Pregenerated sensors for VIPAS39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021038Ensembl transcript IDs: ENSMUST00000021426.10, ENSMUST00000072744.15, ENSMUST00000179379.9
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTaGTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATCT | + |
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Preference number: 1 (lower is better) Translates to: VREILFREAQGRMEH*SSPQQANRASTEIS Trigger: AGATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 90 bp | TCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTaGAGTGGTCACTTTTCTCTGAGCACAGGCATCTTGCCCAGGATG | + |
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Preference number: 1 (lower is better) Translates to: SLPPRDTCGLVPTCF*SGHFSLSTGILPRM Trigger: CATCCTGGGCAAGATGCCTGTGCTCAGAGAAAAGTGACCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 90 bp | CAGCTGAAAGGACAGAGGAATGTCACTGCCACCCCGAGACACTTGTaGCTTAGTCCCGACGTGTTTCTGGAGTGGTCACTTTTCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QLKGQRNVTATPRHL*LSPDVFLEWSLFSE Trigger: CTCAGAGAAAAGTGACCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCCTCTGTCCTTTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 90 bp | ACAATGTGTAGGAAGTGTCTGTCATTGATGAGTGGCCCTGTGTCTTaGGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGAT | + |
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Preference number: 1 (lower is better) Translates to: TMCRKCLSLMSGPVS*ELGSGFQQVLSNTD Trigger: ATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTCATCAATGACAGACACTTCCTACACATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 90 bp | TTGAGAGTCCGAGCCTTTAGCTACTGGCCTGTAAGTAATGTCCCCTaGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LRVRAFSYWPVSNVP*TDQSEDTCAQRLVS Trigger: AGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCCAGGGGACATTACTTACAGGCCAGTAGCTAAAGGCTCGGACTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CAA 90 bp | CCGACGTGTTTCTGGAGTGGTCACTTTTCTCTGAGCACAGGCATCTaGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PTCFWSGHFSLSTGI*PRMGPHLSTGTGAE Trigger: CTCTGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCTCAGAGAAAAGTGACCACTCCAGAAACACGTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGGCATCTTGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCACTGGACAGATCAGTCTaGAGATACATGTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: STGILPRMGPHLSTGTGALDRSV*RYMCSK Trigger: CTTTGAGCACATGTATCTTCAGACTGATCTGTCCAG...TGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR GCA 90 bp | GACGTGCTGAAGCAGATGGCTCACCACCTGGACAGTGTGCAGGTGTCAGAGGGAAGAGTGAAATGCCTATaGCCAACACCAGGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DVLKQMAHHLDSVQVSEGRVKCL*PTPGSG Trigger: CCCAGAACCTGGTGTTGGGCATAGGCATTTCACTCT...TCCCTCTGACACCTGCACACTGTCCAGGTGGTGAGCCATCTGCTTCAGCACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACCACCTGGACAGTGTaGAGGTGTCAGAGGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNTTWTV*RCQRDP Trigger: AGGGTCCCTCTGACACCTGCACACTGTCCAGGTGGT...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCGCAGAGCATCTTTCTTaGGAGTCCGAGCCTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPAEHLS*ESEPLA Trigger: AGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGC...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | GACGTGCTGAAGCAGATGGCTCACCACCTGGACAGTGTGCAGGTGTCAGAGGGACTGACTCCTTTAGAGTaGAATGCCTATGCCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: DVLKQMAHHLDSVQVSEGLTPLE*NAYAQH Trigger: GTGTTGGGCATAGGCATTTCACTCTAAAGGAGTCAG...TCCCTCTGACACCTGCACACTGTCCAGGTGGTGAGCCATCTGCTTCAGCACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGAGTCCCGACGTGTTTCTaGAGTGGTCACTTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AEWNTAQVPSRLTGPLRRVPTCF*SGHFSL Trigger: CAGAGAAAAGTGACCACTCCAGAAACACGTCGGGAC...TCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTACCACCTGGACAGTGTaGAGGTGTCAGAGGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: TGPLRRYLNKVLLVAASGTTWTV*RCQRDP Trigger: AGGGTCCCTCTGACACCTGCACACTGTCCAGGTGGT...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATGCAGAGCATCTTTCTTaGGAGTCCGAGCCTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYAEHLS*ESEPLA Trigger: AGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGC...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACCTGACTCCTTTAGAGTaGAATGCCTATGCCCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNLTPLE*NAYAQH Trigger: GTGTTGGGCATAGGCATTTCACTCTAAAGGAGTCAG...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGATTTTTGCCTaGAAGAGCGCTCCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TGPLRRYLNKVLLVAASGEMIFA*KSAPAL Trigger: CAGTGCTGGAGCGCTCTTTCAGGCAAAAATCATTTC...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTCTGGACAGATCAGTCTaGAGATACATGTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TGPLRRYLNKVLLVAASGLDRSV*RYMCSK Trigger: CTTTGAGCACATGTATCTTCAGACTGATCTGTCCAG...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGCCCAACACCAGGTTCTaGGTAAGAACAGCTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLRRYLNKVLLVAASGEMPNTRF*VRTAER Trigger: CCTTTCAGCTGTTCTTACCCAGAACCTGGTGTTGGG...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAGCATCTTTCTTGAGAGTCCGAGCCTTTAGCTACTGGCCTGTAAGTAATCTGGACAGATCAGTCTaGAGATACATGTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CRASFLRVRAFSYWPVSNLDRSV*RYMCSK Trigger: CTTTGAGCACATGTATCTTCAGACTGATCTGTCCAG...ATTACTTACAGGCCAGTAGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGAGAGTGAAATGCCTATaGCCAACACCAGGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: STGESEFHVRLCLTQKQKRVKCL*PTPGSG Trigger: CCCAGAACCTGGTGTTGGGCATAGGCATTTCACTCT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGCTGAGCACAGGCATCTaGCCCAGGATGGGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VTATPRHLWLSPDVFLEWLSTGI*PRMGPH Trigger: GTGGGGGCCCATCCTGGGCAAGATGCCTGTGCTCAG...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR GCA 72 bp | GCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTaGAGAGCATCTTTCTTGAGAGTCCGAGCCTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: AQDGPPPFHRHR*RASFLRVRAFS Trigger: GCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR GCA 72 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTaGTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACG | + |
