Pregenerated sensors for VMN1R104 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096903

Ensembl transcript IDs: ENSMUST00000169689.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCATCCTGATTGGGAGTaGGGATGTGCTGCATTTGCTGGCGATGTCTATGGAGGAGAAGTA	+
Preference number: 5 (lower is better) Translates to: GLLWSQLGLWHPDWE*GCAAFAGDVYGGEV Trigger: TACTTCTCCTCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS TCA 72 bp	TGGTCTCAGCTTGGCCTCTGGCATCCTGATTGGGAGTaGGGATGTGCTGCATTTGCTGGCGATGTCTATGGA	+
Preference number: 6 (lower is better) Translates to: WSQLGLWHPDWE*GCAAFAGDVYG Trigger: TCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	GGAGTGAGGATGTGCTGCATTTGCTGGCGATGTCTATaGAGGAGAAGTACCATGGAGACACTGGTCCAGACC	+
Preference number: 6 (lower is better) Translates to: GVRMCCICWRCL*RRSTMETLVQT Trigger: GGTCTGGACCAGTGTCTCCATGGTACTTCTCCTCCATAGACATCGCCAGCAAATGCAGCACATCCTCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	GTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTaGCTTAAAATCACCTGTCTGGGCCTCTGTTTAGAA	+
Preference number: 6 (lower is better) Translates to: VRNRVKALATAM*LKITCLGLCLE Trigger: TTCTAAACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	AATCTAACAAATGTGACCACCAACATCAGGATAGTATaGGTTGCTCTGGTCTCAGCTTGGCCTCTGGCATCC	+
Preference number: 6 (lower is better) Translates to: NLTNVTTNIRIV*VALVSAWPLAS Trigger: GGATGCCAGAGGCCAAGCTGAGACCAGAGCAACCCATACTATCCTGATGTTGGTGGTCACATTTGTTAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	CTGGTCCAGACCATGATGCTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACCATGCCTACAATGAAC	+
Preference number: 6 (lower is better) Translates to: LVQTMMLMNVAS*ENCKKTMPTMN Trigger: GTTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS GCA 72 bp	ACCATGATGCTCATGAATGTGGCATCATGGGAAAACTaGAAGAAGACCATGCCTACAATGAACCCAGAAGTG	+
Preference number: 6 (lower is better) Translates to: TMMLMNVASWEN*KKTMPTMNPEV Trigger: CACTTCTGGGTTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	CACCTGTCTGGGCCTCTGTTTAGAACCAGTCAAGACTaGAGAGAAATTATGGACAAACAGAAAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGPLFRTSQD*REIMDKQKDIG Trigger: GCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2
CDS CCA 72 bp	AAACCAACAACTGTAGCAGGAATAATTCCACAAATTTaGGACACTTGCTCTGAGTATAAGTTTACCTTTACC	+
Preference number: 6 (lower is better) Translates to: KPTTVAGIIPQI*DTCSEYKFTFT Trigger: GGTAAAGGTAAACTTATACTCAGAGCAAGTGTCCCAAATTTGTGGAATTATTCCTGCTACAGTTGTTGGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169689.2

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