Pregenerated sensors for VMN1R128 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095758

Ensembl transcript IDs: ENSMUST00000169165.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTGGTCCAGACCATGATGGTCATGAATGTGGCATCATGGGAAAACTaGAAGAAGACCATGCCTACAATGAATCCAGAAGTGGAACAGAAC	+
Preference number: 5 (lower is better) Translates to: LVQTMMVMNVASWEN*KKTMPTMNPEVEQN Trigger: GTTCTGTTCCACTTCTGGATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGACCATCATGGTCTGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS CCA 90 bp	ATGGAGACACTGGTCCAGACCATGATGGTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAATCCAGAAGTG	+
Preference number: 5 (lower is better) Translates to: METLVQTMMVMNVAS*ENCKKTMPTMNPEV Trigger: CACTTCTGGATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGACCATCATGGTCTGGACCAGTGTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS CCA 90 bp	TGTCTGGGCCTCTTTTTAGAACCAGTCAAGACTGGAGAGAAATTATaGACAAACAGAAAGACATTGGCCACAGTTCCAACCCCAAACTGG	+
Preference number: 5 (lower is better) Translates to: CLGLFLEPVKTGEKL*TNRKTLATVPTPNW Trigger: CCAGTTTGGGGTTGGAACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAAAAGAGGCCCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS GCA 72 bp	AACAAATGTGACCACCAGCATCAGGATAGTATGGGTTaGTCTTGTCTCAGCTTGGCCTCTGGCGTCCTGATT	+
Preference number: 6 (lower is better) Translates to: NKCDHQHQDSMG*SCLSLASGVLI Trigger: AATCAGGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCATACTATCCTGATGCTGGTGGTCACATTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS CCA 72 bp	CTGGTCCAGACCATGATGGTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAAT	+
Preference number: 6 (lower is better) Translates to: LVQTMMVMNVAS*ENCKKTMPTMN Trigger: ATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGACCATCATGGTCTGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS CCA 72 bp	CACCTGTCTGGGCCTCTTTTTAGAACCAGTCAAGACTaGAGAGAAATTATGGACAAACAGAAAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGPLFRTSQD*REIMDKQKDIG Trigger: GCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAAAAGAGGCCCAGACAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169165.2
CDS TCA 72 bp	CCTTTACCTCTATTAACAGGAACTAGAGTGACAAACTaGTGGATACTCAGGACACAGGTGGAACACAAATTT	+
Preference number: 6 (lower is better) Translates to: PLPLLTGTRVTN*WILRTQVEHKF Trigger: AAATTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCACTCTAGTTCCTGTTAATAGAGGTAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169165.2

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