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Preference number: 3 (lower is better) Translates to: ILFREAQGRMEH*SSPQQANRAST Trigger: CGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTCTGAGCACAGGCATCTaGCCCAGGATGGGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TGPLRRYLNKVLLVAASGLSTGI*PRMGPH Trigger: GTGGGGGCCCATCCTGGGCAAGATGCCTGTGCTCAG...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CAA 90 bp | GACGTGCTGAAGCAGATGGCTCACCACCTGGACAGTGTGCAGGTGTCAGAGGGAAGGAAGTGTCTGTCATaGATGAGTGGCCCTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: DVLKQMAHHLDSVQVSEGRKCLS*MSGPVS Trigger: AGACACAGGGCCACTCATCAATGACAGACACTTCCT...TCCCTCTGACACCTGCACACTGTCCAGGTGGTGAGCCATCTGCTTCAGCACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 72 bp | GGACAGAGGAATGTCACTGCCACCCCGAGACACTTGTaGCTTAGTCCCGACGTGTTTCTGGAGTGGTCACTT | + |
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Preference number: 3 (lower is better) Translates to: GQRNVTATPRHL*LSPDVFLEWSL Trigger: AAGTGACCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCCTCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 72 bp | CCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTaGAGTGGTCACTTTTCTCTGAGCACAGGCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: PRDTCGLVPTCF*SGHFSLSTGIL Trigger: CAAGATGCCTGTGCTCAGAGAAAAGTGACCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CAA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACCTGTGTCTTGAGAACTaGGGTCTGGTTTCCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNLCLEN*GLVSSR Trigger: CCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAG...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | AGGAAGTGTCTGTCATTGATGAGTGGCCCTGTGTCTTaGGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RKCLSLMSGPVS*ELGSGFQQVLS Trigger: GCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTCATCAATGACAGACACTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | GTAAGACTGTGTCTGACACAGAAACAGAAGACGTGCTaGAGCAGATGGCTCACCACCTGGACAGTGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: VRLCLTQKQKTC*SRWLTTWTVCR Trigger: CCTGCACACTGTCCAGGTGGTGAGCCATCTGCTTCAGCACGTCTTCTGTTTCTGTGTCAGACACAGTCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR CCA 72 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTaGTTTCTGTCCCTAAACCAGCAGGCACTGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GQISLKIHVLKG*FLSLNQQALPV Trigger: CACAGGCAGTGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTAGGAAGTGTCTGTCATaGATGAGTGGCCCTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TGPLRRYLNKVLLVAASGRKCLS*MSGPVS Trigger: AGACACAGGGCCACTCATCAATGACAGACACTTCCT...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | ACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTaGTATCCCTTTCCGAGGCCCCTGAAGAGTCAATTT | + |
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Preference number: 3 (lower is better) Translates to: TWVWFPAGPEQY*YPFPRPLKSQF Trigger: AAATTGACTCTTCAGGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | CTACTTGTGGCTGCTTCTGGTGAAATGATTTTTGCCTaGAAGAGCGCTCCAGCACTGGTGAATCTGAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LLVAASGEMIFA*KSAPALVNLNS Trigger: GGAATTCAGATTCACCAGTGCTGGAGCGCTCTTTCAGGCAAAAATCATTTCACCAGAAGCAGCCACAAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | ATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTaGAATGATTTTTGCCTGAAAGAGCGCTCCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: ISKQGATCGCFW*NDFCLKERSST Trigger: AGTGCTGGAGCGCTCTTTCAGGCAAAAATCATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| 3UTR TCA 72 bp | AAGAGTCAATTTAGTTCTGTTCTGACTCCTTTAGAGTaGAATGCCTATGCCCAACACCAGGTTCTGGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: KSQFSSVLTPLE*NAYAQHQVLGK Trigger: CTTACCCAGAACCTGGTGTTGGGCATAGGCATTTCACTCTAAAGGAGTCAGAACAGAACTAAATTGACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGCACAGGCATCTTGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCAAGCTGCAGCTTATCCTaGAGGGAGCGGAAGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: STGILPRMGPHLSTGTGASCSLS*RERKRS Trigger: AGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCAGCT...TGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGGATATCAGTCTGCCCTaGAGACTCCAGGTGCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: VTATPRHLWLSPDVFLEWDISLP*RLQVPV Trigger: GACCGGCACCTGGAGTCTTCAGGGCAGACTGATATC...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAATCCAGGCTCTCAGCTTaGCACGCGCAGCCAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQSRLSA*HAQPRL Trigger: CAGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGA...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGCACAGGCATCTTGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCAGCATCAGAAAGGGACTaGAAACTCCCAGGTCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: STGILPRMGPHLSTGTGAASERD*KLPGLV Trigger: AACTAGACCTGGGAGTTTCCAGTCCCTTTCTGATGC...TGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGAGGCCTCCCCAGCTCTaGAGCATAACTTTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VTATPRHLWLSPDVFLEWRPPQL*SITFGR Trigger: CCTGCCAAAAGTTATGCTCCAGAGCTGGGGAGGCCT...