Pregenerated sensors for VIPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032528Ensembl transcript IDs: ENSMUST00000035115.5
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGTCTCCTCTCCAGACTGTGCCCAGCACACCCCATGGGGTGCCTaGGGACTTGCCCGGACACTCACTGTTCCTTCCAAAGGGACTGCT | + |
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Preference number: 1 (lower is better) Translates to: SVSSPDCAQHTPWGA*GLARTLTVPSKGTA Trigger: AGCAGTCCCTTTGGAAGGAACAGTGAGTGTCCGGGCAAGTCCCCAGGCACCCCATGGGGTGTGCTGGGCACAGTCTGGAGAGGAGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | TGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGATaGCCTCCTGACGCATCCCTCTGGCCTGCTGCGGTTGCTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: WLSHLPCVEAGALPR*PPDASLWPAAVALS Trigger: GGACAGAGCAACCGCAGCAGGCCAGAGGGATGCGTCAGGAGGCCATCTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | TCCCAGGGCCCTGCGCCTTACGCTGGTGCCACAACACAGCACTGCTaGGGAAATCTTGGTCCCATTCATTTAGGCAGGGGGTTGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: SQGPAPYAGATTQHC*GNLGPIHLGRGLVL Trigger: CAGTACCAACCCCCTGCCTAAATGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | TCTTGGCTGGTAACTGCTGCTCTCCCAGGGCCCTGCGCCTTACGCTaGTGCCACAACACAGCACTGCTGGGGAAATCTTGGTCCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: SWLVTAALPGPCALR*CHNTALLGKSWSHS Trigger: TGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTACCAGCCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | TGGCTGGTAACTGCTGCTCTCCCAGGGCCCTGCGCCTTACGCTGGTaGCACAACACAGCACTGCTGGGGAAATCTTGGTCCCATTCATTT | + |
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Preference number: 1 (lower is better) Translates to: WLVTAALPGPCALRW*HNTALLGKSWSHSF Trigger: AAATGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTACCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | TGCGCCTTACGCTGGTGCCACAACACAGCACTGCTGGGGAAATCTTaGTCCCATTCATTTAGGCAGGGGGTTGGTACTGGGTGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: CALRWCHNTALLGKS*SHSFRQGVGTGCSS Trigger: GCTGCTGCACCCAGTACCAACCCCCTGCCTAAATGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR TCA 90 bp | GCTCCTGCCCAAAGCCAGAAGGGTCATCTCTCACTAGAGCAGAGGTaGCACAGCTGCTTAGAAGAAGCAGGAGACCCACAGTGGCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: APAQSQKGHLSLEQR*HSCLEEAGDPQWLG Trigger: CCCTAGCCACTGTGGGTCTCCTGCTTCTTCTAAGCAGCTGTGTCACCTCTGCTCTAGTGAGAGATGACCCTTCTGGCTTTGGGCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | CTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTaGCAAGATGGCCTCCTGACGCATCCCTCTGGCCTGCTGCGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LFSGYPICLVWRLGH*QDGLLTHPSGLLRL Trigger: CAACCGCAGCAGGCCAGAGGGATGCGTCAGGAGGCCATCTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | CACACTTTGAGTTTTACTCACTTTGTCCTCTTGGCTGGTAACTGCTaGTCTCCCAGGGCCCTGCGCCTTACGCTGGTGCCACAACACAGC | + |
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Preference number: 1 (lower is better) Translates to: HTLSFTHFVLLAGNC*SPRALRLTLVPQHS Trigger: GCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTACCAGCCAAGAGGACAAAGTGAGTAAAACTCAAAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | ATTCATTTAGGCAGGGGGTTGGTACTGGGTGCAGCAGCCTTTGAATaGGGTATGGCAGGCAGGTTTGAACCTCTGCTAGCCCATGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: IHLGRGLVLGAAAFE*GMAGRFEPLLAHAG Trigger: GCCAGCATGGGCTAGCAGAGGTTCAAACCTGCCTGCCATACCCCATTCAAAGGCTGCTGCACCCAGTACCAACCCCCTGCCTAAATGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | GGCCTGCTGCGGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTaGGGCCATAGACTCCCGAAGCTATTAATATCTTGGCCATCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GLLRLLCPFPGRPSL*GHRLPKLLISWPSL Trigger: CAGGGATGGCCAAGATATTAATAGCTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACCGCAGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | AGAGGGGCTCTTCTCAGATACCCTGCAGACACAACATTCAGCACCTaGTCCCAAACCAGGCCATTGTCTCACCTCCTCTCTTTCCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: RGALLRYPADTTFST*SQTRPLSHLLSFLW Trigger: CCACAGGAAAGAGAGGAGGTGAGACAATGGCCTGGTTTGGGACCAGGTGCTGAATGTTGTGTCTGCAGGGTATCTGAGAAGAGCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR TCA 90 bp | GAGGGTCACAACGGACCCCTGTCACAACCTCTTCACATTTACATGTaGATCAAAGGCTCTTGTGTGGGGCTCCTGCCCAAAGCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: EGHNGPLSQPLHIYM*IKGSCVGLLPKARR Trigger: CCTTCTGGCTTTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCACATGTAAATGTGAAGAGGTTGTGACAGGGGTCCGTTGTGACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | AAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGTTCGCCTaGCAAAAGGTCCTGGGTGTCCTGGAAGTCCCAGGGCTGTCACTA | + |
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Preference number: 1 (lower is better) Translates to: KSLKCPLDGDRDEFA*QKVLGVLEVPGLSL Trigger: TAGTGACAGCCCTGGGACTTCCAGGACACCCAGGACCTTTTGGCAGGCGAACTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | GTCGAACCCTTGCTGGCTGTGACAGCTCTGTTGGCTGTTTTGATTTaGTCTGAGGCAGAATCTGTCTCCTCCCAGATGGGTTTAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VEPLLAVTALLAVLI*SEAESVSSQMGLGE Trigger: CTCCCCTAAACCCATCTGGGAGGAGACAGATTCTGCCTCAGACCAAATCAAAACAGCCAACAGAGCTGTCACAGCCAGCAAGGGTTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | CTTCTCACTTGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTTaGCTCCTAGGCAGCAGCGACCTGGTTGCTGCATTTCCTGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: LLTCAGESPLLSPLG*LLGSSDLVAAFPVC Trigger: GCAAACAGGAAATGCAGCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR TCA 90 bp | CACAAGTGTGTTTGCACAAACCCTTGGGAGCTAGCTGTCTCTCACTaGCCAACCAATGTCACCTGCTTTGCCCCACTGCTCTGTCTACTC | + |
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Preference number: 1 (lower is better) Translates to: HKCVCTNPWELAVSH*PTNVTCFAPLLCLL Trigger: GAGTAGACAGAGCAGTGGGGCAAAGCAGGTGACATTGGTTGGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | CTTAGCTCCTCACCCAAGCCTCCCAAGTCTCTCTTTATTCCGAAATaGCCTCCAATTAGCCTCTCACCTCCTAACTCTGCTCGTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSSSPKPPKSLFIPK*PPISLSPPNSARPL Trigger: GAGAGGACGAGCAGAGTTAGGAGGTGAGAGGCTAATTGGAGGGCATTTCGGAATAAAGAGAGACTTGGGAGGCTTGGGTGAGGAGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR GCA 90 bp | TCTGTCTACTCCTTTCCATTAGCCAGACTGGCCTCTTCTCACTTGTaGTGGGGAATCTCCATTATTGAGCCCTCTTGGTTGGCTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SVYSFPLARLASSHL*WGISIIEPSWLAPR Trigger: CCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCAGTCTGGCTAATGGAAAGGAGTAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | GGGGAACCAAGCCTGCTAGAGCCAATGTTTATTGTCATACAAGCCTaGTGCAGCTCTGAGAAGAGCCCGCTGACACCAGTTTGGATTAGA | + |
