Pregenerated sensors for VIL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026175Ensembl transcript IDs: ENSMUST00000027366.13, ENSMUST00000159749.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGGAATaGGCAAATTACTATTATAAACAAAAGGAATTGTCACACTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: NSTRFPWVCGMRLKE*ANYYYKQKELSHCG Trigger: GCCACAGTGTGACAATTCCTTTTGTTTATAATAGTAATTTGCCCATTCCTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CCA 90 bp | TACTTAGCTGTCCATCTAAGAAAAGAAAACTCTACAAGATTTCCATaGGTCTGTGGCATGCGTCTGAAGGAATGGGCAAATTACTATTAT | + |
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Preference number: 1 (lower is better) Translates to: YLAVHLRKENSTRFP*VCGMRLKEWANYYY Trigger: ATAATAGTAATTTGCCCATTCCTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGATGGACAGCTAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGCAGGGTAGGGGCTGCTaGACAGCCAGAGAGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: AVSPALALALPFECEEGKQGRGC*TARELQ Trigger: TTGAAGCTCTCTGGCTGTCCAGCAGCCCCTACCCTG...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CAA 90 bp | TGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGTAAGCCCAGCTTaGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: CGALQRLWVRAVSPA*ALALPFECEEGKIR Trigger: CCTGATCTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTGCGGCACAAAGCCCTTaGAGGCAGGGTAGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CGSQVQLDIFICHRTKTSAAQSP*RQGRGC Trigger: GCAGCCCCTACCCTGCCTTCAAGGGCTTTGTGCCGC...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGTTGGACATTTTCATCTaGCACAGGACTAAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: AVSPALALALPFECEEGKLDIFI*HRTKTS Trigger: ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAA...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGCTCACAGGTACAATTaGACATTTTCATCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: SKKRKLYKISMGLWHASEAHRYN*TFSSAT Trigger: TGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGC...TTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CAA 90 bp | ATGCGTCTGAAGGAATGGGCAAATTACTATTATAAACAAAAGGAATaGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: MRLKEWANYYYKQKE*SHCGSQVQLDIFIC Trigger: GCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTTTGTTTATAATAGTAATTTGCCCATTCCTTCAGACGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR TCA 72 bp | ACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTaGAGGCAGGGTAGGGGCTGCTGGACAGCCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: TGLKPVMAAQSP*RQGRGCWTARE Trigger: CTCTCTGGCTGTCCAGCAGCCCCTACCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR TCA 72 bp | TTTGAGTGTGAGGAGGGTAAGATCAGGATAAGATCCTaGGTGAGTGACGGTGCCAGAGAAACCCCCAGACGC | + |
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Preference number: 3 (lower is better) Translates to: FECEEGKIRIRS*VSDGARETPRR Trigger: GCGTCTGGGGGTTTCTCTGGCACCGTCACTCACTCAGGATCTTATCCTGATCTTACCCTCCTCACACTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR GCA 72 bp | CACTGTGGCTCACAGGTACAATTGGACATTTTCATCTaGCACAGGACTAAAACCAGTAATGGCGGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: HCGSQVQLDIFI*HRTKTSNGGTK Trigger: CTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CCA 72 bp | CTTCTGATTGGACTTCACGTAGCAAACCCATGTTCCTaGTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLIGLHVANPCS*CCHLRSLWSFA Trigger: TGCAAAGCTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR-3UTR CAA 90 bp | TCTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGGCTCACAGGTACAATaGGACATTTTCATCTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SKKRKLYKISMGLWHASEGSQVQ*DIFICH Trigger: GTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCC...TTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CCA 72 bp | CCAGTTTTAAGAGAAAATCACCTATTGGCTTCTGATTaGACTTCACGTAGCAAACCCATGTTCCTGGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: PVLRENHLLASD*TSRSKPMFLVL Trigger: CAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATCAGAAGCCAATAGGTGATTTTCTCTTAAAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR TCA 72 bp | ACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTaGAGGAATGGGCAAATTACTATTATAAACAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: TLQDFHGSVACV*RNGQITIINKR Trigger: CCTTTTGTTTATAATAGTAATTTGCCCATTCCTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CCA 72 bp | AAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTaGCATGCGTCTGAAGGAATGGGCAAATTACTATTA | + |
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Preference number: 3 (lower is better) Translates to: KKRKLYKISMGL*HASEGMGKLLL Trigger: TAATAGTAATTTGCCCATTCCTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGCCACAGTGTGGGTTTTaGCGAGGCCTGAGGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKPQCGF*RGLRSG Trigger: ACCGGACCTCAGGCCTCGGCAAAACCCACACTGTGG...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGGCTCCTCCTTCCTGCTaGGGTCCACACCCTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGAPPSC*GPHPQG Trigger: TCCCTGAGGGTGTGGACCCCAGCAGGAAGGAGGAGC...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGGGCAGAGAAGGCAGCTaGAGTCATGCCCAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKGREGS*SHAQGP Trigger: AGGGCCTTGGGCATGACTCCAGCTGCCTTCTCTGCC...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | CAAAGGCTCTGGGTTAGAGCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGGGGGCTCGTGTCCCTaGTTCACCACGATGATAGGG | + |