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GGAATGTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGCTGCAGCTTATCCTaGAGGGAGCGGAAGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GMSLPPRDTCGLVPTCFWSCSLS*RERKRS Trigger: AGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCAGCT...CCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACTCCAGGCTCTCAGCTTaGCACGCGCAGCCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLKGWFLSLNQQALPVNDSRLSA*HAQPRL Trigger: CAGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGA...GTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| 3UTR CAA 72 bp | TTCTGGAGTGGTCACTTTTCTCTGAGCACAGGCATCTaGCCCAGGATGGGCCCCCACCTTTCCACAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FWSGHFSLSTGI*PRMGPHLSTGT Trigger: GGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCTCAGAGAAAAGTGACCACTCCAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCGTTCTCCAGTCCAGCTaGCTCTCTCCAGGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPVLQSS*LSPGHR Trigger: ACGATGACCTGGAGAGAGTCAGCTGGACTGGAGAAC...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGAAGGCCTCCCCAGCTCTaGAGCATAACTTTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEWNTAQVPSRLTGPLRRRPPQL*SITFGR Trigger: CCTGCCAAAAGTTATGCTCCAGAGCTGGGGAGGCCT...TCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAAAGCTGCAGCTTATCCTaGAGGGAGCGGAAGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQSCSLS*RERKRS Trigger: AGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCAGCT...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACGATATCAGTCTGCCCTaGAGACTCCAGGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKGWFLSLNQQALPVNDDISLP*RLQVPV Trigger: GACCGGCACCTGGAGTCTTCAGGGCAGACTGATATC...GTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGTATGCAAGCAACTGCTaGCGATCCTTCAGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILFREAQGRMEHCSSPQQYASNC*RSFRSR Trigger: CCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATA...CTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCTATGCAAGCAACTGCTaGCGATCCTTCAGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPYASNC*RSFRSR Trigger: CCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATA...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGCGGAAGATATCAGTCTaGCCTGAAGACTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMSLPPRDTCGLVPTCFWRKISV*PEDSRC Trigger: GCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCG...CCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGACGGAAGATATCAGTCTaGCCTGAAGACTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEWNTAQVPSRLTGPLRRRKISV*PEDSRC Trigger: GCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCG...TCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATGTTCTCCAGTCCAGCTaGCTCTCTCCAGGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYVLQSS*LSPGHR Trigger: ACGATGACCTGGAGAGAGTCAGCTGGACTGGAGAAC...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAACGGAAGATATCAGTCTaGCCTGAAGACTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQRKISV*PEDSRC Trigger: GCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCG...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGTTCTTCCATCGAATTTaGGAGCTGCTGAGAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTATPRHLWLSPDVFLEWFFHRI*ELLRMA Trigger: CGCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAA...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGCTGGAGCATAACTTTTaGCAGGTGTGTCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAEWNTAQVPSRLTGPLRLEHNF*QVCLTE Trigger: CTCTGTCAGACACACCTGCCAAAAGTTATGCTCCAG...CCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACAGGCCTCCCCAGCTCTaGAGCATAACTTTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNRPPQL*SITFGR Trigger: CCTGCCAAAAGTTATGCTCCAGAGCTGGGGAGGCCT...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACAGGCTCACGTGTAGATGTCTCAGTGCGACCTaGCGTACCTCCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLNQQALPVNDRLTCRCLSAT*RTSSSR Trigger: TCGAGAGCTGGAGGTACGCCAGGTCGCACTGAGACA...TCTACACGTGAGCCTGTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGATTTCCACAACTCGATaGAAGCCAATGGGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTATPRHLWLSPDVFLEWISTTR*KPMGAL Trigger: GAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAAT...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| 3UTR CAA 72 bp | CCACCTTTCCACAGGCACCGGTGCAGAGCATCTTTCTaGAGAGTCCGAGCCTTTAGCTACTGGCCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFHRHRCRASF*RVRAFSYWPVS Trigger: ACTTACAGGCCAGTAGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGCACCGGTGCCTGTGGAAAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAATTTGGCAGGTGTGTCTaGCAGAGCATCAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQFGRCV*QSIRKG Trigger: TCCCTTTCTGATGCTCTGTCAGACACACCTGCCAAA...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | GTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACTATGCAAGCAACTGCTaGCGATCCTTCAGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKGWFLSLNQQALPVNDYASNC*RSFRSR Trigger: CCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATA...GTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGATGACGTTCCCATCATaGATGCTTACTGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILFREAQGRMEHCSSPQQMTFPS*MLTASS Trigger: AGAGGAGGCAGTAAGCATGCATGATGGGAACGTCAT...CTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCCAGGAAGATCAGAACTaGAGTGATGACGTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPQEDQN*SDDVPI Trigger: GATGGGAACGTCATCACTGCAGTTCTGATCTTCCTG...