Pregenerated sensors for VMN1R113 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091638

Ensembl transcript IDs: ENSMUST00000168794.2, ENSMUST00000173723.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTT	+
Preference number: 5 (lower is better) Translates to: LRTQVEHKFVLLATR*LKDSNLHLSSVGGV Trigger: AACTCCTCCAACTGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS TCA 90 bp	GAGGAGTTTTTGGAGCAAAAGCCATCATGTTGTTTGGAAATATTGTaGGGAATAGAGTCAAGGCATTGGCCACAGCCATGTGTCTTAAAA	+
Preference number: 5 (lower is better) Translates to: EEFLEQKPSCCLEIL*GIESRHWPQPCVLK Trigger: TTTTAAGACACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACAATATTTCCAAACAACATGATGGCTTTTGCTCCAAAAACTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS TCA 90 bp	GGGAAGACCGCAGTTAAAATCTCACTGACAAGCCTTACGAAGAAATaGGTATGCATAAAAAGGGCATGTAACATGATACAAATACAATTT	+
Preference number: 5 (lower is better) Translates to: GKTAVKISLTSLTKK*VCIKRACNMIQIQF Trigger: AAATTGTATTTGTATCATGTTACATGCCCTTTTTATGCATACTCATTTCTTCGTAAGGCTTGTCAGTGAGATTTTAACTGCGGTCTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS TCA 72 bp	TGGACTCAGCTTGGCCTCTGGGGTTCTGATTGGGAGTaGGGAGGAGAAGTACCATGGAGACACTGGTCCAGA	+
Preference number: 6 (lower is better) Translates to: WTQLGLWGSDWE*GGEVPWRHWSR Trigger: TCTGGACCAGTGTCTCCATGGTACTTCTCCTCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168794.2
CDS CAA 72 bp	CAGCATCAGGATAGTACGGGTTGCTTTGGACTCAGCTaGGCCTCTGGGGTTCTGATTGGGAGTGAGGAGGAG	+
Preference number: 6 (lower is better) Translates to: QHQDSTGCFGLS*ASGVLIGSEEE Trigger: CTCCTCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCTGATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168794.2
CDS CAA 90 bp	TGTAAACACCAGCATCAGGATAGTACGGGTTGCTTTGGACTCAGCTaGGCCTCTGGGGTTCTGATTGGGAGTGAGGATGTGCTGCATTCG	+
Preference number: 6 (lower is better) Translates to: CKHQHQDSTGCFGLS*ASGVLIGSEDVLHS Trigger: CGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCTGATGCTGGTGTTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173723.2
CDS TCA 72 bp	ACGGTCCCAACCCCAAACTGGCAAAGCAAGAGAATCTaGAGAGCCACTTCCTCAGTGGTTTTCAGGGAGTTA	+
Preference number: 6 (lower is better) Translates to: TVPTPNWQSKRI*RATSSVVFREL Trigger: TAACTCCCTGAAAACCACTGAGGAAGTGGCTCTTCAGATTCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CAA 72 bp	AAGACTGGAGAGAAATTATGGACAAACAGACAGACATaGGCCACGGTCCCAACCCCAAACTGGCAAAGCAAG	+
Preference number: 6 (lower is better) Translates to: KTGEKLWTNRQT*ATVPTPNWQSK Trigger: CTTGCTTTGCCAGTTTGGGGTTGGGACCGTGGCCAATGTCTGTCTGTTTGTCCATAATTTCTCTCCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS GCA 72 bp	ACCATGATGCTCATGAATGTGGCATCGTACGCAAACTaGAAGAAGACAATGCCCACACTGAATCCAGAAGTG	+
Preference number: 6 (lower is better) Translates to: TMMLMNVASYAN*KKTMPTLNPEV Trigger: CACTTCTGGATTCAGTGTGGGCATTGTCTTCTTGCAGTTTGCGTACGATGCCACATTCATGAGCATCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS GCA 72 bp	AACAAATGTAAACACCAGCATCAGGATAGTACGGGTTaGTTTGGACTCAGCTTGGCCTCTGGGGTTCTGATT	+
Preference number: 6 (lower is better) Translates to: NKCKHQHQDSTG*FGLSLASGVLI Trigger: AATCAGAACCCCAGAGGCCAAGCTGAGTCCAAAGCAACCCGTACTATCCTGATGCTGGTGTTTACATTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CCA 72 bp	TTACCTCTATTAACAGGAACCAGAGTGACAAACTGGTaGACACTCAGGACACAGGTGGAACACAAGTTTGTG	+
