Pregenerated sensors for VKORC1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066735Ensembl transcript IDs: ENSMUST00000051758.11, ENSMUST00000201855.2, ENSMUST00000202298.4, ENSMUST00000202486.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTAGAACTCAGAAATCCACCTGCCTCTGCTCCCCAAGTACTGAGTaGGACTCAAGGTGTGTGTCACCAGGCCCAGCCAAACCCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: PRTQKSTCLCSPSTE*DSRCVSPGPAKPCF Trigger: GAAGCAGGGTTTGGCTGGGCCTGGTGACACACACCTTGAGTCTCACTCAGTACTTGGGGAGCAGAGGCAGGTGGATTTCTGAGTTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TTCCTCTCTGAGTGGGAGATGGAAGGGAATCAACCACCCTGTTTCTaGTGTCAACACTGCACCAGGGCTGTCAGCGCATTTCCCAAGATG | + |
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Preference number: 1 (lower is better) Translates to: FLSEWEMEGNQPPCF*CQHCTRAVSAFPKM Trigger: CATCTTGGGAAATGCGCTGACAGCCCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCACTCAGAGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TGGGAGATGGAAGGGAATCAACCACCCTGTTTCTGCTGTCAACACTaGACCAGGGCTGTCAGCGCATTTCCCAAGATGTTCTGTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: WEMEGNQPPCFCCQH*TRAVSAFPKMFCLP Trigger: AGGCAAACAGAACATCTTGGGAAATGCGCTGACAGCCCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR CCA 90 bp | CTTGAGCTGGGTGTTCAGACTGTTTCTTCCTCTCTGAGTGGGAGATaGAAGGGAATCAACCACCCTGTTTCTGCTGTCAACACTGCACCA | + |
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Preference number: 1 (lower is better) Translates to: LELGVQTVSSSLSGR*KGINHPVSAVNTAP Trigger: TGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCACTCAGAGAGGAAGAAACAGTCTGAACACCCAGCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | CAAGTGATGGGACTGCAGGCAAGCATGAGCACACTGTTCGGCAAATaGTGTTATTTCCAACAGCACCTGTTAACGCTCAGTGAGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: QVMGLQASMSTLFGK*CYFQQHLLTLSEKG Trigger: CCCTTTCTCACTGAGCGTTAACAGGTGCTGTTGGAAATAACAGCATTTGCCGAACAGTGTGCTCATGCTTGCCTGCAGTCCCATCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | GGAAGCCTTGAGGGGTCTGGTGGAGGGAACCCTCTCACATTTTCTTaGGTAAGGGTTGGAGACATCTGCAATGTCAAGACAAGCTTTAAC | + |
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Preference number: 1 (lower is better) Translates to: GSLEGSGGGNPLTFS*VRVGDICNVKTSFN Trigger: GTTAAAGCTTGTCTTGACATTGCAGATGTCTCCAACCCTTACTCAAGAAAATGTGAGAGGGTTCCCTCCACCAGACCCCTCAAGGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | GGAGCACACCTAGCCAGACTTTCTCTTCCTCCCGAAAATCTGAAGTaGGGCTTCCACTGTTATGAATCACTTCGAAAGCATGAAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GAHLARLSLPPENLK*GFHCYESLRKHEAQ Trigger: CTGGGCTTCATGCTTTCGAAGTGATTCATAACAGTGGAAGCCTCACTTCAGATTTTCGGGAGGAAGAGAAAGTCTGGCTAGGTGTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | AAGGCAGGAGGAATGTCAAGTTTGAAGCCAGCCTGGGCTATGTACTaGGCTCTAGGACAGCCTAGGCTACAGAGAAAGATTATCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: KAGGMSSLKPAWAMY*ALGQPRLQRKIICL Trigger: GAGACAGATAATCTTTCTCTGTAGCCTAGGCTGTCCTAGAGCTCAGTACATAGCCCAGGCTGGCTTCAAACTTGACATTCCTCCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | ACATCCTGTAGAGTTCCAATCCATCCAGTTCTGACTAGTCAGACTTaGGCTGGGTGTTCAGACTGTTTCTTCCTCTCTGAGTGGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: TSCRVPIHPVLTSQT*AGCSDCFFLSEWEM Trigger: CATCTCCCACTCAGAGAGGAAGAAACAGTCTGAACACCCAGCTCAAGTCTGACTAGTCAGAACTGGATGGATTGGAACTCTACAGGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR CCA 90 bp | ATCACCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTaGGACAAAGCTTCCATGTTTCTCTTCCAGGTCTTTCTACGTTTG | + |
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Preference number: 1 (lower is better) Translates to: ITSGFLLTASVWLLE*DKASMFLFQVFLRL Trigger: CAAACGTAGAAAGACCTGGAAGAGAAACATGGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR CCA 90 bp | CTTAGATCACCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTaGAGTGGGACAAAGCTTCCATGTTTCTCTTCCAGGTCTTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: LRSPLGFFSLLLCGY*SGTKLPCFSSRSFY Trigger: GTAGAAAGACCTGGAAGAGAAACATGGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGATCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TTTAACATCTCCTGTAAGATGCTAACCAGAGAAACACAGTCGCCATaGCACTGGGGTGTGTACTTAGATCACCTCTGGGTTTCTTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: FNISCKMLTRETQSP*HWGVYLDHLWVSSH Trigger: GTGAGAAGAAACCCAGAGGTGATCTAAGTACACACCCCAGTGGCATGGCGACTGTGTTTCTCTGGTTAGCATCTTACAGGAGATGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TCAGCACTTGGTAAAGTGAAGTCACCTAGTGAGGACTTGTCAAAATaGAGATTTTGCTTCAGTGGGCTGGCAGTGAGGCTAAGACTGCAT | + |
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Preference number: 1 (lower is better) Translates to: SALGKVKSPSEDLSK*RFCFSGLAVRLRLH Trigger: ATGCAGTCTTAGCCTCACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTCACTAGGTGACTTCACTTTACCAAGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR TCA 90 bp | AGGGAGGGCCTGATCACATTGCCTGGATTCCTACCCTGTTCTTTATaGCAAGGTTGTTCTCACAAAATAGGATTCATACACATACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: REGLITLPGFLPCSL*QGCSHKIGFIHILP Trigger: AGGCAGTATGTGTATGAATCCTATTTTGTGAGAACAACCTTGTCATAAAGAACAGGGTAGGAATCCAGGCAATGTGATCAGGCCCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TCAAGTTCTCTGCTTCGTGGTAAGGAAGGGAAGGAGGGATACTTCTaGCCCAGTTCTACCCACAGAATGATTTGGTTTGAGATTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSSLLRGKEGKEGYF*PSSTHRMIWFEILR Trigger: TCTTAAAATCTCAAACCAAATCATTCTGTGGGTAGAACTGGGGCAGAAGTATCCCTCCTTCCCTTCCTTACCACGAAGCAGAGAACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | TTCCACTGTTATGAATCACTTCGAAAGCATGAAGCCCAGAATTACTaGAGGAATCATTTTCCCCCTGGTCTGCCCTTCCGTATTTATTGT | + |