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGGCATCAGAAAGGGACTaGAAACTCCCAGGTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSLPPRDTCGLVPTCFWASERD*KLPGLV Trigger: AACTAGACCTGGGAGTTTCCAGTCCCTTTCTGATGC...CCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCTGGGTGCTCTCTTCTTaGTGTAACCCAACCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPWVLSS*CNPTSS Trigger: AGAACTGGTTGGGTTACACCAAGAAGAGAGCACCCA...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGATTTCCACAACTCGATaGAAGCCAATGGGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMSLPPRDTCGLVPTCFWISTTR*KPMGAL Trigger: GAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAAT...CCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACTTTGGCAGGTGTGTCTaGCAGAGCATCAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNFGRCV*QSIRKG Trigger: TCCCTTTCTGATGCTCTGTCAGACACACCTGCCAAA...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACCGCAGCGTCTTCTGCTaGAAATGGCAAACCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNRSVFC*KWQTNA Trigger: TGCATTGGTTTGCCATTTTCAGCAGAAGACGCTGCG...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGATTGACATATTCCTaGAGTATCTGGACAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMSLPPRDTCGLVPTCFWRLTYS*SIWTGA Trigger: TGCCCCTGTCCAGATACTGCAGGAATATGTCAATCT...CCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGACATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGTACTTTGCTCCTGTATaGAAGCAACTGCTGACGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILFREAQGRMEHCSSPQQYFAPV*KQLLTI Trigger: GATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTA...CTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCATGTCTCAGTGCGACCTaGCGTACCTCCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLKIHVLKGWFLSLNQQACLSAT*RTSSSR Trigger: TCGAGAGCTGGAGGTACGCCAGGTCGCACTGAGACA...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAATGGGTGCTCTCTTCTTaGTGTAACCCAACCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQWVLSS*CNPTSS Trigger: AGAACTGGTTGGGTTACACCAAGAAGAGAGCACCCA...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACTCCCAGCAGTCTCTTTaGTGGACCATGAGATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNSQQSL*WTMRYF Trigger: GAAGTATCTCATGGTCCATCAAAGAGACTGCTGGGA...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGGATATCAGTCTGCCCTaGAGACTCCAGGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRRYLNKVLLVAASGEMDISLP*RLQVPV Trigger: GACCGGCACCTGGAGTCTTCAGGGCAGACTGATATC...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATCAGGAAGATCAGAACTaGAGTGATGACGTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYQEDQN*SDDVPI Trigger: GATGGGAACGTCATCACTGCAGTTCTGATCTTCCTG...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACATGGAAGCCAATGGGTaGTCTCTTCTTGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNMEANG*SLLGVT Trigger: GGTTACACCAAGAAGAGAGCACCCATTGGCTTCCAT...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATATGGAAGCCAATGGGTaGTCTCTTCTTGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYMEANG*SLLGVT Trigger: GGTTACACCAAGAAGAGAGCACCCATTGGCTTCCAT...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGTGTCTCAGTGCGACCTaGCGTACCTCCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRRYLNKVLLVAASGEMCLSAT*RTSSSR Trigger: TCGAGAGCTGGAGGTACGCCAGGTCGCACTGAGACA...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGTCCAGGCTCTCAGCTTaGCACGCGCAGCCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKSRLSA*HAQPRL Trigger: CAGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGA...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CCA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGTCAATGACGACATCATaGCACTTGAACTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTATPRHLWLSPDVFLEWSMTTS*HLNLVA Trigger: AGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGA...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGCATCTTTCTTGAGAGTCCGAGCCTTTAGCTACTGGCCTGTAAGTAATGTTCTCCAGTCCAGCTaGCTCTCTCCAGGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: CRASFLRVRAFSYWPVSNVLQSS*LSPGHR Trigger: ACGATGACCTGGAGAGAGTCAGCTGGACTGGAGAAC...ATTACTTACAGGCCAGTAGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTTTTGGCAGGTGTGTCTaGCAGAGCATCAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGPLRRYLNKVLLVAASGFGRCV*QSIRKG Trigger: TCCCTTTCTGATGCTCTGTCAGACACACCTGCCAAA...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATGGGGCACTGTTCTTGTaGAAAATTTCCACAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYGALFL*KISTTR Trigger: TCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCC...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACTACTTTGCTCCTGTATaGAAGCAACTGCTGACGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNYFAPV*KQLLTI Trigger: GATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTA...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | TTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACAGGCTCACGTGTAGATTCTTCCATCGAATTTaGGAGCTGCTGAGAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLNQQALPVNDRLTCRFFHRI*ELLRMA Trigger: CGCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAA...TCTACACGTGAGCCTGTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | TTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACAGGCTCACGTGTAGAGCATCAGAAAGGGACTaGAAACTCCCAGGTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLNQQALPVNDRLTCRASERD*KLPGLV Trigger: AACTAGACCTGGGAGTTTCCAGTCCCTTTCTGATGC...TCTACACGTGAGCCTGTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATCAATGACGACATCATaGCACTTGAACTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEWNTAQVPSRLTGPLRRSMTTS*HLNLVA Trigger: AGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGA...TCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | GTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACCTCTATCTAGGAACCTaGAGAGATCTAAAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKGWFLSLNQQALPVNDLYLGT*RDLKAA Trigger: AGCTGCTTTTAGATCTCTTCAGGTTCCTAGATAGAG...GTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGGTTGCACTGTATCACTaGGGCTCCAGTCATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRRYLNKVLLVAASGEMVALYH*GSSHCC Trigger: ACAGCAATGACTGGAGCCTCAGTGATACAGTGCAAC...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072744.15 |