Preference number: 6 (lower is better) Translates to: LPLLTGTRVTNW*TLRTQVEHKFV Trigger: CACAAACTTGTGTTCCACCTGTGTCCTGAGTGTCCACCAGTTTGTCACTCTGGTTCCTGTTAATAGAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CCA 72 bp	CCTTTACCTCTATTAACAGGAACCAGAGTGACAAACTaGTGGACACTCAGGACACAGGTGGAACACAAGTTT	+
Preference number: 6 (lower is better) Translates to: PLPLLTGTRVTN*WTLRTQVEHKF Trigger: AAACTTGTGTTCCACCTGTGTCCTGAGTGTCCACCAGTTTGTCACTCTGGTTCCTGTTAATAGAGGTAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS TCA 72 bp	CATCGTACGCAAACTGCAAGAAGACAATGCCCACACTaGATCCAGAAGTGGAACAGAACAACTTTCTTTTCG	+
Preference number: 6 (lower is better) Translates to: HRTQTARRQCPH*IQKWNRTTFFS Trigger: CGAAAAGAAAGTTGTTCTGTTCCACTTCTGGATTCAGTGTGGGCATTGTCTTCTTGCAGTTTGCGTACGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CCA 72 bp	CACTTGTCTGGGTCTCTGTTTAGAACCAGTCAAGACTaGAGAGAAATTATGGACAAACAGACAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGSLFRTSQD*REIMDKQTDIG Trigger: GCCAATGTCTGTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGACCCAGACAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CAA 90 bp	GCCATCATGTTGTTTGGAAATATTGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGTCTTAAAATCACTTGTCTGGGTCTCTGT	+
Preference number: 6 (lower is better) Translates to: AIMLFGNIVRNRVKA*ATAMCLKITCLGLC Trigger: ACAGAGACCCAGACAAGTGATTTTAAGACACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACAATATTTCCAAACAACATGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CAA 90 bp	CATTTGAGTTCAGTTGGAGGAGTTTTTGGAGCAAAAGCCATCATGTaGTTTGGAAATATTGTGAGGAATAGAGTCAAGGCATTGGCCACA	+
Preference number: 6 (lower is better) Translates to: HLSSVGGVFGAKAIM*FGNIVRNRVKALAT Trigger: TGTGGCCAATGCCTTGACTCTATTCCTCACAATATTTCCAAACAACATGATGGCTTTTGCTCCAAAAACTCCTCCAACTGAACTCAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CAA 72 bp	TTGTTTGGAAATATTGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGTCTTAAAATCACTTGTCTG	+
Preference number: 6 (lower is better) Translates to: LFGNIVRNRVKA*ATAMCLKITCL Trigger: CAGACAAGTGATTTTAAGACACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACAATATTTCCAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CCA 72 bp	TCTGTTATCTGTGGACCACTGAACTTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACTG	+
Preference number: 6 (lower is better) Translates to: SVICGPLNLIGM*MLLKTLKNQQL Trigger: CAGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAAGTTCAGTGGTCCACAGATAACAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS CCA 72 bp	CTTTCTTTTCGAGTCAGTGTTATTGTCTGTTATCTGTaGACCACTGAACTTAATTGGAATGTGGATGTTACT	+
Preference number: 6 (lower is better) Translates to: LSFRVSVIVCYL*TTELNWNVDVT Trigger: AGTAACATCCACATTCCAATTAAGTTCAGTGGTCCACAGATAACAGACAATAACACTGACTCGAAAAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2
CDS TCA 72 bp	GCAGTTAAAATCTCACTGACAAGCCTTACGAAGAAATaGGTATGCATAAAAAGGGCATGTAACATGATACAA	+
Preference number: 6 (lower is better) Translates to: AVKISLTSLTKK*VCIKRACNMIQ Trigger: TTGTATCATGTTACATGCCCTTTTTATGCATACTCATTTCTTCGTAAGGCTTGTCAGTGAGATTTTAACTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168794.2 ENSMUST00000173723.2

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