAAACCCAGACATTATTGTGGAATACCAAGAAGTGCTTGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR GCA 90 bp | GGATTCCTAACTAGGGACACCCTCACAAATTCAGAAAGTTTCCACTaGACTACATTTCCACCCCACACTTCAAATGTCCCCAAATTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GFLTRDTLTNSESFH*TTFPPHTSNVPKFL Trigger: CAGGAATTTGGGGACATTTGAAGTGTGGGGTGGAAATGTAGTGCAGTGGAAACTTTCTGAATTTGTGAGGGTGTCCCTAGTTAGGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | ACTTCTTGGTATTCCACAATAATGTCTGGGTTTGGTGATTGTTTTTaGGATGGATCCCAAAGTGGAGCAATCTCTGGGTGGTCGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TSWYSTIMSGFGDCF*DGSQSGAISGWSFP Trigger: AGGGAACGACCACCCAGAGATTGCTCCACTTTGGGATCCATCCCAAAAACAATCACCAAACCCAGACATTATTGTGGAATACCAAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | TTGTCACTCAGGCCACTATGTGACTTCATACTTAGTTTACTCAAGTaGACAATCTTACCTTTTAGGCCCTTAAGGCCTGCACCCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LSLRPLCDFILSLLK*TILPFRPLRPAPLK Trigger: CTTGAGGGGTGCAGGCCTTAAGGGCCTAAAAGGTAAGATTGTCCACTTGAGTAAACTAAGTATGAAGTCACATAGTGGCCTGAGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | TTCATATCAAGGCTAGATAAGGTAATCTCGTTCTTCATGGTTCTCTaGTCATCACCTAATGCTGTGTGTGTGTCTGTGCTTCTGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: FISRLDKVISFFMVL*SSPNAVCVSVLLHP Trigger: TGGATGCAGAAGCACAGACACACACACAGCATTAGGTGATGATCAGAGAACCATGAAGAACGAGATTACCTTATCTAGCCTTGATATGAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | CATTATTATACTCTGTTATGCTTGCAGACAGGAGTCTATCCTAGCTaGCTTCTGAGAATCTCCACCCAGCAGCTGACTTACACAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: HYYTLLCLQTGVYPS*LLRISTQQLTYTDK Trigger: TTTATCTGTGTAAGTCAGCTGCTGGGTGGAGATTCTCAGAAGTCAGCTAGGATAGACTCCTGTCTGCAAGCATAACAGAGTATAATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | ATAAAAACTGTATTACATTGGTACAGTGACAGGCAGGTAGATCAATaGAATAGAGCTGAAGACCCAGAAATGAACCAACACACCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: IKTVLHWYSDRQVDQ*NRAEDPEMNQHTCG Trigger: ACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAGCTCTATTCCATTGATCTACCTGCCTGTCACTGTACCAATGTAATACAGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | TGCAACCCAACCTACAGAGCATTTGTGATAAAAACTGTATTACATTaGTACAGTGACAGGCAGGTAGATCAATGGAATAGAGCTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: CNPTYRAFVIKTVLH*YSDRQVDQWNRAED Trigger: GTCTTCAGCTCTATTCCATTGATCTACCTGCCTGTCACTGTACCAATGTAATACAGTTTTTATCACAAATGCTCTGTAGGTTGGGTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | ATGGAGTTGGAAATTGGATTATTTAGGATGAGAGATGGGGAGTTATaGAGTTATAGGAGCGATGGCTATATGGCCATGAGAAACAATGTG | + |
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Preference number: 1 (lower is better) Translates to: MELEIGLFRMRDGEL*SYRSDGYMAMRNNV Trigger: CACATTGTTTCTCATGGCCATATAGCCATCGCTCCTATAACTCCATAACTCCCCATCTCTCATCCTAAATAATCCAATTTCCAACTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | ATGCAAATCAAAACAATCCTGAGATTCCACCTAGACCATTCAGAATaGCTAAGATCAAAAACTAAGGTGACAGCAGATGCTGTCAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: MQIKTILRFHLDHSE*LRSKTKVTADAVKV Trigger: AACCTTGACAGCATCTGCTGTCACCTTAGTTTTTGATCTTAGCCATTCTGAATGGTCTAGGTGGAATCTCAGGATTGTTTTGATTTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | AAACATTCAGCCTATAATTTATCCTGTTTACAAGAAATCCTGGGATaGAGATGGAGCAGAGATTCAGGGAATGGCCAAACTAAAACTAGC | + |
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Preference number: 1 (lower is better) Translates to: KHSAYNLSCLQEILG*RWSRDSGNGQTKTS Trigger: GCTAGTTTTAGTTTGGCCATTCCCTGAATCTCTGCTCCATCTCCATCCCAGGATTTCTTGTAAACAGGATAAATTATAGGCTGAATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | TCCACAAACATTCAGCCTATAATTTATCCTGTTTACAAGAAATCCTaGGATGGAGATGGAGCAGAGATTCAGGGAATGGCCAAACTAAAA | + |
