Pregenerated sensors for VGLL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030315Ensembl transcript IDs: ENSMUST00000032459.14, ENSMUST00000139640.2, ENSMUST00000147639.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGCACAAAGCGTCCGGATCCCCATGTCGTCATGGCTTGTGACTaGGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGCAGACCTGCA | + |
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Preference number: 1 (lower is better) Translates to: KSTKRPDPHVVMACD*ERAAGSRLPGGRPA Trigger: TGCAGGTCTGCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAGCCATGACGACATGGGGATCCGGACGCTTTGTGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 90 bp | CACTACGGAGTCCTCCAGCCTTGTCCCCGGCCTCACAGACTGCAGTaGTCAGAGAAGGGAAATGCCCATGGTCAGGGGGAGTCTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: HYGVLQPCPRPHRLQ*SEKGNAHGQGESAV Trigger: GACTGCAGACTCCCCCTGACCATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTGGAGGACTCCGTAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR CCA 90 bp | TCCCCGGCCTCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATaGTCAGGGGGAGTCTGCAGTCCAGCTGTGAGCACCTCAAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: SPASQTAVLREGKCP*SGGVCSPAVSTSSL Trigger: TAGGCTTGAGGTGCTCACAGCTGGACTGCAGACTCCCCCTGACCATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 90 bp | CAGACCTGCAGAGGTTTCTTTGGTAACCGGGGCAGGGAGCAAGGATaGTCTGCTGGACTTAATGCTCCGTGCTGTTCTGTTGCCACACTG | + |
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Preference number: 1 (lower is better) Translates to: QTCRGFFGNRGREQG*SAGLNAPCCSVATL Trigger: CAGTGTGGCAACAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGTTACCAAAGAAACCTCTGCAGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR TCA 90 bp | CAAATCAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTaGGCCAGGCTCAGGTGGAAGCCAAGCTGTGCATACCCGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: QIRTVVFRQTHANAD*ARLRWKPSCAYPAT Trigger: TGTGGCCGGGTATGCACAGCTTGGCTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 90 bp | CGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATGCAAATaGAGACTGAGCCAGGCTCAGGTGGAAGCCAAGCTGTGCATACCC | + |
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Preference number: 1 (lower is better) Translates to: RSANQDSCLQADTCK*RLSQAQVEAKLCIP Trigger: GGGTATGCACAGCTTGGCTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR TCA 90 bp | GATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGTTGCCACACTaGGGCCCCTTGTATGAACACCAAGCAAGTATAAAACAGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: DALLDLMLRAVLLPH*GPLYEHQASIKQSR Trigger: TCTGCTCTGTTTTATACTTGCTTGGTGTTCATACAAGGGGCCTCAGTGTGGCAACAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGACTGAGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGCAGACCTGCAGTCCGTGCTGTTCTGTTaGCACACTGAGGCCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LVTEKGRQGPGCQVADLQSVLFC*HTEAPC Trigger: ACAAGGGGCCTCAGTGTGGCAACAGAACAGCACGGA...CTGCAGGTCTGCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCTCAGACAGCTGCCCAGCAGGCAGCTCTGCCCTCCGTAGTGCAAATCCATGCAAATGCAGACTaGGCCAGGCTCAGGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LASQTAAQQAALPSVVQIHANAD*ARLRWK Trigger: CTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATG...GATTTGCACTACGGAGGGCAGAGCTGCCTGCTGGGCAGCTGTCTGAGATGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGGTGGCAGACCTGCAGAGGTTTCTTTGGTAACCGGGGCAGGGAGCAAGATGCAGATTCCTGTGTaGTCGAAGGGTGGTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LPGGRPAEVSLVTGAGSKMQIPV*SKGGSP