RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R167 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090715

Ensembl transcript IDs: ENSMUST00000164527.2, ENSMUST00000227713.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTTCTTCTCTCTCCCAACATTCAGCTCCACATTCCCTTTCTCTaGCCATCACTAGCTCTAGCCTTTATTTTACCTATTAAAATGGGA +
Preference number: 1 (lower is better)
Translates to: ALLLSPNIQLHIPFL*PSLALAFILPIKMG
Trigger: TCCCATTTTAATAGGTAAAATAAAGGCTAGAGCTAGTGATGGGCAGAGAAAGGGAATGTGGAGCTGAATGTTGGGAGAGAGAAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
3UTR-3UTR GCA 90 bp TCATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCCACATTCCCTTTCTCTaGCCATCACTAGCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: SFLISFLKEQRDVKQFLCHIPFL*PSLALA
Trigger: GGCTAGAGCTAGTGATGGGCAGAGAAAGGGAATGTG...GCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAAGGAAATAAGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
3UTR-3UTR CAA 90 bp TTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCATCACAGGCTCAGCTCTGAGTGCTGACTCATaGCTTATTCACAACCCTTCC +
Preference number: 3 (lower is better)
Translates to: FLKEQRDVKQFLCITGSALSADS*LIHNPS
Trigger: GGAAGGGTTGTGAATAAGCAATGAGTCAGCACTCAG...AGCTGAGCCTGTGATGCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
3UTR GCA 72 bp CTCTCTCCCAACATTCAGCTCCACATTCCCTTTCTCTaGCCATCACTAGCTCTAGCCTTTATTTTACCTATT +
Preference number: 3 (lower is better)
Translates to: LSPNIQLHIPFL*PSLALAFILPI
Trigger: AATAGGTAAAATAAAGGCTAGAGCTAGTGATGGGCAGAGAAAGGGAATGTGGAGCTGAATGTTGGGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
3UTR GCA 72 bp TTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTaGATCACAGGCTCAGCTGGATATGCAGCTATAGTA +
Preference number: 3 (lower is better)
Translates to: FLKEQRDVKQFL*ITGSAGYAAIV
Trigger: TACTATAGCTGCATATCCAGCTGAGCCTGTGATGCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
3UTR CCA 72 bp AGATGTAAAACAGTTTCTCTGCATCACAGGCTCAGCTaGATATGCAGCTATAGTATGAGCAGCAATGTATTG +
Preference number: 3 (lower is better)
Translates to: RCKTVSLHHRLS*ICSYSMSSNVL
Trigger: CAATACATTGCTGCTCATACTATAGCTGCATATCCAGCTGAGCCTGTGATGCAGAGAAACTGTTTTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp CCCTTCTTCTCTCTCCCAACATTCAGCTCCACATTCCCTTTCTCTGCCCATCACTCTGAGCTTCTGATTTaGGGATTGAATATACTGCAG +
Preference number: 4 (lower is better)
Translates to: PFFSLPTFSSTFPFSAHHSELLI*GLNILQ
Trigger: CTGCAGTATATTCAATCCCCAAATCAGAAGCTCAGA...GTGATGGGCAGAGAAAGGGAATGTGGAGCTGAATGTTGGGAGAGAGAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp CCCTTCTTCTCTCTCCCAACATTCAGCTCCACATTCCCTTTCTCTGCCCATCACTCATTATGTGTTTTCTaGGGACCACTGACTTTCATT +
Preference number: 4 (lower is better)
Translates to: PFFSLPTFSSTFPFSAHHSLCVF*GPLTFI
Trigger: AATGAAAGTCAGTGGTCCCCAGAAAACACATAATGA...GTGATGGGCAGAGAAAGGGAATGTGGAGCTGAATGTTGGGAGAGAGAAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp TTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCATCACAGGCTCAGCTTATACCTCACAAATTTaGGGGCTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLKEQRDVKQFLCITGSAYTSQI*GLFQGA
Trigger: TGCTCCTTGGAAGAGCCCCCAAATTTGTGAGGTATA...AGCTGAGCCTGTGATGCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR TCA 90 bp ACTGTGCACCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTAAACAGGTTACAAATGTaGCCACCAGCATCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TVHLDCADLLLHYHLSYLNRLQM*PPASGW
Trigger: CCATCCTGATGCTGGTGGTCACATTTGTAACCTGTT...TAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGGTGCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp ACATGTAGCACTAGGGCTCTCTGCAACAGTTGGCCAAGAAACACGTTAAGTGTAGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTCT +
Preference number: 4 (lower is better)
