Pregenerated sensors for VMN1R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091013Ensembl transcript IDs: ENSMUST00000169123.4, ENSMUST00000227586.2, ENSMUST00000227629.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTaGAACTCGGGTCTGCAACTGTGTCCCAAGATTTTGGGCCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: RFGAFMPRFQETEFP*NSGLQLCPKILGLS Trigger: TGACAGGCCCAAAATCTTGGGACACAGTTGCAGACCCGAGTTTCACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR GCA 90 bp | TCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTGAAACTCGGGTCTaGAACTGTGTCCCAAGATTTTGGGCCTGTCATGCAGTCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: SCQGSRRLSSRETRV*NCVPRFWACHAVFT Trigger: AGTGAAGACTGCATGACAGGCCCAAAATCTTGGGACACAGTTGCAGACCCGAGTTTCACGGGAACTCAGTCTCCTGGAACCTTGGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR TCA 90 bp | ATCCCAGCAACTACATGGTGGCTCACAACCATCTGTAATGAGATCTaGTGCCCTCTTCTAGAGTGTCTGTCTGAAAACAGCTATAATGTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNEI*CPLLECLSENSYNV Trigger: TACATTATAGCTGTTTTCAGACAGACACTCTAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCTGCCTAGGACATGGGTaGAGGCCAGGGAGTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: PLGLVKTCTRGILYYNPFCLGHG*RPGSKV Trigger: AACTTTACTCCCTGGCCTTCACCCATGTCCTAGGCA...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCTGCCTAGGACATGGGTaGAGGCCAGGGAGTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSCLGHG*RPGSKV Trigger: AACTTTACTCCCTGGCCTTCACCCATGTCCTAGGCA...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCGTGACTGTCTTCAGATaGACCAAAAGAGGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: PLGLVKTCTRGILYYNPFVTVFR*TKRGHQ Trigger: CTGATGCCCTCTTTTGGTGCATCTGAAGACAGTCAC...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CAA 90 bp | AAAGAAAGCACACAGATCCATTCACTGACTAACGCAGTGACAGGTTaGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: KESTQIHSLTNAVTG*EHSCQGSRRLSSRE Trigger: TTCACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGCGTTAGTCAGTGAATGGATCTGTGTGCTTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCTGTACAGATGGTTGTaGGCCTTCATGTGGTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSLYRWL*AFMWLF Trigger: AAACAACCACATGAAGGCTCACAACCATCTGTACAG...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCACTGGGGCATTTTGTCTaGATAAGTAACATTCTCACG | + |
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Preference number: 2 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSLGHFV*ISNILT Trigger: CGTGAGAATGTTACTTATTCAGACAAAATGCCCCAG...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTCCCAGAGATCATGTATaGTATGCCTTGATTGATTAC | + |
|
Preference number: 2 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRPRDHV*YALIDY Trigger: GTAATCAATCAAGGCATACCATACATGATCTCTGGG...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTTTGTCAAAGGTCAGCTaGGCATGTATGTCTATATTT | + |
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Preference number: 2 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRLSKVS*ACMSIF Trigger: AAATATAGACATACATGCTCAGCTGACCTTTGACAA...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTTTGTCGGCCCTACTCTaGCACAAAGATTTATTTATT | + |
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Preference number: 2 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRLSALL*HKDLFI Trigger: AATAAATAAATCTTTGTGCCAGAGTAGGGCCGACAA...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CAA 90 bp | TGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTTTAGAATaGAATTTAGGACCTCTGCTCTCTCCAGTCAACCCCACTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: CSCTDGCEPSCGCLE*NLGPLLSPVNPTHS Trigger: AGAGTGAGTGGGGTTGACTGGAGAGAGCAGAGGTCCTAAATTCAATTCTAAACAACCACATGAAGGCTCACAACCATCTGTACAGCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCAAGCGTTCTGATATGTaGAATCTGAGTCTGATTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSKRSDM*NLSLIH Trigger: GTGAATCAGACTCAGATTTCACATATCAGAACGCTT...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTGGAAACTTATCCTCATaGCTTTGTTCTGTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: IKAGRRAGEIAQLLRALTGNLSS*LCSVSC Trigger: ACATGAGACAGAACAAAGGCATGAGGATAAGTTTCC...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTCCCAGAGATCATGTATaGTATGCCTTGATTGATTAC | + |
