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Pregenerated sensors for VMN1R159 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095931

Ensembl transcript IDs: ENSMUST00000167871.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGGATAGTACGGGTTGCTTTGGACTCAGCTTGGCCTCTGGTGTTCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATGG +
Preference number: 5 (lower is better)
Translates to: RIVRVALDSAWPLVF*LGVRMCCIRWRCLW
Trigger: CCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGAACACCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 90 bp AACCAGTCAAGACTGGATAGAAATTATGGACAAACAGAAAGACATTaGCCAAGGTCCCAACCCCAAACTGGCAAAGCAAGAGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: NQSRLDRNYGQTERH*PRSQPQTGKARGVE
Trigger: TTCAACTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTATCCAGTCTTGACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 90 bp GGAAATATAGTGAGGAATAGAGTCAAGGCATTGGCCACAGACATGTaGCTTAAAATCACCTGTCTGGGTCTCTGTTTAGAACCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: GNIVRNRVKALATDM*LKITCLGLCLEPVK
Trigger: CTTGACTGGTTCTAAACAGAGACCCAGACAGGTGATTTTAAGCCACATGTCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS TCA 90 bp CTGAGTATAAGTTTACCTCTATTAACAAGAACAAGAGTGACAAACTaGTGGATACTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSISLPLLTRTRVTN*WILRTQVEHKFVLL
Trigger: AAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCACTCTTGTTCTTGTTAATAGAGGTAAACTTATACTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS GCA 90 bp AAACCAACAACCGTAACAAGAATAACTCACCAAATTTGGGACACTTaGTCTGAGTATAAGTTTACCTCTATTAACAAGAACAAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: KPTTVTRITHQIWDT*SEYKFTSINKNKSD
Trigger: GTCACTCTTGTTCTTGTTAATAGAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGGTGAGTTATTCTTGTTACGGTTGTTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 90 bp GACACTGAAAAACCAACAACCGTAACAAGAATAACTCACCAAATTTaGGACACTTGCTCTGAGTATAAGTTTACCTCTATTAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: DTEKPTTVTRITHQI*DTCSEYKFTSINKN
Trigger: GTTCTTGTTAATAGAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGGTGAGTTATTCTTGTTACGGTTGTTGGTTTTTCAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 72 bp GGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATaGAGGAGAAGTACCATGGAGACACTGGTCCAGACC +
Preference number: 6 (lower is better)
Translates to: GVRMCCIRWRCL*RRSTMETLVQT
Trigger: GGTCTGGACCAGTGTCTCCATGGTACTTCTCCTCCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CAA 72 bp CAGCATCAGGATAGTACGGGTTGCTTTGGACTCAGCTaGGCCTCTGGTGTTCTGATTGGGAGTGAGGATGTG +
Preference number: 6 (lower is better)
Translates to: QHQDSTGCFGLS*ASGVLIGSEDV
Trigger: CACATCCTCACTCCCAATCAGAACACCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCTGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CAA 90 bp TGTGAACACCAGCATCAGGATAGTACGGGTTGCTTTGGACTCAGCTaGGCCTCTGGTGTTCTGATTGGGAGTGAGGATGTGCTGCATTCG +
Preference number: 6 (lower is better)
Translates to: CEHQHQDSTGCFGLS*ASGVLIGSEDVLHS
Trigger: CGAATGCAGCACATCCTCACTCCCAATCAGAACACCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCTGATGCTGGTGTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 72 bp CACCTGTCTGGGTCTCTGTTTAGAACCAGTCAAGACTaGATAGAAATTATGGACAAACAGAAAGACATTGGC +
Preference number: 6 (lower is better)
Translates to: HLSGSLFRTSQD*IEIMDKQKDIG
Trigger: GCCAATGTCTTTCTGTTTGTCCATAATTTCTATCCAGTCTTGACTGGTTCTAAACAGAGACCCAGACAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 72 bp TCTGTTATCTGTGGACCAGTGACCTTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACCG +
Preference number: 6 (lower is better)
Translates to: SVICGPVTLIGM*MLLKTLKNQQP
Trigger: CGGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAAGGTCACTGGTCCACAGATAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS GCA 72 bp ACCGTAACAAGAATAACTCACCAAATTTGGGACACTTaGTCTGAGTATAAGTTTACCTCTATTAACAAGAAC +
Preference number: 6 (lower is better)
Translates to: TVTRITHQIWDT*SEYKFTSINKN
Trigger: GTTCTTGTTAATAGAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGGTGAGTTATTCTTGTTACGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2
CDS CCA 72 bp AAACCAACAACCGTAACAAGAATAACTCACCAAATTTaGGACACTTGCTCTGAGTATAAGTTTACCTCTATT +
Preference number: 6 (lower is better)
Translates to: KPTTVTRITHQI*DTCSEYKFTSI
Trigger: AATAGAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGGTGAGTTATTCTTGTTACGGTTGTTGGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167871.2