Pregenerated sensors for VMN1R126 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096813Ensembl transcript IDs: ENSMUST00000168398.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 90 bp | AGCTTGGCCTCTGGCGTCCTGATTGGGAGTGAGGATGTGCTGCATTaGCTGGCGATGTCTATGGAGGAGAAGTACCATGGAGACACTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLASGVLIGSEDVLH*LAMSMEEKYHGDTG Trigger: ACCAGTGTCTCCATGGTACTTCTCCTCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168398.2 |
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| CDS CAA 90 bp | GCCATCATGTTGTTTGGAAATACAGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGGCTTAAAATCACCTGTCTGGGCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AIMLFGNTVRNRVKA*ATAMWLKITCLGLC Trigger: ACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTGTATTTCCAAACAACATGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168398.2 |
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| CDS CAA 90 bp | CATTTGAGTTCAGTTGGAGGATTTCTTGGAGCAAAAGCCATCATGTaGTTTGGAAATACAGTGAGGAATAGAGTCAAGGCATTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLSSVGGFLGAKAIM*FGNTVRNRVKALAT Trigger: TGTGGCCAATGCCTTGACTCTATTCCTCACTGTATTTCCAAACAACATGATGGCTTTTGCTCCAAGAAATCCTCCAACTGAACTCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168398.2 |
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| CDS CAA 90 bp | AATCCAGAAGTGGAACAGAAAAACTTGCTTTTAGAGTCAGTGTTATaGTCTGTTATCTGTGGACCAGTGACCTTAATTGGAATGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: NPEVEQKNLLLESVL*SVICGPVTLIGMWM Trigger: CATCCACATTCCAATTAAGGTCACTGGTCCACAGATAACAGACAATAACACTGACTCTAAAAGCAAGTTTTTCTGTTCCACTTCTGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168398.2 |
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