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Preference number: 1 (lower is better) Translates to: FHCYESLRKHEAQNY*RNHFPPGLPFRIYC Trigger: ACAATAAATACGGAAGGGCAGACCAGGGGGAAAATGATTCCTGCAGTAATTCTGGGCTTCATGCTTTCGAAGTGATTCATAACAGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | GCTTCCATGTTTCTCTTCCAGGTCTTTCTACGTTTGTGTTTCTTCTaGGTCAGCAAACAGTTTCTCCCGATAGTCCTAAGGTTTACAAAT | + |
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Preference number: 1 (lower is better) Translates to: ASMFLFQVFLRLCFF*VSKQFLPIVLRFTN Trigger: ATTTGTAAACCTTAGGACTATCGGGAGAAACTGTTTGCTGACTCAGAAGAAACACAAACGTAGAAAGACCTGGAAGAGAAACATGGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR GCA 90 bp | AGCATGAAGCCCAGAATTACTGCAGGAATCATTTTCCCCCTGGTCTaGCCTTCCGTATTTATTGTTAAATCAACTAGCAGTGTTATTATT | + |
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Preference number: 1 (lower is better) Translates to: SMKPRITAGIIFPLV*PSVFIVKSTSSVII Trigger: AATAATAACACTGCTAGTTGATTTAACAATAAATACGGAAGGGCAGACCAGGGGGAAAATGATTCCTGCAGTAATTCTGGGCTTCATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR TCA 90 bp | CAGGCCCAGCCAAACCCTGCTTCTTCAGTGTTTAAATACTCTGTCTaGAACAGTCATAACAATATTAGCAGTTTTATAACACAGTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: QAQPNPASSVFKYSV*NSHNNISSFITQCF Trigger: AAAACACTGTGTTATAAAACTGCTAATATTGTTATGACTGTTTCAGACAGAGTATTTAAACACTGAAGAAGCAGGGTTTGGCTGGGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR CCA 90 bp | ACACAACCTTTGATGAAATTGGAATTAAGCGGTCTTTTAAGGAACTaGTTAGAGCCTCCTAAAGGAACATTACAATTCCCATTTTATACC | + |
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Preference number: 1 (lower is better) Translates to: TQPLMKLELSGLLRN*LEPPKGTLQFPFYT Trigger: GGTATAAAATGGGAATTGTAATGTTCCTTTAGGAGGCTCTAACCAGTTCCTTAAAAGACCGCTTAATTCCAATTTCATCAAAGGTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGACCAGAGCTGCAACTaGGCTGGCTGTCATGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: AHHRHNGGGHEDQSCNCADQSCN*AGCHAK Trigger: CTTGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTC...AGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202298.4 ENSMUST00000202486.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTCAATGGAGGAGGTCATaGGGACCAGAGCTGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: AHHRHNGGGHEDQSCNCAQWRRS*GPELQL Trigger: CAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTG...AGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202298.4 ENSMUST00000202486.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGGAAACACTATGGACCGACCTCAGAGCACTTGGCTTGTGCCTGCTTCAGCAACCACCCTGTTTCTaGTGTCAACACTGCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: EGETLWTDLRALGLCLLQQPPCF*CQHCTR Trigger: CCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTG...CTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCGGTCCATAGTGTTTCCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCAGTCTTCCTTAGGCTaGAGCTGTCGCTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SPLGFFSLLLCGYWSGTKQSSLG*SCRFQA Trigger: GGCCTGGAAGCGACAGCTGCAGCCTAAGGAAGACTG...CTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCGCCATGCCACTGGGGTGTGTACTTAGATCACCTCTGGGTTTCTTCTCACCGACCTCAGAGCACTTaGCTTGTGCCTGCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QSPCHWGVYLDHLWVSSHRPQST*LVPASV Trigger: GACTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCG...GTGAGAAGAAACCCAGAGGTGATCTAAGTACACACCCCAGTGGCATGGCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGCTGTCATGCCAAGTAATACAGAAGAACAGGGGTaGGACATTCCAGGTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: EEVMRTRAATALAVMPSNTEEQG*DIPGQH Trigger: GTGCTGACCTGGAATGTCCCACCCCTGTTCTTCTGT...ATTACTTGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGCTGGACACAGGGCTATaGGATGAGCTCACTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: WKKSGKFTAPNKFLDRTVLDTGL*DELTVQ Trigger: CTGTACAGTGAGCTCATCTCATAGCCCTGTGTCCAG...CACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGGGGGAGGAATGTCAAGTTTaGAGCCAGCCTGGGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: KKSGKFTAPNKFLDRTVGEECQV*SQPGLC Trigger: ACATAGCCCAGGCTGGCTTCAAACTTGACATTCCTC...CCCCACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGCAGATTGCCCCTGAATaGACTTCTGGTCTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: WKKSGKFTAPNKFLDRTVQIAPE*TSGLPA Trigger: GGCAGGAAGACCAGAAGTTCATTCAGGGGCAATCTG...CACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGCTGTTCAAAATGCAGATTTTaGTTCAGTGGGCTGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HRHNGGGHEDQSCNCAGCSKCRF*FSGLAV Trigger: CACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGA...ACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAAGGGGGAAGGGAGGGCCTGATCACATTGCCTGGATTCCTACCCTGTTCCTGTTTCTTCCTCTCTaGGTGGGAGATGGAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FKRGKGGPDHIAWIPTLFLFLPL*VGDGRE Trigger: TTCCCTTCCATCTCCCACTCAGAGAGGAAGAAACAG...GAACAGGGTAGGAATCCAGGCAATGTGATCAGGCCCTCCCTTCCCCCTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGCTGTCATGCCAAGTAATAACCAGCACTTGGTAAAGTaGAGTCACCTAGTGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: EVMRTRAATALAVMPSNNQHLVK*SHLVRT Trigger: AGTCCTCACTAGGTGACTTCACTTTACCAAGTGCTG...GTTATTACTTGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR-3UTR TCA 90 bp | CACCTCTCCTGGGCCAATCGGTTTAAAAGGGGGAAGGGAGGGCCTGATCACATTCCCGAAAATCTGAAGTaGGGCTTCCACTGTTATGAA | + |