Trigger: GGGGGAACCACCCTTCGACCACACAGGAATCTGCAT...CTTGCTCCCTGCCCCGGTTACCAAAGAAACCTCTGCAGGTCTGCCACCTGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTTGTCCCCGGCCTCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATAGCTCAGGCAAACCATaGAGATTCCTGTGTGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: QPCPRPHRLQCSEKGNAHSSGKP*RFLCGR Trigger: TCGACCACACAGGAATCTGCATGGTTTGCCTGAGCT...ATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTGTCCCCGGCCTCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATATCCCCATGTCGTCATaGCTTGTGACTGAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QPCPRPHRLQCSEKGNAHIPMSS*LVTEKG Trigger: CCCTTTCTCAGTCACAAGCCATGACGACATGGGGAT...ATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR CAA 90 bp | CAGCAACAATGCAAGCACACATGGTCAGAAGTATTCCCTAGCAGTTaGCCCTCAGTACTGGCATCTCAGACAGCTGCCCAGCAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QQQCKHTWSEVFPSS*PSVLASQTAAQQAA Trigger: AGCTGCCTGCTGGGCAGCTGTCTGAGATGCCAGTACTGAGGGCAAACTGCTAGGGAATACTTCTGACCATGTGTGCTTGCATTGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTCTGCCCTCCGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATGGCAGGGAGCAAGGATaGTCTGCTGGACTTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: AALPSVVQIRTVVFRQTHGREQG*SAGLNA Trigger: AGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCC...ATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACGGAGGGCAGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGCAGACACATGCAAATGCAGACTGAGCCAGGCTCAGGTGGAAGCCAAGCTGAGGCCCCTTGTATaGACACCAAGCAAGTATAAA | + |
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Preference number: 2 (lower is better) Translates to: LQADTCKCRLSQAQVEAKLRPLV*TPSKYK Trigger: TTTATACTTGCTTGGTGTTCATACAAGGGGCCTCAG...CTTGGCTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR TCA 72 bp | AAGCGTCCGGATCCCCATGTCGTCATGGCTTGTGACTaGGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: KRPDPHVVMACD*ERAAGSRLPGG Trigger: GCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAGCCATGACGACATGGGGATCCGGACGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR TCA 72 bp | CACAAAGCGTCCGGATCCCCATGTCGTCATGGCTTGTaGCTGAGAAAGGGCGGCAGGGTCCCGGCTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HKASGSPCRHGL*LRKGGRVPAAR Trigger: CCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAGCCATGACGACATGGGGATCCGGACGCTTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 72 bp | GTCCTCCAGCCTTGTCCCCGGCCTCACAGACTGCAGTaGTCAGAGAAGGGAAATGCCCATGGTCAGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VLQPCPRPHRLQ*SEKGNAHGQGE Trigger: CTCCCCCTGACCATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTGGAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR CCA 72 bp | TCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATaGTCAGGGGGAGTCTGCAGTCCAGCTGTGAGCACC | + |
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Preference number: 3 (lower is better) Translates to: SQTAVLREGKCP*SGGVCSPAVST Trigger: GGTGCTCACAGCTGGACTGCAGACTCCCCCTGACCATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR CCA 72 bp | GGTCAGAAGTATTCCCTAGCAGTTTGCCCTCAGTACTaGCATCTCAGACAGCTGCCCAGCAGGCAGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQKYSLAVCPQY*HLRQLPSRQLC Trigger: GCAGAGCTGCCTGCTGGGCAGCTGTCTGAGATGCCAGTACTGAGGGCAAACTGCTAGGGAATACTTCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR-3UTR CAA 90 bp | CTAGCAGTTTGCCCTCAGTACTGGCATCTCAGACAGCTGCCCAGCAGGCAGCTCTGCAAATCAGGACAGTaGTCTTCAGGCAGACACATG | + |