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Preference number: 2 (lower is better) Translates to: IKAGRRAGEIAQLLRALTPRDHV*YALIDY Trigger: GTAATCAATCAAGGCATACCATACATGATCTCTGGG...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCAGGAAGAACTCTCATTaGGGAATAACTTCTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSRKNSH*GITSLP Trigger: AGGAAGAGAAGTTATTCCCCAATGAGAGTTCTTCCT...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTAGGAAGAACTCTCATTaGGGAATAACTTCTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: IKAGRRAGEIAQLLRALTRKNSH*GITSLP Trigger: AGGAAGAGAAGTTATTCCCCAATGAGAGTTCTTCCT...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGGTCCAGTTTGATTACTCTGCCACTGTCCTCTGGACCATTTGTTCAAAACTGTACAGATGGTTGTaGGCCTTCATGTGGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: IRVQFDYSATVLWTICSKLYRWL*AFMWLF Trigger: AAACAACCACATGAAGGCTCACAACCATCTGTACAG...TTTTGAACAAATGGTCCAGAGGACAGTGGCAGAGTAATCAAACTGGACCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAAGTGACTGTCTTCAGATaGACCAAAAGAGGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: TEIGTTLSKISYSQEPGEVTVFR*TKRGHQ Trigger: CTGATGCCCTCTTTTGGTGCATCTGAAGACAGTCAC...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CAA 90 bp | ATTGAATTTAGGACCTCTGCTCTCTCCAGTCAACCCCACTCACTCTaGTCGGCCCTACTCTGGCACAAAGATTTATTTATTATTATACTT | + |
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Preference number: 2 (lower is better) Translates to: IEFRTSALSSQPHSL*SALLWHKDLFIIIL Trigger: AAGTATAATAATAAATAAATCTTTGTGCCAGAGTAGGGCCGACAAGAGTGAGTGGGGTTGACTGGAGAGAGCAGAGGTCCTAAATTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTCTGGACCATTTGTTCAAAATAGTGTCCTTTCCCTGTTGTGTATCTTGTTACTTAAGTACACTGTaGCTGTCTTCAGATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: CPLDHLFKIVSFPCCVSCYLSTL*LSSDAP Trigger: TGGTGCATCTGAAGACAGTCACAGTGTACTTAAGTA...ACAAGATACACAACAGGGAAAGGACACTATTTTGAACAAATGGTCCAGAGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCTGGACCATTTGTTCAAAATAGTGTCCTTTCCCTGTTGTGTATCTTGTGGAAACTTATCCTCATaGCTTTGTTCTGTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: CPLDHLFKIVSFPCCVSCGNLSS*LCSVSC Trigger: ACATGAGACAGAACAAAGGCATGAGGATAAGTTTCC...ACAAGATACACAACAGGGAAAGGACACTATTTTGAACAAATGGTCCAGAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCTGCTAATTTTTAGGTATGAAATAAGGGTCCAGTTTGATTACTCTGCCAAGCGTTCTGATATGTaGAATCTGAGTCTGATTCAC | + |
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Preference number: 2 (lower is better) Translates to: PFLLIFRYEIRVQFDYSAKRSDM*NLSLIH Trigger: GTGAATCAGACTCAGATTTCACATATCAGAACGCTT...GGCAGAGTAATCAAACTGGACCCTTATTTCATACCTAAAAATTAGCAGAAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTACTACAACCCTTTCATGAATAATACTTCAGTTCCTCCTAAAACCACAACCTTGTCAAAGGTCAGCTaGGCATGTATGTCTATATTT | + |