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Preference number: 4 (lower is better) Translates to: QRLWVRAVSPALALALPFGGSCP*FTTMIG Trigger: CCCTATCATCGTGGTGAAGCAGGGACACGAGCCCCC...AAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGCTCTAACCCAGAGCCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGGGTCTCGGATCTCTTTaGCCAAGGCCATGCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKGLGSL*PRPCPE Trigger: TTCGGGGCATGGCCTTGGCCAAAGAGATCCGAGACC...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGCGTCCACCCCGTTCCTaGTCTCGGATCTCTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGRPPRS*SRISLA Trigger: GGCCAAAGAGATCCGAGACCAGGAACGGGGTGGACG...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGAATGGCCCAGCCACTTaGACTCCACAGGCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKNGPAT*TPQAPA Trigger: AGCTGGTGCCTGTGGAGTCCAAGTGGCTGGGCCATT...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGGCAGCCTCTTGGTGTTaGCGTAGGGCGCCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VLSFEESVELCKGSGLELAASWC*RRAPSR Trigger: GCGGGAAGGCGCCCTACGCCAACACCAAGAGGCTGC...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGCATTCCTCTTGCCCTTaGCGTGCAACAGTCGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKHSSCP*RATVAG Trigger: TCCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATG...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGTGCTGGGCAGCCACCTaGGGTTGTACATGCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGCWAAT*GCTCMV Trigger: GACCATGCATGTACAACCTCAGGTGGCTGCCCAGCA...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGAAGATAGACATGAGGTaGGGCGGCTCCTTGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKKIDMR*GGSLPI Trigger: GATGGGCAAGGAGCCGCCTCACCTCATGTCTATCTT...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGTCGCTCTCGTTGCCTTaGACCTCGCGGTGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: VLSFEESVELCKGSGLELSLSLP*TSRCWT Trigger: TGTCCAGCACCGCGAGGTTCAAGGCAACGAGAGCGA...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGAAGTCTCGCTCTCGTTaGCTTGAACCTCGCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGKSRSR*LEPRGA Trigger: AGCACCGCGAGGTTCAAGGCAACGAGAGCGAGACTT...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGGGTGTAGATGGCAGCTaGCCCCTGCTCATCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TSRSKPMFLVLSFEESVEGVDGS*PLLILG Trigger: TCCCAGGATGAGCAGGGGGCAGCTGCCATCTACACC...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | CGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCTTCTGCACCTCAACCTaGGTGCTCGGTGGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: RSKPMFLVLSFEESVELCFCTST*VLGGYC Trigger: GCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAA...GCAAAGCTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGGTGCTCCTCCTTCCTaGTGGGGTCCACACCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFICHRTKTSNGGTKPLKGAPPS*WGPHPQ Trigger: CTGAGGGTGTGGACCCCAGCAGGAAGGAGGAGCACC...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGAATTGCCATCAGCTGTaGGGAGTCCCCTTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGNCHQL*GVPFLL Trigger: GAGAAGGAAGGGGACTCCCCACAGCTGATGGCAATT...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGGACCCGGATCTGTACTaGCTCGTCATTGTACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AVSPALALALPFECEEGKDPDLY*LVIVLL Trigger: CAGAAGTACAATGACGAGCCAGTACAGATCCGGGTC...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGGGCCGGCTCCACCACTaGGTCAGAAATAGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSRSKPMFLVLSFEESVEGRLHH*VRNSSL Trigger: AAGGCTGCTATTTCTGACTCAGTGGTGGAGCCGGCC...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGCTCCTTGCCCATCGTaGCCCGGATCTGTACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DWTSRSKPMFLVLSFEESAPCPS*PGSVLA Trigger: AGCCAGTACAGATCCGGGTCACGATGGGCAAGGAGC...AGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTATGGCAGCTGCCCCCTaGTCATCCTGGGACGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSMAAAP*SSWDES Trigger: GGACTCGTCCCAGGATGAGCAGGGGGCAGCTGCCAT...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGGCCTGAGGTCCGGTTaGGCACTGTCCACTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IFICHRTKTSNGGTKPLKGLRSG*ALSTSG Trigger: TCCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCC...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCAGCTCCAGGGGGAAGGTaGGCAGGGGCCCAGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPAPGGR*AGAQNS Trigger: TGAGTTCTGGGCCCCTGCCCACCTTCCCCCTGGAGC...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | TCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGTTTTGCCGAGGCCTaGGGTCCGGTTGGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SQVQLDIFICHRTKTSNGGFAEA*GPVGHC Trigger: ACAGTGCCCAACCGGACCTCAGGCCTCGGCAAAACC...GCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTTTGGTCCCTCGGACCTaGAATAGCCTCGTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: DWTSRSKPMFLVLSFEESLVPRT*NSLVEG Trigger: GCCCTCTACGAGGCTATTTCAGGTCCGAGGGACCAA...AGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACACCCTCTCATCCCCACTaGAGCCCTTCCCACACCACA | + |
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Preference number: 4 (lower is better) Translates to: VQLDIFICHRTKTSNGGTPSHPH*SPSHTT Trigger: TGTGGTGTGGGAAGGGCTGCAGTGGGGATGAGAGGG...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGTTCTGGAAGAGTTGTTaGAAGATGGGGGACTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSFEESVELCKGSGLELFWKSC*KMGDSA Trigger: GGCCGAGTCCCCCATCTTCCAACAACTCTTCCAGAA...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTGCTGCAATTTCATCCTaGCTGGCCTGGCTGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSAAISS*LAWLPC Trigger: GCAGGGCAGCCAGGCCAGCCAGGATGAAATTGCAGC...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGCACGTGGTTCATAATTaGCATCAGCTGTGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VLSFEESVELCKGSGLELHVVHN*HQLWGV Trigger: GACTCCCCACAGCTGATGGCAATTATGAACCACGTG...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCAGCACCTCAACCTGCGTaGTCGGTGGGTACTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPAPQPA*SVGTAW Trigger: CCAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGC...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTACAGAGCCCACAGTGTaGGTTTTGCCGAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSTEPTV*VLPRPE Trigger: CTCAGGCCTCGGCAAAACCCACACTGTGGGCTCTGT...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTGAGCCATCCAGAAGTTaGCTGGCTCCTGCCCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSEPSRS*LAPAPL Trigger: TAGAGGGGCAGGAGCCAGCCAACTTCTGGATGGCTC...