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Preference number: 1 (lower is better) Translates to: STNIQPIIYPVYKKS*DGDGAEIQGMAKLK Trigger: TTTTAGTTTGGCCATTCCCTGAATCTCTGCTCCATCTCCATCCCAGGATTTCTTGTAAACAGGATAAATTATAGGCTGAATGTTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | GTATTTGCTTCATATATCAAAAGTGAGACATTGACGTTACAATTGTaGATATTCTTTGGCTGGTATAAGAGAAGAGGTCAAGGACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: VFASYIKSETLTLQL*IFFGWYKRRGQGQG Trigger: CCCTTGTCCTTGACCTCTTCTCTTATACCAGCCAAAGAATATTCACAATTGTAACGTCAATGTCTCACTTTTGATATATGAAGCAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR TCA 90 bp | TTATCTACAGTTTGGTCTTCCTTCATCTTGAGTTCATGTGGTTTGTaGATTGTATCTTGGATATTCCAAGCTTCTAGGCTAATATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LSTVWSSFILSSCGL*IVSWIFQASRLICS Trigger: AGAGCATATTAGCCTAGAAGCTTGGAATATCCAAGATACAATTCACAAACCACATGAACTCAAGATGAAGGAAGACCAAACTGTAGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR GCA 90 bp | ATACGTACACGGGAAATTTTCCTGAGCAGAAATACCAATATCTTATaGTCTAAGATGAATAATTGGCAAAAGGGACCTCATAATATTGCA | + |
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Preference number: 1 (lower is better) Translates to: IRTREIFLSRNTNIL*SKMNNWQKGPHNIA Trigger: TGCAATATTATGAGGTCCCTTTTGCCAATTATTCATCTTAGAGCATAAGATATTGGTATTTCTGCTCAGGAAAATTTCCCGTGTACGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CCA 90 bp | AGCATTGTGAATAGGTACATTAAAAAGGATATATTCTCCGTAAGATaGTGCTTGACGAAGGTATATTTCTTAATCGAAGGTCTTCATACC | + |
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Preference number: 1 (lower is better) Translates to: SIVNRYIKKDIFSVR*CLTKVYFLIEGLHT Trigger: GGTATGAAGACCTTCGATTAAGAAATATACCTTCGTCAAGCACCATCTTACGGAGAATATATCCTTTTTAATGTACCTATTCACAATGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 90 bp | ACCAAACCACCCACTTCCACTTCCTGGCCCTGGCATTCCCCTACATaGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: TKPPTSTSWPWHSPT*GNRAFTGPRASPPV Trigger: AACAGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGTGGGTGGTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 90 bp | TCCTCCTATTGGGCTGCAAACTTCTTCAGCTCCTTAGCTCTTTCATaGGGGACCCTGTGCTCTGTCCAATGGGTGGCTGTGAGCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSYWAANFFSSLALS*GTLCSVQWVAVSIH Trigger: GTGGATGCTCACAGCCACCCATTGGACAGAGCACAGGGTCCCCAATGAAAGAGCTAAGGAGCTGAAGAAGTTTGCAGCCCAATAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTAAGGGCTCTGTGTCATaGGTTGGACAGAAACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: WHSPTLGNRAFTGPRASPKGSVS*VGQKLP Trigger: AGGGAGTTTCTGTCCAACCCATGACACAGAGCCCTT...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCGGAGTCTATCCTAGCTaGCTTCTGAGAATCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLGVYPS*LLRIST Trigger: GGTGGAGATTCTCAGAAGTCAGCTAGGATAGACTCC...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCTCTGTGTCATGGGTTaGACAGAAACTCCCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: WHSPTLGNRAFTGPRASPLCVMG*TETPSL Trigger: TAAAGAGGGAGTTTCTGTCCAACCCATGACACAGAG...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTCCCTACTAATTCCTAGTTCACATCTGAAATCTATTCCACATCCCCATCCCTCCCCCATCCCCTaGTCACCAAACCACCCACTT | + |
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Preference number: 2 (lower is better) Translates to: FPSLLIPSSHLKSIPHPHPSPIP*SPNHPL Trigger: AAGTGGGTGGTTTGGTGATCAGGGGATGGGGGAGGG...ATGGGGATGTGGAATAGATTTCAGATGTGAACTAGGAATTAGTAGGGAAGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTGATCAAAAACTAAGGTaGCAGCAGATGCTGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSDQKLR*QQMLSR Trigger: CCTTGACAGCATCTGCTGTCACCTTAGTTTTTGATC...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCATTACATTGGTACAGTaGCAGGCAGGTAGATCAATG | + |