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Preference number: 1 (lower is better) Translates to: GEPSLLEPMFIVIQA*CSSEKSPLTPVWIR Trigger: TCTAATCCAAACTGGTGTCAGCGGGCTCTTCTCAGAGCTGCACCAGGCTTGTATGACAATAAACATTGGCTCTAGCAGGCTTGGTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | AGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGCTATTAATATCTTaGCCATCCCTGCCTAGAGCAGGGTGTTTAATGACTGCCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RPSLWGHRLPKLLIS*PSLPRAGCLMTASC Trigger: ACAGCTGGCAGTCATTAAACACCCTGCTCTAGGCAGGGATGGCCAAGATATTAATAGCTTCGGGAGTCTATGGCCCCAAAGACTTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR TCA 90 bp | AGGTTTGAACCTCTGCTAGCCCATGCTGGCTTCTTTACACCAGCCTaGCACCCACAAGTTTACACAAGTGTGTTTGCACAAACCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: RFEPLLAHAGFFTPA*HPQVYTSVFAQTLG Trigger: CCCAAGGGTTTGTGCAAACACACTTGTGTAAACTTGTGGGTGTCAGGCTGGTGTAAAGAAGCCAGCATGGGCTAGCAGAGGTTCAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CCA 90 bp | TGTCACAACCTCTTCACATTTACATGTGAATCAAAGGCTCTTGTGTaGGGCTCCTGCCCAAAGCCAGAAGGGTCATCTCTCACTAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: CHNLFTFTCESKALV*GSCPKPEGSSLTRA Trigger: TGCTCTAGTGAGAGATGACCCTTCTGGCTTTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCACATGTAAATGTGAAGAGGTTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCCAGGGCCCTGCGCCTTACGCTGGTGCCACAACACAGCACTGCTGGGGGCATGGACCGGGTCCTaGCTGCAGCAAAGGATTGTG | + |
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Preference number: 2 (lower is better) Translates to: ALPGPCALRWCHNTALLGAWTGS*LQQRIV Trigger: CACAATCCTTTGCTGCAGCCAGGACCCGGTCCATGC...CCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CAA 90 bp | CAGGAGGTGAATGCAGATGTTGTGCGCATGACTGGCAGAGCAGCCTaGGGTGGTGGAGTCCGATGCTGGTTCCTCCTTGCATCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QEVNADVVRMTGRAA*GGGVRCWFLLASSR Trigger: CCTGGAGGATGCAAGGAGGAACCAGCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGTCATGCGCACAACATCTGCATTCACCTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGAGGGACAAAGTCACTTGGTaGGCACGGGCAGGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RSFWVKARLTRGQWFGLRDKVTW*ARAGLP Trigger: AGGCAGCCCTGCCCGTGCTCACCAAGTGACTTTGTC...CCTCAGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGCAGGAGACCCACAGTaGCTAGGGGAACCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPAGDPQ*LGEPSL Trigger: CAGGCTTGGTTCCCCTAGCCACTGTGGGTCTCCTGC...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGACGGGGCGGAACCTTTTaGCCTCAGAGTTCCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRRGGTF*PQSSKA Trigger: AGCTTTGGAACTCTGAGGGCAAAAGGTTCCGCCCCG...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCATTATTGAGCCCTCTTGGTTGGCTCCTAGGCAGCAGCGACCTGGTTGCCTTGTGTGGGGCTCCTaGCCAAAGCCAGAAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ISIIEPSWLAPRQQRPGCLVWGS*PKPEGS Trigger: TGACCCTTCTGGCTTTGGGCAGGAGCCCCACACAAG...GCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTTGTTGTGCGCATGACTaGCAGAGCAGCCTTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPCCAHD*QSSLGW Trigger: CCACCCAAGGCTGCTCTGCCAGTCATGCGCACAACA...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGTTCCTGTGGATGGCCTaGCACCCTTTCCAGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLCPFPGRPSLWGHRLPKFLWMA*HPFQTW Trigger: CCAGGTCTGGAAAGGGTGCCAGGCCATCCACAGGAA...CTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CAA 90 bp | TACCCTGCAGACACAACATTCAGCACCTGGTCCCAAACCAGGCCATaGTCTCACCTCCTCTCTTTCCTGTGGATGGCCTGGCACCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: YPADTTFSTWSQTRP*SHLLSFLWMAWHPF Trigger: GAAAGGGTGCCAGGCCATCCACAGGAAAGAGAGGAGGTGAGACAATGGCCTGGTTTGGGACCAGGTGCTGAATGTTGTGTCTGCAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGTACATAAGGCTAGTGGACTGGTCCTACTTGATGGACAAAGTCACTTGGTGGTCGCTGCAGACCTCTaGTCCAGGGGCTGGCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VVHKASGLVLLDGQSHLVVAADL*SRGWRG Trigger: CCCACGCCAGCCCCTGGAGCAGAGGTCTGCAGCGAC...CACCAAGTGACTTTGTCCATCAAGTAGGACCAGTCCACTAGCCTTATGTACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGCAGGGGGTTGGTACTaGGTGCAGCAGCCTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPAGGWY*VQQPLN Trigger: ATTCAAAGGCTGCTGCACCCAGTACCAACCCCCTGC...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGAGGTTGCTTTCCAGGAGGTaGATGCAGATGTTGTGCGCA | + |
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Preference number: 2 (lower is better) Translates to: RSFWVKARLTRGQWFGLRLLSRR*MQMLCA Trigger: TGCGCACAACATCTGCATTCACCTCCTGGAAAGCAA...CCTCAGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTCATGCCTCTGACCCTTaGAGCAGTGGTTGGTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPHASDP*SSGWCV Trigger: TACACACCAACCACTGCTGCAAGGGTCAGAGGCATG...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | TTTACACAAGTGTGTTTGCACAAACCCTTGGGAGCTAGCTGTCTCTCACTGACCGAGGGAGGCATAAGATaGCTTGCCCCCTCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FTQVCLHKPLGASCLSLTEGGIR*LAPSPG Trigger: GCCTGGGGAGGGGGCAAGGCATCTTATGCCTCCCTC...GGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGCCTGCTTTGCCCCACTaGTCTGTCTACTCCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLCPFPGRPSLWGHRLPKPALPH*SVYSFP Trigger: TGGAAAGGAGTAGACAGAGCAGTGGGGCAAAGCAGG...CTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGGGACCGGGTCCTGGCTaGAGCAAAGGATTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: WPKLVKSLKCPLDGDRDEGPGPG*SKGLCP Trigger: GGGACACAATCCTTTGCTGCAGCCAGGACCCGGTCC...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGTGGGAGGACTGCCTGTaGACAAGCCTTTCCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LYFLVIPFALCGGWGIAKWEDCL*TSLSHR Trigger: TCTGTGGGAAAGGCTTGTTCACAGGCAGTCCTCCCA...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | TTTACACAAGTGTGTTTGCACAAACCCTTGGGAGCTAGCTGTCTCTCACTGACCGGTGGAGTCCGATGCTaGTTCCTCCTTGCATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FTQVCLHKPLGASCLSLTGGVRC*FLLASS Trigger: GGAGGATGCAAGGAGGAACCAGCATCGGACTCCACC...GGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | TTTACACAAGTGTGTTTGCACAAACCCTTGGGAGCTAGCTGTCTCTCACTGACCTTGAGCCCTCTTGGTTaGCTCCTAGGCAGCAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: FTQVCLHKPLGASCLSLTLSPLG*LLGSSD Trigger: GTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAA...GGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGGCTCTGTCCTTTTCCTaGGAGGCCAAGTCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LYFLVIPFALCGGWGIAKALSFS*EAKSLG Trigger: CCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGC...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR CAA 90 bp | TGCTCTGTCTACTCCTTTCCATTAGCCAGACTGGCCTCTTCTCACTaGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CSVYSFPLARLASSH*CWGISIIEPSWLAP Trigger: AGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCAGTCTGGCTAATGGAAAGGAGTAGACAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTACAGGAAAGGATACCTaGTCTCACAGGACTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPTGKDT*SHRTQY Trigger: ATACTGAGTCCTGTGAGAGCAGGTATCCTTTCCTGT...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGATTACACAAGTGTGTTTaGACAAACCCTTGGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRLHKCV*TNPWEL Trigger: TAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAA...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGTCTGCTAGCCCATGCTaGCTTCTTTACACCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LYFLVIPFALCGGWGIAKSASPC*LLYTSL Trigger: CAGGCTGGTGTAAAGAAGCCAGCATGGGCTAGCAGA...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 90 bp | ACCCCTGTCACAACCTCTTCACATTTACATGTGAATCAAAGGCTCTaGTGTGGGGCTCCTGCCCAAAGCCAGAAGGGTCATCTCTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: TPVTTSSHLHVNQRL*CGAPAQSQKGHLSL Trigger: TAGTGAGAGATGACCCTTCTGGCTTTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCACATGTAAATGTGAAGAGGTTGTGACAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 90 bp | CAGCCTGACACCCACAAGTTTACACAAGTGTGTTTGCACAAACCCTaGGGAGCTAGCTGTCTCTCACTGACCAACCAATGTCACCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QPDTHKFTQVCLHKP*GASCLSLTNQCHLL Trigger: AAGCAGGTGACATTGGTTGGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAACTTGTGGGTGTCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 90 bp | GGAGCCATGCTTTCGTTGTTGGTTGTCTCCCAGGGTGAGACCTACTaGACAATAGGAAGCCCTAAGGTGGCCAAAGTTGGTCAAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GAMLSLLVVSQGETY*TIGSPKVAKVGQVF Trigger: AAAGACTTGACCAACTTTGGCCACCTTAGGGCTTCCTATTGTCAAGTAGGTCTCACCCTGGGAGACAACCAACAACGAAAGCATGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGGGGAATCTCCATTATTaGGCCCTCTTGGTTGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WPKLVKSLKCPLDGDRDEGNLHY*ALLVGS Trigger: GGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCC...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGACTCTCCACAGGAACTaGAGACTGAGGGTGGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: LYFLVIPFALCGGWGIAKTLHRN*RLRVAI Trigger: TATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGAGT...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGTCACTAGAGCAGAGGTaGCACAGCTGCTTAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WPKLVKSLKCPLDGDRDESLEQR*HSCLEE Trigger: TTCTTCTAAGCAGCTGTGTCACCTCTGCTCTAGTGA...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGACAACACAGCACTGCTaGGGAAATCTTGGTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: WPKLVKSLKCPLDGDRDETTQHC*GNLGPI Trigger: AATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGT...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGTTGGCTGTTTTGATTTaGTCTGAGGCAGAATCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYFLVIPFALCGGWGIAKLAVLI*SEAESV Trigger: GACAGATTCTGCCTCAGACCAAATCAAAACAGCCAA...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | ACTGCTGCTCTCCCAGGGCCCTGCGCCTTACGCTGGTaGCACAACACAGCACTGCTGGGGAAATCTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TAALPGPCALRW*HNTALLGKSWS Trigger: GGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | TCCTCTTGGCTGGTAACTGCTGCTCTCCCAGGGCCCTaGGCCTTACGCTGGTGCCACAACACAGCACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSWLVTAALPGP*ALRWCHNTALL Trigger: CAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTACCAGCCAAGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | TCAGTCTCCTCTCCAGACTGTGCCCAGCACACCCCATaGGGTGCCTGGGGACTTGCCCGGACACTCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVSSPDCAQHTP*GAWGLARTLTV Trigger: AACAGTGAGTGTCCGGGCAAGTCCCCAGGCACCCCATGGGGTGTGCTGGGCACAGTCTGGAGAGGAGACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CTGGCTGCAGCAAAGGATTGTGTCCCTACAAAAGGCTaGAGCCAGCGGCGTCGCTGCAGACCTCTGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAAAKDCVPTKG*SQRRRCRPLLQ Trigger: CTGGAGCAGAGGTCTGCAGCGACGCCGCTGGCTCCAGCCTTTTGTAGGGACACAATCCTTTGCTGCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | ACTGGCAGAGCAGCCTTGGGTGGTGGAGTCCGATGCTaGTTCCTCCTTGCATCCTCCAGGGTTAGACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TGRAALGGGVRC*FLLASSRVRPP Trigger: GGGAGGTCTAACCCTGGAGGATGCAAGGAGGAACCAGCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CTGTGTGCTCATGCCTCTGACCCTTGCAGCAGTGGTTaGTGTGTAGATAAGCGCCCAGAGGCGGCAGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: LCAHASDPCSSG*CVDKRPEAAAR Trigger: GCGAGCTGCCGCCTCTGGGCGCTTATCTACACACCAACCACTGCTGCAAGGGTCAGAGGCATGAGCACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | GTAACTGCTGCTCTCCCAGGGCCCTGCGCCTTACGCTaGTGCCACAACACAGCACTGCTGGGGAAATCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTAALPGPCALR*CHNTALLGKSW Trigger: CCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | TCTCCAGACTGTGCCCAGCACACCCCATGGGGTGCCTaGGGACTTGCCCGGACACTCACTGTTCCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPDCAQHTPWGA*GLARTLTVPSK Trigger: TTTGGAAGGAACAGTGAGTGTCCGGGCAAGTCCCCAGGCACCCCATGGGGTGTGCTGGGCACAGTCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGATaGCCTCCTGACGCATCCCTCTGGCCTGCTGCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLPCVEAGALPR*PPDASLWPAAV Trigger: AACCGCAGCAGGCCAGAGGGATGCGTCAGGAGGCCATCTTGGCAATGCCCCAGCCTCCACACAAGGCAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | GGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTaGCAAGATGGCCTCCTGACGCATCCCTCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GYPICLVWRLGH*QDGLLTHPSGL Trigger: CAGGCCAGAGGGATGCGTCAGGAGGCCATCTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | GAGGGAGGGGGCTGCATCCTCAGAGAGGAGTCTCAATaGCAACGCTTAACCCAAAGCGACTTGAGCGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGGGCILREESQ*QRLTQSDLSAP Trigger: TGGGGCGCTCAAGTCGCTTTGGGTTAAGCGTTGCCATTGAGACTCCTCTCTGAGGATGCAGCCCCCTCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | GGCAGGGGGTTGGTACTGGGTGCAGCAGCCTTTGAATaGGGTATGGCAGGCAGGTTTGAACCTCTGCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRGLVLGAAAFE*GMAGRFEPLLA Trigger: GGCTAGCAGAGGTTCAAACCTGCCTGCCATACCCCATTCAAAGGCTGCTGCACCCAGTACCAACCCCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGGGAGGACCGCAACACAGCTGTGATCCCCAAACTGAAACTCCAGGTCACACGGGGCGGAACCTTTaGCCCTCAGAGTTCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PEGGPQHSCDPQTETPGHTGRNL*PSEFQS Trigger: GCTTTGGAACTCTGAGGGCAAAAGGTTCCGCCCCGT...GTGACCTGGAGTTTCAGTTTGGGGATCACAGCTGTGTTGCGGTCCTCCCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | CAGTGGAATTCTAGGCACCGACGGGGCGGAACCTTTTaGCCTCAGAGTTCCAAAGCTTTGAGGGCAGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: QWNSRHRRGGTF*PQSSKALRAGG Trigger: ACCGCCTGCCCTCAAAGCTTTGGAACTCTGAGGGCAAAAGGTTCCGCCCCGTCGGTGCCTAGAATTCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | AGATGTTGTGCGCATGACTGGCAGAGCAGCCTTGGGTaGTGGAGTCCGATGCTGGTTCCTCCTTGCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RCCAHDWQSSLG*WSPMLVPPCIL Trigger: GAGGATGCAAGGAGGAACCAGCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGTCATGCGCACAACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CCTGCGCCTTACGCTGGTGCCACAACACAGCACTGCTaGGGAAATCTTGGTCCCATTCATTTAGGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAPYAGATTQHC*GNLGPIHLGRG Trigger: CCCCCTGCCTAAATGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACAGGAACTGGAGACTGAGGGTGGCAATAGCATCTATGGTAATGCGACCACTGGCAGAGCAGCCTaGGGTGGTGGAGTCCGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SPQELETEGGNSIYGNATTGRAA*GGGVRC Trigger: GCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGT...GGTCGCATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAGCAGCAGCGACCTGGTaGCTGCATTTCCTGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRAAATW*LHFLFA Trigger: AGCAAACAGGAAATGCAGCAACCAGGTCGCTGCTGC...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | TCCGACAGGCTGTGTCCTGAGTGGGAGGACTGCCTGTaGACAAGCCTTTCCCACAGAACGAACCTTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SDRLCPEWEDCL*TSLSHRTNLLW Trigger: CCAGAGAAGGTTCGTTCTGTGGGAAAGGCTTGTTCACAGGCAGTCCTCCCACTCAGGACACAGCCTGTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | AAGTGCCCACTAGATGGCGATAGAGATGAGTTCGCCTaGCAAAAGGTCCTGGGTGTCCTGGAAGTCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KCPLDGDRDEFA*QKVLGVLEVPG Trigger: CCCTGGGACTTCCAGGACACCCAGGACCTTTTGGCAGGCGAACTCATCTCTATCGCCATCTAGTGGGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | TTTCCAGGAGGTGAATGCAGATGTTGTGCGCATGACTaGCAGAGCAGCCTTGGGTGGTGGAGTCCGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPGGECRCCAHD*QSSLGWWSPML Trigger: CAGCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGTCATGCGCACAACATCTGCATTCACCTCCTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CACTTGTGCTGGGGAATCTCCATTATTGAGCCCTCTTaGTTGGCTCCTAGGCAGCAGCGACCTGGTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLCWGISIIEPS*LAPRQQRPGCC Trigger: GCAGCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CGCTGGTGCCACAACACAGCACTGCTGGGGAAATCTTaGTCCCATTCATTTAGGCAGGGGGTTGGTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RWCHNTALLGKS*SHSFRQGVGTG Trigger: CCCAGTACCAACCCCCTGCCTAAATGAATGGGACCAAGATTTCCCCAGCAGTGCTGTGTTGTGGCACCAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CAAACCAGGCCATTGTCTCACCTCCTCTCTTTCCTGTaGATGGCCTGGCACCCTTTCCAGACCTGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QTRPLSHLLSFL*MAWHPFQTWVL Trigger: AAGGACCCAGGTCTGGAAAGGGTGCCAGGCCATCCACAGGAAAGAGAGGAGGTGAGACAATGGCCTGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGAGGGGCTGCAGCAAAGGATaGTGTCCCTACAAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSFWVKARLTRGQWFGLRGCSKG*CPYKRL Trigger: CAGCCTTTTGTAGGGACACAATCCTTTGCTGCAGCC...CCTCAGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGGTGAATCAAAGGCTCTaGTGTGGGGCTCCTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLCPFPGRPSLWGHRLPKVNQRL*CGAPAQ Trigger: TTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCAC...CTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGATGCTTTCGTTGTTGGTaGTCTCCCAGGGTGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRCFRCW*SPRVRP Trigger: AGGTCTCACCCTGGGAGACAACCAACAACGAAAGCA...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | TTGAGTTTTACTCACTTTGTCCTCTTGGCTGGTAACTaGTGCTCTCCCAGGGCCCTGCGCCTTACGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSFTHFVLLAGN*CSPRALRLTLV Trigger: CACCAGCGTAAGGCGCAGGGCCCTGGGAGAGCAGCAGTTACCAGCCAAGAGGACAAAGTGAGTAAAACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | CTCACTGACCAACCAATGTCACCTGCTTTGCCCCACTaGTCTGTCTACTCCTTTCCATTAGCCAGACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LTDQPMSPALPH*SVYSFPLARLA Trigger: GGCCAGTCTGGCTAATGGAAAGGAGTAGACAGAGCAGTGGGGCAAAGCAGGTGACATTGGTTGGTCAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | GGAAGGATAGACCTTCTCTTTGTCTCTACTGGCAAGTaGCCCCCAAACTTGGGTGTCCCTGACACCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GRIDLLFVSTGK*PPNLGVPDTQH Trigger: GTGTTGGGTGTCAGGGACACCCAAGTTTGGGGGGCACTTGCCAGTAGAGACAAAGAGAAGGTCTATCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | ACTTGCCCGGACACTCACTGTTCCTTCCAAAGGGACTaGTTTGGTCTTCCTGCCCTCTGTCCCTTTAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TCPDTHCSFQRD*FGLPALCPFRL Trigger: CAACCTAAAGGGACAGAGGGCAGGAAGACCAAAGCAGTCCCTTTGGAAGGAACAGTGAGTGTCCGGGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | TGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTTaGCTCCTAGGCAGCAGCGACCTGGTTGCTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CAGESPLLSPLG*LLGSSDLVAAF Trigger: AAATGCAGCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CAAACTTGGGTGTCCCTGACACCCAACACATTCCCTTaGGATTCTAGGACCACTCCCAGCCCTCAAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: QTWVSLTPNTFP*DSRTTPSPQTP Trigger: AGGTGTTTGAGGGCTGGGAGTGGTCCTAGAATCCCAAGGGAATGTGTTGGGTGTCAGGGACACCCAAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGATTGAGCCCTCTTGGTaGGCTCCTAGGCAGCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LYFLVIPFALCGGWGIAKIEPSW*APRQQR Trigger: TCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAAT...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | GCCCTAAGGTGGCCAAAGTTGGTCAAGTCTTTGAAGTaGCCACTAGATGGCGATAGAGATGAGTTCGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALRWPKLVKSLK*PLDGDRDEFAC Trigger: GCAGGCGAACTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCACCTTAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCTCTTCTCACTTGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTTGCAGAGTTCCAAAGCTTaGAGGGCAGGCGGTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LASSHLCWGISIIEPSWLQSSKA*RAGGLL Trigger: AAGCAAACCGCCTGCCCTCAAAGCTTTGGAACTCTG...CAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGATCGCTATTGCTTTGGTaGTACATAAGGCTAGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRSLLLW*YIRLVD Trigger: GTCCACTAGCCTTATGTACAACCAAAGCAATAGCGA...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCATTATTGAGCCCTCTTGGTTGGCTCCTAGGCAGCAGCGACCTGGTTGCGCTGTGACAGCTCTGTaGGCTGTTTTGATTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ISIIEPSWLAPRQQRPGCAVTAL*AVLIWS Trigger: AGACCAAATCAAAACAGCCAACAGAGCTGTCACAGC...GCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | GGCTGTGACAGCTCTGTTGGCTGTTTTGATTTGGTCTaGGGCAGAATCTGTCTCCTCCCAGATGGGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCDSSVGCFDLV*GRICLLPDGFR Trigger: CCTAAACCCATCTGGGAGGAGACAGATTCTGCCTCAGACCAAATCAAAACAGCCAACAGAGCTGTCACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | CTGCTAGAGCCAATGTTTATTGTCATACAAGCCTGGTaGAGCTCTGAGAAGAGCCCGCTGACACCAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLEPMFIVIQAW*SSEKSPLTPVW Trigger: CCAAACTGGTGTCAGCGGGCTCTTCTCAGAGCTGCACCAGGCTTGTATGACAATAAACATTGGCTCTAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | TTGCTGGCTGTGACAGCTCTGTTGGCTGTTTTGATTTaGTCTGAGGCAGAATCTGTCTCCTCCCAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLAVTALLAVLI*SEAESVSSQMG Trigger: ACCCATCTGGGAGGAGACAGATTCTGCCTCAGACCAAATCAAAACAGCCAACAGAGCTGTCACAGCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CGGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTaGGGCCATAGACTCCCGAAGCTATTAATATCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLLCPFPGRPSL*GHRLPKLLISW Trigger: CCAAGATATTAATAGCTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTACACAAGTGTGTTTGCACAAACCCTTGGGAGCTAGCTGTCTCTCACTGACCGGGGAATCTCCATTATaGAGCCCTCTTGGTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FTQVCLHKPLGASCLSLTGESPL*SPLGWL Trigger: GAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCC...GGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | AACGGACCCCTGTCACAACCTCTTCACATTTACATGTaGATCAAAGGCTCTTGTGTGGGGCTCCTGCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NGPLSQPLHIYM*IKGSCVGLLPK Trigger: TTTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCACATGTAAATGTGAAGAGGTTGTGACAGGGGTCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | CCTCTGCTAGCCCATGCTGGCTTCTTTACACCAGCCTaGCACCCACAAGTTTACACAAGTGTGTTTGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PLLAHAGFFTPA*HPQVYTSVFAQ Trigger: TTGTGCAAACACACTTGTGTAAACTTGTGGGTGTCAGGCTGGTGTAAAGAAGCCAGCATGGGCTAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | TTTACATGTGAATCAAAGGCTCTTGTGTGGGGCTCCTaGCCAAAGCCAGAAGGGTCATCTCTCACTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FTCESKALVWGS*PKPEGSSLTRA Trigger: TGCTCTAGTGAGAGATGACCCTTCTGGCTTTGGGCAGGAGCCCCACACAAGAGCCTTTGATTCACATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR GCA 72 bp | TCCTTTCCATTAGCCAGACTGGCCTCTTCTCACTTGTaGTGGGGAATCTCCATTATTGAGCCCTCTTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SFPLARLASSHL*WGISIIEPSWL Trigger: CAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCAGTCTGGCTAATGGAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | TCATACAAGCCTGGTGCAGCTCTGAGAAGAGCCCGCTaGCACCAGTTTGGATTAGAAGCCATTATCGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: SYKPGAALRRAR*HQFGLEAIIAI Trigger: TATAGCGATAATGGCTTCTAATCCAAACTGGTGTCAGCGGGCTCTTCTCAGAGCTGCACCAGGCTTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CTTTGGGGCCATAGACTCCCGAAGCTATTAATATCTTaGCCATCCCTGCCTAGAGCAGGGTGTTTAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LWGHRLPKLLIS*PSLPRAGCLMT Trigger: AGTCATTAAACACCCTGCTCTAGGCAGGGATGGCCAAGATATTAATAGCTTCGGGAGTCTATGGCCCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | CAAGATATAGAATATCTGAGGCACGACCAGGGGTTCTaGAAAGCTGGGTTCAGCATCTGCCTCTACAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: QDIEYLRHDQGF*KAGFSICLYND Trigger: GTCATTGTAGAGGCAGATGCTGAACCCAGCTTTCCAGAACCCCTGGTCGTGCCTCAGATATTCTATATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | CCTCCTAACTCTGCTCGTCCTCTCTTGAACACACTTTaGGTTTTACTCACTTTGTCCTCTTGGCTGGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: PPNSARPLLNTL*VLLTLSSWLVT Trigger: AGTTACCAGCCAAGAGGACAAAGTGAGTAAAACTCAAAGTGTGTTCAAGAGAGGACGAGCAGAGTTAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR TCA 72 bp | TTAGCCTCTCACCTCCTAACTCTGCTCGTCCTCTCTTaGACACACTTTGAGTTTTACTCACTTTGTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LASHLLTLLVLS*THFEFYSLCPL Trigger: AAGAGGACAAAGTGAGTAAAACTCAAAGTGTGTTCAAGAGAGGACGAGCAGAGTTAGGAGGTGAGAGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CCA 72 bp | GCTTTTATGTCAGACATAATCACTCTCCACAGGAACTaGAGACTGAGGGTGGCAATAGCATCTATGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: AFMSDIITLHRN*RLRVAIASMVM Trigger: CATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGAGTGATTATGTCTGACATAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCCAGGGCCCTGCGCCTTACGCTGGTGCCACAACACAGCACTGCTGGGGACTCCTGGTGTGGGCTaGCTGCCCGGCTGCCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPGPCALRWCHNTALLGTPGVG*LPGCPR Trigger: CCGCGGGCAGCCGGGCAGCCAGCCCACACCAGGAGT...CCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCCAGGGCCCTGCGCCTTACGCTGGTGCCACAACACAGCACTGCTGGGGCCTCCGCTTGGAAGCTaGAGGAGCGGCGCGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALPGPCALRWCHNTALLGPPLGS*RSGARS Trigger: CGAGCGCGCGCCGCTCCTCCAGCTTCCAAGCGGAGG...CCCCAGCAGTGCTGTGTTGTGGCACCAGCGTAAGGCGCAGGGCCCTGGGAGAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTGGAGCCAGCGGCGTCGCTGCAGACCTCTGCTCCAGGGGCTGGCGTGGGGTGGCCGTAGCTTCTaGACCAGGATTCGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGWSQRRRCRPLLQGLAWGGRSF*TRIRMM Trigger: CATCATCCGAATCCTGGTTCAGAAGCTACGGCCACC...CCACGCCAGCCCCTGGAGCAGAGGTCTGCAGCGACGCCGCTGGCTCCAGCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAGGCGCGCGCTCGGGCTaGCGCGGGTCAGCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRGARSG*RGSAWT Trigger: TGTCCATGCTGACCCGCGTCAGCCCGAGCGCGCGCC...