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| CDS-3UTR CCA 90 bp | GCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGACACATACTGTTTGTCTaGGATCTTGAATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEWNTAQVPSRLTGPLRRHILFV*DLECFL Trigger: AAGAAAACATTCAAGATCCCAGACAAACAGTATGTG...TCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACTCCCAGCAGTCTCTTTaGTGGACCATGAGATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQISLKIHVLKGWFLSLNSQQSL*WTMRYF Trigger: GAAGTATCTCATGGTCCATCAAAGAGACTGCTGGGA...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTCATCTTCCACCAGATTaGCATATTCCTGCAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPLRRYLNKVLLVAASGHLPPD*HIPAVS Trigger: AGATACTGCAGGAATATGTCAATCTGGTGGAAGATG...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGGAAGATCAGAACTaGAGTGATGACGTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GQISLKIHVLKGWFLSLNQEDQN*SDDVPI Trigger: GATGGGAACGTCATCACTGCAGTTCTGATCTTCCTG...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGATGGAAGCCAATGGGTaGTCTCTTCTTGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLRRYLNKVLLVAASGEMMEANG*SLLGVT Trigger: GGTTACACCAAGAAGAGAGCACCCATTGGCTTCCAT...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCAAGATTGACATATTCCTaGAGTATCTGGACAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKIHVLKGWFLSLNQQARLTYS*SIWTGA Trigger: TGCCCCTGTCCAGATACTGCAGGAATATGTCAATCT...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACTGGGTGCTCTCTTCTTaGTGTAACCCAACCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQISLKIHVLKGWFLSLNWVLSS*CNPTSS Trigger: AGAACTGGTTGGGTTACACCAAGAAGAGAGCACCCA...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACTCTATCTAGGAACCTaGAGAGATCTAAAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKIHVLKGWFLSLNQQALYLGT*RDLKAA Trigger: AGCTGCTTTTAGATCTCTTCAGGTTCCTAGATAGAG...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGCGCAGCGTCTTCTGCTaGAAATGGCAAACCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKRSVFC*KWQTNA Trigger: TGCATTGGTTTGCCATTTTCAGCAGAAGACGCTGCG...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACATCTTCCACCAGATTaGCATATTCCTGCAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKIHVLKGWFLSLNQQAHLPPD*HIPAVS Trigger: AGATACTGCAGGAATATGTCAATCTGGTGGAAGATG...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGGGGGCACTGTTCTTGTaGAAAATTTCCACAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRRYLNKVLLVAASGEMGALFL*KISTTR Trigger: TCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCC...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACGGGGCACTGTTCTTGTaGAAAATTTCCACAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQISLKIHVLKGWFLSLNGALFL*KISTTR Trigger: TCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCC...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACTACTTTGCTCCTGTATaGAAGCAACTGCTGACGATC | + |
|
Preference number: 4 (lower is better) Translates to: GQISLKIHVLKGWFLSLNYFAPV*KQLLTI Trigger: GATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTA...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGATGACGTTCCCATCATaGATGCTTACTGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKMTFPS*MLTASS Trigger: AGAGGAGGCAGTAAGCATGCATGATGGGAACGTCAT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGCTGGAGCATAACTTTTaGCAGGTGTGTCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKLEHNF*QVCLTE Trigger: CTCTGTCAGACACACCTGCCAAAAGTTATGCTCCAG...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGATTTCCACAACTCGATaGAAGCCAATGGGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKISTTR*KPMGAL Trigger: GAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAAT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR GCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGAGATTGACATATTCCTaGAGTATCTGGACAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKRLTYS*SIWTGA Trigger: TGCCCCTGTCCAGATACTGCAGGAATATGTCAATCT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTCACATACTGTTTGTCTaGGATCTTGAATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGPLRRYLNKVLLVAASGHILFV*DLECFL Trigger: AAGAAAACATTCAAGATCCCAGACAAACAGTATGTG...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGCATCTTCCACCAGATTaGCATATTCCTGCAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKHLPPD*HIPAVS Trigger: AGATACTGCAGGAATATGTCAATCTGGTGGAAGATG...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCACACATACTGTTTGTCTaGGATCTTGAATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKIHVLKGWFLSLNQQAHILFV*DLECFL Trigger: AAGAAAACATTCAAGATCCCAGACAAACAGTATGTG...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGTCAATGACGACATCATaGCACTTGAACTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STGESEFHVRLCLTQKQKSMTTS*HLNLVA Trigger: AGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGA...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | AGCACAGGCATCTTGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCATTCCAGGCTCTCAGCTaGGCACGCGCAGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STGILPRMGPHLSTGTGAFQALS*ARAAKA Trigger: AGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGAA...TGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 90 bp | CGGGGGTGCTTCCGGAAGATATCAGTCTGCCCTGAAGACTCCAGGTaGCGGTCGTTTGCCTCGATGATGATCTGGCGCTCCAGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGCFRKISVCPEDSR*RSFASMMIWRSSRV Trigger: CACCCTGCTGGAGCGCCAGATCATCATCGAGGCAAACGACCGGCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCGGAAGCACCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCGCCCCGGCGGAGGCGTaGCACTGTATCACTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPAPAEA*HCITEA Trigger: AGCCTCAGTGATACAGTGCAACGCCTCCGCCGGGGC...