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Preference number: 2 (lower is better) Translates to: HLSWANRFKRGKGGPDHIPENLK*GFHCYE Trigger: TTCATAACAGTGGAAGCCTCACTTCAGATTTTCGGG...AATGTGATCAGGCCCTCCCTTCCCCCTTTTAAACCGATTGGCCCAGGAGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATGGCCTTCAGGAGCCATaGGAGGGGGTCAGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FTDILLTFKVRSPTTCQYGLQEP*EGVRSP Trigger: TGGGGATCTGACCCCCTCTCATGGCTCCTGAAGGCC...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAAGGGGGAAGGGAGGGCCTGATCACATTGCCTGGATTCCTACCCTGTTCGAAACACAGTCGCCATaGCACTGGGGTGTGTACTTA | + |
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Preference number: 2 (lower is better) Translates to: FKRGKGGPDHIAWIPTLFETQSP*HWGVYL Trigger: TAAGTACACACCCCAGTGGCATGGCGACTGTGTTTC...GAACAGGGTAGGAATCCAGGCAATGTGATCAGGCCCTCCCTTCCCCCTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAAGAGCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCCTGCGCTGGCTGTCATaGCAAGTAATAACTGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: VQRAHHRHNGGGHEDQSCLRWLS*QVITVV Trigger: TACTACAGTTATTACTTGGCATGACAGCCAGCGCAG...GCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGCTCTTTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202298.4 ENSMUST00000202486.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGCTGTCGAGGACTTGTCAAAATaGAGATTTTGCTTCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TDTMEEVMRTRAATALAVEDLSK*RFCFSG Trigger: CCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTC...GACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGGAAACACTATGGACCGACCTCAGAGCACTTGGCTTGTGCCTGCTTCAGACTTTAGTTGAGGACTaGGGGCTAGGGCTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: EGETLWTDLRALGLCLLQTLVED*GLGLHF Trigger: AAAATGTAGCCCTAGCCCCCAGTCCTCAACTAAAGT...CTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCGGTCCATAGTGTTTCCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACCAACCACCCTGTTTCTaGTGTCAACACTGCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: FPFYTCPRPEILWCISFDQPPCF*CQHCTR Trigger: CCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTG...GTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACAAGCCTACTCAGATAGACAGAAGAACAGGGGTGGGACATTCCAGGTCACAGATTTTGCTTCAGTaGGCTGGCAGTGAGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LDKPTQIDRRTGVGHSRSQILLQ*AGSEAK Trigger: CTTAGCCTCACTGCCAGCCCACTGAAGCAAAATCTG...TGACCTGGAATGTCCCACCCCTGTTCTTCTGTCTATCTGAGTAGGCTTGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
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| 3UTR-3UTR TCA 90 bp | GACCGACCTCAGAGCACTTGGCTTGTGCCTGCTTCAGTCATAATACTGCTGAGCGTTAAAGCTTGTCTTTaGTTGGCTCGGTGTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: DRPQSTWLVPASVIILLSVKACL*LARCIL Trigger: AAGGATACACCGAGCCAATCAAAGACAAGCTTTAAC...GCTCAGCAGTATTATGACTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCGCCATGCCACTGGGGTGTGTACTTAGATCACCTCTGGGTTTCTTCTCACTCAGTCACGATGAGCTaGCAATTCCTTTCTACACTT | + |
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Preference number: 2 (lower is better) Translates to: QSPCHWGVYLDHLWVSSHSVTMS*QFLSTL Trigger: AAGTGTAGAAAGGAATTGTCAGCTCATCGTGACTGA...GTGAGAAGAAACCCAGAGGTGATCTAAGTACACACCCCAGTGGCATGGCGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGGGGCGTTTGTGTTTCTTCTaGGTCAGCAAACAGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KKSGKFTAPNKFLDRTVGRLCFF*VSKQFL Trigger: GAGAAACTGTTTGCTGACTCAGAAGAAACACAAACG...CCCCACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTATACACCATATGCATGCAGGGCCTTCAGGAGCCATGAGAGGGGGTCACCACAACAAAAGAGCTaGAGGAGAGGCTATACAGAT | + |
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Preference number: 2 (lower is better) Translates to: YVYTPYACRAFRSHERGSPQQKS*RRGYTD Trigger: ATCTGTATAGCCTCTCCTTCAGCTCTTTTGTTGTGG...TGACCCCCTCTCATGGCTCCTGAAGGCCCTGCATGCATATGGTGTATAGACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACCTTCTGTGTGGCTACTaGAGTGGGACAAAGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FPFYTCPRPEILWCISFDLLCGY*SGTKLP Trigger: TGGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAG...GTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGGCAAGCATGAGCACACTGTTCGGCAAATGCTGTTATTTCCAACAGCACAAAGGTCTAGTCACGTaGCATCCTGTAGAGTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LQASMSTLFGKCCYFQQHKGLVT*HPVEFQ Trigger: TTGGAACTCTACAGGATGTCACGTGACTAGACCTTT...GTGCTGTTGGAAATAACAGCATTTGCCGAACAGTGTGCTCATGCTTGCCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAAGGTGTGTGTCACCAGGCCCAGCCAAACCCTGCTTCTTCAGTGTTTAAATAAAGGTCTAGTCACGTaGCATCCTGTAGAGTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LKVCVTRPSQTLLLQCLNKGLVT*HPVEFQ Trigger: TTGGAACTCTACAGGATGTCACGTGACTAGACCTTT...ATTTAAACACTGAAGAAGCAGGGTTTGGCTGGGCCTGGTGACACACACCTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGGCAAGCATGAGCACACTGTTCGGCAAATGCTGTTATTTCCAACAGCACCCTCTCACATTTTCTTaGGTAAGGGTTGGAGACATC | + |
|