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Preference number: 2 (lower is better) Translates to: LYYNPFMNNTSVPPKTTTLSKVS*ACMSIF Trigger: AAATATAGACATACATGCTCAGCTGACCTTTGACAA...GGTTGTGGTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGGTTGTAGTACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CAA 90 bp | AAATCAGGAAACTTATCCTCATGCCTTTGTTCTGTCTCATGTCTTTaGTTTTGCTCATTGAAGGCCATTTTAGTTCATTTGGACTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: KSGNLSSCLCSVSCL*FCSLKAILVHLDSY Trigger: ATAAGAGTCCAAATGAACTAAAATGGCCTTCAATGAGCAAAACAAAAGACATGAGACAGAACAAAGGCATGAGGATAAGTTTCCTGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTCAACCCCACTCACTCTaGTCGGCCCTACTCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: IKAGRRAGEIAQLLRALTQPHSL*SALLWH Trigger: GTGCCAGAGTAGGGCCGACAAGAGTGAGTGGGGTTG...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR GCA 72 bp | GGTTCCAGGAGACTGAGTTCCCGTGAAACTCGGGTCTaGAACTGTGTCCCAAGATTTTGGGCCTGTCATGCA | + |
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Preference number: 3 (lower is better) Translates to: GSRRLSSRETRV*NCVPRFWACHA Trigger: TGCATGACAGGCCCAAAATCTTGGGACACAGTTGCAGACCCGAGTTTCACGGGAACTCAGTCTCCTGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CCA 72 bp | CGTGAAACTCGGGTCTGCAACTGTGTCCCAAGATTTTaGGCCTGTCATGCAGTCTTCACTGGACTGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RETRVCNCVPRF*ACHAVFTGLGV Trigger: CACACCCAGTCCAGTGAAGACTGCATGACAGGCCCAAAATCTTGGGACACAGTTGCAGACCCGAGTTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR TCA 72 bp | GCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTaGAACTCGGGTCTGCAACTGTGTCCCAAGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: AFMPRFQETEFP*NSGLQLCPKIL Trigger: CAAAATCTTGGGACACAGTTGCAGACCCGAGTTTCACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR GCA 72 bp | CCTGAGATTACTAGCTCCTATCCGGCAACTGTGAGATaGCTGATTGCTGTCAGCACTGGGGCATTTTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: PEITSSYPATVR*LIAVSTGAFCL Trigger: CAGACAAAATGCCCCAGTGCTGACAGCAATCAGGCATCTCACAGTTGCCGGATAGGAGCTAGTAATCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTaGTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDSSAVKSTD*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCCTGTGTCCCAAGATTTaGGGCCTGTCATGCAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PLGLVKTCTRGILYYNPFLCPKI*GLSCSL Trigger: AAGACTGCATGACAGGCCCAAAATCTTGGGACACAG...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR GCA 72 bp | TCACTGACTAACGCAGTGACAGGTTTGGAGCATTCATaGCAAGGTTCCAGGAGACTGAGTTCCCGTGAAACT | + |
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Preference number: 3 (lower is better) Translates to: SLTNAVTGLEHS*QGSRRLSSRET Trigger: AGTTTCACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGCGTTAGTCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR CCA 72 bp | TGTCCCAAGATTTTGGGCCTGTCATGCAGTCTTCACTaGACTGGGTGTGACATAGTGTGCTGTGTTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: CPKILGLSCSLH*TGCDIVCCVFS Trigger: GGAGAAAACACAGCACACTATGTCACACCCAGTCCAGTGAAGACTGCATGACAGGCCCAAAATCTTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAACAACCCCACTCACTCTaGTCGGCCCTACTCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TEIGTTLSKISYSQEPGEQPHSL*SALLWH Trigger: GTGCCAGAGTAGGGCCGACAAGAGTGAGTGGGGTTG...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTCTCATGTCTTTTGTTTaGCTCATTGAAGGCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRLMSFV*LIEGHF Trigger: AAAATGGCCTTCAATGAGCAAAACAAAAGACATGAG...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTTCTGTCTCATGTCTTTaGTTTTGCTCATTGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: IKAGRRAGEIAQLLRALTSVSCL*FCSLKA Trigger: GGCCTTCAATGAGCAAAACAAAAGACATGAGACAGA...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCATGTCCTCTGGACCATTaGTTCAAAATAGTGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSCPLDH*FKIVSF Trigger: AAAGGACACTATTTTGAACAAATGGTCCAGAGGACA...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCTGTGGTTGTTTAGAATaGAATTTAGGACCTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSCGCLE*NLGPLL Trigger: GAGCAGAGGTCCTAAATTCAATTCTAAACAACCACA...