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACATCTGTGTGGTGTAGATaGCAGCTGCCCCCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQLDIFICHRTKTSNGGTSVWCR*QLPPAH Trigger: ATGAGCAGGGGGCAGCTGCCATCTACACCACACAGA...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| 3UTR CAA 72 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTaGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DWTSRSKPMFLV*SFEESVELCKG Trigger: GCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR TCA 90 bp | CGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAGACATCCCCTCTGTTaGAACTCTTCCAGGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RSKPMFLVLSFEESVELCRHPLC*NSSRTF Trigger: AAATGTCCTGGAAGAGTTTCAACAGAGGGGATGTCT...GCAAAGCTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACCCGAAGTCTCTCCATaGGGTTACTCTCTGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPPEVSP*GYSLAH Trigger: ATGGGCCAGAGAGTAACCGCATGGAGAGACTTCGGG...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR GCA 90 bp | CTAATGTCTCCTGGAGTACTTAGCTGTCCATCTAAGAAAAGAAAACTCTACAAGTCGATGCGCCACACCTaGACTTCCCCACTCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPGVLSCPSKKRKLYKSMRHT*TSPLPS Trigger: TGACGGGAGTGGGGAAGTGCAGGTGTGGCGCATCGA...CTTGTAGAGTTTTCTTTTCTTAGATGGACAGCTAAGTACTCCAGGAGACATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR GCA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACATTGATACGCCGAGGCTaGAATTTCATCCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQLDIFICHRTKTSNGGTLIRRG*NFILAG Trigger: GCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAA...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR GCA 90 bp | CTAATGTCTCCTGGAGTACTTAGCTGTCCATCTAAGAAAAGAAAACTCTACAAGTCTTCGGTGGACAGGTaGTCCTCCTTCCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPGVLSCPSKKRKLYKSSVDR*SSFLLG Trigger: CCCCAGCAGGAAGGAGGAGCACCTGTCCACCGAAGA...CTTGTAGAGTTTTCTTTTCTTAGATGGACAGCTAAGTACTCCAGGAGACATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGCATGCGGTTACTCTCTaGCCCATTCCACTGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSRSKPMFLVLSFEESVEHAVTL*PIPLDN Trigger: ATTATCCAGTGGAATGGGCCAGAGAGTAACCGCATG...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTCTTCAGTTCTTTGCGTaGGCCCAGCACGTGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSLQFFA*AQHVVH Trigger: ATGAACCACGTGCTGGGCCCACGCAAAGAACTGAAG...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGGGCACTGTCCACTTCTaGAAGAGTTGTTGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSRSKPMFLVLSFEESVEGTVHF*KSCWKM Trigger: CATCTTCCAACAACTCTTCCAGAAGTGGACAGTGCC...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCCATCCAGAAGTTGGCTaGCTCCTGCCCCTCTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQVQLDIFICHRTKTSNGHPEVG*LLPLYY Trigger: GTAGTAGAGGGGCAGGAGCCAGCCAACTTCTGGATG...GCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTCGAGGAGTGATGACTTaGTTTTCCTCCTGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSRGVMT*FSSCSL Trigger: GAGGCTGCAGGAGGAAAACCAAGTCATCACTCCTCG...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR TCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTTCACAAGGCCTTGCTTaGAGTAGCTCCGGAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSSQGLA*SSSGKS Trigger: AGACTTTCCGGAGCTACTTCAAGCAAGGCCTTGTGA...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR TCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCATGGTGTTACTCCACTTaGAGGGATCCCAAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPWCYST*RDPKPG Trigger: TCCTGGCTTGGGATCCCTTCAAGTGGAGTAACACCA...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCATTTCTACGTGCTTCATaGCGGAAGCCACTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPFLRAS*RKPLPL Trigger: AAGGGGGAGTGGCTTCCGGCATGAAGCACGTAGAAA...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCAAAGTTGGCTGGCTCCTaGCCCTCTACTACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPKLAGS*PSTTTC Trigger: ACAAGTGGTAGTAGAGGGGCAGGAGCCAGCCAACTT...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGAGCTTCCAAAGGTGCTaGAAGGAACAGGTACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IFICHRTKTSNGGTKPLKSFQRC*KEQVPS Trigger: AGATGGTACCTGTTCCTTCCAGCACCTTTGGAAGCT...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGAACCTGCGTGCTCGGTaGGTACTGCTTGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKENSTRFPWVCGMRLKNLRAR*VLLGFD Trigger: ATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTT...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACATATCAGCAACCATCTTaGCCATCTCCCTCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQLDIFICHRTKTSNGGTYQQPS*PSPSHP Trigger: GGGATGAGAGGGAGATGGCCAAGATGGTTGCTGATA...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTTCTCCGTCCGAGAGATaGTATCAGCAACCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVQLDIFICHRTKTSSPSER*YQQPSW Trigger: CCAAGATGGTTGCTGATACCATCTCTCGGACGGAGA...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | TCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGTTGCTTTTCCCCTATaGGGTAGGTGTAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVQLDIFICHRTKTSNGVAFPL*GRCRAA Trigger: TGCTGCTCTACACCTACCTCATAGGGGAAAAGCAAC...GCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACCAGGTCATCCTGATTaGAGTCAAAGATCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPPGHPD*SQRSLW Trigger: CCACAGAGATCTTTGACTTCAATCAGGATGACCTGG...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | TCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCAGAAGCTTCCAAAGGTaGTGGAAGGAACAGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVQLDIFICHRTKTSNGRSFQR*WKEQVP Trigger: TGGTACCTGTTCCTTCCAGCACCTTTGGAAGCTTCT...GCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCATCTGGCCCATTCCACTaGATAATAAGCTTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPSGPFH*IISFPR Trigger: CCTTGGGAAGCTTATTATCCAGTGGAATGGGCCAGA...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGAGGTTGTACATGCATaGTCAGAGCATCAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFICHRTKTSNGGTKPLKEVVHA*SEHQTS Trigger: TGAAGTTTGATGCTCTGACCATGCATGTACAACCTC...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGTCTTCTCTTCCTCATTaGCATGTTTCCCTATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFICHRTKTSNGGTKPLKSSLPH*HVSLSR Trigger: TCTGGATAGGGAAACATGCCAATGAGGAAGAGAAGA...