Preference number: 2 (lower is better) Translates to: LQASMSTLFGKCCYFQQHPLTFS*VRVGDI Trigger: GATGTCTCCAACCCTTACTCAAGAAAATGTGAGAGG...GTGCTGTTGGAAATAACAGCATTTGCCGAACAGTGTGCTCATGCTTGCCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACTGGGTTTCTTCTCACTaGTTCTGTGTGGCTACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FPFYTCPRPEILWCISFDWVSSH*FCVATG Trigger: TCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCA...GTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGAGGGTTGGAGACATCTaGAATGTCAAGACAAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: WKKSGKFTAPNKFLDRTVRVGDI*NVKTSF Trigger: AAAGCTTGTCTTGACATTGCAGATGTCTCCAACCCT...CACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATCAGTCTTCCTTAGGCTGCAGCTGTCGCTTCCAGGCCTCATTCAAATAAACCTGCGCTGGCTGTCATaGCAAGTAATAACTGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: PSVFLRLQLSLPGLIQINLRWLS*QVITVV Trigger: TACTACAGTTATTACTTGGCATGACAGCCAGCGCAG...GTTTATTTGAATGAGGCCTGGAAGCGACAGCTGCAGCCTAAGGAAGACTGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGGGGTGTGGGTGTTTTGCCTaGATATATGTCTATACACCA | + |
|
Preference number: 2 (lower is better) Translates to: KKSGKFTAPNKFLDRTVGCGCFA*IYVYTP Trigger: TGGTGTATAGACATATATGCAGGCAAAACACCCACA...CCCCACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACTGAAAGTCGTAAATTCTTCCTCTCTGAGTaGGAGATGGAAGGGAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: PAPGQKSYGASVSTESRKFFLSE*EMEGNQ Trigger: TTGATTCCCTTCCATCTCCCACTCAGAGAGGAAGAA...TTTACGACTTTCAGTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTCTGCTGAGTGATAGAAGACAGAAAAGGTCATTTGGAAATGGGGCCCAACTTCTGTGTGGCTACTaGAGTGGGACAAAGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STLLSDRRQKRSFGNGAQLLCGY*SGTKLP Trigger: TGGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAG...TTGGGCCCCATTTCCAAATGACCTTTTCTGTCTTCTATCACTCAGCAGAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATCTGCCTTGGGAGACCTaGACACAGGGCTATGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: FTDILLTFKVRSPTTCQYLPWET*TQGYEM Trigger: CATCTCATAGCCCTGTGTCCAGGTCTCCCAAGGCAG...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCTTCCATCAGTTTAAGATTCTaGGGGAAAGTGTCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGFLLTASVWLLEWDKASISLRF*GKVSVV Trigger: CACAACAGACACTTTCCCTCAGAATCTTAAACTGAT...GGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACACTTTAGTTGAGGACTaGGGGCTAGGGCTACATTTT | + |
|
Preference number: 2 (lower is better) Translates to: FPFYTCPRPEILWCISFDTLVED*GLGLHF Trigger: AAAATGTAGCCCTAGCCCCCAGTCCTCAACTAAAGT...GTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTCGACTGAAAGTCGTAAATACTTAGATCACCTCTaGGTTTCTTCTCACTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PAPGQKSYGASVSTESRKYLDHL*VSSHCF Trigger: GAAGCAGTGAGAAGAAACCCAGAGGTGATCTAAGTA...TTTACGACTTTCAGTCGAAACTGATGCACCATAGGATTTCTGGCCTGGGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGGCAAGCATGAGCACACTGTTCGGCAAATGCTGTTATTTCCAACAGCACATCAGTTTAAGATTCTaGGGGAAAGTGTCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQASMSTLFGKCCYFQQHISLRF*GKVSVV Trigger: CACAACAGACACTTTCCCTCAGAATCTTAAACTGAT...GTGCTGTTGGAAATAACAGCATTTGCCGAACAGTGTGCTCATGCTTGCCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACCCTCCCTGACAAAACTAGCTGTGGGAAAGGATCAAGGGAAATCCCATAAGAGGGAACACATGTGTTaGGAGCTCAGCTACTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LPSLTKLAVGKDQGKSHKREHMC*ELSYCL Trigger: TAAACAGTAGCTGAGCTCTCAACACATGTGTTCCCT...CTTATGGGATTTCCCTTGATCCTTTCCCACAGCTAGTTTTGTCAGGGAGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAATTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTATAATACTGCTGAGCTaGCTGGCACTGGAATCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YNSHFIPAPGQKSYGASVIILLS*LALESR Trigger: CCTTGATTCCAGTGCCAGTCAGCTCAGCAGTATTAT...AACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAATTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAATGGTGGTACTCCCAAGACTTAGGAAAGCAAAGGGAAGCCTTGAGGGGTCTTTAACTCCACTCTGCTaGGTGATAGAAGACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VMVVLPRLRKAKGSLEGSLTPLC*VIEDRK Trigger: TTTTCTGTCTTCTATCACTCAGCAGAGTGGAGTTAA...AGACCCCTCAAGGCTTCCCTTTGCTTTCCTAAGTCTTGGGAGTACCACCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACCCTCCCTGACAAAACTAGCTGTGGGAAAGGATCAAGGGAAATCCCATAAGCCTCTCACATTTTCTTaGGTAAGGGTTGGAGACATC | + |
|
Preference number: 2 (lower is better) Translates to: LPSLTKLAVGKDQGKSHKPLTFS*VRVGDI Trigger: GATGTCTCCAACCCTTACTCAAGAAAATGTGAGAGG...CTTATGGGATTTCCCTTGATCCTTTCCCACAGCTAGTTTTGTCAGGGAGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAAAGGGGGAAGGGAGGGCCTGATCACATTGCCTGGATTCCTACCCTGTTCACTACCATGCCTGGCTaGATTTTTAGTCTTTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FKRGKGGPDHIAWIPTLFTTMPG*IFSLLN Trigger: ATTCAAAAGACTAAAAATGCAGCCAGGCATGGTAGT...GAACAGGGTAGGAATCCAGGCAATGTGATCAGGCCCTCCCTTCCCCCTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATCTCACTGCTTCTGTGTaGCTACTGGAGTGGGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FTDILLTFKVRSPTTCQYLTASV*LLEWDK Trigger: TTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAG...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAATGGTGGTACTCCCAAGACTTAGGAAAGCAAAGGGAAGCCTTGAGGGGTCTCAGAATGATTTGGTTTaGGATTTTAAGACAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VMVVLPRLRKAKGSLEGSQNDLV*DFKTEG Trigger: GCCTTCTGTCTTAAAATCTCAAACCAAATCATTCTG...AGACCCCTCAAGGCTTCCCTTTGCTTTCCTAAGTCTTGGGAGTACCACCATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAATTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTTTCTTCCTCTCTGAGTaGGAGATGGAAGGGAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: YNSHFIPAPGQKSYGASVFFLSE*EMEGNQ Trigger: TTGATTCCCTTCCATCTCCCACTCAGAGAGGAAGAA...AACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATGAATCATTTTCCCCCTaGTCTGCCCTTCCGTATTTA | + |