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Preference number: 3 (lower is better) Translates to: LAVCPQYWHLRQLPSRQLCKSGQ*SSGRHM Trigger: CATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCA...GAGCTGCCTGCTGGGCAGCTGTCTGAGATGCCAGTACTGAGGGCAAACTGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 72 bp | AGAGGTTTCTTTGGTAACCGGGGCAGGGAGCAAGGATaGTCTGCTGGACTTAATGCTCCGTGCTGTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: RGFFGNRGREQG*SAGLNAPCCSV Trigger: AACAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGTTACCAAAGAAACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR GCA 72 bp | AGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATaGAAATGCAGACTGAGCCAGGCTCAGGTGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SANQDSCLQADT*KCRLSQAQVEA Trigger: GGCTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR TCA 72 bp | CTGGACTTAATGCTCCGTGCTGTTCTGTTGCCACACTaGGGCCCCTTGTATGAACACCAAGCAAGTATAAAA | + |
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Preference number: 3 (lower is better) Translates to: LDLMLRAVLLPH*GPLYEHQASIK Trigger: TTTTATACTTGCTTGGTGTTCATACAAGGGGCCTCAGTGTGGCAACAGAACAGCACGGAGCATTAAGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | CTTGTGACTGAGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGCAGACCTGCAGCTCCGGGCTGCTGGATaGGCTGTCCTTGGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LVTEKGRQGPGCQVADLQLRAAG*AVLGCF Trigger: AAAGCAGCCAAGGACAGCGCATCCAGCAGCCCGGAG...CTGCAGGTCTGCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGTCCTCTTGCTGGGGCTaGTGGGAGGCGGGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: TGAGSKDALLDLMLRAVLSSCWG*WEAGLC Trigger: GCACAGGCCCGCCTCCCATCAGCCCCAGCAAGAGGA...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | CTTGTGACTGAGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGCAGACCTGCAGTGTGCGATGGGACAGTaGGAGAGGTTGCAGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LVTEKGRQGPGCQVADLQCAMGQ*ERLQLR Trigger: CCGCAACTGCAACCTCTCTCACTGTCCCATCGCACA...CTGCAGGTCTGCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | CTTGTGACTGAGAAAGGGCGGCAGGGTCCCGGCTGCCAGGTGGCAGACCTGCAGTCCTGGGTTCTCCCCTaGGGGAAGCTTCACCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVTEKGRQGPGCQVADLQSWVLP*GKLHLH Trigger: ATGAAGGTGAAGCTTCCCTCAGGGGAGAACCCAGGA...CTGCAGGTCTGCCACCTGGCAGCCGGGACCCTGCCGCCCTTTCTCAGTCACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGGCCACCGGGAGGGTCTaGATCCTGGGTTCTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TGAGSKDALLDLMLRAVLATGRV*ILGSPL Trigger: CAGGGGAGAACCCAGGATGCAGACCCTCCCGGTGGC...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| 3UTR CAA 72 bp | TCCCGGCTGCCAGGTGGCAGACCTGCAGAGGTTTCTTaGGTAACCGGGGCAGGGAGCAAGGATGCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRLPGGRPAEVS*VTGAGSKDALL Trigger: CAGCAGAGCATCCTTGCTCCCTGCCCCGGTTACCAAAGAAACCTCTGCAGGTCTGCCACCTGGCAGCCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | CAGCCTTGTCCCCGGCCTCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATCCCCGGGCTCCATGCTaGATTTCCTCTTGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QPCPRPHRLQCSEKGNAHPRAPC*ISSCWG Trigger: GCCCCAGCAAGAGGAAATTCAGCATGGAGCCCGGGG...ATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGTGGCAGACCTGCAGAGGTTTCTTTGGTAACCGGGGCAGGGAGCAAGCCACAGGGTCACAGGTaGCAGTTGCACTGGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPGGRPAEVSLVTGAGSKPQGHR*QLHWVV