Pregenerated sensors for VMAC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054723Ensembl transcript IDs: ENSMUST00000067931.7, ENSMUST00000164907.3, ENSMUST00000233400.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCAGGGTCAGTCCCCACCATCTCACTGATGCTGGGGTGCCTGTCTaGCTTGGGCTTTGTGTATGCCTGGTGGAGAATGCTCCTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: FRVSPHHLTDAGVPV*LGLCVCLVENAPPR Trigger: TCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGACTGACCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 90 bp | AGCAGGGATCCATGCCACACTCCTGAGACAGCAAGCCTGGCTACCTaGGACCCTGTCCCAAACAGGAAACACCGAGGTTTCAGGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SRDPCHTPETASLAT*DPVPNRKHRGFRVS Trigger: ACTGACCCTGAAACCTCGGTGTTTCCTGTTTGGGACAGGGTCCCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGGATCCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 90 bp | CTGCTTCATAGCCACTGCCTTCCCACTGAAAAGGTGGTCCCAGGATaGGGCTGTGGGTGTTTGCACAAAGCCTGTCATACTAGCACTGGA | + |
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Preference number: 1 (lower is better) Translates to: LLHSHCLPTEKVVPG*GCGCLHKACHTSTG Trigger: TCCAGTGCTAGTATGACAGGCTTTGTGCAAACACCCACAGCCCCATCCTGGGACCACCTTTTCAGTGGGAAGGCAGTGGCTATGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 90 bp | ATGGCTGGAGGCCCTTCTGTTTCGAACACCCCCTACCTTCTATCTTaGTGGCTGCTCAAGGACAATTTCCCTGAGCGCACAGGTCATGGA | + |
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Preference number: 1 (lower is better) Translates to: MAGGPSVSNTPYLLS*WLLKDNFPERTGHG Trigger: TCCATGACCTGTGCGCTCAGGGAAATTGTCCTTGAGCAGCCACCAAGATAGAAGGTAGGGGGTGTTCGAAACAGAAGGGCCTCCAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 90 bp | GACTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTaGGAGAGACCTGAGTGTCAAGGAACTGAGTGTGGAATCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: DFRDAGWKAPPEGGI*ERPECQGTECGIRE Trigger: TTCCCTGATTCCACACTCAGTTCCTTGACACTCAGGTCTCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 90 bp | TGGGGTGCCTGTCTGGCTTGGGCTTTGTGTATGCCTGGTGGAGAATaGTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: WGACLAWALCMPGGE*SSQSYHPYLHLFLK Trigger: TTTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTCCCACACTGAGGGTCCATGTCAGACTCTGGGTAGACTGGATGGCTGGTCCCCACCATCTCACTaGTGCTGGGGTGCCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SVSHTEGPCQTLGRLDGWSPPSH*CWGACL Trigger: CAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGA...CCAGCCATCCAGTCTACCCAGAGTCTGACATGGACCCTCAGTGTGGGAGACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGAGACCTGAGTGTCAAGGAATCCCCACCATCTCACTaGTGCTGGGGTGCCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VGRPLQKGAFERDLSVKESPPSH*CWGACL Trigger: CAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGA...TTCCTTGACACTCAGGTCTCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTCCCACACTGAGGGTCCATGTCAGACTCTGGGTAGACTGGATGGCTGGCCCAGGATGGGGCTGTaGGTGTTTGCACAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SVSHTEGPCQTLGRLDGWPRMGL*VFAQSL Trigger: CAGGCTTTGTGCAAACACCCACAGCCCCATCCTGGG...CCAGCCATCCAGTCTACCCAGAGTCTGACATGGACCCTCAGTGTGGGAGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTCCCACACTGAGGGTCCATGTCAGACTCTGGGTAGACTGGATGGCTGGATCCCCATGGGGCCGTaGCCACAGATTCTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: SVSHTEGPCQTLGRLDGWIPMGP*PQILRS Trigger: AGATCTCAGAATCTGTGGTCACGGCCCCATGGGGAT...CCAGCCATCCAGTCTACCCAGAGTCTGACATGGACCCTCAGTGTGGGAGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR GCA 90 bp | CGCACAGGTCATGGAATTCAACAGACACCACCTCTGGGTGCAAGGGCTTGTGGGCCTAGCAGGGATCCATaGCACACTCCTGAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RTGHGIQQTPPLGARACGPSRDP*HTPETA Trigger: TGCTGTCTCAGGAGTGTGGCATGGATCCCTGCTAGG...CCCACAAGCCCTTGCACCCAGAGGTGGTGTCTGTTGAATTCCATGACCTGTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CAA 90 bp | TGCCTTCCCACTGAAAAGGTGGTCCCAGGATGGGGCTGTGGGTGTTaGCACAAAGCCTGTCATACTAGCACTGGAGATGCTGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CLPTEKVVPGWGCGC*HKACHTSTGDAEAG Trigger: TCCTGCTTCAGCATCTCCAGTGCTAGTATGACAGGCTTTGTGCAAACACCCACAGCCCCATCCTGGGACCACCTTTTCAGTGGGAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR GCA 90 bp | ATGACTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGACCTAGCAGGGATCCATaGCACACTCCTGAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: MTSEMLVGRPLQKGAFERPSRDP*HTPETA Trigger: TGCTGTCTCAGGAGTGTGGCATGGATCCCTGCTAGG...TCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR CCA 90 bp | ATGACTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGAGGTGCCTGTCTGGCTTaGGCTTTGTGTATGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MTSEMLVGRPLQKGAFERGACLA*ALCMPG Trigger: ACCAGGCATACACAAAGCCCAAGCCAGACAGGCACC...TCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR CCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCAGCAAGCCTGGCTACCTaGGACCCTGTCCCAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ATKTSLSLETRKGLIRYPASLAT*DPVPNR Trigger: CCTGTTTGGGACAGGGTCCCAGGTAGCCAGGCTTGC...