|
Preference number: 2 (lower is better) Translates to: FTDILLTFKVRSPTTCQYESFSP*SALPYL Trigger: TAAATACGGAAGGGCAGACCAGGGGGAAAATGATTC...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGACAGAAGGCACTTTTAACATCTCCTGTAAGATGCTAACCAGAGAAACACTGTTTCTTCCTCTCTaGGTGGGAGATGGAAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FKTEGTFNISCKMLTRETLFLPL*VGDGRE Trigger: TTCCCTTCCATCTCCCACTCAGAGAGGAAGAAACAG...TGTTTCTCTGGTTAGCATCTTACAGGAGATGTTAAAAGTGCCTTCTGTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCCTCCCTGACAAAACTAGCTGTGGGAAAGGATCAAGGGAAATCCCATAAGCAGAATGATTTGGTTTaGGATTTTAAGACAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LPSLTKLAVGKDQGKSHKQNDLV*DFKTEG Trigger: GCCTTCTGTCTTAAAATCTCAAACCAAATCATTCTG...CTTATGGGATTTCCCTTGATCCTTTCCCACAGCTAGTTTTGTCAGGGAGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTTTCTCCAAAGACTACATCCACTTCCCACATCAGTGTCCTGAGAGCCTTCCAAGATGTTCTGTTTaGCTGTACTTTCTTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: WFFSKDYIHFPHQCPESLPRCSV*LYFLHY Trigger: ATAGTGAAGAAAGTACAGGCAAACAGAACATCTTGG...AAGGCTCTCAGGACACTGATGTGGGAAGTGGATGTAGTCTTTGGAGAAAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGAATCACTTCGAAAGCATGAAGCCCAGAATTACTGCAGGAATCATTTTCCCAAGGTCATTTGGAAATaGGGCCCAAGGGACATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YESLRKHEAQNYCRNHFPKVIWK*GPRDMF Trigger: AAACATGTCCCTTGGGCCCCATTTCCAAATGACCTT...GGGAAAATGATTCCTGCAGTAATTCTGGGCTTCATGCTTTCGAAGTGATTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATCTACTTCCCAAGTGCTaGGTTTATAGGCATGTACTA | + |
|
Preference number: 2 (lower is better) Translates to: FTDILLTFKVRSPTTCQYLLPKC*VYRHVL Trigger: TAGTACATGCCTATAAACCCAGCACTTGGGAAGTAG...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR CAA 90 bp | CACAGAAATGTTCACATTCACGGGGAAACACAACCTTTGATGAAATaGGAATTAAGCGGTCTTTTAAGGAACTGGTTAGAGCCTCCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: HRNVHIHGETQPLMK*ELSGLLRNWLEPPK Trigger: TTTAGGAGGCTCTAACCAGTTCCTTAAAAGACCGCTTAATTCCAATTTCATCAAAGGTTGTGTTTCCCCGTGAATGTGAACATTTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGACAGAAGGCACTTTTAACATCTCCTGTAAGATGCTAACCAGAGAAACAGTTAAAGCTTGTCTTTaGTTGGCTCGGTGTATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FKTEGTFNISCKMLTRETVKACL*LARCIL Trigger: AAGGATACACCGAGCCAATCAAAGACAAGCTTTAAC...TGTTTCTCTGGTTAGCATCTTACAGGAGATGTTAAAAGTGCCTTCTGTCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCAAGTGTTTGAGACGGTaGGGTGGAGATCCGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RAHHRHNGGGHEDQSCNCKCLRR*GGDPLA Trigger: GGCCAGCGGATCTCCACCCAACCGTCTCAAACACTT...GCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGTCGGGGAAGTTCACAGCCCCAAACAAGTTCCTGGACAGAACAGTGGGGAAGTGTTTGAGACGGTaGGGTGGAGATCCGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KKSGKFTAPNKFLDRTVGKCLRR*GGDPLA Trigger: GGCCAGCGGATCTCCACCCAACCGTCTCAAACACTT...CCCCACTGTTCTGTCCAGGAACTTGTTTGGGGCTGTGAACTTCCCCGACTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | CAGAAATCCACCTGCCTCTGCTCCCCAAGTACTGAGTaGGACTCAAGGTGTGTGTCACCAGGCCCAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QKSTCLCSPSTE*DSRCVSPGPAK Trigger: TTTGGCTGGGCCTGGTGACACACACCTTGAGTCTCACTCAGTACTTGGGGAGCAGAGGCAGGTGGATTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | AACTCAGAAATCCACCTGCCTCTGCTCCCCAAGTACTaGGTGAGACTCAAGGTGTGTGTCACCAGGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NSEIHLPLLPKY*VRLKVCVTRPS Trigger: GCTGGGCCTGGTGACACACACCTTGAGTCTCACTCAGTACTTGGGGAGCAGAGGCAGGTGGATTTCTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCCGACCTCAGAGCACTaGGCTTGTGCCTGCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPLGFFSLLLCGYWSGTKPTSEH*ACACFS Trigger: ACTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCGG...CTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGTCAAAATGCAGATTTaGCTTCAGTGGGCTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PTTDTMEEVMRTRAATALVKMQI*LQWAGS Trigger: ACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGAC...CAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
||
| 3UTR TCA 72 bp | CACTGCCTTGGGAGACCTGGACACAGGGCTATGAGATaGGCTCACTGTACAGTTCTCGAACGAGGACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HCLGRPGHRAMR*AHCTVLERGLG Trigger: ACCAAGTCCTCGTTCGAGAACTGTACAGTGAGCTCATCTCATAGCCCTGTGTCCAGGTCTCCCAAGGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | CTATACACCATATGCATGCAGGGCCTTCAGGAGCCATaGGAGGGGGTCAGATCCCCAGGAATTGGAGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYTICMQGLQEP*EGVRSPGIGVA Trigger: TGCAACTCCAATTCCTGGGGATCTGACCCCCTCTCATGGCTCCTGAAGGCCCTGCATGCATATGGTGTATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | GAGTGGGAGATGGAAGGGAATCAACCACCCTGTTTCTaGTGTCAACACTGCACCAGGGCTGTCAGCGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: EWEMEGNQPPCF*CQHCTRAVSAF Trigger: AAATGCGCTGACAGCCCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGGTGTGTGTCACCAGGCCCAGCCAAACCCTGCTTCTTCAGTGTTTAAATAAGCAAAGGGAAGCCTaGAGGGGTCTGGTGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKVCVTRPSQTLLLQCLNKQREA*RGLVEG Trigger: TCCCTCCACCAGACCCCTCAAGGCTTCCCTTTGCTT...ATTTAAACACTGAAGAAGCAGGGTTTGGCTGGGCCTGGTGACACACACCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR CCA 72 bp | TCGCCATGCCACTGGGGTGTGTACTTAGATCACCTCTaGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPCHWGVYLDHL*VSSHCFCVATG