Pregenerated sensors for VMN1R142 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095273Ensembl transcript IDs: ENSMUST00000169697.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGATAGTATGGGTTGCTCTTGTCTCAGCTTGGCCTCTGGCGTCCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATGG | + |
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Preference number: 5 (lower is better) Translates to: RIVWVALVSAWPLAS*LGVRMCCIRWRCLW Trigger: CCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCATACTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169697.2 |
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| CDS TCA 90 bp | CTCAGGACACAGGTGGAACACAAATTTGTGCTTCTTGCCACCATGTaGCTGAAGAATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTQVEHKFVLLATM*LKNSNLHLSSVGGV Trigger: AACTCCTCCAACTGAACTCAAATGTAAATTAGAATTCTTCAGTCACATGGTGGCAAGAAGCACAAATTTGTGTTCCACCTGTGTCCTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169697.2 |
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| CDS TCA 90 bp | CTGAGTATAAGTTTACCTCTATTAACAAGAACAAGAGTGACAAACTaGTGGATACTCAGGACACAGGTGGAACACAAATTTGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSISLPLLTRTRVTN*WILRTQVEHKFVLL Trigger: AAGAAGCACAAATTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCACTCTTGTTCTTGTTAATAGAGGTAAACTTATACTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169697.2 |
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| CDS CCA 72 bp | AAGCTAACAAATGTGACCACCAGCATCAGGATAGTATaGGTTGCTCTTGTCTCAGCTTGGCCTCTGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: KLTNVTTSIRIV*VALVSAWPLAS Trigger: GGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169697.2 |
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