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Preference number: 2 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLITLVQ*QAGRSM Trigger: CATTGATCTACCTGCCTGTCACTGTACCAATGTAAT...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTATGTGTGTTCTTTTGTaGATGGGTTACATCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: WHSPTLGNRAFTGPRASPMCVLL*MGYITQ Trigger: CTGAGTGATGTAACCCATTCACAAAAGAACACACAT...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCCATCCCACCCTACATTaGTTGATACTTTACTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLHPTLH*LILYSS Trigger: GGAAGAGTAAAGTATCAAGCAATGTAGGGTGGGATG...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTTCAGAAAGTTTCCACTaGACTACATTTCCACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSSESFH*TTFPPH Trigger: GTGGGGTGGAAATGTAGTGCAGTGGAAACTTTCTGA...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTGTTCCCAGTTCTCTTTaGAAATACCACATTAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: WHSPTLGNRAFTGPRASPVPSSL*KYHISF Trigger: GAAACTAATGTGGTATTTCCAAAGAGAACTGGGAAC...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTAAAACTGTATTACATTaGTACAGTGACAGGCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: WHSPTLGNRAFTGPRASPKTVLH*YSDRQV Trigger: TACCTGCCTGTCACTGTACCAATGTAATACAGTTTT...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTATTGGGCTGCAAACTTCTTCAGCTCCTTAGCTCTTTCATTGGGGACCCCATGTACAATTTTCTaGGGAACTGTCAAACTGATT | + |
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Preference number: 2 (lower is better) Translates to: SSYWAANFFSSLALSLGTPCTIF*GTVKLI Trigger: AATCAGTTTGACAGTTCCTCAGAAAATTGTACATGG...GGTCCCCAATGAAAGAGCTAAGGAGCTGAAGAAGTTTGCAGCCCAATAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCCTAGACCATTCAGAATaGCTAAGATCAAAAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLLDHSE*LRSKTK Trigger: CTTAGTTTTTGATCTTAGCCATTCTGAATGGTCTAG...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTTGTTGGGAGAGTGAATaGAGTTGGAAATTGGATTAT | + |
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Preference number: 2 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSCWESE*SWKLDY Trigger: ATAATCCAATTTCCAACTCCATTCACTCTCCCAACA...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTCCCTACTAATTCCTAGTTCACATCTGAAATCTATTCCACATCCCCATGGCATTCCCCTACATTaGGAAATAGAGCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: FPSLLIPSSHLKSIPHPHGIPLH*EIEPSQ Trigger: CTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCC...ATGGGGATGTGGAATAGATTTCAGATGTGAACTAGGAATTAGTAGGGAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTCCCTACTAATTCCTAGTTCACATCTGAAATCTATTCCACATCCCCATAGGCAGGTAGATCAATaGAATAGAGCTGAAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: FPSLLIPSSHLKSIPHPHRQVDQ*NRAEDP Trigger: TGGGTCTTCAGCTCTATTCCATTGATCTACCTGCCT...ATGGGGATGTGGAATAGATTTCAGATGTGAACTAGGAATTAGTAGGGAAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTGCTTCATATGCAGCTaGAGCCATGAGTCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVCFICS*SHESHH Trigger: ATGGTGGGACTCATGGCTCCAGCTGCATATGAAGCA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTCTCTCTCCCTTCCCTaGCTTTCCACAATAAACACC | + |
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Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVSLSLP*LSTINT Trigger: GGTGTTTATTGTGGAAAGGCAGGGAAGGGAGAGAGA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCCACCCTACATTGCTTaGTACTTTACTCTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVPPYIA*YFTLPF Trigger: GAAGGGAAGAGTAAAGTATCAAGCAATGTAGGGTGG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTTCCTCCTATTGGGCTaGAAACTTCTTCAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVFLLLG*KLLQLL Trigger: AAGGAGCTGAAGAAGTTTGCAGCCCAATAGGAGGAA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTCCCTACTAATTCCTAGTTCACATCTGAAATCTATTCCACATCCCCATGGGTCTAAGAAAATGTaGTGCAGTGGAAACTTTATG | + |
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Preference number: 2 (lower is better) Translates to: FPSLLIPSSHLKSIPHPHGSKKM*CSGNFM Trigger: CATAAAGTTTCCACTGCACCACATTTTCTTAGACCC...ATGGGGATGTGGAATAGATTTCAGATGTGAACTAGGAATTAGTAGGGAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCACTCAGTGCTACGATTaGTTACATAGCAACTGCACT | + |