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTTGTCCTCTGGACCATTaGTTCAAAATAGTGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: IKAGRRAGEIAQLLRALTCPLDH*FKIVSF Trigger: AAAGGACACTATTTTGAACAAATGGTCCAGAGGACA...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR TCA 72 bp | ACTACATGGTGGCTCACAACCATCTGTAATGAGATCTaGTGCCCTCTTCTAGAGTGTCTGTCTGAAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICNEI*CPLLECLSENS Trigger: GCTGTTTTCAGACAGACACTCTAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR TCA 72 bp | TTTGGGCCTGTCATGCAGTCTTCACTGGACTGGGTGTaGCATAGTGTGCTGTGTTTTCTCCTAGATTATATA | + |
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Preference number: 3 (lower is better) Translates to: FGPVMQSSLDWV*HSVLCFLLDYI Trigger: TATATAATCTAGGAGAAAACACAGCACACTATGTCACACCCAGTCCAGTGAAGACTGCATGACAGGCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTACTACAACCCTTTCATGAATAATACTTCAGTTCCTCCTAAAACCACAACCAACGCAGTGACAGGTTaGGAGCATTCATGCCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LYYNPFMNNTSVPPKTTTNAVTG*EHSCQG Trigger: ACCTTGGCATGAATGCTCCAAACCTGTCACTGCGTT...GGTTGTGGTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGGTTGTAGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| 3UTR TCA 72 bp | CATGCACCAGGGGAATTCTGTACTACAACCCTTTCATaGATAATACTTCAGTTCCTCCTAAAACCACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: HAPGEFCTTTLS*IILQFLLKPQP Trigger: GGGTTGTGGTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGGGTCCAGTTTGATTACTCTGCCACTGTCCTCTGGACCATTTGTTCAAAATGTGGTTGTTTAGAATaGAATTTAGGACCTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRVQFDYSATVLWTICSKCGCLE*NLGPLL Trigger: GAGCAGAGGTCCTAAATTCAATTCTAAACAACCACA...TTTTGAACAAATGGTCCAGAGGACAGTGGCAGAGTAATCAAACTGGACCCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| 3UTR TCA 72 bp | ATTCATGTCTGTAATGAGAATTCTAAGTATACTATTTaGGCCAGCCCTGAGATTACTAGCTCCTATCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHVCNENSKYTI*ASPEITSSYPA Trigger: TGCCGGATAGGAGCTAGTAATCTCAGGGCTGGCTCAAATAGTATACTTAGAATTCTCATTACAGACATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTCCTCTGCTCTGGGGATaGTTTGCGGGAAATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRPLLWG*FAGNAG Trigger: ACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGG...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCAGGGAGAGCAGGAGGATaGTGTTGGCTGAGACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSGRAGG*CWLRPQ Trigger: TTGGGGTCTCAGCCAACACCATCCTCCTGCTCTCCC...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCGGGAGAGCAGGAGGATaGTGTTGGCTGAGACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVKTCTRGILYYNPFGRAGG*CWLRPQ Trigger: TTGGGGTCTCAGCCAACACCATCCTCCTGCTCTCCC...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCTGGAGGACGCTCAGGTaGCATGTGGCACAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVKTCTRGILYYNPFWRTLR*HVAQME Trigger: CTCCATTTGTGCCACATGTCACCTGAGCGTCCTCCA...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTCAGTATGAGAATGTGTaGGGTCACATTGTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKAGRRAGEIAQLLRALTQYENV*GHIVGG Trigger: GCCGCCCACAATGTGACCTCACACATTCTCATACTG...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTAAGCAGCACAAGTTGTaGCAGAGGGAGTTAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRKQHKL*QRELGL Trigger: CAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTT...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGCGTGAACTCATGACCCCTCTGCTCTGGGGATaGTTTGCGGGAAATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDLVMGGCERELMTPLLWG*FAGNAG Trigger: ACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGG...GGTCATGAGTTCACGCTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGACAGGTTTGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGTTCCCGTTACTTGAAAGTACCATaGGCCCTACTAGAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVTGLEHSCQGSRRLSSRYLKVP*ALLERH Trigger: ATGCCTCTCTAGTAGGGCTCATGGTACTTTCAAGTA...ACGGGAACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCACGTGGCATAACCACTaGACACAAACATCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSTWHNH*TQTSGH Trigger: GTGTCCAGATGTTTGTGTCCAGTGGTTATGCCACGT...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCACGTGGCATAACCACTaGACACAAACATCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVKTCTRGILYYNPFTWHNH*TQTSGH Trigger: GTGTCCAGATGTTTGTGTCCAGTGGTTATGCCACGT...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| 3UTR CAA 72 bp | AGGACCTCTGCTCTCTCCAGTCAACCCCACTCACTCTaGTCGGCCCTACTCTGGCACAAAGATTTATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RTSALSSQPHSL*SALLWHKDLFI Trigger: AATAAATAAATCTTTGTGCCAGAGTAGGGCCGACAAGAGTGAGTGGGGTTGACTGGAGAGAGCAGAGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| 3UTR CAA 72 bp | ACACAGATCCATTCACTGACTAACGCAGTGACAGGTTaGGAGCATTCATGCCAAGGTTCCAGGAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQIHSLTNAVTG*EHSCQGSRRLS Trigger: ACTCAGTCTCCTGGAACCTTGGCATGAATGCTCCAAACCTGTCACTGCGTTAGTCAGTGAATGGATCTGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTATGCTTTGCGGGAAATaGTGGTGTTGTGAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IKAGRRAGEIAQLLRALTMLCGK*WCCEGT Trigger: AGTACCTTCACAACACCAGCATTTCCCGCAAAGCAT...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCTCACTGATTTACATGTaGAGTCATCCCAAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVKTCTRGILYYNPFSLIYM*SHPKTP Trigger: AGGGGTTTTGGGATGACTTCACATGTAAATCAGTGA...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCACCATGTATATACTTaGAAGTACCATGAGCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSHHVYT*KYHEPY Trigger: GTAGGGCTCATGGTACTTTCAAGTATATACATGGTG...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTCAGATGCACCAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGAAGCAGCACAAGTTGTaGCAGAGGGAGTTAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQMHQKRASDLVMGGCEKQHKL*QRELGL Trigger: CAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTT...CTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTGGTGCATCTGAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTACTGCCTTTTATGTCTaGACAAGACAGTCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: IKAGRRAGEIAQLLRALTTAFYV*TRQSPC Trigger: ACATGGTGACTGTCTTGTGCAGACATAAAAGGCAGT...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAACGCTCAGGTGACATGTaGCACAAATGGAGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TEIGTTLSKISYSQEPGERSGDM*HKWRHP Trigger: GGGGTGTCTCCATTTGTGCCACATGTCACCTGAGCG...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGGTCCAGTTTGATTACTCTGCCACTGTCCTCTGGACCATTTGTTCAAAACTGGACACAAACATCTaGACACAGCGATGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRVQFDYSATVLWTICSKLDTNI*TQRWVG Trigger: CCCAACCCATCGCTGTGTCCAGATGTTTGTGTCCAG...TTTTGAACAAATGGTCCAGAGGACAGTGGCAGAGTAATCAAACTGGACCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCACATTTCTTATGCCATTaGTATTGTATACTGGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSHFLCH*YCILGR Trigger: ACGACCCAGTATACAATATCAATGGCATAAGAAATG...