Trigger: GACCACCCAGTGCAACTGCCACCTGTGACCCTGTGG...CTTGCTCCCTGCCCCGGTTACCAAAGAAACCTCTGCAGGTCTGCCACCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | CGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTGGGCGGGCCTGTGCGGTaGCTGCTGAGCGCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSANQDSCLQADTCKCRLGGPVR*LLSAEA Trigger: GGCCTCTGCGCTCAGCAGTCACCGCACAGGCCCGCC...CAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGACCACAGAGGGGGAGTaGCTATGGCTGACCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: TGAGSKDALLDLMLRAVLTTEGE*LWLTMW Trigger: CCACATGGTCAGCCATAGTCACTCCCCCTCTGTGGT...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTCTGTGCGGTGACTGCTaGGCGCAGAGGCCACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: AEQKSRQHGFANKPPTHPLCGDC*AQRPPG Trigger: TCCCGGTGGCCTCTGCGCTCAGCAGTCACCGCACAG...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGGCTCCACAGCTGACCTaGCTGTGTCACTGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TGAGSKDALLDLMLRAVLAPQLT*LCHCCS Trigger: AGAACAGCAGTGACACAGGCAGGTCAGCTGTGGAGC...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | CAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTGAGCCAGGCTCAGGAGAGAGGTTGCAGTTaGGGGCACCCGCGGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: QDSCLQADTCKCRLSQAQERGCS*GHPRMH Trigger: GTGCATCCGCGGGTGCCCGCAACTGCAACCTCTCTC...CTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | AAGCTAAGAGCACAAAGCGTCCGGATCCCCATGTCGTCATGGCTTGTGACTGAGCAAGAGGCTGCTCCATaGGGCTGGGGAGAGATGCGT | + |
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Preference number: 4 (lower is better) Translates to: KLRAQSVRIPMSSWLVTEQEAAP*GWGEMR Trigger: ACGCATCTCTCCCCAGCCTCATGGAGCAGCCTCTTG...CTCAGTCACAAGCCATGACGACATGGGGATCCGGACGCTTTGTGCTCTTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | AGCACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATTCCTGTGTGGTCGAAGCCCGTTCAATGGGACTaGGGCTCCGCTCCCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: STDCSKLRQTMQIPVWSKPVQWD*GSAPGD Trigger: ATCCCCGGGAGCGGAGCCGCAGTCCCATTGAACGGG...CTTCGACCACACAGGAATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR GCA 90 bp | AAGCTAAGAGCACAAAGCGTCCGGATCCCCATGTCGTCATGGCTTGTGACTGAGGTCAGGGCAAGAGGCTaGTCCATGAGGCTGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KLRAQSVRIPMSSWLVTEVRARG*SMRLGR Trigger: TCTCCCCAGCCTCATGGAGCAGCCTCTTGCCCTGAC...CTCAGTCACAAGCCATGACGACATGGGGATCCGGACGCTTTGTGCTCTTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTCTGCAGCCCGTTCAATaGGACTGCGGCTCCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AEQKSRQHGFANKPPTHPLQPVQ*DCGSAP Trigger: GGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAG...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTGTGGTCTCCGGTAGCTaGCAGACCCAGGCGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: AEQKSRQHGFANKPPTHPVVSGS*QTQAQN Trigger: GTTCTGCGCCTGGGTCTGCCAGCTACCGGAGACCAC...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGAGTGCTTTGGCAAAGTaGTCATCCACTGAGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGAGSKDALLDLMLRAVLSALAK*SSTEPV Trigger: CACTGGCTCAGTGGATGACCACTTTGCCAAAGCACT...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | TCAAAGCTCAGGCAAACCATGCAGATTCCTGTGTGGTCGAAGGGTGGTTCCCCCAAAGTGGTCATCCACTaGGCCAGTGATGGACACCGA | + |
