Pregenerated sensors for VMN1R122 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094001

Ensembl transcript IDs: ENSMUST00000164409.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATAAAAGCTAACAAATGTGAACACCAGCATCAGGATAGTACGGGTTaGTCTGGTCTCAGCTTGGCCTCTGGGGTTCTGATTGGGAGTGAG	+
Preference number: 5 (lower is better) Translates to: IKANKCEHQHQDSTG*SGLSLASGVLIGSE Trigger: CTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCTGATGCTGGTGTTCACATTTGTTAGCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164409.2
CDS TCA 72 bp	CGGGTTGCTCTGGTCTCAGCTTGGCCTCTGGGGTTCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGA	+
Preference number: 6 (lower is better) Translates to: RVALVSAWPLGF*LGVRMCCIRWR Trigger: TCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGACCAGAGCAACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164409.2
CDS CAA 90 bp	TGTGAACACCAGCATCAGGATAGTACGGGTTGCTCTGGTCTCAGCTaGGCCTCTGGGGTTCTGATTGGGAGTGAGGATGTGCTGCATTCG	+
Preference number: 6 (lower is better) Translates to: CEHQHQDSTGCSGLS*ASGVLIGSEDVLHS Trigger: CGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCTGATGCTGGTGTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164409.2
CDS GCA 72 bp	AACAAATGTGAACACCAGCATCAGGATAGTACGGGTTaGTCTGGTCTCAGCTTGGCCTCTGGGGTTCTGATT	+
Preference number: 6 (lower is better) Translates to: NKCEHQHQDSTG*SGLSLASGVLI Trigger: AATCAGAACCCCAGAGGCCAAGCTGAGACCAGAGCAACCCGTACTATCCTGATGCTGGTGTTCACATTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164409.2
CDS GCA 72 bp	GAAGATCAACAGAAAAGGAGAGATACTGGGGAAGACTaGAGCCAGAACCTCACTGACAAGCCTTATGAAGAA	+
Preference number: 6 (lower is better) Translates to: EDQQKRRDTGED*SQNLTDKPYEE Trigger: TTCTTCATAAGGCTTGTCAGTGAGGTTCTGGCTGCAGTCTTCCCCAGTATCTCTCCTTTTCTGTTGATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164409.2

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