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGCGTGAACTCATGACCTCACTGATTTACATGTaGAGTCATCCCAAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDLVMGGCERELMTSLIYM*SHPKTP Trigger: AGGGGTTTTGGGATGACTTCACATGTAAATCAGTGA...GGTCATGAGTTCACGCTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCTGGACCATTTGTTCAAAATAGTGTCCTTTCCCTGTTGTGTATCTTGTCAGTATGAGAATGTGTaGGGTCACATTGTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLDHLFKIVSFPCCVSCQYENV*GHIVGG Trigger: GCCGCCCACAATGTGACCTCACACATTCTCATACTG...ACAAGATACACAACAGGGAAAGGACACTATTTTGAACAAATGGTCCAGAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCAGATGCACCAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGTACTTGAAAGTACCATaGGCCCTACTAGAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLQMHQKRASDLVMGGCEYLKVP*ALLERH Trigger: ATGCCTCTCTAGTAGGGCTCATGGTACTTTCAAGTA...CTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTGGTGCATCTGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CCA 90 bp | CTGTACTACAACCCTTTCATGAATAATACTTCAGTTCCTCCTAAAACCACAACCCGCTCAGGTGACATGTaGCACAAATGGAGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYYNPFMNNTSVPPKTTTRSGDM*HKWRHP Trigger: GGGGTGTCTCCATTTGTGCCACATGTCACCTGAGCG...GGTTGTGGTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGGTTGTAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCCATTTCTTATGCCATTaGTATTGTATACTGGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVKTCTRGILYYNPFHFLCH*YCILGR Trigger: ACGACCCAGTATACAATATCAATGGCATAAGAAATG...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCGGCCACAATGGAGTTTaGAAAAACATTAATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSGHNGV*KNINGH Trigger: ATGTCCATTAATGTTTTTTCAAACTCCATTGTGGCC...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAACACCATGTATATACTTaGAAGTACCATGAGCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TEIGTTLSKISYSQEPGEHHVYT*KYHEPY Trigger: GTAGGGCTCATGGTACTTTCAAGTATATACATGGTG...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCTGGACCATTTGTTCAAAATAGTGTCCTTTCCCTGTTGTGTATCTTGTAATCCAGACAGTACGTaGCCAAAAAGAAGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CPLDHLFKIVSFPCCVSCNPDST*PKRSSL Trigger: TAGTGAGCTTCTTTTTGGTCACGTACTGTCTGGATT...ACAAGATACACAACAGGGAAAGGACACTATTTTGAACAAATGGTCCAGAGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAAACTGCCTTTTATGTCTaGACAAGACAGTCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TEIGTTLSKISYSQEPGETAFYV*TRQSPC Trigger: ACATGGTGACTGTCTTGTGCAGACATAAAAGGCAGT...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CTGTACTACAACCCTTTCATGAATAATACTTCAGTTCCTCCTAAAACCACAACCAATCCAGACAGTACGTaGCCAAAAAGAAGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LYYNPFMNNTSVPPKTTTNPDST*PKRSSL Trigger: TAGTGAGCTTCTTTTTGGTCACGTACTGTCTGGATT...GGTTGTGGTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGGTTGTAGTACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR TCA 90 bp | CCATTTCTGCTAATTTTTAGGTATGAAATAAGGGTCCAGTTTGATTACTCTGCCGGCCACAATGGAGTTTaGAAAAACATTAATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLIFRYEIRVQFDYSAGHNGV*KNINGH Trigger: ATGTCCATTAATGTTTTTTCAAACTCCATTGTGGCC...GGCAGAGTAATCAAACTGGACCCTTATTTCATACCTAAAAATTAGCAGAAATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS GCA 90 bp | GAATGTTCCGGACGGCCCTCTGCTCTGGGGATGCTTTGCGGGAAATaGTGGTGTTGTGAAGGTACTGACACTGCCTTTTATGTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ECSGRPSALGMLCGK*WCCEGTDTAFYVCT Trigger: TGTGCAGACATAAAAGGCAGTGTCAGTACCTTCACAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCGTCCGGAACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS CCA 90 bp | TGTTCCGGACGGCCCTCTGCTCTGGGGATGCTTTGCGGGAAATGCTaGTGTTGTGAAGGTACTGACACTGCCTTTTATGTCTGCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSGRPSALGMLCGKC*CCEGTDTAFYVCTR Trigger: TCTTGTGCAGACATAAAAGGCAGTGTCAGTACCTTCACAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCGTCCGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCAGATGCACCAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGAGCAGGAGGATGGTGTaGGCTGAGACCCCAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLQMHQKRASDLVMGGCESRRMV*AETPKT Trigger: TGTCTTTGGGGTCTCAGCCAACACCATCCTCCTGCT...CTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTGGTGCATCTGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCAACACCAATGGTTATGTaGATGGGCTTGTGCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSTPMVM*MGLCLS Trigger: ACTCAGGCACAAGCCCATCAACATAACCATTGGTGT...