Pregenerated sensors for VMN1R139 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074311

Ensembl transcript IDs: ENSMUST00000169730.2, ENSMUST00000173668.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	CAGCATCAGGATAGTATGGGTTGCTCTGGTCTCAGCTaGGCCTCTGGCATCCTGATTGGGAGTGAGGAGGAG	+
Preference number: 6 (lower is better) Translates to: QHQDSMGCSGLS*ASGILIGSEEE Trigger: CTCCTCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169730.2 ENSMUST00000173668.2
CDS CCA 72 bp	AAGCTAACAAATGTGACCACCAGCATCAGGATAGTATaGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCATCC	+
Preference number: 6 (lower is better) Translates to: KLTNVTTSIRIV*VALVSAWPLAS Trigger: GGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169730.2 ENSMUST00000173668.2
CDS GCA 72 bp	AACAAATGTGACCACCAGCATCAGGATAGTATGGGTTaGTCTGGTCTCAGCTTGGCCTCTGGCATCCTGATT	+
Preference number: 6 (lower is better) Translates to: NKCDHQHQDSMG*SGLSLASGILI Trigger: AATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169730.2 ENSMUST00000173668.2
CDS CAA 72 bp	AAGACTGGAGAGAAATTATGGACAAATAGAAAGACATaGGCCACGGTCCCAACCCCAAACTGGCAAAGCAAG	+
Preference number: 6 (lower is better) Translates to: KTGEKLWTNRKT*ATVPTPNWQSK Trigger: CTTGCTTTGCCAGTTTGGGGTTGGGACCGTGGCCAATGTCTTTCTATTTGTCCATAATTTCTCTCCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169730.2
CDS GCA 72 bp	ACCATGATGCTCATGAATGTGGCATCATGGGAAATCTaGAAGAAGACAATGCCTACAATGAATCCAGAAGTG	+
Preference number: 6 (lower is better) Translates to: TMMLMNVASWEI*KKTMPTMNPEV Trigger: CACTTCTGGATTCATTGTAGGCATTGTCTTCTTGCAGATTTCCCATGATGCCACATTCATGAGCATCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169730.2
CDS CCA 72 bp	TCTATTATCTGTGGACCAGTGACCTTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACTG	+
Preference number: 6 (lower is better) Translates to: SIICGPVTLIGM*MLLKTLKNQQL Trigger: CAGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAAGGTCACTGGTCCACAGATAATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169730.2
CDS GCA 72 bp	ACTGTAGCAAGAATAATTCCACAAATTTGGGACACTTaGTCTGAGTATAAGTTTACCTTTACCTCTATTAAC	+
Preference number: 6 (lower is better) Translates to: TVARIIPQIWDT*SEYKFTFTSIN Trigger: GTTAATAGAGGTAAAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGTGGAATTATTCTTGCTACAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169730.2

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