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | GGCAATTCCATCCTGAGGGAGGACCGCAACACAGCTGTGATCCCCAAACTGAAAGCAGGCGAGGGCTCCTaGCAGCACGCAGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNSILREDRNTAVIPKLKAGEGS*QHAEPA Trigger: CGCTGGCTCTGCGTGCTGGCAGGAGCCCTCGCCTGC...TTTCAGTTTGGGGATCACAGCTGTGTTGCGGTCCTCCCTCAGGATGGAATTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | ATCTCCATTATTGAGCCCTCTTGGTTGGCTCCTAGGCAGCAGCGACCTGGTTGCCAGCCCAGGACGCCCTaGAGATGCCAACGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISIIEPSWLAPRQQRPGCQPRTP*RCQRRH Trigger: GTGGCGGCGTTGGCATCTGCAGGGCGTCCTGGGCTG...GCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | GCTAGTGGACTGGTCCTACTTGATGGACAAAGTCACTaGGTGAGCACGGGCAGGGCTGCCTTCTCCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLVLLDGQSH*VSTGRAAFSPP Trigger: GGGTGGGGAGAAGGCAGCCCTGCCCGTGCTCACCAAGTGACTTTGTCCATCAAGTAGGACCAGTCCACTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGACGTCGCAGCTCTGCCTaGACCTCGCCATTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRRRSSA*TSPLRK Trigger: CTTCCTCAATGGCGAGGTGCAGGCAGAGCTGCGACG...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGGAGGACCGCAACACAGCTGTGATCCCCAAACTGAAACTCCAGGTCACAAACCACTGCTGCCTTaGAGCTCACCGAGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEGGPQHSCDPQTETPGHKPLLP*SSPRPQ Trigger: CTGAGGCCTCGGTGAGCTGCAAGGCAGCAGTGGTTT...GTGACCTGGAGTTTCAGTTTGGGGATCACAGCTGTGTTGCGGTCCTCCCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTTGGACACCTGTGTGCTaGACGAGACGCCGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPWTPVC*TRRRCC Trigger: GCAGCAACGGCGTCTCGTGCAGCACACAGGTGTCCA...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCACAGGAACTGGAGACTGAGGGTGGCAATAGCATCTATGGTAATGCGACCAGGGAGACCTCCGCTTaGAAGCTGGAGGAGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQELETEGGNSIYGNATRETSA*KLEERR Trigger: GCGCCGCTCCTCCAGCTTCCAAGCGGAGGTCTCCCT...GGTCGCATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | AAGGAGCCACCAGGGGCTGGGTTCCATCAGGTCCTTTaGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEPPGAGFHQVL*GQGKTHKGPVV Trigger: AACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATGGAACCCAGCCCCTGGTGGCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGGCACTCCCCAGCCGATaGGTATGTACCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCPFPGRPSLWGHRLPKALPSR*VCTPRS Trigger: ACTTCTGGGGGTACATACTCATCGGCTGGGGAGTGC...CTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGAGGCCTCAGAGCAGTaGTCTGTCTCCCCGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPEASEQ*SVSPLL Trigger: CAACAACGGGGAGACAGACCACTGCTCTGAGGCCTC...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | AATGCAGATGTTGTGCGCATGACTGGCAGAGCAGCCTaGGGTGGTGGAGTCCGATGCTGGTTCCTCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NADVVRMTGRAA*GGGVRCWFLLA Trigger: TGCAAGGAGGAACCAGCATCGGACTCCACCACCCAAGGCTGCTCTGCCAGTCATGCGCACAACATCTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAACAAGCTGTAGCCGATaGTGTAGCCGGTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRTSCSR*CSRSSL Trigger: CAGTGAAGACCGGCTACACCATCGGCTACAGCTTGT...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | TGGCCTCTTCTCACTTGTGCTGGGGAATCTCCATTATaGAGCCCTCTTGGTTGGCTCCTAGGCAGCAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPLLTCAGESPL*SPLGWLLGSSD Trigger: GTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTCTTCTCACTTGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTTGTCGTTGGCCAGCAGGTaGGGTTGTCCCACATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LASSHLCWGISIIEPSWLSLASR*GCPTSC Trigger: GCAAGATGTGGGACAACCTCACCTGCTGGCCAACGA...CAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAAGTGAGAAGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGAGGTACTCACACTCCTaGTGTGGGCTGGCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WPKLVKSLKCPLDGDRDERYSHS*CGLAAR Trigger: CCGGGCAGCCAGCCCACACCAGGAGTGTGAGTACCT...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCACAGGAACTGGAGACTGAGGGTGGCAATAGCATCTATGGTAATGCGACCGTTTCATTCTCCAGCTaGGCCTCCTCCAGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQELETEGGNSIYGNATVSFSS*ASSRHC Trigger: GCAGTGCCTGGAGGAGGCCCAGCTGGAGAATGAAAC...GGTCGCATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | TTGTGCTGGGGAATCTCCATTATTGAGCCCTCTTGGTaGGCTCCTAGGCAGCAGCGACCTGGTTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LCWGISIIEPSW*APRQQRPGCCI Trigger: AATGCAGCAACCAGGTCGCTGCTGCCTAGGAGCCAACCAAGAGGGCTCAATAATGGAGATTCCCCAGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGATATGATCCACCACAGTaGGGAGTTGATGATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRYDPPQ*GVDDGV Trigger: GACACCATCATCAACTCCTCACTGTGGTGGATCATA...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCACAGGAACTGGAGACTGAGGGTGGCAATAGCATCTATGGTAATGCGACCGAAGAAAACCACTGCTaGCTTGCAGCTCACCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQELETEGGNSIYGNATEENHC*LAAHRG Trigger: GCCTCGGTGAGCTGCAAGGCAGCAGTGGTTTTCTTC...GGTCGCATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGTAGATAAGCGCCCAGAGGCGGCAGCTCGCTATTGCTTTGGTTGTACATCTTGCTGCAGCCTGTaGTTTCATTCTCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WCVDKRPEAAARYCFGCTSCCSL*FHSPAG Trigger: CCCAGCTGGAGAATGAAACCACAGGCTGCAGCAAGA...TGTACAACCAAAGCAATAGCGAGCTGCCGCCTCTGGGCGCTTATCTACACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGAAGTGTCCCACATCTTGCTaGAGCCTGTGGTTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCPFPGRPSLWGHRLPKCPTSC*SLWFHS Trigger: AGAATGAAACCACAGGCTGCAGCAAGATGTGGGACA...CTTCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGGAGGACCGCAACACAGCTGTGATCCCCAAACTGAAACTCCAGGTCACAACTCAGTCTGTTGCTaGTCATCCATACTAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEGGPQHSCDPQTETPGHNSVCC*SSILDA Trigger: GGCATCTAGTATGGATGAGCAGCAACAGACTGAGTT...GTGACCTGGAGTTTCAGTTTGGGGATCACAGCTGTGTTGCGGTCCTCCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGGGATGGGGCCCTTTATaGTCCACCACAGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPKLVKSLKCPLDGDRDEGWGPL*STTVRS Trigger: ACTCCTCACTGTGGTGGATCATAAAGGGCCCCATCC...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGCTCCAAACAGAGGGATaGGCAGAAGTGTGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLVIPFALCGGWGIAKLQTEG*AEVWTW Trigger: CCAAGTCCACACTTCTGCTCATCCCTCTGTTTGGAG...