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCAGAAAGCAGCACAAGTaGTGCCAGAGGGAGTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGLVKTCTRGILYYNPFRKQHK*CQRELG Trigger: ACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCT...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGGCCTAGTGAAAACATGCACCAGGGGAATTCTGTACTACAACCCTTTCACACCAATGGTTATGTaGATGGGCTTGTGCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGLVKTCTRGILYYNPFTPMVM*MGLCLS Trigger: ACTCAGGCACAAGCCCATCAACATAACCATTGGTGT...GAAAGGGTTGTAGTACAGAATTCCCCTGGTGCATGTTTTCACTAGGCCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGCTGGCAGGAGGGCTGGAGAGATAGCTCAGCTGTTAAGAGCACTGACTCAGAGGGAGTTAGGTTaGACCTTTGCCAAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IKAGRRAGEIAQLLRALTQRELG*TFAKQE Trigger: TTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTG...AGTCAGTGCTCTTAACAGCTGAGCTATCTCTCCAGCCCTCCTGCCAGCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCGCATTTCTTATGCCATaGATATTGTATACTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSAFLMP*ILYTGS Trigger: CGACCCAGTATACAATATCAATGGCATAAGAAATGC...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGGGTCCAGTTTGATTACTCTGCCACTGTCCTCTGGACCATTTGTTCAAAAAGAAAGCAGCACAAGTaGTGCCAGAGGGAGTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IRVQFDYSATVLWTICSKRKQHK*CQRELG Trigger: ACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCT...TTTTGAACAAATGGTCCAGAGGACAGTGGCAGAGTAATCAAACTGGACCCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCAACAGTTAATCATACGTaGTTCAGTACTGATGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: DCSSEGPEFKSQQLHGGSTVNHT*FSTDEH Trigger: GTGTTCATCAGTACTGAACAACGTATGATTAACTGT...TGAGCCACCATGTAGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS-3UTR CAA 90 bp | CAAAAGAGGGCATCAGATCTAGTTATGGGTGGTTGTGAGCGTGAACTCATGACCCTTATGCCATTGATATaGTATACTGGGTCGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QKRASDLVMGGCERELMTLMPLI*YTGSFL Trigger: CAGAAACGACCCAGTATACAATATCAATGGCATAAG...GGTCATGAGTTCACGCTCACAACCACCCATAACTAGATCTGATGCCCTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS-3UTR CAA 90 bp | ATAAGGGTCCAGTTTGATTACTCTGCCACTGTCCTCTGGACCATTTGTTCAAAACAGAGGGAGTTAGGTTaGACCTTTGCCAAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: IRVQFDYSATVLWTICSKQRELG*TFAKQE Trigger: TTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTG...TTTTGAACAAATGGTCCAGAGGACAGTGGCAGAGTAATCAAACTGGACCCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS-3UTR CAA 90 bp | AGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCACAGTTAATCATACGTaGTTCAGTACTGATGAACAC | + |
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Preference number: 5 (lower is better) Translates to: SSAVKSTDCSSEGPEFKSTVNHT*FSTDEH Trigger: GTGTTCATCAGTACTGAACAACGTATGATTAACTGT...GGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACAGCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTCTGGACCATTTGTTCAAAATAGTGTCCTTTCCCTGTTGTGTATCTTGTCTTATGCCATTGATATaGTATACTGGGTCGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CPLDHLFKIVSFPCCVSCLMPLI*YTGSFL Trigger: CAGAAACGACCCAGTATACAATATCAATGGCATAAG...ACAAGATACACAACAGGGAAAGGACACTATTTTGAACAAATGGTCCAGAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGATAGGAACAACCCTATCTAAAATCAGCTATTCACAGGAACCAGGTGAAGCATTTCTTATGCCATaGATATTGTATACTGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: TEIGTTLSKISYSQEPGEAFLMP*ILYTGS