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Pregenerated sensors for VMN1R152 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095383

Ensembl transcript IDs: ENSMUST00000168326.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ATGGAGACACTGGTCCAGACCATGATGGTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAACCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: METLVQTMMVMNVAS*ENCKKTMPTMNPEV
Trigger: CACTTCTGGGTTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGACCATCATGGTCTGGACCAGTGTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 90 bp AGCTTGGCCTCTGGCATCCTGATTGGGAGTGAGGATGTGCTGCATTaGCTGGCGATGTCTATGGAGGAGAAGTACCATGGAGACACTGGT +
Preference number: 6 (lower is better)
Translates to: SLASGILIGSEDVLH*LAMSMEEKYHGDTG
Trigger: ACCAGTGTCTCCATGGTACTTCTCCTCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 72 bp CAACATCAGGATAGTATGGGTTGCTCTGGTCTCAGCTaGGCCTCTGGCATCCTGATTGGGAGTGAGGATGTG +
Preference number: 6 (lower is better)
Translates to: QHQDSMGCSGLS*ASGILIGSEDV
Trigger: CACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 90 bp TGTGACCACCAACATCAGGATAGTATGGGTTGCTCTGGTCTCAGCTaGGCCTCTGGCATCCTGATTGGGAGTGAGGATGTGCTGCATTTG +
Preference number: 6 (lower is better)
Translates to: CDHQHQDSMGCSGLS*ASGILIGSEDVLHL
Trigger: CAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGTTGGTGGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 72 bp TCTGGCATCCTGATTGGGAGTGAGGATGTGCTGCATTaGCTGGCGATGTCTATGGAGGAGAAGTACCATGGA +
Preference number: 6 (lower is better)
Translates to: SGILIGSEDVLH*LAMSMEEKYHG
Trigger: TCCATGGTACTTCTCCTCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CCA 72 bp CTGGTCCAGACCATGATGGTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAAC +
Preference number: 6 (lower is better)
Translates to: LVQTMMVMNVAS*ENCKKTMPTMN
Trigger: GTTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGACCATCATGGTCTGGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 72 bp AAGACTGGAGAGAAATTATGGACAAACAGAAAGACATaGGCCACAGTTCCAACCCCAAACTGGCAAAGCAAG +
Preference number: 6 (lower is better)
Translates to: KTGEKLWTNRKT*ATVPTPNWQSK
Trigger: CTTGCTTTGCCAGTTTGGGGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 72 bp GTGGAACCGAACAAGTTGCTTTTAGAGTCAGTGTTATaGTCTGTTATCTGTGGACCAGTGACCTTAATTGGA +
Preference number: 6 (lower is better)
Translates to: VEPNKLLLESVL*SVICGPVTLIG
Trigger: TCCAATTAAGGTCACTGGTCCACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTCGGTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 90 bp CATTTGAGTTCATTTGGAGGAGTTTTGGAAGCAAAAGCACTCATGTaGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATTGGCCACA +
Preference number: 6 (lower is better)
Translates to: HLSSFGGVLEAKALM*FGNIVRNRVKALAT
Trigger: TGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGAGTGCTTTTGCTTCCAAAACTCCTCCAAATGAACTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2
CDS CAA 72 bp ATGCCTACAATGAACCCAGAAGTGGAACCGAACAAGTaGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGT +
Preference number: 6 (lower is better)
Translates to: MPTMNPEVEPNK*LLESVLLSVIC
Trigger: ACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTCGGTTCCACTTCTGGGTTCATTGTAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168326.2