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR TCA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGTCCTCCAGGTCATCCTaGTTGAAGTCAAAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKENSTRFPWVCGMRLKSSRSS*LKSKIS Trigger: AGAGATCTTTGACTTCAATCAGGATGACCTGGAGGA...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CCA 90 bp | TCTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAATCCAGAAGAAGACCTaGTCCCAGACATCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKKRKLYKISMGLWHASEIQKKT*SQTSNR Trigger: CCTATTGGATGTCTGGGACCAGGTCTTCTTCTGGAT...TTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | TCTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAATTGTACAGTTGTAGCTaGAGCCTTCTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKKRKLYKISMGLWHASELYSCS*SLLLFL Trigger: GAGGAAGAGAAGAAGGCTGCAGCTACAACTGTACAA...TTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR GCA 90 bp | TCTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAATTCTTGATGTTTTGTTaGTTCCATCGAGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKKRKLYKISMGLWHASEFLMFC*FHRGRA Trigger: TGCCCTGCCTCGATGGAAGCAACAAAACATCAAGAA...TTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 90 bp | AGGTCCGGTTGGGCACTGTCCACTTCTGGAAGAGTTGTTGGAAGATaGGGGACTCGGCCCCGTCATTCTGCACCTCAACCTGCGTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSGWALSTSGRVVGR*GTRPRHSAPQPACS Trigger: CGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCCGAGTCCCCCATCTTCCAACAACTCTTCCAGAAGTGGACAGTGCCCAACCGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 90 bp | CACCTACGTAGGTACGTCCACCCCGTTCCTGGTCTCGGATCTCTTTaGCCAAGGCCATGCCCCGAAGTCTCTCCATGCGGTTACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRRYVHPVPGLGSL*PRPCPEVSPCGYSL Trigger: CAGAGAGTAACCGCATGGAGAGACTTCGGGGCATGGCCTTGGCCAAAGAGATCCGAGACCAGGAACGGGGTGGACGTACCTACGTAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS TCA 90 bp | CACATGGTACAGCTTGAGTGCAGCCTTAGCGGCCGGCTCCACCACTaGGTCAGAAATAGCAGCCTTCAGTTCTTTGCGTGGGCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HMVQLECSLSGRLHH*VRNSSLQFFAWAQH Trigger: GTGCTGGGCCCACGCAAAGAACTGAAGGCTGCTATTTCTGACTCAGTGGTGGAGCCGGCCGCTAAGGCTGCACTCAAGCTGTACCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS TCA 90 bp | ACGTGCTTCATGCCGGAAGCCACTCCCCCTTTCCGGATCGTTAAATaGAACTGCGGTGGTGGAGCTGGGGTTTCCATGAGGAGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCFMPEATPPFRIVK*NCGGGAGVSMRRAS Trigger: GCTGGCTCTCCTCATGGAAACCCCAGCTCCACCACCGCAGTTTCATTTAACGATCCGGAAAGGGGGAGTGGCTTCCGGCATGAAGCACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159749.2 |
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| CDS GCA 90 bp | TGTTGGAAGATGGGGGACTCGGCCCCGTCATTCTGCACCTCAACCTaGGTGCTCGGTGGGTACTGCTTGGCTTTGATGAAGTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CWKMGDSAPSFCTST*VLGGYCLALMKFKA Trigger: GGCCTTGAACTTCATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCCGAGTCCCCCATCTTCCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CCA 90 bp | CATGAGGTGAGGCGGCTCCTTGCCCATCGTGACCCGGATCTGTACTaGCTCGTCATTGTACTTCTGGTCCAACAGGACGGCTTGATACGC | + |
|
Preference number: 5 (lower is better) Translates to: HEVRRLLAHRDPDLY*LVIVLLVQQDGLIR Trigger: GCGTATCAAGCCGTCCTGTTGGACCAGAAGTACAATGACGAGCCAGTACAGATCCGGGTCACGATGGGCAAGGAGCCGCCTCACCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CAA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGGCAGCCTTCAGTTCTTaGCGTGGGCCCAGCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGAAFSS*RGPSTW Trigger: CCACGTGCTGGGCCCACGCAAAGAACTGAAGGCTGC...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS-3UTR CAA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGAGAGCCATCCAGAAGTaGGCTGGCTCCTGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVSPALALALPFECEEGKRAIQK*AGSCPS Trigger: AGAGGGGCAGGAGCCAGCCAACTTCTGGATGGCTCT...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS TCA 90 bp | ATCTGTACTGGCTCGTCATTGTACTTCTGGTCCAACAGGACGGCTTaGTACGCCGAGGCTGCAATTTCATCCTGGCTGGCCTGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICTGSSLYFWSNRTA*YAEAAISSWLAWLP Trigger: GGGCAGCCAGGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGACCAGAAGTACAATGACGAGCCAGTACAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 90 bp | TTCTGGAAGAGTTGTTGGAAGATGGGGGACTCGGCCCCGTCATTCTaGACCTCAACCTGCGTGCTCGGTGGGTACTGCTTGGCTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FWKSCWKMGDSAPSF*TSTCVLGGYCLALM Trigger: CATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCCGAGTCCCCCATCTTCCAACAACTCTTCCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 90 bp | CTGGCTCCTGCCCCTCTACTACCACTTGTTTCTCCGTCCGAGAGATaGTATCAGCAACCATCTTGGCCATCTCCCTCTCATCCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPAPLLPLVSPSER*YQQPSWPSPSHPHC Trigger: GCAGTGGGGATGAGAGGGAGATGGCCAAGATGGTTGCTGATACCATCTCTCGGACGGAGAAACAAGTGGTAGTAGAGGGGCAGGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGTGGTCTCGGATCTCTTaGGCCAAGGCCATGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGWSRIS*AKAMPR Trigger: TCGGGGCATGGCCTTGGCCAAAGAGATCCGAGACCA...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGGTCCAACAGGACGGCTaGATACGCCGAGGCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSPALALALPFECEEGKVQQDG*IRRGCN Trigger: ATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGAC...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 90 bp | CTTGATGTTTTGTTGCTTCCATCGAGGCAGGGCAGAGAAGGCAGCTaGAGTCATGCCCAAGGCCCTAGTGAAGTCTTCGGTGGACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LDVLLLPSRQGREGS*SHAQGPSEVFGGQV Trigger: CACCTGTCCACCGAAGACTTCACTAGGGCCTTGGGCATGACTCCAGCTGCCTTCTCTGCCCTGCCTCGATGGAAGCAACAAAACATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GCTGTAAGCCCAGCTTTGGCCTTAGCCCTCCCTTTTGAGTGTGAGGAGGGTAAGATGCTTGAGCAGGTCTaGTGTGAGTGGCCGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSPALALALPFECEEGKMLEQV*CEWPSS Trigger: GCTACTCGGCCACTCACACAAGACCTGCTCAAGCAT...CTTACCCTCCTCACACTCAAAAGGGAGGGCTAAGGCCAAAGCTGGGCTTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 90 bp | TTGACGTGCAACAGTCGCTGGACATCACAGGAGTTTGTTTCTACGTaGTTCATGCCGGAAGCCACTCCCCCTTTCCGGATCACAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTCNSRWTSQEFVST*FMPEATPPFRITRP Trigger: AGGCCTTGTGATCCGGAAAGGGGGAGTGGCTTCCGGCATGAAGCACGTAGAAACAAACTCCTGTGATGTCCAGCGACTGTTGCACGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 90 bp | GAGTCAGAAATAGCAGCCTTCAGTTCTTTGCGTGGGCCCAGCACGTaGTTCATAATTGCCATCAGCTGTGGGGAGTCCCCTTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESEIAAFSSLRGPST*FIIAISCGESPSFS Trigger: GGAGAAGGAAGGGGACTCCCCACAGCTGATGGCAATTATGAACCACGTGCTGGGCCCACGCAAAGAACTGAAGGCTGCTATTTCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGCTTCTGGAAGAGTTGTaGGAAGATGGGGGACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGLLEEL*EDGGLG Trigger: GCCGAGTCCCCCATCTTCCAACAACTCTTCCAGAAG...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGAGGCCTGAGGTCCGGTaGGGCACTGTCCACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSKPMFLVLSFEESVERPEVR*GTVHFW Trigger: CCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCCT...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAATGGCCCAGCCACTaGGACTCCACAGGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSKPMFLVLSFEESVELCKWPSH*DSTGTS Trigger: GCTGGTGCCTGTGGAGTCCAAGTGGCTGGGCCATTT...GCAAAGCTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 90 bp | GCAGTGAAAACGTCCACTTTCGGGCTCATAACCTCGTCAGCAATCTaGCTCCAGTCCCCAGAGTTTCCCAGCTCTGCCTTAAGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AVKTSTFGLITSSAI*LQSPEFPSSALRSS Trigger: TGATGACCTTAAGGCAGAGCTGGGAAACTCTGGGGACTGGAGCCAGATTGCTGACGAGGTTATGAGCCCGAAAGTGGACGTTTTCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS TCA 90 bp | GTCACCTCAAAAGCCTTGGTGTTATCAGCATTGGTCCCTCGGACCTaGAATAGCCTCGTAGAGGGCACAGGCTCCAAGTTGTTCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTSKALVLSALVPRT*NSLVEGTGSKLFFR Trigger: CCGAAAGAACAACTTGGAGCCTGTGCCCTCTACGAGGCTATTTCAGGTCCGAGGGACCAATGCTGATAACACCAAGGCTTTTGAGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS TCA 90 bp | TCCCAGACATCCAATAGGAACACATCCTCCTCCTCCAGGTCATCCTaGTTGAAGTCAAAGATCTCTGTGGCCAGAAAGCGTCCGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQTSNRNTSSSSRSS*LKSKISVARKRPVW Trigger: CCAGACCGGACGCTTTCTGGCCACAGAGATCTTTGACTTCAATCAGGATGACCTGGAGGAGGAGGATGTGTTCCTATTGGATGTCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 90 bp | GCAACAGTCGCTGGACATCACAGGAGTTTGTTTCTACGTGCTTCATaGCGGAAGCCACTCCCCCTTTCCGGATCGTTAAATGAAACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATVAGHHRSLFLRAS*RKPLPLSGSLNETA Trigger: CGCAGTTTCATTTAACGATCCGGAAAGGGGGAGTGGCTTCCGGCATGAAGCACGTAGAAACAAACTCCTGTGATGTCCAGCGACTGTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159749.2 |
||
| CDS CCA 90 bp | CCAACAGGACGGCTTGATACGCCGAGGCTGCAATTTCATCCTGGCTaGCCTGGCTGCCCTGCCAGATATATAACAAGTAGTGTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PTGRLDTPRLQFHPG*PGCPARYITSSVAF Trigger: AAAAGCAACACTACTTGTTATATATCTGGCAGGGCAGCCAGGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACACTCGCTCTCGTTGCCTaGAACCTCGCGGTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VQLDIFICHRTKTSNGGTLALVA*NLAVLD Trigger: GTCCAGCACCGCGAGGTTCAAGGCAACGAGAGCGAG...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGCCCACAGTGTGGGTTTaGCCGAGGCCTGAGGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRKENSTRFPWVCGMRLKPTVWV*PRPEVR Trigger: CCGGACCTCAGGCCTCGGCAAAACCCACACTGTGGG...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGCCGAGGAGTGATGACTaGGTTTTCCTCCTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSFEESVELCKGSGLELPRSDD*VFLLQP Trigger: AGGCTGCAGGAGGAAAACCAAGTCATCACTCCTCGG...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS TCA 90 bp | AGACATCCAATAGGAACACATCCTCCTCCTCCAGGTCATCCTGATTaGAGTCAAAGATCTCTGTGGCCAGAAAGCGTCCGGTCTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHPIGTHPPPPGHPD*SQRSLWPESVRSGW Trigger: CCAACCAGACCGGACGCTTTCTGGCCACAGAGATCTTTGACTTCAATCAGGATGACCTGGAGGAGGAGGATGTGTTCCTATTGGATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 90 bp | TGCTTCACCACGATGATAGGGGTCTCAAGGTCTCGGTTTCCAGGGTaGGTCTTGAGGTATTCTTGTACAGTTGTAGCTGCAGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFTTMIGVSRSRFPG*VLRYSCTVVAAAFF Trigger: GAAGAAGGCTGCAGCTACAACTGTACAAGAATACCTCAAGACCCACCCTGGAAACCGAGACCTTGAGACCCCTATCATCGTGGTGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGGAGAGAGCCTTTGACTaGGGCATTCAGTTTAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGERAFD*GIQFSH Trigger: ATGACTAAACTGAATGCCCAAGTCAAAGGCTCTCTC...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTCCGGATCACAAGGCCTaGCTTGAAGTAGCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DWTSRSKPMFLVLSFEESPDHKA*LEVAPE Trigger: TTCCGGAGCTACTTCAAGCAAGGCCTTGTGATCCGG...AGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAGGCACAGGCTCCAAGTaGTTCTTTCGGGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLDIFICHRTKTSNGGTGTGSK*FFREVP Trigger: AGGCACCTCCCGAAAGAACAACTTGGAGCCTGTGCC...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTGGAGTTGGTGTTACTCCACTaGAAGGGATCCCAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSKPMFLVLSFEESVELVLLH*KGSQAR Trigger: CCTGGCTTGGGATCCCTTCAAGTGGAGTAACACCAA...CTCCACAGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTCCGGGAGTGGTGATGTaGAGAGAGCCTTTGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CGSQVQLDIFICHRTKTSPGVVM*REPLTW Trigger: CCAAGTCAAAGGCTCTCTCAACATCACCACTCCCGG...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTGTCATTTGAGGAGTCTGTGGAGCTTTGCAAAGGCTCTGGGTTAGAGCTGGGACATCACAGGAGTTaGTTTCTACGTGCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSFEESVELCKGSGLELGHHRS*FLRASC Trigger: GCATGAAGCACGTAGAAACAAACTCCTGTGATGTCC...CAGCTCTAACCCAGAGCCTTTGCAAAGCTCCACAGACTCCTCAAATGACAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAACATTCCTCTTGCCCTaGACGTGCAACAGTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VQLDIFICHRTKTSNGGTTFLLP*TCNSRW Trigger: CCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATGT...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGCCACTTCTGGAAGAGTaGTTGGAAGATGGGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: IFICHRTKTSNGGTKPLKPLLEE*LEDGGL Trigger: GAGTCCCCCATCTTCCAACAACTCTTCCAGAAGTGG...CTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGGGCAGCCACCTGAGGTaGTACATGCATGGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRKENSTRFPWVCGMRLKGSHLR*YMHGQS Trigger: GCTCTGACCATGCATGTACAACCTCAGGTGGCTGCC...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAAAGCCCTTGAAGGCAGGGTTCTTTCTTGATGTTTaGTTGCTTCCATCGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICHRTKTSNGGTKPLKAGFFLDV*LLPSRQ Trigger: CTGCCTCGATGGAAGCAACAAAACATCAAGAAAGAA...CCCTGCCTTCAAGGGCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 90 bp | TCGGTTTCCAGGGTGGGTCTTGAGGTATTCTTGTACAGTTGTAGCTaGAGCCTTCTTCTCTTCCTCATTGGCATGTTTCCCTATCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVSRVGLEVFLYSCS*SLLLFLIGMFPYPE Trigger: TTCTGGATAGGGAAACATGCCAATGAGGAAGAGAAGAAGGCTGCAGCTACAACTGTACAAGAATACCTCAAGACCCACCCTGGAAACCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCGGCACAGTATCAGCAACCATCTaGGCCATCTCCCTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VQLDIFICHRTKTSNGGTVSATI*AISLSS Trigger: GGATGAGAGGGAGATGGCCAAGATGGTTGCTGATAC...TGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCAGGGTACTGCTTGGCTTaGATGAAGTTCAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPGYCLA*MKFKAW Trigger: CCAGGCCTTGAACTTCATCAAAGCCAAGCAGTACCC...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | TGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTCTCGGTGGGTACTGCTaGGCTTTGATGAAGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CGSQVQLDIFICHRTKTSLGGYC*ALMKFK Trigger: CTTGAACTTCATCAAAGCCAAGCAGTACCCACCGAG...ACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGTCACCTCAAAAGCCTaGGTGTTATCAGCATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DWTSRSKPMFLVLSFEESVTSKA*VLSALV Trigger: GACCAATGCTGATAACACCAAGGCTTTTGAGGTGAC...AGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCACCCCTCTACTACCACTaGTTTCTCCGTCCGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPPLYYH*FLRPRD Trigger: ATCTCTCGGACGGAGAAACAAGTGGTAGTAGAGGGG...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACTTCACGTAGCAAACCCATGTTCCTGGTGTTGTCATTTGAGGAGTCTGAACTCAGACTGGTATaGGCAGTGAAAACGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DWTSRSKPMFLVLSFEESELRLV*AVKTST Trigger: AGTGGACGTTTTCACTGCCAATACCAGTCTGAGTTC...AGACTCCTCAAATGACAACACCAGGAACATGGGTTTGCTACGTGAAGTCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGAGATCCTCTACAGACTaGTTTACCAGCTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRKENSTRFPWVCGMRLKRSSTD*FTSCSR Trigger: CCTGGAGCAGCTGGTAAACAAGTCTGTAGAGGATCT...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CTAATGTCTCCTGGAGTACTTAGCTGTCCATCTAAGAAAAGAAAACTCTACAAGAGAGTGCTGCTGGTCTaGTGGATAGCCAGGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: LMSPGVLSCPSKKRKLYKRVLLV*WIARTT Trigger: TGTAGTCCTGGCTATCCACAAGACCAGCAGCACTCT...CTTGTAGAGTTTTCTTTTCTTAGATGGACAGCTAAGTACTCCAGGAGACATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | CTAAGAAAAGAAAACTCTACAAGATTTCCATGGGTCTGTGGCATGCGTCTGAAGAAGACATCCCCTCTGTaGAAACTCTTCCAGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: LRKENSTRFPWVCGMRLKKTSPL*KLFQDI Trigger: AATGTCCTGGAAGAGTTTCAACAGAGGGGATGTCTT...CTTCAGACGCATGCCACAGACCCATGGAAATCTTGTAGAGTTTTCTTTTCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | TCACAGGTACAATTGGACATTTTCATCTGCCACAGGACTAAAACCAGTAATGGCTTCTTCTCTTCCTCATaGGCATGTTTCCCTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQVQLDIFICHRTKTSNGFFSSS*ACFPIQ Trigger: CTGGATAGGGAAACATGCCAATGAGGAAGAGAAGAA...GCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCCAATTGTACCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTGTCACACTGTGGCTCACAGGTACAATTGGACATTTTCATCTGCCAATGTTGAGAGAGCCTTaGACTTGGGCATTCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KGIVTLWLTGTIGHFHLPMLREP*TWAFSL Trigger: TAAACTGAATGCCCAAGTCAAAGGCTCTCTCAACAT...TGGCAGATGAAAATGTCCAATTGTACCTGTGAGCCACAGTGTGACAATTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 72 bp | CCCGTTCCTGGTCTCGGATCTCTTTGGCCAAGGCCATaGCCCGAAGTCTCTCCATGCGGTTACTCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVPGLGSLWPRP*PEVSPCGYSLA Trigger: GGCCAGAGAGTAACCGCATGGAGAGACTTCGGGGCATGGCCTTGGCCAAAGAGATCCGAGACCAGGAACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
||
| CDS GCA 72 bp | ACTTGGACTCCACAGGCACCAGCTCCAAGTCCTCGATaGGCCACACCTGCACTTCCCCACTCCCGTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWTPQAPAPSPR*ATPALPHSRHP Trigger: TGGATGACGGGAGTGGGGAAGTGCAGGTGTGGCGCATCGAGGACTTGGAGCTGGTGCCTGTGGAGTCCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 72 bp | CTTCTGGTCCAACAGGACGGCTTGATACGCCGAGGCTaGAATTTCATCCTGGCTGGCCTGGCTGCCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLVQQDGLIRRG*NFILAGLAALP Trigger: TGGCAGGGCAGCCAGGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGACCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 72 bp | AGGTACGTCCACCCCGTTCCTGGTCTCGGATCTCTTTaGCCAAGGCCATGCCCCGAAGTCTCTCCATGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RYVHPVPGLGSL*PRPCPEVSPCG Trigger: ACCGCATGGAGAGACTTCGGGGCATGGCCTTGGCCAAAGAGATCCGAGACCAGGAACGGGGTGGACGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
||
| CDS CAA 90 bp | GCGTCCGGTCTGGTTGGAGCACTCGAAGAGCCGAGGAGTGATGACTaGGTTTTCCTCCTGCAGCCTCTTGGTGTTGGCGTAGGGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASGLVGALEEPRSDD*VFLLQPLGVGVGRL Trigger: AAGGCGCCCTACGCCAACACCAAGAGGCTGCAGGAGGAAAACCAAGTCATCACTCCTCGGCTCTTCGAGTGCTCCAACCAGACCGGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS GCA 72 bp | ATGGGGGACTCGGCCCCGTCATTCTGCACCTCAACCTaGGTGCTCGGTGGGTACTGCTTGGCTTTGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGDSAPSFCTST*VLGGYCLALMK Trigger: CTTCATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCCGAGTCCCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
||