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Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVTQCYD*LHSNCT Trigger: AGTGCAGTTGCTATGTAATCAATCGTAGCACTGAGT...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCGGTCTTCCTTCATCTTaGGTTCATGTGGTTTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVGLPSS*VHVVCE Trigger: TTCACAAACCACATGAACTCAAGATGAAGGAAGACC...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTTCCTAGTTCACATCTaGAATCTATTCCACATCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVFLVHI*NLFHIP Trigger: GGGGATGTGGAATAGATTTCAGATGTGAACTAGGAA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTCCTTCCACGGGTATTTTGTTCTCCCTTCAATGAAGGATCAAATTATCTCTTATGCTCTAAGATaGATAATTGGCAAAAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: CNSFHGYFVLPSMKDQIISYALR*IIGKRD Trigger: GTCCCTTTTGCCAATTATTCATCTTAGAGCATAAGA...GATAATTTGATCCTTCATTGAAGGGAGAACAAAATACCCGTGGAAGGAGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTTCTTCTTGTGTTGGTaGCAAATTAGGCCAGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVFFLCW*QIRPVI Trigger: AATGACTGGCCTAATTTGGCACCAACACAAGAAGAA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCATACTCTGTTATGCTTaGAGACAGGAGTCTATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVILCYA*RQESIL Trigger: TAGGATAGACTCCTGTCTGCAAGCATAACAGAGTAT...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CAA 90 bp | GTGAATAGGTACATTAAAAAGGATATATTCTCCGTAAGATGGTGCTaGACGAAGGTATATTTCTTAATCGAAGGTCTTCATACCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: VNRYIKKDIFSVRWC*TKVYFLIEGLHTMT Trigger: AGTCATGGTATGAAGACCTTCGATTAAGAAATATACCTTCGTCAAGCACCATCTTACGGAGAATATATCCTTTTTAATGTACCTATTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCATCTTGAGTTCATGTaGTTTGTGAATTGTATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVHLEFM*FVNCIL Trigger: CAAGATACAATTCACAAACCACATGAACTCAAGATG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCTTAGTTTACTCAAGTaGACAATCTTACCTTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVLSLLK*TILPFR Trigger: CCTAAAAGGTAAGATTGTCCACTTGAGTAAACTAAG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | CCACTTCCACTTCCTGGCCCTGGCATTCCCCTACATTaGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPLPGPGIPLH*EIEPSQDQGPL Trigger: GAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | CTGATCACCAAACCACCCACTTCCACTTCCTGGCCCTaGCATTCCCCTACATTGGGAAATAGAGCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LITKPPTSTSWP*HSPTLGNRAFT Trigger: TGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGTGGGTGGTTTGGTGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCCCATTGCTGATGGTATaGCAAGCTGGTAAAAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLPLLMV*QAGKNH Trigger: GTGGTTTTTACCAGCTTGCAATACCATCAGCAATGG...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | TTAGCTCTTTCATTGGGGACCCTGTGCTCTGTCCAATaGGTGGCTGTGAGCATCCACTTCTATATTAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LALSLGTLCSVQ*VAVSIHFYISQ Trigger: CTGACTAATATAGAAGTGGATGCTCACAGCCACCCATTGGACAGAGCACAGGGTCCCCAATGAAAGAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTGGAAATGATCCCTCATaGGATATGGTATTGGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WHSPTLGNRAFTGPRASPGNDPS*DMVLVK Trigger: TTTCACCAATACCATATCCAATGAGGGATCATTTCC...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTGTCAGCAAGCACTTCTaGGTATTCCACAATAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSVSKHF*VFHNNV Trigger: GACATTATTGTGGAATACCAAGAAGTGCTTGCTGAC...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTTTGTTTTTCCTCCTATaGGGCTGCAAACTTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSLFFLL*GCKLLQ Trigger: CTGAAGAAGTTTGCAGCCCAATAGGAGGAAAAACAA...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | ATTGCTGTAAGCTGTGAACCACCATTGCCCCCACCTTaGAGCAAGGTAGATTGTAGATGGAAAGTTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IAVSCEPPLPPP*SKVDCRWKVLG Trigger: CCCCAAAACTTTCCATCTACAATCTACCTTGCTTCAAGGTGGGGGCAATGGTGGTTCACAGCTTACAGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | ATAAGAGAAGAGGTCAAGGACAAGGGCTCTGTGTCATaGGTTGGACAGAAACTCCCTCTTTACTCAGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: IREEVKDKGSVS*VGQKLPLYSVL Trigger: TAGCACTGAGTAAAGAGGGAGTTTCTGTCCAACCCATGACACAGAGCCCTTGTCCTTGACCTCTTCTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTGGGCAACCAACAGATTaGGAAAAGATCTTTACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSGQPTD*EKIFTN Trigger: ATTGGTAAAGATCTTTTCCAAATCTGTTGGTTGCCC...