Pregenerated sensors for VMN1R116 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095973

Ensembl transcript IDs: ENSMUST00000164288.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTGGTCCAGACCATGATGCTCATGAATGTGGCATCATGGGAAAACTaGAAGAAGACCATGCCTACAATGAATCCAGAAGTGGAACAAAAC	+
Preference number: 5 (lower is better) Translates to: LVQTMMLMNVASWEN*KKTMPTMNPEVEQN Trigger: GTTTTGTTCCACTTCTGGATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS TCA 72 bp	TGGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCGTCCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGA	+
Preference number: 6 (lower is better) Translates to: WVALVSAWPLAS*LGVRMCCIRWR Trigger: TCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGACCAGAGCAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CCA 72 bp	GTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTaGCTTAAAAACACCTGTCTGGGCCTCTGTTTAGAA	+
Preference number: 6 (lower is better) Translates to: VRNRVKALATAM*LKNTCLGLCLE Trigger: TTCTAAACAGAGGCCCAGACAGGTGTTTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CAA 90 bp	GCACTCATGTTGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGGCTTAAAAACACCTGTCTGGGCCTCTGT	+
Preference number: 6 (lower is better) Translates to: ALMLFGNIVRNRVKA*ATAMWLKNTCLGLC Trigger: ACAGAGGCCCAGACAGGTGTTTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CAA 72 bp	TTGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGGCTTAAAAACACCTGTCTG	+
Preference number: 6 (lower is better) Translates to: LFGNIVRNRVKA*ATAMWLKNTCL Trigger: CAGACAGGTGTTTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CAA 90 bp	AAGAAGACCATGCCTACAATGAATCCAGAAGTGGAACAAAACAAGTaGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGTGGACCAGTG	+
Preference number: 6 (lower is better) Translates to: KKTMPTMNPEVEQNK*LLESVLLSVICGPV Trigger: CACTGGTCCACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTTTGTTCCACTTCTGGATTCATTGTAGGCATGGTCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CAA 90 bp	AATCCAGAAGTGGAACAAAACAAGTTGCTTTTAGAGTCAGTGTTATaGTCTGTTATCTGTGGACCAGTGACCTTAATTGGAATGTGGATG	+
Preference number: 6 (lower is better) Translates to: NPEVEQNKLLLESVL*SVICGPVTLIGMWM Trigger: CATCCACATTCCAATTAAGGTCACTGGTCCACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTTTGTTCCACTTCTGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164288.2
CDS CAA 72 bp	GTGGAACAAAACAAGTTGCTTTTAGAGTCAGTGTTATaGTCTGTTATCTGTGGACCAGTGACCTTAATTGGA	+
Preference number: 6 (lower is better) Translates to: VEQNKLLLESVL*SVICGPVTLIG Trigger: TCCAATTAAGGTCACTGGTCCACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTTTGTTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164288.2

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