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072744.15 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCTTCCAGGCTCTCAGCTaGGCACGCGCAGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPFQALS*ARAAKA Trigger: AGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGAA...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATTTCCAGGCTCTCAGCTaGGCACGCGCAGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYFQALS*ARAAKA Trigger: AGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGAA...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 90 bp | GTGATGACGTTCCCATCATGCATGCTTACTGCCTCCTCTAGGAGCTaGAGCTTATCCTGGAGGGAGCGGAAGCGCTCTAGTGAACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VMTFPSCMLTASSRS*SLSWRERKRSSEQT Trigger: GGTCTGTTCACTAGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCAGCTCCTAGAGGAGGCAGTAAGCATGCATGATGGGAACGTCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | AGCACAGGCATCTTGCCCAGGATGGGCCCCCACCTTTCCACAGGCACCGGTGCAACGACATCATGGCACTaGAACTTAGTAGCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STGILPRMGPHLSTGTGATTSWH*NLVAKF Trigger: GAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGT...TGCACCGGTGCCTGTGGAAAGGTGGGGGCCCATCCTGGGCAAGATGCCTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 90 bp | AGTGTCGTCACTAACGGCATGTTGAGAATGGAAGCTTTACGGGGGTaGTTCCGGAAGATATCAGTCTGCCCTGAAGACTCCAGGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVVTNGMLRMEALRG*FRKISVCPEDSRCR Trigger: CCGGCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCGGAAGCACCCCCGTAAAGCTTCCATTCTCAACATGCCGTTAGTGACGACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 90 bp | TTGAGAATGGAAGCTTTACGGGGGTGCTTCCGGAAGATATCAGTCTaGCCTGAAGACTCCAGGTGCCGGTCGTTTGCCTCGATGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LRMEALRGCFRKISV*PEDSRCRSFASMMI Trigger: GATCATCATCGAGGCAAACGACCGGCACCTGGAGTCTTCAGGGCAGACTGATATCTTCCGGAAGCACCCCCGTAAAGCTTCCATTCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | AGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGTCAAAAGTGAAAGCCTaGAACTTGGAGCTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAEWNTAQVPSRLTGPLRSKVKA*NLELFQ Trigger: TTGGAACAGCTCCAAGTTCAAGGCTTTCACTTTTGA...CCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCACAGGGGCACTGTTCTaGTGCAAAATTTCCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPTGALF*CKISTT Trigger: AGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGT...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGTCAAAAGTGAAAGCCTaGAACTTGGAGCTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ILFREAQGRMEHCSSPQQSKVKA*NLELFQ Trigger: TTGGAACAGCTCCAAGTTCAAGGCTTTCACTTTTGA...CTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCAATGTTTTCTTCAGGTaGATGGGACTGCTGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPNVFFR*MGLLKV Trigger: AACCTTCAGCAGTCCCATCAACCTGAAGAAAACATT...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GTCACTGCCACCCCGAGACACTTGTGGCTTAGTCCCGACGTGTTTCTGGAGTGGTGTTTGTCTGGGATCTaGAATGTTTTCTTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTATPRHLWLSPDVFLEWCLSGI*NVFFRL Trigger: CAACCTGAAGAAAACATTCAAGATCCCAGACAAACA...CCACTCCAGAAACACGTCGGGACTAAGCCACAAGTGTCTCGGGGTGGCAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGGTTTCCAGCAGGTCCTGAGCAATACTGATATCCCTTTCCGAGGCCCCACATCTTCCACCAGATaGACATATTCCTGCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GSGFQQVLSNTDIPFRGPTSSTR*TYSCSI Trigger: GATACTGCAGGAATATGTCAATCTGGTGGAAGATGT...GGGGCCTCGGAAAGGGATATCAGTATTGCTCAGGACCTGCTGGAAACCAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS TCA 90 bp | TCGGCGGATCCTTTGTCTACTTTGCTCCTGTATGCAAGCAACTGCTaGCGATCCTTCAGGTCTCGGCAAGTATCAATGACGACATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SADPLSTLLLYASNC*RSFRSRQVSMTTSW Trigger: CCATGATGTCGTCATTGATACTTGCCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTAGACAAAGGATCCGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAAAATGTTTTCTTCAGGTaGATGGGACTGCTGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQNVFFR*MGLLKV Trigger: AACCTTCAGCAGTCCCATCAACCTGAAGAAAACATT...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACACTGCTCAAGTCCCCAGCAGTGTTTGTCTGGGATCTaGAATGTTTTCTTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILFREAQGRMEHCSSPQQCLSGI*NVFFRL Trigger: CAACCTGAAGAAAACATTCAAGATCCCAGACAAACA...CTGCTGGGGACTTGAGCAGTGTTCCATTCTGCCCTGTGCCTCCCTGAACAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGGCCCTGTGTCTTGAGAACTTGGGTCTGGTTTCCAGCAGGTCCTGAGCAAACATCTTCCACCAGATaGACATATTCCTGCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: EWPCVLRTWVWFPAGPEQTSSTR*TYSCSI Trigger: GATACTGCAGGAATATGTCAATCTGGTGGAAGATGT...TTGCTCAGGACCTGCTGGAAACCAGACCCAAGTTCTCAAGACACAGGGCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGTTCTTCCATCGAATTaGCGAGCTGCTGAGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGPLRRYLNKVLLVAASGVLPSN*RAAENG Trigger: GCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAAC...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS TCA 90 bp | AGTGATAGAAGCAGGCGTAGAAGAGTGTCGTCACTAACGGCATGTTaGGAATGGAAGCTTTACGGGGGTGCTTCCGGAAGATATCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDRSRRRRVSSLTAC*EWKLYGGASGRYQS Trigger: AGACTGATATCTTCCGGAAGCACCCCCGTAAAGCTTCCATTCTCAACATGCCGTTAGTGACGACACTCTTCTACGCCTGCTTCTATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTAGGCATGTCAGGGAAATCCTGTTCAGGGAGGCACAGGGCAGAATGGAACTCAAAAGTGAAAGCCTaGAACTTGGAGCTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVGMSGKSCSGRHRAEWNSKVKA*NLELFQ Trigger: TTGGAACAGCTCCAAGTTCAAGGCTTTCACTTTTGA...GTTCCATTCTGCCCTGTGCCTCCCTGAACAGGATTTCCCTGACATGCCTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GAATGGAACACTGCTCAAGTCCCCAGCAGGCTAACAGGGCCTCTACGGAGATATAATGTTTTCTTCAGGTaGATGGGACTGCTGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EWNTAQVPSRLTGPLRRYNVFFR*MGLLKV Trigger: AACCTTCAGCAGTCCCATCAACCTGAAGAAAACATT...ATATCTCCGTAGAGGCCCTGTTAGCCTGCTGGGGACTTGAGCAGTGTTCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCAGTTCTTCCATCGAATTaGCGAGCTGCTGAGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLKIHVLKGWFLSLNQQAVLPSN*RAAENG Trigger: GCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAAC...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS GCA 90 bp | AATCTTCTCTTCCTCGGCGGATCCTTTGTCTACTTTGCTCCTGTATaGAAGCAACTGCTGACGATCCTTCAGGTCTCGGCAAGTATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NLLFLGGSFVYFAPV*KQLLTILQVSASIN Trigger: ATTGATACTTGCCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTAGACAAAGGATCCGCCGAGGAAGAGAAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTCCCTAAACCAGCAGGCACTGCCTGTGAATGACAGGCTCACGTGTAGAACGACATCATGGCACTaGAACTTAGTAGCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSLNQQALPVNDRLTCRTTSWH*NLVAKF Trigger: GAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGT...TCTACACGTGAGCCTGTCATTCACAGGCAGTGCCTGCTGGTTTAGGGACAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGCATCTTTCTTGAGAGTCCGAGCCTTTAGCTACTGGCCTGTAAGTAATGTTCTTCCATCGAATTaGCGAGCTGCTGAGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRASFLRVRAFSYWPVSNVLPSN*RAAENG Trigger: GCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAAC...ATTACTTACAGGCCAGTAGCTAAAGGCTCGGACTCTCAAGAAAGATGCTCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS GCA 90 bp | AGATTGACATATTCCTGCAGTATCTGGACAGGGGCACTGTTCTTGTaGAAAATTTCCACAACTCGATGGAAGCCAATGGGTGCTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTYSCSIWTGALFL*KISTTRWKPMGALF Trigger: GAAGAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGTCCAGATACTGCAGGAATATGTCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | GGACAGATCAGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCTCCCAGCAGTCTCTTaGATGGACCATGAGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: GQISLKIHVLKGWFLSLNLPAVS*MDHEIL Trigger: AAGTATCTCATGGTCCATCAAAGAGACTGCTGGGAG...GTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACTGATCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTGAAATGCTCCCAGCAGTCTCTTaGATGGACCATGAGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRRYLNKVLLVAASGEMLPAVS*MDHEIL Trigger: AAGTATCTCATGGTCCATCAAAGAGACTGCTGGGAG...CATTTCACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | AGTCTGAAGATACATGTGCTCAAAGGCTGGTTTCTGTCCCTAAACCAGCAGGCAACAGGGGCACTGTTCTaGTGCAAAATTTCCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: SLKIHVLKGWFLSLNQQATGALF*CKISTT Trigger: AGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGT...TGCCTGCTGGTTTAGGGACAGAAACCAGCCTTTGAGCACATGTATCTTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCTCTACGGAGATATCTAAACAAGGTGCTACTTGTGGCTGCTTCTGGTACATCTTCCACCAGATaGACATATTCCTGCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: TGPLRRYLNKVLLVAASGTSSTR*TYSCSI Trigger: GATACTGCAGGAATATGTCAATCTGGTGGAAGATGT...ACCAGAAGCAGCCACAAGTAGCACCTTGTTTAGATATCTCCGTAGAGGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGACAGGGGCACTGTTCTaGTGCAAAATTTCCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: STGESEFHVRLCLTQKQKTGALF*CKISTT Trigger: AGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS-3UTR CAA 90 bp | AGCACTGGTGAATCTGAATTCCATGTAAGACTGTGTCTGACACAGAAACAGAAGACGACATCATGGCACTaGAACTTAGTAGCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STGESEFHVRLCLTQKQKTTSWH*NLVAKF Trigger: GAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGT...CTTCTGTTTCTGTGTCAGACACAGTCTTACATGGAATTCAGATTCACCAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 72 bp | TCCTGGAGGGAGCGGAAGCGCTCTAGTGAACAGACCTaGCCCCGGCGGAGGCGTTGCACTGTATCACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRERKRSSEQT*PRRRRCTVSLR Trigger: CCTCAGTGATACAGTGCAACGCCTCCGCCGGGGCAAGGTCTGTTCACTAGAGCGCTTCCGCTCCCTCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072744.15 |
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| CDS CAA 90 bp | TGCAGCTTATCCTGGAGGGAGCGGAAGCGCTCTAGTGAACAGACCTaGCCCCGGCGGAGGCGTTGCACTGTATCACTGAGGCTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSLSWRERKRSSEQT*PRRRRCTVSLRLQS Trigger: TGACTGGAGCCTCAGTGATACAGTGCAACGCCTCCGCCGGGGCAAGGTCTGTTCACTAGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072744.15 |
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| CDS CAA 72 bp | GTGAACAGGGCATCAACGTCATTCCAGGCTCTCAGCTaGGCACGCGCAGCCAAGGCTGTCAGCACATACTGT | + |
|
Preference number: 6 (lower is better) Translates to: VNRASTSFQALS*ARAAKAVSTYC Trigger: ACAGTATGTGCTGACAGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGAATGACGTTGATGCCCTGTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS TCA 72 bp | AGACCTTGCCCCGGCGGAGGCGTTGCACTGTATCACTaGGGCTCCAGTCATTGCTGTAATCCCTGTATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPCPGGGVALYH*GSSHCCNPCIL Trigger: GAGAATACAGGGATTACAGCAATGACTGGAGCCTCAGTGATACAGTGCAACGCCTCCGCCGGGGCAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072744.15 |