Trigger: TCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGATCTAAGTACACACCCCAGTGGCATGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTTTCTCCAAAGACTACATCCACTTCCCACATCAGTGTCCTGAGAGCCTTAAGTGTTTGAGACGGTaGGGTGGAGATCCGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WFFSKDYIHFPHQCPESLKCLRR*GGDPLA Trigger: GGCCAGCGGATCTCCACCCAACCGTCTCAAACACTT...AAGGCTCTCAGGACACTGATGTGGGAAGTGGATGTAGTCTTTGGAGAAAAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR CCA 72 bp | CCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTaGAGTGGGACAAAGCTTCCATGTTTCTCTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLGFFSLLLCGY*SGTKLPCFSSR Trigger: CCTGGAAGAGAAACATGGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | GAGGGGTCTGGTGGAGGGAACCCTCTCACATTTTCTTaGGTAAGGGTTGGAGACATCTGCAATGTCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EGSGGGNPLTFS*VRVGDICNVKT Trigger: TGTCTTGACATTGCAGATGTCTCCAACCCTTACTCAAGAAAATGTGAGAGGGTTCCCTCCACCAGACCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | GGTGTGTACTTAGATCACCTCTGGGTTTCTTCTCACTaGTTCTGTGTGGCTACTGGAGTGGGACAAAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVYLDHLWVSSH*FCVATGVGQSF Trigger: GAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGATCTAAGTACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | TCCTGTAAGATGCTAACCAGAGAAACACAGTCGCCATaGCACTGGGGTGTGTACTTAGATCACCTCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCKMLTRETQSP*HWGVYLDHLWV Trigger: AACCCAGAGGTGATCTAAGTACACACCCCAGTGGCATGGCGACTGTGTTTCTCTGGTTAGCATCTTACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | CTGCTTCGTGGTAAGGAAGGGAAGGAGGGATACTTCTaGCCCAGTTCTACCCACAGAATGATTTGGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLRGKEGKEGYF*PSSTHRMIWFE Trigger: CTCAAACCAAATCATTCTGTGGGTAGAACTGGGGCAGAAGTATCCCTCCTTCCCTTCCTTACCACGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | GGACTGCAGGCAAGCATGAGCACACTGTTCGGCAAATaGTGTTATTTCCAACAGCACCTGTTAACGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLQASMSTLFGK*CYFQQHLLTLS Trigger: ACTGAGCGTTAACAGGTGCTGTTGGAAATAACAGCATTTGCCGAACAGTGTGCTCATGCTTGCCTGCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR CCA 72 bp | GGTGTTCAGACTGTTTCTTCCTCTCTGAGTGGGAGATaGAAGGGAATCAACCACCCTGTTTCTGCTGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GVQTVSSSLSGR*KGINHPVSAVN Trigger: GTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCACTCAGAGAGGAAGAAACAGTCTGAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATCCGACCTCAGAGCACTaGGCTTGTGCCTGCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FTDILLTFKVRSPTTCQYPTSEH*ACACFS Trigger: ACTGAAGCAGGCACAAGCCAAGTGCTCTGAGGTCGG...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | GGAATGTCAAGTTTGAAGCCAGCCTGGGCTATGTACTaGGCTCTAGGACAGCCTAGGCTACAGAGAAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: GMSSLKPAWAMY*ALGQPRLQRKI Trigger: AATCTTTCTCTGTAGCCTAGGCTGTCCTAGAGCTCAGTACATAGCCCAGGCTGGCTTCAAACTTGACATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCTTCCCCCAAGATGTTCTGTTaGCCTGTACTTTCTTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: SGFLLTASVWLLEWDKASPKMFC*PVLSSL Trigger: TAGTGAAGAAAGTACAGGCAAACAGAACATCTTGGG...GGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATGGTGGTACTCCCAAGACTTAGGAAAGCAAAGGGAAGCCTTGAGGGGTCTAAGGGAACACATGTGTaGAGAGCTCAGCTACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VMVVLPRLRKAKGSLEGSKGTHV*RAQLLF Trigger: AAACAGTAGCTGAGCTCTCAACACATGTGTTCCCTT...AGACCCCTCAAGGCTTCCCTTTGCTTTCCTAAGTCTTGGGAGTACCACCATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | AAACATGGTCTCAAAATAGCCCAGATTGCCCCTGAATaGACTTCTGGTCTTCCTGCCTCTACTTCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KHGLKIAQIAPE*TSGLPASTSQV Trigger: CACTTGGGAAGTAGAGGCAGGAAGACCAGAAGTTCATTCAGGGGCAATCTGGGCTATTTTGAGACCATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR GCA 72 bp | GGTAAAGTGAAGTCACCTAGTGAGGACTTGTCAAAATaGAGATTTTGCTTCAGTGGGCTGGCAGTGAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GKVKSPSEDLSK*RFCFSGLAVRL Trigger: TAGCCTCACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTCACTAGGTGACTTCACTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
||
| 3UTR GCA 72 bp | TATGAATCACTTCGAAAGCATGAAGCCCAGAATTACTaGAGGAATCATTTTCCCCCTGGTCTGCCCTTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: YESLRKHEAQNY*RNHFPPGLPFR Trigger: ACGGAAGGGCAGACCAGGGGGAAAATGATTCCTGCAGTAATTCTGGGCTTCATGCTTTCGAAGTGATTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR CCA 72 bp | ATAAACTTAATGAAAGAAGTGTTTGAGACGGTTGGGTaGAGATCCGCTGGCCATCAGTCTTCCTTAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: INLMKEVFETVG*RSAGHQSSLGC Trigger: GCAGCCTAAGGAAGACTGATGGCCAGCGGATCTCCACCCAACCGTCTCAAACACTTCTTTCATTAAGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201855.2 ENSMUST00000202486.2 |
||