Translates to: TCSTRALCNSWPRNTLSVEPLPL*FSQIYS
Trigger: AGAATAAATCTGTGAAAACCACAGAGGAAGTGGCTC...TACACTTAACGTGTTTCTTGGCCAACTGTTGCAGAGAGCCCTAGTGCTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp CCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTATGAGACCCATGAACACTCCATCATaGGCAAATGATAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: PRLCRSTTSLPSFLSMRPMNTPS*ANDKMR
Trigger: GCGCATCTTATCATTTGCCCATGATGGAGTGTTCAT...GGGTCTCATAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CCA 90 bp CCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTATGAGACCCTACTGCAGTCTTTGGTaGTGTCTGTTCAGGAGAATT +
Preference number: 4 (lower is better)
Translates to: PRLCRSTTSLPSFLSMRPYCSLW*CLFRRI
Trigger: AATTCTCCTGAACAGACACCACCAAAGACTGCAGTA...GGGTCTCATAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR TCA 90 bp CCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTATGAGACCCTTCACAGATTTATTCTaGGACAACATGGAGACAACT +
Preference number: 4 (lower is better)
Translates to: PRLCRSTTSLPSFLSMRPFTDLF*DNMETT
Trigger: AGTTGTCTCCATGTTGTCTCAGAATAAATCTGTGAA...GGGTCTCATAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR TCA 90 bp ACTCATTGCTTATTCACAACCCTTCCCAAGAACAGAATTAGCATCAAATTACATTCTCAGCATGAACTCTaGGCTTCTGATTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: THCLFTTLPKNRISIKLHSQHEL*ASDLGI
Trigger: AATCCCCAAATCAGAAGCTCAGAGTTCATGCTGAGA...ATGTAATTTGATGCTAATTCTGTTCTTGGGAAGGGTTGTGAATAAGCAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp GTGCTTCTGCTCTACTTTCCTTCCTCCTCCTCCATCATCCTCTCTCTCTCCCTCAATATACTGCAGTCTTaGGTGGTGTCTGTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: VLLLYFPSSSSIILSLSLNILQS*VVSVQE
Trigger: CTCCTGAACAGACACCACCAAAGACTGCAGTATATT...GAGGGAGAGAGAGAGGATGATGGAGGAGGAGGAAGGAAAGTAGAGCAGAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp CCCTTCTTCTCTCTCCCAACATTCAGCTCCACATTCCCTTTCTCTGCCCATCACGCTTACAGCCAAAATTaGGTTTACACGCCTCAACCA +
Preference number: 5 (lower is better)
Translates to: PFFSLPTFSSTFPFSAHHAYSQN*VYTPQP
Trigger: TGGTTGAGGCGTGTAAACCAAATTTTGGCTGTAAGC...GTGATGGGCAGAGAAAGGGAATGTGGAGCTGAATGTTGGGAGAGAGAAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS GCA 90 bp ATAACAGGTTACAAATGTGACCACCAGCATCAGGATGGTGTGGGCTaGTCTAGTCTCAGCATGAACTCTGAGCTTCTGATTTGGGGATTG +
Preference number: 5 (lower is better)
Translates to: ITGYKCDHQHQDGVG*SSLSMNSELLIWGL
Trigger: CAATCCCCAAATCAGAAGCTCAGAGTTCATGCTGAGACTAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTAACCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp GTGCTTCTGCTCTACTTTCCTTCCTCCTCCTCCATCATCCTCTCTCTCTCCCTCTTTTATGGGTCTCTGTaGAGATCCATTCAAGATTGG +
Preference number: 5 (lower is better)
Translates to: VLLLYFPSSSSIILSLSLFYGSL*RSIQDW
Trigger: CCAATCTTGAATGGATCTCAACAGAGACCCATAAAA...GAGGGAGAGAGAGAGGATGATGGAGGAGGAGGAAGGAAAGTAGAGCAGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp TTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCATCACAGGCTCAGCTGTATACCTCACAAATTaGGGGGCTCTTCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: FLKEQRDVKQFLCITGSAVYLTN*GALPRS
Trigger: GCTCCTTGGAAGAGCCCCCAAATTTGTGAGGTATAC...AGCTGAGCCTGTGATGCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS CCA 90 bp CCCCAACCTGGCAAAGCAAGAGGATCTGAAGAGCCACTTCCTCTGTaGTTTTCACAGATTTATTCTGAGACAACATGGAGACAACTTCAT +
Preference number: 5 (lower is better)
Translates to: PQPGKARGSEEPLPL*FSQIYSETTWRQLH
Trigger: ATGAAGTTGTCTCCATGTTGTCTCAGAATAAATCTGTGAAAACCACAGAGGAAGTGGCTCTTCAGATCCTCTTGCTTTGCCAGGTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp CCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTATGAGACCCAGGAGAATCAAGGTATaGCCCACAGCTAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: PRLCRSTTSLPSFLSMRPRRIKV*PTAKLA