| CDS GCA 72 bp | AGTTGTTGGAAGATGGGGGACTCGGCCCCGTCATTCTaGACCTCAACCTGCGTGCTCGGTGGGTACTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCWKMGDSAPSF*TSTCVLGGYCL Trigger: CAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCCGAGTCCCCCATCTTCCAACAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
||
| CDS GCA 72 bp | TTCCCGCCCAGAGCCATCCAGAAGTTGGCTGGCTCCTaGCCCTCTACTACCACTTGTTTCTCCGTCCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FPPRAIQKLAGS*PSTTTCFSVRE Trigger: CTCTCGGACGGAGAAACAAGTGGTAGTAGAGGGGCAGGAGCCAGCCAACTTCTGGATGGCTCTGGGCGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
||
| CDS CCA 72 bp | TTCACCTGTTCCACCTTAGCCACAGAGCCCACAGTGTaGGTTTTGCCGAGGCCTGAGGTCCGGTTGGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: FTCSTLATEPTV*VLPRPEVRLGT Trigger: AGTGCCCAACCGGACCTCAGGCCTCGGCAAAACCCACACTGTGGGCTCTGTGGCTAAGGTGGAACAGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | AGGCGGCTCCTTGCCCATCGTGACCCGGATCTGTACTaGCTCGTCATTGTACTTCTGGTCCAACAGGACGGC | + |
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Preference number: 6 (lower is better) Translates to: RRLLAHRDPDLY*LVIVLLVQQDG Trigger: GCCGTCCTGTTGGACCAGAAGTACAATGACGAGCCAGTACAGATCCGGGTCACGATGGGCAAGGAGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 90 bp | GCGGCCGGCTCCACCACTGAGTCAGAAATAGCAGCCTTCAGTTCTTaGCGTGGGCCCAGCACGTGGTTCATAATTGCCATCAGCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AAGSTTESEIAAFSS*RGPSTWFIIAISCG Trigger: CCCACAGCTGATGGCAATTATGAACCACGTGCTGGGCCCACGCAAAGAACTGAAGGCTGCTATTTCTGACTCAGTGGTGGAGCCGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CAA 90 bp | AACTTCACCTGTTCCACCTTAGCCACAGAGCCCACAGTGTGGGTTTaGCCGAGGCCTGAGGTCCGGTTGGGCACTGTCCACTTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NFTCSTLATEPTVWV*PRPEVRLGTVHFWK Trigger: CTTCCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCCTCGGCAAAACCCACACTGTGGGCTCTGTGGCTAAGGTGGAACAGGTGAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | GGCCCCGTCATTCTGCACCTCAACCTGCGTGCTCGGTaGGTACTGCTTGGCTTTGATGAAGTTCAAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPVILHLNLRAR*VLLGFDEVQGL Trigger: CAGGCCTTGAACTTCATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTTGAGGTGCAGAATGACGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CAA 72 bp | ACCTCAACCTGCGTGCTCGGTGGGTACTGCTTGGCTTaGATGAAGTTCAAGGCCTGGCTCATGGCTCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TSTCVLGGYCLA*MKFKAWLMAPL Trigger: GAGCGGAGCCATGAGCCAGGCCTTGAACTTCATCAAAGCCAAGCAGTACCCACCGAGCACGCAGGTTGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CAA 72 bp | CCCACAGTGTGGGTTTTGCCGAGGCCTGAGGTCCGGTaGGGCACTGTCCACTTCTGGAAGAGTTGTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PTVWVLPRPEVR*GTVHFWKSCWK Trigger: CTTCCAACAACTCTTCCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCCTCGGCAAAACCCACACTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 90 bp | GATCTGTACTGGCTCGTCATTGTACTTCTGGTCCAACAGGACGGCTaGATACGCCGAGGCTGCAATTTCATCCTGGCTGGCCTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DLYWLVIVLLVQQDG*IRRGCNFILAGLAA Trigger: GGCAGCCAGGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGACCAGAAGTACAATGACGAGCCAGTACAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS TCA 72 bp | CAGCTTGAGTGCAGCCTTAGCGGCCGGCTCCACCACTaGGTCAGAAATAGCAGCCTTCAGTTCTTTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: QLECSLSGRLHH*VRNSSLQFFAW Trigger: CCACGCAAAGAACTGAAGGCTGCTATTTCTGACTCAGTGGTGGAGCCGGCCGCTAAGGCTGCACTCAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS TCA 72 bp | GGCTCGTCATTGTACTTCTGGTCCAACAGGACGGCTTaGTACGCCGAGGCTGCAATTTCATCCTGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSSLYFWSNRTA*YAEAAISSWLA Trigger: GGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGACCAGAAGTACAATGACGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS TCA 72 bp | ATGCCGGAAGCCACTCCCCCTTTCCGGATCGTTAAATaGAACTGCGGTGGTGGAGCTGGGGTTTCCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: MPEATPPFRIVK*NCGGGAGVSMR Trigger: CCTCATGGAAACCCCAGCTCCACCACCGCAGTTTCATTTAACGATCCGGAAAGGGGGAGTGGCTTCCGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159749.2 |
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| CDS CCA 72 bp | CCACAGTGTGGGTTTTGCCGAGGCCTGAGGTCCGGTTaGGCACTGTCCACTTCTGGAAGAGTTGTTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PQCGFCRGLRSG*ALSTSGRVVGR Trigger: TCTTCCAACAACTCTTCCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCCTCGGCAAAACCCACACTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | TTGTTGCTTCCATCGAGGCAGGGCAGAGAAGGCAGCTaGAGTCATGCCCAAGGCCCTAGTGAAGTCTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLPSRQGREGS*SHAQGPSEVFG Trigger: ACCGAAGACTTCACTAGGGCCTTGGGCATGACTCCAGCTGCCTTCTCTGCCCTGCCTCGATGGAAGCAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | ACCAGTTTTCCTTCGGAGTCAGACACATGGTACAGCTaGAGTGCAGCCTTAGCGGCCGGCTCCACCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: TSFPSESDTWYS*SAALAAGSTTE Trigger: CTCAGTGGTGGAGCCGGCCGCTAAGGCTGCACTCAAGCTGTACCATGTGTCTGACTCCGAAGGAAAACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS TCA 72 bp | AAGCCACTCCCCCTTTCCGGATCACAAGGCCTTGCTTaGAGTAGCTCCGGAAAGTCTCGCTCTCGTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: KPLPLSGSQGLA*SSSGKSRSRCL Trigger: AAGGCAACGAGAGCGAGACTTTCCGGAGCTACTTCAAGCAAGGCCTTGTGATCCGGAAAGGGGGAGTGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | ATAGCAGCCTTCAGTTCTTTGCGTGGGCCCAGCACGTaGTTCATAATTGCCATCAGCTGTGGGGAGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: IAAFSSLRGPST*FIIAISCGESP Trigger: AGGGGACTCCCCACAGCTGATGGCAATTATGAACCACGTGCTGGGCCCACGCAAAGAACTGAAGGCTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CCA 72 bp | ACGTCCACTTTCGGGCTCATAACCTCGTCAGCAATCTaGCTCCAGTCCCCAGAGTTTCCCAGCTCTGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: TSTFGLITSSAI*LQSPEFPSSAL Trigger: TAAGGCAGAGCTGGGAAACTCTGGGGACTGGAGCCAGATTGCTGACGAGGTTATGAGCCCGAAAGTGGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | TGGCTCGTCATTGTACTTCTGGTCCAACAGGACGGCTaGATACGCCGAGGCTGCAATTTCATCCTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: WLVIVLLVQQDG*IRRGCNFILAG Trigger: GCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCGTCCTGTTGGACCAGAAGTACAATGACGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | CAGGACGGAGTCTTGAGTATGAAGACATCATTGGAGTaGAGGGACGTGGCCCGGGCTGTCACCTCAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QDGVLSMKTSLE*RDVARAVTSKA Trigger: GGCTTTTGAGGTGACAGCCCGGGCCACGTCCCTCAACTCCAATGATGTCTTCATACTCAAGACTCCGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | CTGGTTGGAGCACTCGAAGAGCCGAGGAGTGATGACTaGGTTTTCCTCCTGCAGCCTCTTGGTGTTGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: LVGALEEPRSDD*VFLLQPLGVGV Trigger: TACGCCAACACCAAGAGGCTGCAGGAGGAAAACCAAGTCATCACTCCTCGGCTCTTCGAGTGCTCCAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | TCAAAGATCTCTGTGGCCAGAAAGCGTCCGGTCTGGTaGGAGCACTCGAAGAGCCGAGGAGTGATGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SKISVARKRPVW*EHSKSRGVMTW Trigger: CCAAGTCATCACTCCTCGGCTCTTCGAGTGCTCCAACCAGACCGGACGCTTTCTGGCCACAGAGATCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 90 bp | CAGAGCCATCCAGAAGTTGGCTGGCTCCTGCCCCTCTACTACCACTaGTTTCTCCGTCCGAGAGATGGTATCAGCAACCATCTTGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QSHPEVGWLLPLYYH*FLRPRDGISNHLGH Trigger: ATGGCCAAGATGGTTGCTGATACCATCTCTCGGACGGAGAAACAAGTGGTAGTAGAGGGGCAGGAGCCAGCCAACTTCTGGATGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | CGGCTTGATACGCCGAGGCTGCAATTTCATCCTGGCTaGCCTGGCTGCCCTGCCAGATATATAACAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RLDTPRLQFHPG*PGCPARYITSS Trigger: ACTACTTGTTATATATCTGGCAGGGCAGCCAGGCCAGCCAGGATGAAATTGCAGCCTCGGCGTATCAAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | AAGTCAAAGATCTCTGTGGCCAGAAAGCGTCCGGTCTaGTTGGAGCACTCGAAGAGCCGAGGAGTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: KSKISVARKRPV*LEHSKSRGVMT Trigger: AGTCATCACTCCTCGGCTCTTCGAGTGCTCCAACCAGACCGGACGCTTTCTGGCCACAGAGATCTTTGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS TCA 72 bp | AAAGCCTTGGTGTTATCAGCATTGGTCCCTCGGACCTaGAATAGCCTCGTAGAGGGCACAGGCTCCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KALVLSALVPRT*NSLVEGTGSKL Trigger: CAACTTGGAGCCTGTGCCCTCTACGAGGCTATTTCAGGTCCGAGGGACCAATGCTGATAACACCAAGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CCA 72 bp | GCCCCTCTACTACCACTTGTTTCTCCGTCCGAGAGATaGTATCAGCAACCATCTTGGCCATCTCCCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: APLLPLVSPSER*YQQPSWPSPSH Trigger: ATGAGAGGGAGATGGCCAAGATGGTTGCTGATACCATCTCTCGGACGGAGAAACAAGTGGTAGTAGAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 90 bp | TTCCAGGACATTTCCACCTCTCCAGCCAGCACATTCCTCTTGCCCTaGACGTGCAACAGTCGCTGGACATCACAGGAGTTTGTTTCTACG | + |
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Preference number: 6 (lower is better) Translates to: FQDISTSPASTFLLP*TCNSRWTSQEFVST Trigger: CGTAGAAACAAACTCCTGTGATGTCCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATGTGCTGGCTGGAGAGGTGGAAATGTCCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CAA 90 bp | AAACTCTTCCAGGACATTTCCACCTCTCCAGCCAGCACATTCCTCTaGCCCTTGACGTGCAACAGTCGCTGGACATCACAGGAGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KLFQDISTSPASTFL*PLTCNSRWTSQEFV Trigger: AACAAACTCCTGTGATGTCCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATGTGCTGGCTGGAGAGGTGGAAATGTCCTGGAAGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CAA 90 bp | ACCACGATGATAGGGGTCTCAAGGTCTCGGTTTCCAGGGTGGGTCTaGAGGTATTCTTGTACAGTTGTAGCTGCAGCCTTCTTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TTMIGVSRSRFPGWV*RYSCTVVAAAFFSS Trigger: GGAAGAGAAGAAGGCTGCAGCTACAACTGTACAAGAATACCTCAAGACCCACCCTGGAAACCGAGACCTTGAGACCCCTATCATCGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS TCA 72 bp | ATAGGAACACATCCTCCTCCTCCAGGTCATCCTGATTaGAGTCAAAGATCTCTGTGGCCAGAAAGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: IGTHPPPPGHPD*SQRSLWPESVR Trigger: CCGGACGCTTTCTGGCCACAGAGATCTTTGACTTCAATCAGGATGACCTGGAGGAGGAGGATGTGTTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | GTCCAGGATGTAACAGTCCTCATGCTTGAGCAGGTCTaGTGTGAGTGGCCGAGTAGCAACTTCTCTAACCAC | + |
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Preference number: 6 (lower is better) Translates to: VQDVTVLMLEQV*CEWPSSNFSNH Trigger: GTGGTTAGAGAAGTTGCTACTCGGCCACTCACACAAGACCTGCTCAAGCATGAGGACTGTTACATCCTGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027366.13 ENSMUST00000159749.2 |
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| CDS CCA 72 bp | ACGATGATAGGGGTCTCAAGGTCTCGGTTTCCAGGGTaGGTCTTGAGGTATTCTTGTACAGTTGTAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TMIGVSRSRFPG*VLRYSCTVVAA Trigger: TGCAGCTACAACTGTACAAGAATACCTCAAGACCCACCCTGGAAACCGAGACCTTGAGACCCCTATCATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS TCA 72 bp | TCCAATAGGAACACATCCTCCTCCTCCAGGTCATCCTaGTTGAAGTCAAAGATCTCTGTGGCCAGAAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: SNRNTSSSSRSS*LKSKISVARKR Trigger: ACGCTTTCTGGCCACAGAGATCTTTGACTTCAATCAGGATGACCTGGAGGAGGAGGATGTGTTCCTATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS GCA 72 bp | AGGGTGGGTCTTGAGGTATTCTTGTACAGTTGTAGCTaGAGCCTTCTTCTCTTCCTCATTGGCATGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RVGLEVFLYSCS*SLLLFLIGMFP Trigger: GGGAAACATGCCAATGAGGAAGAGAAGAAGGCTGCAGCTACAACTGTACAAGAATACCTCAAGACCCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 72 bp | TGTACAGTTGTAGCTGCAGCCTTCTTCTCTTCCTCATaGGCATGTTTCCCTATCCAGAAGAAGACCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CTVVAAAFFSSS*ACFPIQKKTWS Trigger: GGACCAGGTCTTCTTCTGGATAGGGAAACATGCCAATGAGGAAGAGAAGAAGGCTGCAGCTACAACTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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| CDS CAA 90 bp | AGGTATTCTTGTACAGTTGTAGCTGCAGCCTTCTTCTCTTCCTCATaGGCATGTTTCCCTATCCAGAAGAAGACCTGGTCCCAGACATCC | + |
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Preference number: 6 (lower is better) Translates to: RYSCTVVAAAFFSSS*ACFPIQKKTWSQTS Trigger: GGATGTCTGGGACCAGGTCTTCTTCTGGATAGGGAAACATGCCAATGAGGAAGAGAAGAAGGCTGCAGCTACAACTGTACAAGAATACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027366.13 |
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