Pregenerated sensors for VMN1R151 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093853Ensembl transcript IDs: ENSMUST00000166079.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGATAGTACGGGTTGCTCTGGTCTCAGCTTGGCCTCTGCGGTACTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATGG | + |
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Preference number: 5 (lower is better) Translates to: RIVRVALVSAWPLRY*LGVRMCCIRWRCLW Trigger: CCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGTACCGCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166079.2 |
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| CDS GCA 90 bp | ATAAAAGCTAACAAATGTGACCACCAGCATCAGGATAGTACGGGTTaGTCTGGTCTCAGCTTGGCCTCTGCGGTACTGATTGGGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IKANKCDHQHQDSTG*SGLSLASAVLIGSE Trigger: CTCACTCCCAATCAGTACCGCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCTGATGCTGGTGGTCACATTTGTTAGCTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166079.2 |
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| CDS CCA 90 bp | AACCAGTCAAGACTGGATAGAAATTATGGACAAACAGAAAGACATTaGCCAAGGTCCCAACCCCAAACTGGCAAAGCAAGAGGATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NQSRLDRNYGQTERH*PRSQPQTGKARGSE Trigger: TTCAGATCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTATCCAGTCTTGACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166079.2 |
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| CDS GCA 72 bp | AACAAATGTGACCACCAGCATCAGGATAGTACGGGTTaGTCTGGTCTCAGCTTGGCCTCTGCGGTACTGATT | + |
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Preference number: 6 (lower is better) Translates to: NKCDHQHQDSTG*SGLSLASAVLI Trigger: AATCAGTACCGCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCTGATGCTGGTGGTCACATTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166079.2 |
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