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | CAAGGTTGTGCAGAAAGAGGAACACTCCTCCATTGCTaGTGGTATTGCAAGCTGGTAAAAACCACTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGCAERGTLLHC*WYCKLVKTTLE Trigger: TTCCAGAGTGGTTTTTACCAGCTTGCAATACCATCAGCAATGGAGGAGTGTTCCTCTTTCTGCACAACCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTTGTCCTTATTACATGTaGAAGCATCTTCTGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSCPYYM*KHLLGI Trigger: TATACCCAGAAGATGCTTCAACATGTAATAAGGACA...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | TATTCCACAATAATGTCTGGGTTTGGTGATTGTTTTTaGGATGGATCCCAAAGTGGAGCAATCTCTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YSTIMSGFGDCF*DGSQSGAISGW Trigger: CCACCCAGAGATTGCTCCACTTTGGGATCCATCCCAAAAACAATCACCAAACCCAGACATTATTGTGGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | TTGGACAGAAACTCCCTCTTTACTCAGTGCTACGATTaGTTACATAGCAACTGCACTACCTCAGGTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LDRNSLFTQCYD*LHSNCTTSGHV Trigger: TACATGACCTGAGGTAGTGCAGTTGCTATGTAATCAATCGTAGCACTGAGTAAAGAGGGAGTTTCTGTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | GACAGCTATATTAGGCTCCTGTCAGCAAGCACTTCTTaGTATTCCACAATAATGTCTGGGTTTGGTGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: DSYIRLLSASTS*YSTIMSGFGDC Trigger: ACAATCACCAAACCCAGACATTATTGTGGAATACCAAGAAGTGCTTGCTGACAGGAGCCTAATATAGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | GCCTATAATTTATCCTGTTTACAAGAAATCCTGGGATaGAGATGGAGCAGAGATTCAGGGAATGGCCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: AYNLSCLQEILG*RWSRDSGNGQT Trigger: AGTTTGGCCATTCCCTGAATCTCTGCTCCATCTCCATCCCAGGATTTCTTGTAAACAGGATAAATTATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | AGGCCACTATGTGACTTCATACTTAGTTTACTCAAGTaGACAATCTTACCTTTTAGGCCCTTAAGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPLCDFILSLLK*TILPFRPLRPA Trigger: TGCAGGCCTTAAGGGCCTAAAAGGTAAGATTGTCCACTTGAGTAAACTAAGTATGAAGTCACATAGTGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | GAGAAACAATGTGAAATAATGGAAACCTGTAACTGGTaGGTGTGTGGGTGCAGAATATCTCAAGGCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: EKQCEIMETCNW*VCGCRISQGQT Trigger: TGTTTGGCCTTGAGATATTCTGCACCCACACACTCACCAGTTACAGGTTTCCATTATTTCACATTGTTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | GAAATTGGATTATTTAGGATGAGAGATGGGGAGTTATaGAGTTATAGGAGCGATGGCTATATGGCCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EIGLFRMRDGEL*SYRSDGYMAMR Trigger: TCTCATGGCCATATAGCCATCGCTCCTATAACTCCATAACTCCCCATCTCTCATCCTAAATAATCCAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTTCCCTACTAATTCCTAGTTCACATCTGAAATCTATTCCACATCCCCATGCTAATACATCGGCATaGTTATTCTCACACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPSLLIPSSHLKSIPHPHANTSA*LFSHRG Trigger: TCCTCTGTGTGAGAATAACAATGCCGATGTATTAGC...ATGGGGATGTGGAATAGATTTCAGATGTGAACTAGGAATTAGTAGGGAAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCTGGCATTCCCCTACATaGGGAAATAGAGCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVWHSPT*GNRAFT Trigger: TGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | AAAACAATCCTGAGATTCCACCTAGACCATTCAGAATaGCTAAGATCAAAAACTAAGGTGACAGCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: KTILRFHLDHSE*LRSKTKVTADA Trigger: AGCATCTGCTGTCACCTTAGTTTTTGATCTTAGCCATTCTGAATGGTCTAGGTGGAATCTCAGGATTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | AATTTATCCTGTTTACAAGAAATCCTGGGATGGAGATaGAGCAGAGATTCAGGGAATGGCCAAACTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: NLSCLQEILGWR*SRDSGNGQTKT Trigger: AGTTTTAGTTTGGCCATTCCCTGAATCTCTGCTCCATCTCCATCCCAGGATTTCTTGTAAACAGGATAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | GTTTGGTCTTCCTTCATCTTGAGTTCATGTGGTTTGTaGATTGTATCTTGGATATTCCAAGCTTCTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VWSSFILSSCGL*IVSWIFQASRL Trigger: TAGCCTAGAAGCTTGGAATATCCAAGATACAATTCACAAACCACATGAACTCAAGATGAAGGAAGACCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAACTCCTTCCACGGGTATTTTGTTCTCCCTTCAATGAAGGATCAAATTATCGGGTATATGTACATATaGCTGGATTCTCAGATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CNSFHGYFVLPSMKDQIIGYMYI*LDSQIV Trigger: TACTATCTGAGAATCCAGCAATATGTACATATACCC...GATAATTTGATCCTTCATTGAAGGGAGAACAAAATACCCGTGGAAGGAGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCCCAGATCTATCCACTaGCCTAAGCATTTCATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVPRSIH*PKHFIN Trigger: ATTTATGAAATGCTTAGGCAAGTGGATAGATCTGGG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | AATGTGGTGCAGTGGAAACTTTATGAAATTTATGACTaGTATGGGGGATATTGTTTCCAACTTCTGGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NVVQWKLYEIYD*YGGYCFQLLVV Trigger: CACTACCAGAAGTTGGAAACAATATCCCCCATATCAGTCATAAATTTCATAAAGTTTCCACTGCACCACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR GCA 72 bp | CGGGAAATTTTCCTGAGCAGAAATACCAATATCTTATaGTCTAAGATGAATAATTGGCAAAAGGGACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: REIFLSRNTNIL*SKMNNWQKGPH Trigger: ATGAGGTCCCTTTTGCCAATTATTCATCTTAGAGCATAAGATATTGGTATTTCTGCTCAGGAAAATTTCCCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR GCA 72 bp | ACTGTCAAACTGATTTCCAAAATGGTTGTACAAGCTTaGAACCCAACCTACAGAGCATTTGTGATAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TVKLISKMVVQA*NPTYRAFVIKT Trigger: AGTTTTTATCACAAATGCTCTGTAGGTTGGGTTGCAAGCTTGTACAACCATTTTGGAAATCAGTTTGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | ACCTACAGAGCATTTGTGATAAAAACTGTATTACATTaGTACAGTGACAGGCAGGTAGATCAATGGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: TYRAFVIKTVLH*YSDRQVDQWNR Trigger: TCTATTCCATTGATCTACCTGCCTGTCACTGTACCAATGTAATACAGTTTTTATCACAAATGCTCTGTAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCATGTGGTTTGTGAATaGTATCTTGGATATTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVHVVCE*YLGYSK Trigger: CTTGGAATATCCAAGATACAATTCACAAACCACATG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCAAATTATCTACAGTTaGGTCTTCCTTCATCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVQIIYS*VFLHLE Trigger: CTCAAGATGAAGGAAGACCAAACTGTAGATAATTTG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCGAGCTCTGGTGGAACTaGTTAGTTCATATTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVELWWN*LVHIVF Trigger: AAAAACAATATGAACTAACAAGTTCCACCAGAGCTC...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | TATAAACAGAGTGGAGAATGTGTCCTTATTACATGTTaGAGCATCTTCTGGGTATATGTACATATTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YKQSGECVLITC*SIFWVYVHIAG Trigger: TCCAGCAATATGTACATATACCCAGAAGATGCTTCAACATGTAATAAGGACACATTCTCCACTCTGTTTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | AAAATGGGGTACAGAGCTAAACAAATAATTCTCAATTaGGGAATAATGAATGGCTCAGAAGCACCTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KMGYRAKQIILN*GIMNGSEAPKE Trigger: TTCTTTAGGTGCTTCTGAGCCATTCATTATTCCTCAATTGAGAATTATTTGTTTAGCTCTGTACCCCATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR TCA 72 bp | ATAAATGTACCACATTTTCTATATCCAGTCCTCTGTTaGGGAACATTTCGGTTATTTCTAGCTTCTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: INVPHFLYPVLC*GTFRLFLASDY Trigger: ATAGTCAGAAGCTAGAAATAACCGAAATGTTCCTCAACAGAGGACTGGATATAGAAAATGTGGTACATTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR GCA 72 bp | AGGTACATTAAAAAGGATATATTCTCCGTAAGATGGTaGTTGACGAAGGTATATTTCTTAATCGAAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RYIKKDIFSVRW*LTKVYFLIEGL Trigger: AAGACCTTCGATTAAGAAATATACCTTCGTCAAGCACCATCTTACGGAGAATATATCCTTTTTAATGTACCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CCA 72 bp | AGAAATACCAATATCTTATGCTCTAAGATGAATAATTaGCAAAAGGGACCTCATAATATTGCAAAGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNTNILCSKMNN*QKGPHNIAKPL Trigger: CAGAGGCTTTGCAATATTATGAGGTCCCTTTTGCCAATTATTCATCTTAGAGCATAAGATATTGGTATTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| 3UTR CAA 72 bp | CCCACTTCCACTTCCTGGCCCTGGCATTCCCCTACATaGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSTSWPWHSPT*GNRAFTGPRAS Trigger: AGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTTGTCTACAGGAGACGTACCATaGAGACACTGGCCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRPAPLKTSLLTLTTLSTGDVP*RHWPRP Trigger: TGGTCTGGGCCAGTGTCTCCATGGTACGTCTCCTGT...AGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTATTCTTGCTCCCTTGTTCACCCTCTCTCCGCCTTCCCTTACCCCCTCAGCAACACAATGCTATaGGCTGCTCTGATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFYSCSLVHPLSAFPYPLSNTML*AALISA Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGTGTTGCT...GAGGGGGTAAGGGAAGGCGGAGAGAGGGTGAACAAGGGAGCAAGAATAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTTTGGAAACACAGTCATaGATAGAATTAAGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WHSPTLGNRAFTGPRASPLETQS*IELRCW Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTTCCAA...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCTATTGGGCTGCAAACTTCTTCAGCTCCTTAGCTCTTTCATTGGGGACCGCCTCAACCACAGATTaGAGTCTACAAAAACAATGT | + |
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Preference number: 4 (lower is better) Translates to: SSYWAANFFSSLALSLGTASTTD*SLQKQC Trigger: ACATTGTTTTTGTAGACTCCAATCTGTGGTTGAGGC...GGTCCCCAATGAAAGAGCTAAGGAGCTGAAGAAGTTTGCAGCCCAATAGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | CTGTCAAGGTTGTGCAGAAAGAGGAACACTCCTCCATaGCTGATGGTATTGCAAGCTGGTAAAAACCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LSRLCRKRNTPP*LMVLQAGKNHS Trigger: AGAGTGGTTTTTACCAGCTTGCAATACCATCAGCAATGGAGGAGTGTTCCTCTTTCTGCACAACCTTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | GCACCCCTCAAGACTTCTCTGCTTACTTTGACAACCTaGTCTAACAGTTTTAGACGTCCTTCACAGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: APLKTSLLTLTT*SNSFRRPSQTS Trigger: GGAAGTCTGTGAAGGACGTCTAAAACTGTTAGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTATTGGGCTGCAAACTTCTTCAGCTCCTTAGCTCTTTCATTGGGGACCCTGGCTTTTTATAGTTaGAGATCAGAGAACAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SSYWAANFFSSLALSLGTLAFYS*RSENKD Trigger: ATCCTTGTTCTCTGATCTTCAACTATAAAAAGCCAG...GGTCCCCAATGAAAGAGCTAAGGAGCTGAAGAAGTTTGCAGCCCAATAGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | ACTTCTTCTTGTGTTGGTGCCAAATTAGGCCAGTCATaGGTTGTGATTGCTGTAAGCTGTGAACCACCATTG | + |
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Preference number: 4 (lower is better) Translates to: TSSCVGAKLGQS*VVIAVSCEPPL Trigger: CAATGGTGGTTCACAGCTTACAGCAATCACAACCAATGACTGGCCTAATTTGGCACCAACACAAGAAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | TTAAGGCCTGCACCCCTCAAGACTTCTCTGCTTACTTaGACAACCTTGTCTAACAGTTTTAGACGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRPAPLKTSLLT*TTLSNSFRRPS Trigger: TGAAGGACGTCTAAAACTGTTAGACAAGGTTGTCAAAGTAAGCAGAGAAGTCTTGAGGGGTGCAGGCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | GAAGACCCAGAAATGAACCAACACACCTGTGGTCACTaGATCTTTGACAAAGAAACTAAAACCATCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EDPEMNQHTCGH*IFDKETKTIQW Trigger: CCACTGGATGGTTTTAGTTTCTTTGTCAAAGATCAAGTGACCACAGGTGTGTTGGTTCATTTCTGGGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCAGCATAGCCTCTGTTaGCTTGATGGGGAGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVQHSLC*LDGEGK Trigger: TTTTCCCTCCCCATCAAGGCAACAGAGGCTATGCTG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | GACTTCATTAAGGTTTTGCTAGTAGTGTCTATATCTTaGAGCTATCTGGTATCCCTTTCATGGTCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: DFIKVLLVVSIS*SYLVSLSWSHR Trigger: CCTGTGTGACCATGAAAGGGATACCAGATAGCTCAAAGATATAGACACTACTAGCAAAACCTTAATGAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | TTGACATGCTTACTGGCCATGAGGAATACATTAAACTaGTCACTCAGGCCACTATGTGACTTCATACTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LTCLLAMRNTLN*SLRPLCDFILS Trigger: ACTAAGTATGAAGTCACATAGTGGCCTGAGTGACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS-3UTR GCA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCCAAGTTTGTGCTTCTTaGTACCATGTATACAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVQVCAS*YHVYKV Trigger: TACTTTGTATACATGGTAGCAAGAAGCACAAACTTG...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| 3UTR CAA 72 bp | GACACTGACAATATGATAAATGGGCAACCAACAGATTaGGAAAAGATCTTTACCAATCCTATATCCGATAGA | + |