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCACACAGTACAGGGCAGTaGCCAGCTGGCAGGAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: ATKTSLSLETRKGLIRYPHSTGQ*PAGRND Trigger: GTCATTCCTGCCAGCTGGTCACTGCCCTGTACTGTG...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR CCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCAGCTGGGGTGCCTGTCTaGCTTGGGCTTTGTGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: ATKTSLSLETRKGLIRYPAGVPV*LGLCVC Trigger: GCATACACAAAGCCCAAGCCAGACAGGCACCCCAGC...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCAATCCCCATGGGGCCGTaGCCACAGATTCTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: ATKTSLSLETRKGLIRYPIPMGP*PQILRS Trigger: AGATCTCAGAATCTGTGGTCACGGCCCCATGGGGAT...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR CCA 90 bp | CATCTAGATTCCAAGTACTTGGAAGGAGGATTCAAGGGAAGCCTGGGTTATAGAGGTGCCTGTCTGGCTTaGGCTTTGTGTATGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HLDSKYLEGGFKGSLGYRGACLA*ALCMPG Trigger: ACCAGGCATACACAAAGCCCAAGCCAGACAGGCACC...TCTATAACCCAGGCTTCCCTTGAATCCTCCTTCCAAGTACTTGGAATCTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGCTTGAGCTACATAAAAATTTTAGAGGCCAGCCTGAGCTACATAAGACTATCAGGGAAAGACATTaGGGCACTCTGGGTTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IQLELHKNFRGQPELHKTIRERH*GTLGCG Trigger: ACCACAACCCAGAGTGCCTCAATGTCTTTCCCTGAT...AGTCTTATGTAGCTCAGGCTGGCCTCTAAAATTTTTATGTAGCTCAAGCTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | CCTGTAGTGGGAGCCTGTCAGCCTAGCAGGGATCCATaGCACACTCCTGAGACAGCAAGCCTGGCTACCTGG | + |
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Preference number: 3 (lower is better) Translates to: PVVGACQPSRDP*HTPETASLATW Trigger: CCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGGATCCCTGCTAGGCTGACAGGCTCCCACTACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | ACCAGGAAAGGGCTTATCAGGTATCCAGAAGGCTCCTaGCTAAGGCAGGGCCTCCCGGGCTGTGCTAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TRKGLIRYPEGS*LRQGLPGCARH Trigger: GTGCCTAGCACAGCCCGGGAGGCCCTGCCTTAGCCAGGAGCCTTCTGGATACCTGATAAGCCCTTTCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | TCAGGGTCAGTCCCCACCATCTCACTGATGCTGGGGTaGCTGTCTGGCTTGGGCTTTGTGTATGCCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SGSVPTISLMLG*LSGLGFVYAWW Trigger: CCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGACTGACCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | GCAGGGATCCATGCCACACTCCTGAGACAGCAAGCCTaGCTACCTGGGACCCTGTCCCAAACAGGAAACACC | + |
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Preference number: 3 (lower is better) Translates to: AGIHATLLRQQA*LPGTLSQTGNT Trigger: GGTGTTTCCTGTTTGGGACAGGGTCCCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGGATCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | GATGCTGGGGTGCCTGTCTGGCTTGGGCTTTGTGTATaGCTGGTGGAGAATGCTCCTCCCAGAGTTACCACC | + |
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Preference number: 3 (lower is better) Translates to: DAGVPVWLGLCV*LVENAPPRVTT Trigger: GGTGGTAACTCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | CACAGGTCATGGAATTCAACAGACACCACCTCTGGGTaGAAGGGCTTGTGGGGCCCCTTCCTCTCACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: HRSWNSTDTTSG*KGLWGPFLSLL Trigger: GAGCAGTGAGAGGAAGGGGCCCCACAAGCCCTTGCACCCAGAGGTGGTGTCTGTTGAATTCCATGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | CCATGCCACACTCCTGAGACAGCAAGCCTGGCTACCTaGGACCCTGTCCCAAACAGGAAACACCGAGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: PCHTPETASLAT*DPVPNRKHRGF Trigger: GAAACCTCGGTGTTTCCTGTTTGGGACAGGGTCCCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | AGCGCACAGGTCATGGAATTCAACAGACACCACCTCTaGGTGCAAGGGCTTGTGGGGCCCCTTCCTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: SAQVMEFNRHHL*VQGLVGPLPLT Trigger: AGTGAGAGGAAGGGGCCCCACAAGCCCTTGCACCCAGAGGTGGTGTCTGTTGAATTCCATGACCTGTGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | CCTCTGTCTCCCACACTGAGGGTCCATGTCAGACTCTaGGTAGACTGGATGGCTGGAGGCCCTTCTGTTTCG | + |