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | CTTTCGTTGTTGGTTGTCTCCCAGGGTGAGACCTACTaGACAATAGGAAGCCCTAAGGTGGCCAAAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLVVSQGETY*TIGSPKVAKVG Trigger: ACCAACTTTGGCCACCTTAGGGCTTCCTATTGTCAAGTAGGTCTCACCCTGGGAGACAACCAACAACGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | AATGATGTCGAACCCTTGCTGGCTGTGACAGCTCTGTaGGCTGTTTTGATTTGGTCTGAGGCAGAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NDVEPLLAVTAL*AVLIWSEAESV Trigger: GACAGATTCTGCCTCAGACCAAATCAAAACAGCCAACAGAGCTGTCACAGCCAGCAAGGGTTCGACATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | TCTTGGGAGCTCAGTAATGGAGCCATGCTTTCGTTGTaGGTTGTCTCCCAGGGTGAGACCTACTTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: SWELSNGAMLSL*VVSQGETYLTI Trigger: TATTGTCAAGTAGGTCTCACCCTGGGAGACAACCAACAACGAAAGCATGGCTCCATTACTGAGCTCCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | TGTTTCCAGGTAGGGCACAGCCAAATGACCCCATCTTaGACAAGATATAGAATATCTGAGGCACGACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFQVGHSQMTPS*TRYRISEARPG Trigger: CCCTGGTCGTGCCTCAGATATTCTATATCTTGTCAAAGATGGGGTCATTTGGCTGTGCCCTACCTGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR TCA 90 bp | CTCTATTTTCTGGTTATCCCATTTGCCTTGTGTGGAGGCTGGGGCATTGCCAAGGGAAGAAGGCAAACATaGCATAGTGAACTCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLVIPFALCGGWGIAKGRRQT*HSELQT Trigger: TGTTTGGAGTTCACTATGTCATGTTTGCCTTCTTCC...CTTGGCAATGCCCCAGCCTCCACACAAGGCAAATGGGATAACCAGAAAATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCACAGGAACTGGAGACTGAGGGTGGCAATAGCATCTATGGTAATGCGACCTGTTATAGCCGTGAATaGGGGAAAACAGTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPQELETEGGNSIYGNATCYSRE*GKTVER Trigger: TCTTTCAACTGTTTTCCCCCATTCACGGCTATAACA...GGTCGCATTACCATAGATGCTATTGCCACCCTCAGTCTCCAGTTCCTGTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | CCTGTTTGCTGTGTTTTCAGGAATGATGTCGAACCCTaGCTGGCTGTGACAGCTCTGTTGGCTGTTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PVCCVFRNDVEP*LAVTALLAVLI Trigger: AATCAAAACAGCCAACAGAGCTGTCACAGCCAGCAAGGGTTCGACATCATTCCTGAAAACACAGCAAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
||
| 3UTR CAA 72 bp | ACCCACAAGTTTACACAAGTGTGTTTGCACAAACCCTaGGGAGCTAGCTGTCTCTCACTGACCAACCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: THKFTQVCLHKP*GASCLSLTNQC Trigger: ACATTGGTTGGTCAGTGAGAGACAGCTAGCTCCCAAGGGTTTGTGCAAACACACTTGTGTAAACTTGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS-3UTR TCA 90 bp | TGGCCAAAGTTGGTCAAGTCTTTGAAGTGCCCACTAGATGGCGATAGAGATGAGAGAAGAAGTTGGCCATaGCGCAATACTGGAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: WPKLVKSLKCPLDGDRDERRSWP*RNTGRK Trigger: TTTTCTTCCAGTATTGCGTCATGGCCAACTTCTTCT...CTCATCTCTATCGCCATCTAGTGGGCACTTCAAAGACTTGACCAACTTTGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 90 bp | TCATCTGCAGGTACTCACACTCCTGGTGTGGGCTGGCTGCCCGGCTaGCCGCGGGTCCGAGGGCGCAGGCGAGGGCTCCTGCCAGCACGC | + |
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Preference number: 5 (lower is better) Translates to: SSAGTHTPGVGWLPG*PRVRGRRRGLLPAR Trigger: GCGTGCTGGCAGGAGCCCTCGCCTGCGCCCTCGGACCCGCGGGCAGCCGGGCAGCCAGCCCACACCAGGAGTGTGAGTACCTGCAGATGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS TCA 90 bp | CTGTGTGCTGCACGAGACGCCGTTGCTGCCTCCCCACGGGTGTTGTaGTTTGGAGCTCCAGCCCAGGACGCCCTGCAGATGCCAACGCCG | + |
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Preference number: 5 (lower is better) Translates to: LCAARDAVAASPRVL*FGAPAQDALQMPTP Trigger: CGGCGTTGGCATCTGCAGGGCGTCCTGGGCTGGAGCTCCAAATCACAACACCCGTGGGGAGGCAGCAACGGCGTCTCGTGCAGCACACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 90 bp | TGCTGCACGAGACGCCGTTGCTGCCTCCCCACGGGTGTTGTGATTTaGAGCTCCAGCCCAGGACGCCCTGCAGATGCCAACGCCGCCACT | + |
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Preference number: 5 (lower is better) Translates to: CCTRRRCCLPTGVVI*SSSPGRPADANAAT Trigger: AGTGGCGGCGTTGGCATCTGCAGGGCGTCCTGGGCTGGAGCTCCAAATCACAACACCCGTGGGGAGGCAGCAACGGCGTCTCGTGCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS-3UTR CAA 90 bp | AGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGAGGCAGGGAGACCTCCGCTaGGAAGCTGGAGGAGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: RSFWVKARLTRGQWFGLRQGDLR*EAGGAA Trigger: CGCCGCTCCTCCAGCTTCCAAGCGGAGGTCTCCCTG...CCTCAGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS-3UTR CAA 90 bp | CATCAGGTCCTTTTGGGTCAAGGCAAGACTCACAAGGGGCCAGTGGTTTGGCCTGGCCAGCAGGTGAGGTaGTCCCACATCTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQVLLGQGKTHKGPVVWPGQQVR*SHILLQ Trigger: CTGCAGCAAGATGTGGGACAACCTCACCTGCTGGCC...AGGCCAAACCACTGGCCCCTTGTGAGTCTTGCCTTGACCCAAAAGGACCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS-3UTR CAA 90 bp | GGTTGCTCTGTCCTTTTCCTGGGAGGCCAAGTCTTTGGGGCCATAGACTCCCGACACCACAGTGAGGAGTaGATGATGGTGTCCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: GCSVLFLGGQVFGAIDSRHHSEE*MMVSQH Trigger: GTGCTGGGACACCATCATCAACTCCTCACTGTGGTG...TCGGGAGTCTATGGCCCCAAAGACTTGGCCTCCCAGGAAAAGGACAGAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 90 bp | GCTGGCAAGGGACAAGCTGTAGCCGATGGTGTAGCCGGTCTTCACTaGATCGTAGAACTCAGTCTGTTGCTGCTCATCCATACTAGATGC | + |
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Preference number: 5 (lower is better) Translates to: AGKGQAVADGVAGLH*IVELSLLLLIHTRC Trigger: GCATCTAGTATGGATGAGCAGCAACAGACTGAGTTCTACGATGCAGTGAAGACCGGCTACACCATCGGCTACAGCTTGTCCCTTGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS TCA 90 bp | TATGGGCTGCTATCATTCTTCCCAATGTCGGGTGGCCGTAGCTTCTaGACCAGGATTCGGATGATGCAGATAAACAGGATGAAGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: YGLLSFFPMSGGRSF*TRIRMMQINRMKFT Trigger: GGTGAACTTCATCCTGTTTATCTGCATCATCCGAATCCTGGTTCAGAAGCTACGGCCACCCGACATTGGGAAGAATGATAGCAGCCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | GGTACTCACACTCCTGGTGTGGGCTGGCTGCCCGGCTaGCCGCGGGTCCGAGGGCGCAGGCGAGGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GTHTPGVGWLPG*PRVRGRRRGLL Trigger: CAGGAGCCCTCGCCTGCGCCCTCGGACCCGCGGGCAGCCGGGCAGCCAGCCCACACCAGGAGTGTGAGTACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | CATCTGCAGGTACTCACACTCCTGGTGTGGGCTGGCTaGCCGGCTGCCCGCGGGTCCGAGGGCGCAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: HLQVLTLLVWAG*PAARGSEGAGE Trigger: CTCGCCTGCGCCCTCGGACCCGCGGGCAGCCGGGCAGCCAGCCCACACCAGGAGTGTGAGTACCTGCAGATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS TCA 72 bp | CCGCTTGGAAGCTGGAGGAGCGGCGCGCGCTCGGGCTaGCGCGGGTCAGCATGGACACCTGTGTGCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: PLGSWRSGARSG*RGSAWTPVCCT Trigger: CGTGCAGCACACAGGTGTCCATGCTGACCCGCGTCAGCCCGAGCGCGCGCCGCTCCTCCAGCTTCCAAGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 90 bp | GTGCTGCACGAGACGCCGTTGCTGCCTCCCCACGGGTGTTGTGATTaGGAGCTCCAGCCCAGGACGCCCTGCAGATGCCAACGCCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLHETPLLPPHGCCD*ELQPRTPCRCQRRH Trigger: GTGGCGGCGTTGGCATCTGCAGGGCGTCCTGGGCTGGAGCTCCAAATCACAACACCCGTGGGGAGGCAGCAACGGCGTCTCGTGCAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS TCA 72 bp | GCACGAGACGCCGTTGCTGCCTCCCCACGGGTGTTGTaGTTTGGAGCTCCAGCCCAGGACGCCCTGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: ARDAVAASPRVL*FGAPAQDALQM Trigger: CATCTGCAGGGCGTCCTGGGCTGGAGCTCCAAATCACAACACCCGTGGGGAGGCAGCAACGGCGTCTCGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 72 bp | TTTCTCAATCATCTGCAGGTACTCACACTCCTGGTGTaGGCTGGCTGCCCGGCTGCCCGCGGGTCCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: FLNHLQVLTLLV*AGCPAARGSEG Trigger: GCCCTCGGACCCGCGGGCAGCCGGGCAGCCAGCCCACACCAGGAGTGTGAGTACCTGCAGATGATTGAGAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | GGGTGTTGTGATTTGGAGCTCCAGCCCAGGACGCCCTaGAGATGCCAACGCCGCCACTTCCGTCGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GCCDLELQPRTP*RCQRRHFRRSS Trigger: AGAGCTGCGACGGAAGTGGCGGCGTTGGCATCTGCAGGGCGTCCTGGGCTGGAGCTCCAAATCACAACACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 72 bp | GCAGTCCAGGACTACCACCTGGCCCCAAGGGGTCGTTaGCCAGCAGGTGAGGTTGTCCCACATCTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AVQDYHLAPRGR*PAGEVVPHLAA Trigger: TGCAGCAAGATGTGGGACAACCTCACCTGCTGGCCAACGACCCCTTGGGGCCAGGTGGTAGTCCTGGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 90 bp | GCCTTGCAGCTCACCGAGGCCTCAGAGCAGTGGTCTGTCTCCCCGTaGTTGAAGAGGGCCATATCCTTGATGAAGACGGCGGTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ALQLTEASEQWSVSP*LKRAISLMKTAVAL Trigger: GAGGGCCACCGCCGTCTTCATCAAGGATATGGCCCTCTTCAACAACGGGGAGACAGACCACTGCTCTGAGGCCTCGGTGAGCTGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | TCAGCATGGACACCTGTGTGCTGCACGAGACGCCGTTaGTGCCTCCCCACGGGTGTTGTGATTTGGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SAWTPVCCTRRR*CLPTGVVIWSS Trigger: GGAGCTCCAAATCACAACACCCGTGGGGAGGCAGCAACGGCGTCTCGTGCAGCACACAGGTGTCCATGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 72 bp | GGGGTCGTTGGCCAGCAGGTGAGGTTGTCCCACATCTaGCTGCAGCCTGTGGTTTCATTCTCCAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GVVGQQVRLSHI*LQPVVSFSSWA Trigger: GGCCCAGCTGGAGAATGAAACCACAGGCTGCAGCAAGATGTGGGACAACCTCACCTGCTGGCCAACGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 90 bp | TTGCAGCTCACCGAGGCCTCAGAGCAGTGGTCTGTCTCCCCGTTGTaGAAGAGGGCCATATCCTTGATGAAGACGGCGGTGGCCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQLTEASEQWSVSPL*KRAISLMKTAVALR Trigger: CCTGAGGGCCACCGCCGTCTTCATCAAGGATATGGCCCTCTTCAACAACGGGGAGACAGACCACTGCTCTGAGGCCTCGGTGAGCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 72 bp | ACCTGGCCCCAAGGGGTCGTTGGCCAGCAGGTGAGGTaGTCCCACATCTTGCTGCAGCCTGTGGTTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: TWPQGVVGQQVR*SHILLQPVVSF Trigger: GAATGAAACCACAGGCTGCAGCAAGATGTGGGACAACCTCACCTGCTGGCCAACGACCCCTTGGGGCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 72 bp | ACCGAGGCCTCAGAGCAGTGGTCTGTCTCCCCGTTGTaGAAGAGGGCCATATCCTTGATGAAGACGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TEASEQWSVSPL*KRAISLMKTAV Trigger: CACCGCCGTCTTCATCAAGGATATGGCCCTCTTCAACAACGGGGAGACAGACCACTGCTCTGAGGCCTCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | GCAGAAGTGTGGACTTGGCCAGCCTCGAGTATGGGCTaGTATCATTCTTCCCAATGTCGGGTGGCCGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: AEVWTWPASSMG*YHSSQCRVAVA Trigger: AGCTACGGCCACCCGACATTGGGAAGAATGATAGCAGCCCATACTCGAGGCTGGCCAAGTCCACACTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 72 bp | GATGAGCAGAAGTGTGGACTTGGCCAGCCTCGAGTATaGGCTGCTATCATTCTTCCCAATGTCGGGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: DEQKCGLGQPRV*AAIILPNVGWP Trigger: CGGCCACCCGACATTGGGAAGAATGATAGCAGCCCATACTCGAGGCTGGCCAAGTCCACACTTCTGCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 72 bp | GCCATGACGCAATACTGGAAGAAAACCACTGCTGCCTaGCAGCTCACCGAGGCCTCAGAGCAGTGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AMTQYWKKTTAA*QLTEASEQWSV Trigger: GACAGACCACTGCTCTGAGGCCTCGGTGAGCTGCAAGGCAGCAGTGGTTTTCTTCCAGTATTGCGTCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 90 bp | GCCGATGGTGTAGCCGGTCTTCACTGCATCGTAGAACTCAGTCTGTaGCTGCTCATCCATACTAGATGCCCTGTCATTCAGGCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ADGVAGLHCIVELSL*LLIHTRCPVIQAAG Trigger: GCCTGCGGCCTGAATGACAGGGCATCTAGTATGGATGAGCAGCAACAGACTGAGTTCTACGATGCAGTGAAGACCGGCTACACCATCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS GCA 72 bp | GGACAAGCTGTAGCCGATGGTGTAGCCGGTCTTCACTaGATCGTAGAACTCAGTCTGTTGCTGCTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GQAVADGVAGLH*IVELSLLLLIH Trigger: ATGGATGAGCAGCAACAGACTGAGTTCTACGATGCAGTGAAGACCGGCTACACCATCGGCTACAGCTTGTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CAA 72 bp | GTAGCCGGTCTTCACTGCATCGTAGAACTCAGTCTGTaGCTGCTCATCCATACTAGATGCCCTGTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: VAGLHCIVELSL*LLIHTRCPVIQ Trigger: CTGAATGACAGGGCATCTAGTATGGATGAGCAGCAACAGACTGAGTTCTACGATGCAGTGAAGACCGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS TCA 72 bp | CTATCATTCTTCCCAATGTCGGGTGGCCGTAGCTTCTaGACCAGGATTCGGATGATGCAGATAAACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LSFFPMSGGRSF*TRIRMMQINRM Trigger: CATCCTGTTTATCTGCATCATCCGAATCCTGGTTCAGAAGCTACGGCCACCCGACATTGGGAAGAATGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 72 bp | AAAGACCCTACGACGAGTTCAAAGACCATTTTCACCTaGGCCTTAAAGTTGTCGGGGAAGAAGGCAAACATG | + |
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Preference number: 6 (lower is better) Translates to: KDPTTSSKTIFT*ALKLSGKKANM Trigger: CATGTTTGCCTTCTTCCCCGACAACTTTAAGGCCCAGGTGAAAATGGTCTTTGAACTCGTCGTAGGGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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| CDS CCA 72 bp | TTGATGATGGTGTCCCAGCACCCGAAATCCTCAAAATaGATCCTGACAATCGTCCATATCATGATGAACACA | + |
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Preference number: 6 (lower is better) Translates to: LMMVSQHPKSSK*ILTIVHIMMNT Trigger: TGTGTTCATCATGATATGGACGATTGTCAGGATCCATTTTGAGGATTTCGGGTGCTGGGACACCATCATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035115.5 |
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