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| CDS GCA 72 bp | TTCCCATCATGCATGCTTACTGCCTCCTCTAGGAGCTaGAGCTTATCCTGGAGGGAGCGGAAGCGCTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPSCMLTASSRS*SLSWRERKRSS Trigger: ACTAGAGCGCTTCCGCTCCCTCCAGGATAAGCTGCAGCTCCTAGAGGAGGCAGTAAGCATGCATGATGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 90 bp | TTCTTTGTGGTGAACAGGGCATCAACGTCATTCCAGGCTCTCAGCTaGGCACGCGCAGCCAAGGCTGTCAGCACATACTGTTTGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FFVVNRASTSFQALS*ARAAKAVSTYCLSG Trigger: CCCAGACAAACAGTATGTGCTGACAGCCTTGGCTGCGCGTGCCAAGCTGAGAGCCTGGAATGACGTTGATGCCCTGTTCACCACAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS TCA 72 bp | AGCAGGCGTAGAAGAGTGTCGTCACTAACGGCATGTTaGGAATGGAAGCTTTACGGGGGTGCTTCCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRRRVSSLTAC*EWKLYGGASGR Trigger: TCTTCCGGAAGCACCCCCGTAAAGCTTCCATTCTCAACATGCCGTTAGTGACGACACTCTTCTACGCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 72 bp | TTCCTCGGCGGATCCTTTGTCTACTTTGCTCCTGTATaGAAGCAACTGCTGACGATCCTTCAGGTCTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLGGSFVYFAPV*KQLLTILQVSA Trigger: TGCCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTAGACAAAGGATCCGCCGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS GCA 72 bp | ACTAACGGCATGTTGAGAATGGAAGCTTTACGGGGGTaGTTCCGGAAGATATCAGTCTGCCCTGAAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TNGMLRMEALRG*FRKISVCPEDS Trigger: GGAGTCTTCAGGGCAGACTGATATCTTCCGGAAGCACCCCCGTAAAGCTTCCATTCTCAACATGCCGTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 72 bp | AGGAAGATCAGAACTGCAGTGATGACGTTCCCATCATaGATGCTTACTGCCTCCTCTAGGAGCTGCAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RKIRTAVMTFPS*MLTASSRSCSL Trigger: TAAGCTGCAGCTCCTAGAGGAGGCAGTAAGCATGCATGATGGGAACGTCATCACTGCAGTTCTGATCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS TCA 72 bp | CCTTTGTCTACTTTGCTCCTGTATGCAAGCAACTGCTaGCGATCCTTCAGGTCTCGGCAAGTATCAATGACG | + |
|
Preference number: 6 (lower is better) Translates to: PLSTLLLYASNC*RSFRSRQVSMT Trigger: CGTCATTGATACTTGCCGAGACCTGAAGGATCGTCAGCAGTTGCTTGCATACAGGAGCAAAGTAGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 72 bp | GCTAAGTTCAACTTGGTGTCCACATCTTCCACCAGATaGACATATTCCTGCAGTATCTGGACAGGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AKFNLVSTSSTR*TYSCSIWTGAL Trigger: CAGTGCCCCTGTCCAGATACTGCAGGAATATGTCAATCTGGTGGAAGATGTGGACACCAAGTTGAACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 90 bp | CGATCCTTCAGGTCTCGGCAAGTATCAATGACGACATCATGGCACTaGAACTTAGTAGCTAAGTTCAACTTGGTGTCCACATCTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSFRSRQVSMTTSWH*NLVAKFNLVSTSST Trigger: GGTGGAAGATGTGGACACCAAGTTGAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGATACTTGCCGAGACCTGAAGGATCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS TCA 72 bp | CTAAGTTCAACTTGGTGTCCACATCTTCCACCAGATTaGCATATTCCTGCAGTATCTGGACAGGGGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSTWCPHLPPD*HIPAVSGQGHC Trigger: ACAGTGCCCCTGTCCAGATACTGCAGGAATATGTCAATCTGGTGGAAGATGTGGACACCAAGTTGAACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS GCA 72 bp | TATTCCTGCAGTATCTGGACAGGGGCACTGTTCTTGTaGAAAATTTCCACAACTCGATGGAAGCCAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: YSCSIWTGALFL*KISTTRWKPMG Trigger: ACCCATTGGCTTCCATCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGTCCAGATACTGCAGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 72 bp | TACTGTTTGTCTGGGATCTTGAATGTTTTCTTCAGGTaGATGGGACTGCTGAAGGTTCCCTCAGACTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: YCLSGILNVFFR*MGLLKVPSDSV Trigger: CACGGAGTCTGAGGGAACCTTCAGCAGTCCCATCAACCTGAAGAAAACATTCAAGATCCCAGACAAACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS GCA 72 bp | GTGCAAAATTTCCACAACTCGATGGAAGCCAATGGGTaGTCTCTTCTTGGTGTAACCCAACCAGTTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VQNFHNSMEANG*SLLGVTQPVLC Trigger: ACAAAGAACTGGTTGGGTTACACCAAGAAGAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAATTTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS CCA 72 bp | TCTTGTGCAAAATTTCCACAACTCGATGGAAGCCAATaGGTGCTCTCTTCTTGGTGTAACCCAACCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCAKFPQLDGSQ*VLSSWCNPTSS Trigger: AGAACTGGTTGGGTTACACCAAGAAGAGAGCACCCATTGGCTTCCATCGAGTTGTGGAAATTTTGCACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS CAA 72 bp | ACATATTCCTGCAGTATCTGGACAGGGGCACTGTTCTaGTGCAAAATTTCCACAACTCGATGGAAGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TYSCSIWTGALF*CKISTTRWKPM Trigger: CATTGGCTTCCATCGAGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGTCCAGATACTGCAGGAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS CCA 72 bp | TCCTTCAGGTCTCGGCAAGTATCAATGACGACATCATaGCACTTGAACTTAGTAGCTAAGTTCAACTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRSRQVSMTTS*HLNLVAKFNLV Trigger: CACCAAGTTGAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGATACTTGCCGAGACCTGAAGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS CAA 72 bp | AGGTCTCGGCAAGTATCAATGACGACATCATGGCACTaGAACTTAGTAGCTAAGTTCAACTTGGTGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSRQVSMTTSWH*NLVAKFNLVST Trigger: TGTGGACACCAAGTTGAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGATACTTGCCGAGACCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
||
| CDS TCA 72 bp | GGTGTAATGGTCTTGTACATGCGCAGCGTCTTCTGCTaGAAATGGCAAACCAATGCAAGTCTTAAGAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: GVMVLYMRSVFC*KWQTNASLKKF Trigger: GAATTTCTTAAGACTTGCATTGGTTTGCCATTTTCAGCAGAAGACGCTGCGCATGTACAAGACCATTACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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| CDS CAA 90 bp | TCAATGACGACATCATGGCACTTGAACTTAGTAGCTAAGTTCAACTaGGTGTCCACATCTTCCACCAGATTGACATATTCCTGCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: SMTTSWHLNLVAKFN*VSTSSTRLTYSCSI Trigger: GATACTGCAGGAATATGTCAATCTGGTGGAAGATGTGGACACCAAGTTGAACTTAGCTACTAAGTTCAAGTGCCATGATGTCGTCATTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021426.10 ENSMUST00000072744.15 ENSMUST00000179379.9 |
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