Pregenerated sensors for VMN1R135 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095064

Ensembl transcript IDs: ENSMUST00000170931.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCGTCCTGATTGGGAGTaGGGATGTGCTGCATTCGCTGGTGATGTCTATGGAGGAGAAGTA	+
Preference number: 5 (lower is better) Translates to: GLLWSQLGLWRPDWE*GCAAFAGDVYGGEV Trigger: TACTTCTCCTCCATAGACATCACCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGACCAGAGCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170931.2
CDS TCA 90 bp	CTCAGGACACAGGTGGAACACAAATTTTTGCTTCTTGCCACCATGTaGCTGAAGAATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTT	+
Preference number: 5 (lower is better) Translates to: LRTQVEHKFLLLATM*LKNSNLHLSSVGGV Trigger: AACTCCTCCAACTGAACTCAAATGTAAATTAGAATTCTTCAGTCACATGGTGGCAAGAAGCAAAAATTTGTGTTCCACCTGTGTCCTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170931.2
CDS CCA 72 bp	GTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTaGCTTAAAATCACCTGTCTGGGCCTCTTTTTAGAA	+
Preference number: 6 (lower is better) Translates to: VRNRVKALATAM*LKITCLGLFLE Trigger: TTCTAAAAAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170931.2
CDS CCA 72 bp	CACCTGTCTGGGCCTCTTTTTAGAACCAGTCATGACTaGAGAGAAATTATGGACAAACAGAAAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGPLFRTSHD*REIMDKQKDIG Trigger: GCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCATGACTGGTTCTAAAAAGAGGCCCAGACAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170931.2
CDS CAA 72 bp	ATGACTGGAGAGAAATTATGGACAAACAGAAAGACATaGGCCACAGTTCCAACCCCAAACTGGCAAAGCAAG	+
Preference number: 6 (lower is better) Translates to: MTGEKLWTNRKT*ATVPTPNWQSK Trigger: CTTGCTTTGCCAGTTTGGGGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170931.2

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