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Preference number: 4 (lower is better) Translates to: DTDNMINGQPTD*EKIFTNPISDR Trigger: TCTATCGGATATAGGATTGGTAAAGATCTTTTCCAAATCTGTTGGTTGCCCATTTATCATATTGTCAGTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS-3UTR CAA 90 bp | TGGCATTCCCCTACATTGGGAAATAGAGCCTTCACAGGACCAAGGGCCTCTCCTTGCCTCAACCACAGATaGGAGTCTACAAAAACAATG | + |
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Preference number: 5 (lower is better) Translates to: WHSPTLGNRAFTGPRASPCLNHR*ESTKTM Trigger: CATTGTTTTTGTAGACTCCAATCTGTGGTTGAGGCA...AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATTTCCCAATGTAGGGGAATGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS TCA 90 bp | CTGGACACAGCCATGTTAGCACAAATCACTTCTTTGGGTCTCAGCTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGACAAACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LDTAMLAQITSLGLS*HPVKSGEKLWTNRR Trigger: TCTTCTGTTTGTCCATAATTTCTCTCCACTTTTGACTGGATGTCAGCTGAGACCCAAAGAAGTGATTTGTGCTAACATGGCTGTGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098704.3 |
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| CDS-3UTR CAA 90 bp | CTTAACAATACTCTTGACATGCTTACTGGCCATGAGGAATACATTAAACTTGTCATAGCCTCTGTTGCCTaGATGGGGAGGGAAAATGTA | + |
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Preference number: 5 (lower is better) Translates to: LNNTLDMLTGHEEYIKLVIASVA*MGRENV Trigger: TACATTTTCCCTCCCCATCAAGGCAACAGAGGCTAT...GACAAGTTTAATGTATTCCTCATGGCCAGTAAGCATGTCAAGAGTATTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235361.2 |
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| CDS TCA 72 bp | GCCATGTTAGCACAAATCACTTCTTTGGGTCTCAGCTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGACA | + |
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Preference number: 6 (lower is better) Translates to: AMLAQITSLGLS*HPVKSGEKLWT Trigger: TGTCCATAATTTCTCTCCACTTTTGACTGGATGTCAGCTGAGACCCAAAGAAGTGATTTGTGCTAACATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098704.3 |
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| CDS GCA 72 bp | GATAGGTGCTCAAGACACAGGTGGAACACAAGTTTGTaGTTCTTGCTACCATGTATACAAAGTACTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: DRCSRHRWNTSL*FLLPCIQSTQV Trigger: AACTTGAGTACTTTGTATACATGGTAGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCTTGAGCACCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098704.3 ENSMUST00000235361.2 |
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| CDS CCA 72 bp | CACTTCTTTGGGTCTCAGCTGACATCCAGTCAAAAGTaGAGAGAAATTATGGACAAACAGAAGAATGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: HFFGSQLTSSQK*REIMDKQKNVS Trigger: GCTAACATTCTTCTGTTTGTCCATAATTTCTCTCCACTTTTGACTGGATGTCAGCTGAGACCCAAAGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098704.3 |
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| CDS CAA 72 bp | ACTGATAGGTGCTCAAGACACAGGTGGAACACAAGTTaGTGCTTCTTGCTACCATGTATACAAAGTACTCAA | + |
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Preference number: 6 (lower is better) Translates to: TDRCSRHRWNTS*CFLLPCIQSTQ Trigger: TTGAGTACTTTGTATACATGGTAGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCTTGAGCACCTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098704.3 ENSMUST00000235361.2 |
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| CDS CAA 90 bp | ACTGATAGGTGCTCAAGACACAGGTGGAACACAAGTTTGTGCTTCTaGCTACCATGTATACAAAGTACTCAAGTTTACATTGAAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: TDRCSRHRWNTSLCF*LPCIQSTQVYIEGH Trigger: ATGACCTTCAATGTAAACTTGAGTACTTTGTATACATGGTAGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCTTGAGCACCTATCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098704.3 ENSMUST00000235361.2 |
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