Pregenerated sensors for VMN1R111 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095768

Ensembl transcript IDs: ENSMUST00000179511.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	GGAGTGAGGATGTCCTGCATTCGCTGGCAATGTCTATaGAGGAGAAGTATCATGGAGACACTGGTCCAGATC	+
Preference number: 6 (lower is better) Translates to: GVRMSCIRWQCL*RRSIMETLVQI Trigger: GATCTGGACCAGTGTCTCCATGATACTTCTCCTCCATAGACATTGCCAGCGAATGCAGGACATCCTCACTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CCA 72 bp	CATTGGCCACAGCCATGTGGCTTAAAATCACCTGTCTaGGTCTCTGTTTATAACCAGTCAAGACTGGAGAGA	+
Preference number: 6 (lower is better) Translates to: HWPQPCGLKSPV*VSVYNQSRLER Trigger: TCTCTCCAGTCTTGACTGGTTATAAACAGAGACCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CCA 72 bp	CTGGTCCAGATCATGATGCTCATGAATGTGGCATCATaGGCAAACTGCAAGACAATGCCTACAATGAATCCA	+
Preference number: 6 (lower is better) Translates to: LVQIMMLMNVAS*ANCKTMPTMNP Trigger: TGGATTCATTGTAGGCATTGTCTTGCAGTTTGCCCATGATGCCACATTCATGAGCATCATGATCTGGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CCA 72 bp	CACCTGTCTGGGTCTCTGTTTATAACCAGTCAAGACTaGAGAGAAATTATGGACAAACAGAAAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGSLFITSQD*REIMDKQKDIG Trigger: GCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTATAAACAGAGACCCAGACAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CAA 90 bp	TTTGTGCTTCTTGCCACCAGGCGACTGAAGGATTCTAATTTACATTaGAGTTCATTTGGAGGAGTTTTGGGAGCAAAAGCCATCATGTTG	+
Preference number: 6 (lower is better) Translates to: FVLLATRRLKDSNLH*SSFGGVLGAKAIML Trigger: CAACATGATGGCTTTTGCTCCCAAAACTCCTCCAAATGAACTCAAATGTAAATTAGAATCCTTCAGTCGCCTGGTGGCAAGAAGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CCA 72 bp	TCTGTTATCTGTGGACCAGTGACCCTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACTG	+
Preference number: 6 (lower is better) Translates to: SVICGPVTLIGM*MLLKTLKNQQL Trigger: CAGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAGGGTCACTGGTCCACAGATAACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179511.2
CDS CAA 90 bp	GACACTGAAAAACCAACAACTGTAACAAGAATAACTCGCCAAATTTaGGACACTTGCTCTGAGTATAAGTTTACCTTTACCTCTACTAAG	+
Preference number: 6 (lower is better) Translates to: DTEKPTTVTRITRQI*DTCSEYKFTFTSTK Trigger: CTTAGTAGAGGTAAAGGTAAACTTATACTCAGAGCAAGTGTCCAAAATTTGGCGAGTTATTCTTGTTACAGTTGTTGGTTTTTCAGTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179511.2

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