Pregenerated sensors for VMN1R112 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094284

Ensembl transcript IDs: ENSMUST00000174538.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TGTCTGGGCCTCTGTTTAGAACCAGTCAAGACTGGAGAGAAATTATaGACAAATAGAAAGACATTGGCCACGGTCCCAACCCCAAACTGG	+
Preference number: 5 (lower is better) Translates to: CLGLCLEPVKTGEKL*TNRKTLATVPTPNW Trigger: CCAGTTTGGGGTTGGGACCGTGGCCAATGTCTTTCTATTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174538.2
CDS CCA 90 bp	AACCAGTCAAGACTGGAGAGAAATTATGGACAAATAGAAAGACATTaGCCACGGTCCCAACCCCAAACTGGCAAAGCAAGAGGATCTGAA	+
Preference number: 5 (lower is better) Translates to: NQSRLERNYGQIERH*PRSQPQTGKARGSE Trigger: TTCAGATCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGTGGCCAATGTCTTTCTATTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174538.2
CDS CAA 90 bp	TGTGACCACCAGCATCAGGATAGTATGGGTTGCTCTGGTCTCAGCTaGGCCTCTGGCATCCTGATTGGGAGTGAGGAGGAGAAGTACCAT	+
Preference number: 6 (lower is better) Translates to: CDHQHQDSMGCSGLS*ASGILIGSEEEKYH Trigger: ATGGTACTTCTCCTCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGCTGGTGGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174538.2

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