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Preference number: 3 (lower is better) Translates to: PLSPTLRVHVRL*VDWMAGGPSVS Trigger: CGAAACAGAAGGGCCTCCAGCCATCCAGTCTACCCAGAGTCTGACATGGACCCTCAGTGTGGGAGACAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | GGGTGCCTGTCTGGCTTGGGCTTTGTGTATGCCTGGTaGAGAATGCTCCTCCCAGAGTTACCACCCTTACCT | + |
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Preference number: 3 (lower is better) Translates to: GCLSGLGFVYAW*RMLLPELPPLP Trigger: AGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | CTGGGGTGCCTGTCTGGCTTGGGCTTTGTGTATGCCTaGTGGAGAATGCTCCTCCCAGAGTTACCACCCTTA | + |
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Preference number: 3 (lower is better) Translates to: LGCLSGLGFVYA*WRMLLPELPPL Trigger: TAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | AGTCCCCACCATCTCACTGATGCTGGGGTGCCTGTCTaGCTTGGGCTTTGTGTATGCCTGGTGGAGAATGCT | + |
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Preference number: 3 (lower is better) Translates to: SPHHLTDAGVPV*LGLCVCLVENA Trigger: AGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | CCCTGCTTCATAGCCACTGCCTTCCCACTGAAAAGGTaGTCCCAGGATGGGGCTGTGGGTGTTTGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: PCFIATAFPLKR*SQDGAVGVCTK Trigger: CTTTGTGCAAACACCCACAGCCCCATCCTGGGACCACCTTTTCAGTGGGAAGGCAGTGGCTATGAAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | GATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTaGGAGAGACCTGAGTGTCAAGGAACTGAGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: DAGWKAPPEGGI*ERPECQGTECG Trigger: TCCACACTCAGTTCCTTGACACTCAGGTCTCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | CAATCACAGTACAGGGCAGTGACCAGCTGGCAGGAATaGCTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: QSQYRAVTSWQE*LQRCWLEGPSR Trigger: TCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTCATTCCTGCCAGCTGGTCACTGCCCTGTACTGTGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | AGCCACTGCCTTCCCACTGAAAAGGTGGTCCCAGGATaGGGCTGTGGGTGTTTGCACAAAGCCTGTCATACT | + |
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Preference number: 3 (lower is better) Translates to: SHCLPTEKVVPG*GCGCLHKACHT Trigger: AGTATGACAGGCTTTGTGCAAACACCCACAGCCCCATCCTGGGACCACCTTTTCAGTGGGAAGGCAGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | AGAAAGGTAGGGAGTGCTCCCATCAGCAGGGCACGGTaGCTCACATCTAGATTCCAAGTACTTGGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RKVGSAPISRAR*LTSRFQVLGRR Trigger: CCTCCTTCCAAGTACTTGGAATCTAGATGTGAGCCACCGTGCCCTGCTGATGGGAGCACTCCCTACCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | GGCCCTTCTGTTTCGAACACCCCCTACCTTCTATCTTaGTGGCTGCTCAAGGACAATTTCCCTGAGCGCACA | + |
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Preference number: 3 (lower is better) Translates to: GPSVSNTPYLLS*WLLKDNFPERT Trigger: TGTGCGCTCAGGGAAATTGTCCTTGAGCAGCCACCAAGATAGAAGGTAGGGGGTGTTCGAAACAGAAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | CTGTTTCGAACACCCCCTACCTTCTATCTTGGTGGCTaGTCAAGGACAATTTCCCTGAGCGCACAGGTCATG | + |
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Preference number: 3 (lower is better) Translates to: LFRTPPTFYLGG*SRTISLSAQVM Trigger: CATGACCTGTGCGCTCAGGGAAATTGTCCTTGAGCAGCCACCAAGATAGAAGGTAGGGGGTGTTCGAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | CCTTCTATCTTGGTGGCTGCTCAAGGACAATTTCCCTaGGCGCACAGGTCATGGAATTCAACAGACACCACC | + |
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Preference number: 3 (lower is better) Translates to: PSILVAAQGQFP*AHRSWNSTDTT Trigger: GGTGGTGTCTGTTGAATTCCATGACCTGTGCGCTCAGGGAAATTGTCCTTGAGCAGCCACCAAGATAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR GCA 72 bp | TGTCTGGCTTGGGCTTTGTGTATGCCTGGTGGAGAATaGTCCTCCCAGAGTTACCACCCTTACCTTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: CLAWALCMPGGE*SSQSYHPYLHL Trigger: CAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | GTCTTGGCATTAAGGATGGTTCAGGAGGCACAAGAGTaGGTAGAAAGAAAGGTAGGGAGTGCTCCCATCAGC | + |
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Preference number: 3 (lower is better) Translates to: VLALRMVQEAQE*VERKVGSAPIS Trigger: GCTGATGGGAGCACTCCCTACCTTTCTTTCTACTCACTCTTGTGCCTCCTGAACCATCCTTAATGCCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | TGTCAAGGAACTGAGTGTGGAATCAGGGAAAGACATTaGGGCACTCTGGGTTGTGGTGTCTCAACCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: CQGTECGIRERH*GTLGCGVSTHL Trigger: CAAGTGGGTTGAGACACCACAACCCAGAGTGCCTCAATGTCTTTCCCTGATTCCACACTCAGTTCCTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | TGGAATCAGGGAAAGACATTGAGGCACTCTGGGTTGTaGTGTCTCAACCCACTTGTTCTTCCTAGAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: WNQGKTLRHSGL*CLNPLVLPRRV Trigger: TACCCTTCTAGGAAGAACAAGTGGGTTGAGACACCACAACCCAGAGTGCCTCAATGTCTTTCCCTGATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | AGAAAAACTAGACCAAACAATCACAGTACAGGGCAGTaGCCAGCTGGCAGGAATGACTTCAGAGATGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: RKTRPNNHSTGQ*PAGRNDFRDAG Trigger: ACCAGCATCTCTGAAGTCATTCCTGCCAGCTGGTCACTGCCCTGTACTGTGATTGTTTGGTCTAGTTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR CCA 72 bp | CAAAAAGGCGTCTTGCTACAAAAACATCATTGTCCCTaGAAACCAGGAAAGGGCTTATCAGGTATCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: QKGVLLQKHHCP*KPGKGLSGIQK Trigger: CTTCTGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| 3UTR TCA 72 bp | GGGGGTTTAAATGAGATCTTGAGTTTTCACTTGTTGTaGTGTTTAGATGGGATCCGGGTAATGTCTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: GGLNEILSFHLL*CLDGIRVMSQD Trigger: GTCTTGAGACATTACCCGGATCCCATCTAAACATCACAACAAGTGAAAACTCAAGATCTCATTTAAACCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS-3UTR GCA 90 bp | AAAAAGACAAACTCCCCACAGGCAGGGCCTGTAGTGGGAGCCTGTCAGCCTAGCCCTCTCCAGCTCCGCTaGGCGTCGGTGCACGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKTNSPQAGPVVGACQPSPLQLR*ASVHGG Trigger: GCCGCCGTGCACCGACGCGCAGCGGAGCTGGAGAGG...GCTAGGCTGACAGGCTCCCACTACAGGCCCTGCCTGTGGGGAGTTTGTCTTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGTCCCCACCATCTCACTGATGCTGGGGTGCCTGTCTGGCTTGGGCTTGCCAGGGGTGGTCGGTaGCGAGTGATGTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSPHHLTDAGVPVWLGLARGGR*RVMSCS Trigger: GCTGCAGGACATCACTCGCCACCGACCACCCCTGGC...AAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGACTGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | AGGGTCAGTCCCCACCATCTCACTGATGCTGGGGTGCCTGTCTGGCTTGGGCTTTGGCGAGTGATGTCCTaGAGCAGGTCAGCCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSPHHLTDAGVPVWLGLWRVMS*SRSARG Trigger: GCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCA...AAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGGGACTGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTGCCTGTCTGGCTTGGGCTTTGTGTATGCCTGGTGGAGAATGCTCCTCGGGGCCCAGTTCCTCTaGCTCCTCCAGGGTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSGLGFVYAWWRMLLGAQFL*LLQGGQ Trigger: TTGGCCACCCTGGAGGAGGCAGAGGAACTGGGCCCC...GAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | CGCACAGGTCATGGAATTCAACAGACACCACCTCTGGGTGCAAGGGCTTGTGGGGTCCCTCTGGTCCACTaGGGCCTGCAGGCTGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGHGIQQTPPLGARACGVPLVH*GLQAAN Trigger: GTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGAC...CCCACAAGCCCTTGCACCCAGAGGTGGTGTCTGTTGAATTCCATGACCTGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGATGGGCCCTATGGCTGTaGCTGGCCGGCAAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTSEMLVGRPLQKGAFERWALWL*LAGKGP Trigger: GGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCA...TCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | ATCCATGCCACACTCCTGAGACAGCAAGCCTGGCTACCTGGGACCCTGTCCCAAAGTAGCTGGGCCCTATaGCTGTGGCTGGCCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHATLLRQQAWLPGTLSQSSWAL*LWLAGK Trigger: CTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACT...TTGGGACAGGGTCCCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTGCCTGTCTGGCTTGGGCTTTGTGTATGCCTGGTGGAGAATGCTCCTCAGTAGCTGGGCCCTATaGCTGTGGCTGGCCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSGLGFVYAWWRMLLSSWAL*LWLAGK Trigger: CTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACT...GAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGAGACCTGAGTGTCAAGGAAGCCAGGGGTGGTCGGTaGCGAGTGATGTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRPLQKGAFERDLSVKEARGGR*RVMSCS Trigger: GCTGCAGGACATCACTCGCCACCGACCACCCCTGGC...TTCCTTGACACTCAGGTCTCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACAAACTCCCCACAGGCAGGGCCTGTAGTGGGAGCCTGTCAGCCTAGCATATCTCCCGGTCCTTaGCGCGACCCAGCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKTNSPQAGPVVGACQPSISPGP*RDPAHP Trigger: TGGATGAGCTGGGTCGCGCCAAGGACCGGGAGATAT...GCTAGGCTGACAGGCTCCCACTACAGGCCCTGCCTGTGGGGAGTTTGTCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| 3UTR CAA 72 bp | CCCACCATCTCACTGATGCTGGGGTGCCTGTCTGGCTaGGGCTTTGTGTATGCCTGGTGGAGAATGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTISLMLGCLSG*GFVYAWWRMLL Trigger: GAGGAGCATTCTCCACCAGGCATACACAAAGCCCAAGCCAGACAGGCACCCCAGCATCAGTGAGATGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | TGGTGGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAAGGGCGGCGCGCAGGTaGTGGTCGTGGCAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WWRMLLPELPPLPSFVFERAARR*WSWQAR Trigger: CCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCT...TTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCAGAGATGCTGGTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGATCGTCCTGGTCGTCCTaGCCCTCCTCCTTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MTSEMLVGRPLQKGAFERSSWSS*PSSFPM Trigger: CATGGGAAAGGAGGAGGGCCAGGACGACCAGGACGA...TCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAACCAGCATCTCTGAAGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAACTATGCACGGCGGCCAGGTaGGCGTTCGCCTCCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GECSSQSYHPYLHLFLKLCTAAR*AFASRI Trigger: GATCCGGGAGGCGAACGCGCACCTGGCCGCCGTGCA...TAGTTTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | ATCCAGCTTGAGCTACATAAAAATTTTAGAGGCCAGCCTGAGCTACATAAGACTCGCAGGTGCTGGTCGTaGCAGGCCAGGCGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQLELHKNFRGQPELHKTRRCWS*QARRSA Trigger: GGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCG...AGTCTTATGTAGCTCAGGCTGGCCTCTAAAATTTTTATGTAGCTCAAGCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | CATCTAGATTCCAAGTACTTGGAAGGAGGATTCAAGGGAAGCCTGGGTTATAGACTGCCTCCTCCAGGGTaGCCAACAGTGCGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLDSKYLEGGFKGSLGYRLPPPG*PTVRPG Trigger: CCCTGGCCGCACTGTTGGCCACCCTGGAGGAGGCAG...TCTATAACCCAGGCTTCCCTTGAATCCTCCTTCCAAGTACTTGGAATCTAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAACTGCCTCCTCCAGGGTaGCCAACAGTGCGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WWRMLLPELPPLPSFVFELPPPG*PTVRPG Trigger: CCCTGGCCGCACTGTTGGCCACCCTGGAGGAGGCAG...TTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAACTATGGGCCCTATGGCTGTaGCTGGCCGGCAAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GECSSQSYHPYLHLFLKLWALWL*LAGKGP Trigger: GGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCA...TAGTTTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCATGGTCCACTGCGGCCTaGAGGCTGCGAACTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATKTSLSLETRKGLIRYPWSTAA*RLRTVA Trigger: GGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCA...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR GCA 90 bp | GGTATCAAAAAGGCGTCTTGCTACAAAAACATCATTGTCCCTGGAAACCAGGAAGGGGCCCAGTTCCTCTaGCTCCTCCAGGGTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GIKKASCYKNIIVPGNQEGAQFL*LLQGGQ Trigger: TTGGCCACCCTGGAGGAGGCAGAGGAACTGGGCCCC...TTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTGATACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR GCA 90 bp | GGTATCAAAAAGGCGTCTTGCTACAAAAACATCATTGTCCCTGGAAACCAGGAATGGCGAGTGATGTCCTaGAGCAGGTCAGCCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIKKASCYKNIIVPGNQEWRVMS*SRSARG Trigger: GCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCA...TTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTGATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAGCAGGCTGCGAACTGTaGCCTCAGAGCTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WWRMLLPELPPLPSFVFEAGCEL*PQSSAA Trigger: AGCTGCTGAGCTCTGAGGCCACAGTTCGCAGCCTGC...TTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | GCTACAAAAACATCATTGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTATCCAAGCTGCTGGATCATCTaGTCCCTCTGGTCCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATKTSLSLETRKGLIRYPSCWII*SLWSTA Trigger: CGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCT...TGGATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CCA 90 bp | GGAGAATGCTCCTCCCAGAGTTACCACCCTTACCTTCATTTGTTTTTGAAACTATCGTCCTGGTCGTCCTaGCCCTCCTCCTTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GECSSQSYHPYLHLFLKLSSWSS*PSSFPM Trigger: CATGGGAAAGGAGGAGGGCCAGGACGACCAGGACGA...TAGTTTCAAAAACAAATGAAGGTAAGGGTGGTAACTCTGGGAGGAGCATTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| 3UTR CAA 72 bp | GTGTGGAATCAGGGAAAGACATTGAGGCACTCTGGGTaGTGGTGTCTCAACCCACTTGTTCTTCCTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWNQGKTLRHSG*WCLNPLVLPRR Trigger: CCTTCTAGGAAGAACAAGTGGGTTGAGACACCACAACCCAGAGTGCCTCAATGTCTTTCCCTGATTCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS-3UTR CCA 90 bp | GGTATCAAAAAGGCGTCTTGCTACAAAAACATCATTGTCCCTGGAAACCAGGAACTCAGCAGCTGCTCTTaGAGGGCAGATATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKKASCYKNIIVPGNQELSSCS*RADISR Trigger: CCGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAG...TTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTGATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| 3UTR CAA 72 bp | AGGGTATCAAAAAGGCGTCTTGCTACAAAAACATCATaGTCCCTGGAAACCAGGAAAGGGCTTATCAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RVSKRRLATKTS*SLETRKGLIRY Trigger: ATACCTGATAAGCCCTTTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTGATACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS GCA 90 bp | AGGGCGGCGCGCAGGTGCTGGTCGTGGCAGGCCAGGCGCTCGGCCTaGGCACCAATCGTGCGCTCAGCCGCCAGCAGCCGCCTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAARRCWSWQARRSA*APIVRSAASSRLSS Trigger: GCTGGAGAGGCGGCTGCTGGCGGCTGAGCGCACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | CGGTCCTTGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTGCTaGTCGTGGCAGGCCAGGCGCTCGGCCTGCGCACCAATCGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLARPSSSRAARRC*SWQARRSACAPIVR Trigger: GCGCACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS GCA 90 bp | TCCCGGTCCTTGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTaGTGGTCGTGGCAGGCCAGGCGCTCGGCCTGCGCACCAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSLARPSSSRAARR*WSWQARRSACAPIV Trigger: CACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCGGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | TTGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTGCTGGTCGTaGCAGGCCAGGCGCTCGGCCTGCGCACCAATCGTGCGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LARPSSSRAARRCWS*QARRSACAPIVRSA Trigger: GGCTGAGCGCACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS TCA 90 bp | CCTCCAGGGTGGCCAACAGTGCGGCCAGGGGTGGTCGGTGGCGAGTaGTGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PPGWPTVRPGVVGGE*CPAAGQPEAVAAGS Trigger: TGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCACCGACCACCCCTGGCCGCACTGTTGGCCACCCTGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 ENSMUST00000233400.2 |
||
| CDS CCA 90 bp | CAGAGCTCAGCAGCTGCTCTTGGAGGGCAGATATCTCCCGGTCCTTaGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTGCTGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QSSAAALGGQISPGP*RDPAHPGRRAGAGR Trigger: ACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGCTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | CCCATGTTGTTGCCCAGGGGTGGGCCAGGCCCATCAGGAAGTAGCTaGGCCCTATGGCTGTGGCTGGCCGGCAAGGGGCCCAGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PMLLPRGGPGPSGSS*ALWLWLAGKGPSSS Trigger: AGAGGAACTGGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACTTCCTGATGGGCCTGGCCCACCCCTGGGCAACAACATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS GCA 90 bp | ACTGCGGCCTGCAGGCTGCGAACTGTGGCCTCAGAGCTCAGCAGCTaGTCTTGGAGGGCAGATATCTCCCGGTCCTTGGCGCGACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAACRLRTVASELSS*SWRADISRSLARPS Trigger: GCTGGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGCTCTGAGGCCACAGTTCGCAGCCTGCAGGCCGCAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS GCA 90 bp | CGGTGGCGAGTGATGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTaGTGGATCATCTGGTCCCTCTGGTCCACTGCGGCCTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RWRVMSCSRSARGCS*WIIWSLWSTAACRL Trigger: CAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS GCA 90 bp | GTGGCCAACAGTGCGGCCAGGGGTGGTCGGTGGCGAGTGATGTCCTaGAGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATCATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VANSAARGGRWRVMS*SRSARGCSCWIIWS Trigger: GGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCACCGACCACCCCTGGCCGCACTGTTGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | ACCGTGGTCCCAAACACAGCAGGCTGCTGGTCGTCCTGGTCGTCCTaGCCCTCCTCCTTTCCCATGTTGTTGCCCAGGGGTGGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVVPNTAGCWSSWSS*PSSFPMLLPRGGPG Trigger: GCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGAGGAGGGCCAGGACGACCAGGACGACCAGCAGCCTGCTGTGTTTGGGACCACGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
||
| CDS GCA 90 bp | GCTGCTGGATCATCTGGTCCCTCTGGTCCACTGCGGCCTGCAGGCTaGGAACTGTGGCCTCAGAGCTCAGCAGCTGCTCTTGGAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGSSGPSGPLRPAG*ELWPQSSAAALGGQ Trigger: CTGCCCTCCAAGAGCAGCTGCTGAGCTCTGAGGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | AGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATCATCTGGTCCCTCTaGTCCACTGCGGCCTGCAGGCTGCGAACTGTGGCCTCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSARGCSCWIIWSL*STAACRLRTVASEL Trigger: GAGCTCTGAGGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | ATGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATCATCTaGTCCCTCTGGTCCACTGCGGCCTGCAGGCTGCGAACTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MSCSRSARGCSCWII*SLWSTAACRLRTVA Trigger: GGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | TGGCGAGTGATGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTGCTaGATCATCTGGTCCCTCTGGTCCACTGCGGCCTGCAGGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WRVMSCSRSARGCSC*IIWSLWSTAACRLR