Trigger: CGACCCAGTATACAATATCAATGGCATAAGAAATGC...TTCACCTGGTTCCTGTGAATAGCTGATTTTAGATAGGGTTGTTCCTATCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS GCA 72 bp | CAACAGAATGTTCCGGACGGCCCTCTGCTCTGGGGATaGTTTGCGGGAAATGCTGGTGTTGTGAAGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: QQNVPDGPLLWG*FAGNAGVVKVL Trigger: CAGTACCTTCACAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCGTCCGGAACATTCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS GCA 72 bp | AAGCTCACTAGCAACAGAATGTTCCGGACGGCCCTCTaGTCTGGGGATGCTTTGCGGGAAATGCTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KLTSNRMFRTAL*SGDALREMLVL Trigger: CAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCGTCCGGAACATTCTGTTGCTAGTGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS GCA 72 bp | GGACGGCCCTCTGCTCTGGGGATGCTTTGCGGGAAATaGTGGTGTTGTGAAGGTACTGACACTGCCTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GRPSALGMLCGK*WCCEGTDTAFY Trigger: ATAAAAGGCAGTGTCAGTACCTTCACAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CCA 72 bp | CGGCCCTCTGCTCTGGGGATGCTTTGCGGGAAATGCTaGTGTTGTGAAGGTACTGACACTGCCTTTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: RPSALGMLCGKC*CCEGTDTAFYV Trigger: GACATAAAAGGCAGTGTCAGTACCTTCACAACACCAGCATTTCCCGCAAAGCATCCCCAGAGCAGAGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS GCA 72 bp | GCACAAGTTGTGCCAGAGGGAGTTAGGTTTGACCTTTaGCAAACAGGAACTTCTGGGGCTGAGGAGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: AQVVPEGVRFDL*QTGTSGAEEDD Trigger: GTCATCCTCCTCAGCCCCAGAAGTTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTGGCACAACTTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CAA 90 bp | CACAGGGAAAGAAAGCAGCACAAGTTGTGCCAGAGGGAGTTAGGTTaGACCTTTGCCAAACAGGAACTTCTGGGGCTGAGGAGGATGACC | + |
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Preference number: 6 (lower is better) Translates to: HRERKQHKLCQRELG*TFAKQELLGLRRMT Trigger: GGTCATCCTCCTCAGCCCCAGAAGTTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCTTTCCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS TCA 72 bp | CCAATGGTTATGTTGATGGGCTTGTGCCTGAGTTCCTaGAAGAATGTGACCACGTGGGAGAGCAGGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PMVMLMGLCLSS*KNVTTWESRRM Trigger: CATCCTCCTGCTCTCCCACGTGGTCACATTCTTTCAGGAACTCAGGCACAAGCCCATCAACATAACCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CCA 72 bp | ACCACTGGACACAAACATCTGGACACAGCGATGGGTTaGGTCATTATTCCACATAACTCTCCAGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TTGHKHLDTAMG*VIIPHNSPGGG Trigger: GCCTCCTCCTGGAGAGTTATGTGGAATAATGACCCAACCCATCGCTGTGTCCAGATGTTTGTGTCCAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CAA 72 bp | AGAAAGCAGCACAAGTTGTGCCAGAGGGAGTTAGGTTaGACCTTTGCCAAACAGGAACTTCTGGGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RKQHKLCQRELG*TFAKQELLGLR Trigger: CCTCAGCCCCAGAAGTTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CAA 72 bp | ATGTGGAAGGCCCACAGGGAAAGAAAGCAGCACAAGTaGTGCCAGAGGGAGTTAGGTTTGACCTTTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: MWKAHRERKQHK*CQRELGLTFAK Trigger: TTTGGCAAAGGTCAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCTTTCCCTGTGGGCCTTCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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| CDS CAA 90 bp | TTAATGGACATGTGGAAGGCCCACAGGGAAAGAAAGCAGCACAAGTaGTGCCAGAGGGAGTTAGGTTTGACCTTTGCCAAACAGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: LMDMWKAHRERKQHK*CQRELGLTFAKQEL Trigger: AAGTTCCTGTTTGGCAAAGGTCAAACCTAACTCCCTCTGGCACAACTTGTGCTGCTTTCTTTCCCTGTGGGCCTTCCACATGTCCATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169123.4 ENSMUST00000227586.2 ENSMUST00000227629.2 |
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