| 3UTR CCA 72 bp | GAGATGAGCTCACTGTACAGTTCTCGAACGAGGACTTaGTTGACCACAAAGACCATTCAGTACTTTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EMSSLYSSRTRT*LTTKTIQYFLD Trigger: GTCTAGAAAGTACTGAATGGTCTTTGTGGTCAACCAAGTCCTCGTTCGAGAACTGTACAGTGAGCTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAATTCCCATTTTATACCTGCCCCAGGCCAGAAATCCTATGGTGCATCAGTTAAGGGAACACATGTGTaGAGAGCTCAGCTACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: YNSHFIPAPGQKSYGASVKGTHV*RAQLLF Trigger: AAACAGTAGCTGAGCTCTCAACACATGTGTTCCCTT...AACTGATGCACCATAGGATTTCTGGCCTGGGGCAGGTATAAAATGGGAATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | CTAGCCAGACTTTCTCTTCCTCCCGAAAATCTGAAGTaGGGCTTCCACTGTTATGAATCACTTCGAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LARLSLPPENLK*GFHCYESLRKH Trigger: ATGCTTTCGAAGTGATTCATAACAGTGGAAGCCTCACTTCAGATTTTCGGGAGGAAGAGAAAGTCTGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTGACATTTTACTGACTTTTAAGGTCAGGTCACCCACCACCTGCCAGTATCCCAAGATGTTCTGTTaGCCTGTACTTTCTTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: FTDILLTFKVRSPTTCQYPKMFC*PVLSSL Trigger: TAGTGAAGAAAGTACAGGCAAACAGAACATCTTGGG...ATACTGGCAGGTGGTGGGTGACCTGACCTTAAAAGTCAGTAAAATGTCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | ATTAAAGAATTACTAGCAATGGCTGCTCACTTTAGTTaGGGACTGGGGGCTAGGGCTACATTTTATTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: IKELLAMAAHFS*GLGARATFYYL Trigger: GAGATAATAAAATGTAGCCCTAGCCCCCAGTCCTCAACTAAAGTGAGCAGCCATTGCTAGTAATTCTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | CTGATCACATTGCCTGGATTCCTACCCTGTTCTTTATaGCAAGGTTGTTCTCACAAAATAGGATTCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: LITLPGFLPCSL*QGCSHKIGFIH Trigger: GTGTATGAATCCTATTTTGTGAGAACAACCTTGTCATAAAGAACAGGGTAGGAATCCAGGCAATGTGATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| 3UTR TCA 72 bp | ATATTTCTATCTATATTAAAGAGGGAATCTCCCCGGTaGACTCCTTCTTACATGAAGGCTTACTCAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IFLSILKRESPR*TPSYMKAYSGA Trigger: AGCTCCTGAGTAAGCCTTCATGTAAGAAGGAGTTCACCGGGGAGATTCCCTCTTTAATATAGATAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS-3UTR CCA 90 bp | CACCTCTCCTGGGCCAATCGGTTTAAAAGGGGGAAGGGAGGGCCTGATCACATTGCTGGCTGTCATGCCTaGAGGCCAGGGCGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSWANRFKRGKGGPDHIAGCHA*RPGRRS Trigger: GCTCCGCCGCCCTGGCCTCCAGGCATGACAGCCAGC...AATGTGATCAGGCCCTCCCTTCCCCCTTTTAAACCGATTGGCCCAGGAGAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGTAATTCCAGCACTCTaGGGGCTGGAGGCCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHHRHNGGGHEDQSCNCAVIPAL*GLEARA Trigger: CGCCCTGGCCTCCAGCCCCCAGAGTGCTGGAATTAC...AGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
||
| CDS-3UTR CCA 90 bp | TTGGACAAGCCTACTCAGATAGACAGAAGAACAGGGGTGGGACATTCCAGGTCACAGCACTCTGGGGGCTaGAGGCCAGGGCGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDKPTQIDRRTGVGHSRSQHSGG*RPGRRS Trigger: GCTCCGCCGCCCTGGCCTCCAGCCCCCAGAGTGCTG...TGACCTGGAATGTCCCACCCCTGTTCTTCTGTCTATCTGAGTAGGCTTGTCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
||
| CDS-3UTR GCA 90 bp | TTACCCTCCCTGACAAAACTAGCTGTGGGAAAGGATCAAGGGAAATCCCATAAGCTGCGCTGGCTGTCATaGCTGGAGGCCAGGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLTKLAVGKDQGKSHKLRWLS*LEARAA Trigger: CGCCGCCCTGGCCTCCAGGCATGACAGCCAGCGCAG...CTTATGGGATTTCCCTTGATCCTTTCCCACAGCTAGTTTTGTCAGGGAGGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGTGGAGATCCGCTGGCCATCAGTCTTCCTTAGGCTGCAGCTGTCGCTTCACAGAAGAACAGGGGTaGGACATTCCAGGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGWRSAGHQSSLGCSCRFTEEQG*DIPGQH Trigger: GTGCTGACCTGGAATGTCCCACCCCTGTTCTTCTGT...GAAGCGACAGCTGCAGCCTAAGGAAGACTGATGGCCAGCGGATCTCCACCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGGGGGAAGGGAGGGCCTGATCACATTGCCTGGATTCCTACCCTGTTCGACCAGAGCTGCAACTaGGCTGGCTGTCATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKRGKGGPDHIAWIPTLFDQSCN*AGCHAW Trigger: CCAGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTC...GAACAGGGTAGGAATCCAGGCAATGTGATCAGGCCCTCCCTTCCCCCTTTTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAGATGGAAGGGAATCAACCACCCTGTTTCTGCTGTCAACACTGCACCAGGCAATGGAGGAGGTCATaGGGACCAGAGCTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WEMEGNQPPCFCCQHCTRQWRRS*GPELQL Trigger: CAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTG...CCTGGTGCAGTGTTGACAGCAGAAACAGGGTGGTTGATTCCCTTCCATCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTCATGAGGACCAGAGCTGCAACTGCGCTGGCTGTCATGCCAAGTAATAACGAGCGGGGGCTGGGGTaGATATCTGTAATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVMRTRAATALAVMPSNNERGLG*ISVIPA Trigger: TGCTGGAATTACAGATATGCACCCCAGCCCCCGCTC...GTTATTACTTGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000202298.4 ENSMUST00000202486.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCTTCCCAATGGAGGAGGTCATaGGGACCAGAGCTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFLLTASVWLLEWDKASQWRRS*GPELQL Trigger: CAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTG...GGAAGCTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| CDS-3UTR GCA 90 bp | GTAATGGTGGTACTCCCAAGACTTAGGAAAGCAAAGGGAAGCCTTGAGGGGTCTCAGTCTTCCTTAGGCTaGAGCTGTCGCTTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMVVLPRLRKAKGSLEGSQSSLG*SCRFQA Trigger: GGCCTGGAAGCGACAGCTGCAGCCTAAGGAAGACTG...AGACCCCTCAAGGCTTCCCTTTGCTTTCCTAAGTCTTGGGAGTACCACCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051758.11 |
||