Trigger: TCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS GCA 90 bp | GGCTGTAGCTGCTGGATCATCTGGTCCCTCTGGTCCACTGCGGCCTaGAGGCTGCGAACTGTGGCCTCAGAGCTCAGCAGCTGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCSCWIIWSLWSTAA*RLRTVASELSSCSW Trigger: CCAAGAGCAGCTGCTGAGCTCTGAGGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS CCA 90 bp | TCATCTGGTCCCTCTGGTCCACTGCGGCCTGCAGGCTGCGAACTGTaGCCTCAGAGCTCAGCAGCTGCTCTTGGAGGGCAGATATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGPSGPLRPAGCEL*PQSSAAALGGQISP Trigger: GGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGCTCTGAGGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CAA 90 bp | ATCCATGCCACACTCCTGAGACAGCAAGCCTGGCTACCTGGGACCCTGTCCCAAGATATCTCCCGGTCCTaGGCGCGACCCAGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: IHATLLRQQAWLPGTLSQDISRS*ARPSSS Trigger: GGATGAGCTGGGTCGCGCCAAGGACCGGGAGATATC...TTGGGACAGGGTCCCAGGTAGCCAGGCTTGCTGTCTCAGGAGTGTGGCATGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
||
| CDS-3UTR CAA 90 bp | CGCACAGGTCATGGAATTCAACAGACACCACCTCTGGGTGCAAGGGCTTGTGGGTCCTTTCCCATGTTGTaGCCCAGGGGTGGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RTGHGIQQTPPLGARACGSFPML*PRGGPG Trigger: GCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGA...CCCACAAGCCCTTGCACCCAGAGGTGGTGTCTGTTGAATTCCATGACCTGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS-3UTR CAA 90 bp | GTTGGAAGGCCCCTCCAGAAGGGGGCATTTGAGAGAGACCTGAGTGTCAAGGAATCCTTTCCCATGTTGTaGCCCAGGGGTGGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VGRPLQKGAFERDLSVKESFPML*PRGGPG Trigger: GCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGA...TTCCTTGACACTCAGGTCTCTCTCAAATGCCCCCTTCTGGAGGGGCCTTCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS-3UTR CAA 90 bp | GGTATCAAAAAGGCGTCTTGCTACAAAAACATCATTGTCCCTGGAAACCAGGAAGCTCAGCAGCTGCTCTaGGAGGGCAGATATCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: GIKKASCYKNIIVPGNQEAQQLL*EGRYLP Trigger: CGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGC...TTCCTGGTTTCCAGGGACAATGATGTTTTTGTAGCAAGACGCCTTTTTGATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | GCCAGCAGCCGCCTCTCCAGCTCCGCTGCGCGTCGGTaGACGGCGGCCAGGTGCGCGTTCGCCTCCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: ASSRLSSSAARR*TAARCAFASRI Trigger: GATCCGGGAGGCGAACGCGCACCTGGCCGCCGTGCACCGACGCGCAGCGGAGCTGGAGAGGCGGCTGCTGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CCA 72 bp | GCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTGCTaGTCGTGGCAGGCCAGGCGCTCGGCCTGCGCACCA | + |
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Preference number: 6 (lower is better) Translates to: ARPSSSRAARRC*SWQARRSACAP Trigger: TGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | TCCAGCTCCGCTGCGCGTCGGTGCACGGCGGCCAGGTaGGCGTTCGCCTCCCGGATCTGCAGAGGTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSSAARRCTAAR*AFASRICRGGG Trigger: GCCGCCACCTCTGCAGATCCGGGAGGCGAACGCGCACCTGGCCGCCGTGCACCGACGCGCAGCGGAGCTGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | CGCAGGTGCTGGTCGTGGCAGGCCAGGCGCTCGGCCTaGGCACCAATCGTGCGCTCAGCCGCCAGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRCWSWQARRSA*APIVRSAASSR Trigger: GCGGCTGCTGGCGGCTGAGCGCACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCG 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | TTGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTaGTGGTCGTGGCAGGCCAGGCGCTCGGCCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: LARPSSSRAARR*WSWQARRSACA Trigger: TGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CCA 72 bp | CCCAGCTCATCCAGGGCGGCGCGCAGGTGCTGGTCGTaGCAGGCCAGGCGCTCGGCCTGCGCACCAATCGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSRAARRCWS*QARRSACAPIV Trigger: CACGATTGGTGCGCAGGCCGAGCGCCTGGCCTGCCACGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | ATGGCTGTGGCTGGCCGGCAAGGGGCCCAGTTCCTCTaGCTCCTCCAGGGTGGCCAACAGTGCGGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: MAVAGRQGAQFL*LLQGGQQCGQG Trigger: CCCCTGGCCGCACTGTTGGCCACCCTGGAGGAGGCAGAGGAACTGGGCCCCTTGCCGGCCAGCCACAGCCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CCA 72 bp | TTGCCCAGGGGTGGGCCAGGCCCATCAGGAAGTAGCTaGGCCCTATGGCTGTGGCTGGCCGGCAAGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LPRGGPGPSGSS*ALWLWLAGKGP Trigger: GGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACTTCCTGATGGGCCTGGCCCACCCCTGGGCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CCA 72 bp | GCAGCTGCTCTTGGAGGGCAGATATCTCCCGGTCCTTaGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AAALGGQISPGP*RDPAHPGRRAG