Pregenerated sensors for VMN1R143 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096071

Ensembl transcript IDs: ENSMUST00000171622.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTCAGGACACAGGTGGAACACAAATTTTTGCTTCTTGCCACCATGTaGCTGAAGAATTCTAATTTACATTTGAGTTCATTTGGAGGAGTT	+
Preference number: 5 (lower is better) Translates to: LRTQVEHKFLLLATM*LKNSNLHLSSFGGV Trigger: AACTCCTCCAAATGAACTCAAATGTAAATTAGAATTCTTCAGTCACATGGTGGCAAGAAGCAAAAATTTGTGTTCCACCTGTGTCCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171622.2
CDS CCA 72 bp	AAGCTAACAAATGTGACCACCAGCATCAGGATAGTATaGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCGTCC	+
Preference number: 6 (lower is better) Translates to: KLTNVTTSIRIV*VALVSAWPLAS Trigger: GGACGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171622.2
CDS CCA 72 bp	CTGGTCCAGACCATGATGCTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAAT	+
Preference number: 6 (lower is better) Translates to: LVQTMMLMNVAS*ENCKKTMPTMN Trigger: ATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171622.2
CDS CAA 90 bp	CATTTGAGTTCATTTGGAGGAGTTTTGGGAGCAAAAGCACTCATGTaGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATTGGCCACA	+
Preference number: 6 (lower is better) Translates to: HLSSFGGVLGAKALM*FGNIVRNRVKALAT Trigger: TGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGAGTGCTTTTGCTCCCAAAACTCCTCCAAATGAACTCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171622.2

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