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Pregenerated sensors for VMN1R158 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094700

Ensembl transcript IDs: ENSMUST00000174643.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGGATAGTACGGGTTGCTCTGGACTCAGCTTGGCCTCTGGCGTCCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATGG +
Preference number: 5 (lower is better)
Translates to: RIVRVALDSAWPLAS*LGVRMCCIRWRCLW
Trigger: CCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGTCCAGAGCAACCCGTACTATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 90 bp ACAAGTTTACCTTTCCCTCTATTAAGAGGAACCAGAGTGACAAACTaGTGGAAACTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TSLPFPLLRGTRVTN*WKLRTQVEHKFVLL
Trigger: AAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAGTTTCCATCAGTTTGTCACTCTGGTTCCTCTTAATAGAGGGAAAGGTAAACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 90 bp AGTGCCTACACTGAATCCAGAAGTGGAACAGAACAACTTTCTGTTTaGGTCAGTGTTATTGTCTTTTATCTGTGGACCACTGACCTTAAT +
Preference number: 5 (lower is better)
Translates to: SAYTESRSGTEQLSV*VSVIVFYLWTTDLN
Trigger: ATTAAGGTCAGTGGTCCACAGATAAAAGACAATAACACTGACTCAAACAGAAAGTTGTTCTGTTCCACTTCTGGATTCAGTGTAGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 72 bp CGGGTTGCTCTGGACTCAGCTTGGCCTCTGGCGTCCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: RVALDSAWPLAS*LGVRMCCIRWR
Trigger: TCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGTCCAGAGCAACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS CCA 72 bp CACCTGTCTGGGCCTCTGTTTAGAACCAGTCAAGACTaGAGAGAAATTACGGACAAACAGAAAGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: HLSGPLFRTSQD*REITDKQKDFG
Trigger: GCCAAAGTCTTTCTGTTTGTCCGTAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 72 bp CCTTTCCCTCTATTAAGAGGAACCAGAGTGACAAACTaGTGGAAACTCAGGACACAGGTGGAACACAAGTTT +
Preference number: 6 (lower is better)
Translates to: PFPLLRGTRVTN*WKLRTQVEHKF
Trigger: AAACTTGTGTTCCACCTGTGTCCTGAGTTTCCATCAGTTTGTCACTCTGGTTCCTCTTAATAGAGGGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 72 bp CATCATAGGCAAACTGCAAGAGGACAGTGCCTACACTaGATCCAGAAGTGGAACAGAACAACTTTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: HHRQTARGQCLH*IQKWNRTTFCL
Trigger: CAAACAGAAAGTTGTTCTGTTCCACTTCTGGATTCAGTGTAGGCACTGTCCTCTTGCAGTTTGCCTATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 72 bp CAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCAGTT +
Preference number: 6 (lower is better)
Translates to: QVEHKFVLLATR*LKDSNLHLSSV
Trigger: AACTGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS TCA 72 bp ACTGAATCCAGAAGTGGAACAGAACAACTTTCTGTTTaGGTCAGTGTTATTGTCTTTTATCTGTGGACCACT +
Preference number: 6 (lower is better)
Translates to: TESRSGTEQLSV*VSVIVFYLWTT
Trigger: AGTGGTCCACAGATAAAAGACAATAACACTGACTCAAACAGAAAGTTGTTCTGTTCCACTTCTGGATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2
CDS CAA 72 bp GTGGAACAGAACAACTTTCTGTTTGAGTCAGTGTTATaGTCTTTTATCTGTGGACCACTGACCTTAATTGGA +
Preference number: 6 (lower is better)
Translates to: VEQNNFLFESVL*SFICGPLTLIG
Trigger: TCCAATTAAGGTCAGTGGTCCACAGATAAAAGACAATAACACTGACTCAAACAGAAAGTTGTTCTGTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174643.2