| CDS-3UTR GCA 90 bp | CCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGCTGTCAAAATGCAGATTTTaGTTCAGTGGGCTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTTDTMEEVMRTRAATALSKCRF*FSGLAV Trigger: CACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGA...CAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAAAGTACAGAATGTAGGCCAGGTACAAAGAGCCCACCACAGACACAATGAGCGGGGGCTGGGGTaGATATCTGTAATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHKVQNVGQVQRAHHRHNERGLG*ISVIPA Trigger: TGCTGGAATTACAGATATGCACCCCAGCCCCCGCTC...ATTGTGTCTGTGGTGGGCTCTTTGTACCTGGCCTACATTCTGTACTTTGTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000202298.4 ENSMUST00000202486.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTGCGAGGACTTGTCAAAATaGAGATTTTGCTTCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAHHRHNGGGHEDQSCNCEDLSK*RFCFSG Trigger: CCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTC...GCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| 3UTR CAA 72 bp | TGGTACTCCCAAGACTTAGGAAAGCAAAGGGAAGCCTaGAGGGGTCTGGTGGAGGGAACCCTCTCACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: WYSQDLGKQREA*RGLVEGTLSHF Trigger: AAAATGTGAGAGGGTTCCCTCCACCAGACCCCTCAAGGCTTCCCTTTGCTTTCCTAAGTCTTGGGAGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| CDS-3UTR CCA 90 bp | CCATCAGTCTTCCTTAGGCTGCAGCTGTCGCTTCCAGGCCTCATTCAAATAAACCAGATTTTGCTTCAGTaGGCTGGCAGTGAGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSVFLRLQLSLPGLIQINQILLQ*AGSEAK Trigger: CTTAGCCTCACTGCCAGCCCACTGAAGCAAAATCTG...GTTTATTTGAATGAGGCCTGGAAGCGACAGCTGCAGCCTAAGGAAGACTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTCTGGGTTTCTTCTCACTGCTTCTGTGTGGCTACTGGAGTGGGACAAAGCTGCGCTGGCTGTCATaGCAAGTAATAACTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLGFFSLLLCGYWSGTKLRWLS*QVITVV Trigger: TACTACAGTTATTACTTGGCATGACAGCCAGCGCAG...CTTTGTCCCACTCCAGTAGCCACACAGAAGCAGTGAGAAGAAACCCAGAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051758.11 |
||
| CDS-3UTR GCA 90 bp | TTTAAGACAGAAGGCACTTTTAACATCTCCTGTAAGATGCTAACCAGAGAAACAGACCAGAGCTGCAACTaGGCTGGCTGTCATGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKTEGTFNISCKMLTRETDQSCN*AGCHAK Trigger: CTTGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTC...TGTTTCTCTGGTTAGCATCTTACAGGAGATGTTAAAAGTGCCTTCTGTCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051758.11 |
||
| 3UTR CAA 72 bp | ACCAGGGCTGTCAGCGCATTTCCCAAGATGTTCTGTTaGCCTGTACTTTCTTCACTATGTATCAGTCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRAVSAFPKMFC*PVLSSLCISHD Trigger: ATCGTGACTGATACATAGTGAAGAAAGTACAGGCAAACAGAACATCTTGGGAAATGCGCTGACAGCCCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR CAA 72 bp | TCAGCACTTGGTAAAGTGAAGTCACCTAGTGAGGACTaGTCAAAATGCAGATTTTGCTTCAGTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SALGKVKSPSED*SKCRFCFSGLA Trigger: TGCCAGCCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTCACTAGGTGACTTCACTTTACCAAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202298.4 |
||
| 3UTR CAA 72 bp | ATGAGCTCACTGTACAGTTCTCGAACGAGGACTTGGTaGACCACAAAGACCATTCAGTACTTTCTAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLYSSRTRTW*TTKTIQYFLDV Trigger: AACGTCTAGAAAGTACTGAATGGTCTTTGTGGTCAACCAAGTCCTCGTTCGAGAACTGTACAGTGAGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| CDS-3UTR TCA 90 bp | ACATATGTGGTGACGCAGATGATGCAAAACTCTTTCAGCACAAAGTACAGAATGCAGCACTTGGTAAAGTaGAGTCACCTAGTGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TYVVTQMMQNSFSTKYRMQHLVK*SHLVRT Trigger: AGTCCTCACTAGGTGACTTCACTTTACCAAGTGCTG...CATTCTGTACTTTGTGCTGAAAGAGTTTTGCATCATCTGCGTCACCACATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| 3UTR CAA 72 bp | GTTCACATTCACGGGGAAACACAACCTTTGATGAAATaGGAATTAAGCGGTCTTTTAAGGAACTGGTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHIHGETQPLMK*ELSGLLRNWLE Trigger: CTCTAACCAGTTCCTTAAAAGACCGCTTAATTCCAATTTCATCAAAGGTTGTGTTTCCCCGTGAATGTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051758.11 ENSMUST00000201855.2 |
||
| 3UTR CAA 72 bp | ATTGCCTGGATTCCTACCCTGTTCTTTATGACAAGGTaGTTCTCACAAAATAGGATTCATACACATACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAWIPTLFFMTR*FSQNRIHTHTA Trigger: GGCAGTATGTGTATGAATCCTATTTTGTGAGAACAACCTTGTCATAAAGAACAGGGTAGGAATCCAGGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS GCA 90 bp | AGAGCCCACCACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTaGAACTGCGCTGGCTGTCATGCCTGGAGGCCAGGGCGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHHRHNGGGHEDQS*NCAGCHAWRPGRRS Trigger: GCTCCGCCGCCCTGGCCTCCAGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTGGTGGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS GCA 90 bp | GGTAAAGTGAAGTCACCTAGTGAGGACTTGTCAAAATGCAGATTTTaGTTCAGTGGGCTGGCAGTGAGGCTAAGACTGCATTCAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKVKSPSEDLSKCRF*FSGLAVRLRLHSTK Trigger: TTTTGTTGAATGCAGTCTTAGCCTCACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGACAAGTCCTCACTAGGTGACTTCACTTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| CDS-3UTR CAA 90 bp | AGCACATATGTGGTGACGCAGATGATGCAAAACTCTTTCAGCACAAAGTACAGAGTCAAAATGCAGATTTaGCTTCAGTGGGCTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: STYVVTQMMQNSFSTKYRVKMQI*LQWAGS Trigger: ACTGCCAGCCCACTGAAGCAAAATCTGCATTTTGAC...TCTGTACTTTGTGCTGAAAGAGTTTTGCATCATCTGCGTCACCACATATGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202486.2 |
||
| CDS GCA 72 bp | CACAATGGAGGAGGTCATGAGGACCAGAGCTGCAACTaGGCTGGCTGTCATGCCTGGAGGCCAGGGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HNGGGHEDQSCN*AGCHAWRPGRR Trigger: CCGCCGCCCTGGCCTCCAGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
||
| CDS GCA 72 bp | CACAGACACAATGGAGGAGGTCATGAGGACCAGAGCTaGAACTGCGCTGGCTGTCATGCCTGGAGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HRHNGGGHEDQS*NCAGCHAWRPG Trigger: CCCTGGCCTCCAGGCATGACAGCCAGCGCAGTTGCAGCTCTGGTCCTCATGACCTCCTCCATTGTGTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201855.2 |
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