Trigger: ACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CCA 72 bp | CCAGGCCCATCAGGAAGTAGCTGGGCCCTATGGCTGTaGCTGGCCGGCAAGGGGCCCAGTTCCTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGPSGSSWALWL*LAGKGPSSSAS Trigger: GGAGGCAGAGGAACTGGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACTTCCTGATGGGCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CCA 72 bp | GGTGGGCCAGGCCCATCAGGAAGTAGCTGGGCCCTATaGCTGTGGCTGGCCGGCAAGGGGCCCAGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGPGPSGSSWAL*LWLAGKGPSSS Trigger: AGAGGAACTGGGCCCCTTGCCGGCCAGCCACAGCCATAGGGCCCAGCTACTTCCTGATGGGCCTGGCCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CAA 72 bp | AGCAGCTGCTCTTGGAGGGCAGATATCTCCCGGTCCTaGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSCSWRADISRS*ARPSSSRAARR Trigger: CCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CAA 90 bp | TCAGAGCTCAGCAGCTGCTCTTGGAGGGCAGATATCTCCCGGTCCTaGGCGCGACCCAGCTCATCCAGGGCGGCGCGCAGGTGCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SELSSCSWRADISRS*ARPSSSRAARRCWS Trigger: CGACCAGCACCTGCGCGCCGCCCTGGATGAGCTGGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGCTCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS TCA 72 bp | TGGCCAACAGTGCGGCCAGGGGTGGTCGGTGGCGAGTaGTGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: WPTVRPGVVGGE*CPAAGQPEAVA Trigger: AGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCACCGACCACCCCTGGCCGCACTGTTGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 ENSMUST00000233400.2 |
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| CDS GCA 72 bp | AGTGCGGCCAGGGGTGGTCGGTGGCGAGTGATGTCCTaGAGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SAARGGRWRVMS*SRSARGCSCWI Trigger: GATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCACTCGCCACCGACCACCCCTGGCCGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 ENSMUST00000233400.2 |
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| CDS CCA 72 bp | GCCCGAGGCTGTAGCTGCTGGATCATCTGGTCCCTCTaGTCCACTGCGGCCTGCAGGCTGCGAACTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARGCSCWIIWSL*STAACRLRTVA Trigger: GGCCACAGTTCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CCA 72 bp | AGCAGGTCAGCCCGAGGCTGTAGCTGCTGGATCATCTaGTCCCTCTGGTCCACTGCGGCCTGCAGGCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: SRSARGCSCWII*SLWSTAACRLR Trigger: TCGCAGCCTGCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | GTGATGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTaGTGGATCATCTGGTCCCTCTGGTCCACTGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VMSCSRSARGCS*WIIWSLWSTAA Trigger: GGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACATCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS GCA 72 bp | CCTGGTCGTCCTGGCCCTCCTCCTTTCCCATGTTGTTaGCCAGGGGTGGGCCAGGCCCATCAGGAAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGRPGPPPFPCC*PGVGQAHQEVA Trigger: AGCTACTTCCTGATGGGCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGAGGAGGGCCAGGACGACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CCA 72 bp | CTGCGAACTGTGGCCTCAGAGCTCAGCAGCTGCTCTTaGAGGGCAGATATCTCCCGGTCCTTGGCGCGACCC | + |
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Preference number: 6 (lower is better) Translates to: LRTVASELSSCS*RADISRSLARP Trigger: GGGTCGCGCCAAGGACCGGGAGATATCTGCCCTCCAAGAGCAGCTGCTGAGCTCTGAGGCCACAGTTCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CCA 72 bp | ATGTCCTGCAGCAGGTCAGCCCGAGGCTGTAGCTGCTaGATCATCTGGTCCCTCTGGTCCACTGCGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: MSCSRSARGCSC*IIWSLWSTAAC Trigger: GCAGGCCGCAGTGGACCAGAGGGACCAGATGATCCAGCAGCTACAGCCTCGGGCTGACCTGCTGCAGGACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067931.7 |
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| CDS CAA 72 bp | TCCTGGTCGTCCTGGCCCTCCTCCTTTCCCATGTTGTaGCCCAGGGGTGGGCCAGGCCCATCAGGAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SWSSWPSSFPML*PRGGPGPSGSS Trigger: GCTACTTCCTGATGGGCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGAGGAGGGCCAGGACGACCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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| CDS CAA 72 bp | TCGTCCTGGTCGTCCTGGCCCTCCTCCTTTCCCATGTaGTTGCCCAGGGGTGGGCCAGGCCCATCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSWSSWPSSFPM*LPRGGPGPSGS Trigger: ACTTCCTGATGGGCCTGGCCCACCCCTGGGCAACAACATGGGAAAGGAGGAGGGCCAGGACGACCAGGACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067931.7 ENSMUST00000164907.3 |
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