Trigger: AGCCAACTTAGCTGTGGGCAATACCTTGATTCTCCT...GGGTCTCATAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp CCTAGATTGTGCAGATCTACTACTTCACTACCATCTTTCCTATCTATGAGACCCACAATCAGAAAAATGTaGACTGCAGTCCCAACCCCA +
Preference number: 5 (lower is better)
Translates to: PRLCRSTTSLPSFLSMRPTIRKM*TAVPTP
Trigger: TGGGGTTGGGACTGCAGTCAACATTTTTCTGATTGT...GGGTCTCATAGATAGGAAAGATGGTAGTGAAGTAGTAGATCTGCACAATCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS TCA 90 bp ATCCATTCAAGATTGGAGATAAATTATGAACAATCAGAAAAATGTTaGCTGCAGTCCCAACCCCAACCTGGCAAAGCAAGAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: IHSRLEINYEQSEKC*LQSQPQPGKARGSE
Trigger: TTCAGATCCTCTTGCTTTGCCAGGTTGGGGTTGGGACTGCAGTCAACATTTTTCTGATTGTTCATAATTTATCTCCAATCTTGAATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp TCATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCTTGCCCACAGCTAAGTaGGCTAGAATGACTTTTATG +
Preference number: 5 (lower is better)
Translates to: SFLISFLKEQRDVKQFLCLPTAK*ARMTFM
Trigger: CATAAAAGTCATTCTAGCCAACTTAGCTGTGGGCAA...GCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAAGGAAATAAGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS-3UTR CAA 90 bp TCATTTCTTATTTCCTTTCTCAAGGAGCAGAGAGATGTAAAACAGTTTCTCTGCGTAGAGCAAACCCACTaGCTTTTAGAATTGGTATCA +
Preference number: 5 (lower is better)
Translates to: SFLISFLKEQRDVKQFLCVEQTH*LLELVS
Trigger: TGATACCAATTCTAAAAGCAAGTGGGTTTGCTCTAC...GCAGAGAAACTGTTTTACATCTCTCTGCTCCTTGAGAAAGGAAATAAGAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227713.2
CDS CCA 72 bp ACAACCAACAACTATAACAAGTATACCTCACAAATTTaGGGGCTCTTCCAAGGAGCATCACCCTACCCCAGG +
Preference number: 6 (lower is better)
Translates to: TTNNYNKYTSQI*GLFQGASPYPR
Trigger: CCTGGGGTAGGGTGATGCTCCTTGGAAGAGCCCCCAAATTTGTGAGGTATACTTGTTATAGTTGTTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS CCA 72 bp AATGGAGAAAAGGTAGGGAAGCTTACAGCCAAAATTTaGTTTACACGCCTCAACCAGAGCCGAGAGTCCACA +
Preference number: 6 (lower is better)
Translates to: NGEKVGKLTAKI*FTRLNQSREST
Trigger: TGTGGACTCTCGGCTCTGGTTGAGGCGTGTAAACCAAATTTTGGCTGTAAGCTTCCCTACCTTTTCTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS CAA 90 bp GGCTGCTCTAGTCTCAGCATGAACTCTGAGCTTCTGATTTGGGGATaGAATATACTGCAGTCTTTGGTGGTGTCTGTTCAGGAGAATTAC +
Preference number: 6 (lower is better)
Translates to: GCSSLSMNSELLIWG*NILQSLVVSVQENY
Trigger: GTAATTCTCCTGAACAGACACCACCAAAGACTGCAGTATATTCAATCCCCAAATCAGAAGCTCAGAGTTCATGCTGAGACTAGAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS CAA 72 bp GAGCTTCTGATTTGGGGATTGAATATACTGCAGTCTTaGGTGGTGTCTGTTCAGGAGAATTACCATGGAGAC +
Preference number: 6 (lower is better)
Translates to: ELLIWGLNILQS*VVSVQENYHGD
Trigger: GTCTCCATGGTAATTCTCCTGAACAGACACCACCAAAGACTGCAGTATATTCAATCCCCAAATCAGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS CAA 72 bp AGTCTCAGCATGAACTCTGAGCTTCTGATTTGGGGATaGAATATACTGCAGTCTTTGGTGGTGTCTGTTCAG +
Preference number: 6 (lower is better)
Translates to: SLSMNSELLIWG*NILQSLVVSVQ
Trigger: CTGAACAGACACCACCAAAGACTGCAGTATATTCAATCCCCAAATCAGAAGCTCAGAGTTCATGCTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS CAA 90 bp AAAATTGTCATATTGTTTGGAAATGCAAAGAGGAGAATCAAGGTATaGCCCACAGCTAAGTTGGCTAGAATGACTTTTATGGGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: KIVILFGNAKRRIKV*PTAKLARMTFMGLC
Trigger: ACAGAGACCCATAAAAGTCATTCTAGCCAACTTAGCTGTGGGCAATACCTTGATTCTCCTCTTTGCATTTCCAAACAATATGACAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2
CDS TCA 72 bp TGTGTTTTCTGGGGACCACTGACTTTCATTGGAATATaGGCATTATTTAAGACACTGAACAACCAACAACTA +
Preference number: 6 (lower is better)
Translates to: CVFWGPLTFIGI*ALFKTLNNQQL
Trigger: TAGTTGTTGGTTGTTCAGTGTCTTAAATAATGCTCATATTCCAATGAAAGTCAGTGGTCCCCAGAAAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164527.2
ENSMUST00000227713.2