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Preference number: 4 (lower is better) Translates to: SKLRQTMQIPVWSKGGSPKVVIH*ASDGHR Trigger: TCGGTGTCCATCACTGGCTCAGTGGATGACCACTTT...GGGGGAACCACCCTTCGACCACACAGGAATCTGCATGGTTTGCCTGAGCTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | CGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTGGGGAGTGACTATGGCTaGCCATGTGGGCAGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSANQDSCLQADTCKCRLGSDYG*PCGQWG Trigger: GCCCCACTGCCCACATGGTCAGCCATAGTCACTCCC...CAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | CGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTGCTATGGCTGACCATGTaGGCAGTGGGGCTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSANQDSCLQADTCKCRLLWLTM*AVGLAG Trigger: GCCAGCCAGCCCCACTGCCCACATGGTCAGCCATAG...CAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | GCAGCTCTGCCCTCCGTAGTGCAAATCAGGACAGTTGTCTTCAGGCAGACACATTGCGGCAGTCTCCGTTaGCAGTCTTATTCAAATGGG | + |
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Preference number: 4 (lower is better) Translates to: AALPSVVQIRTVVFRQTHCGSLR*QSYSNG Trigger: CCCATTTGAATAAGACTGTCAACGGAGACTGCCGCA...ATGTGTCTGCCTGAAGACAACTGTCCTGATTTGCACTACGGAGGGCAGAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTTGTCTTCAGGCAGACACATGCAAATGCAGACTGAGCCAGGCTCAGAGATGCGGCTCATCTTaGAGACGTGGTCGTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QDSCLQADTCKCRLSQAQRCGSS*RRGRFH Trigger: GTGAAAACGACCACGTCTCCAAGATGAGCCGCATCT...CTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAGACAACTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CCA 90 bp | TCAAAGCTCAGGCAAACCATGCAGATTCCTGTGTGGTCGAAGGGTGGTTCCCCCTGTCACCTAGTGCTTTaGCAAAGTGGTCATCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SKLRQTMQIPVWSKGGSPCHLVL*QSGHPL Trigger: CAGTGGATGACCACTTTGCCAAAGCACTAGGTGACA...GGGGGAACCACCCTTCGACCACACAGGAATCTGCATGGTTTGCCTGAGCTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTTATTCAAATGGGGGCTaGAGATGCGGCTCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AEQKSRQHGFANKPPTHPYSNGG*RCGSSW Trigger: CCAAGATGAGCCGCATCTTCAGCCCCCATTTGAATA...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR TCA 90 bp | ACCTCAAGCCTAGAGAAAGACCTAGAACCTGCTAGAGACCCTCTAAGTTCAGCATTGGCTGCTTTGATCTaGAGCCATGTGTCACCTAGT | + |
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Preference number: 4 (lower is better) Translates to: TSSLEKDLEPARDPLSSALAALI*SHVSPS Trigger: ACTAGGTGACACATGGCTTCAGATCAAAGCAGCCAA...TGCTGAACTTAGAGGGTCTCTAGCAGGTTCTAGGTCTTTCTCTAGGCTTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS CCA 90 bp | GGTGGCCACCATGCAAGCTCACGGCGGGGGCTGCAGCCCGTTCAATaGGACTGCGGCTCCGCTCCCGGGGATCTCTGCGGCAGTCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: GGHHASSRRGLQPVQ*DCGSAPGDLCGSLR Trigger: ACGGAGACTGCCGCAGAGATCCCCGGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 90 bp | GAGAGATGCGTACAGGTGGCCACCATGCAAGCTCACGGCGGGGGCTaGAGCCCGTTCAATGGGACTGCGGCTCCGCTCCCGGGGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: ERCVQVATMQAHGGG*SPFNGTAAPLPGIS Trigger: AGAGATCCCCGGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTACGCATCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 90 bp | GGCTGCTCCATGAGGCTGGGGAGAGATGCGTACAGGTGGCCACCATaGAAGCTCACGGCGGGGGCTGCAGCCCGTTCAATGGGACTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GCSMRLGRDAYRWPP*KLTAGAAARSMGLR Trigger: CCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTACGCATCTCTCCCCAGCCTCATGGAGCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 90 bp | AGGGCAAGAGGCTGCTCCATGAGGCTGGGGAGAGATGCGTACAGGTaGCCACCATGCAAGCTCACGGCGGGGGCTGCAGCCCGTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: RARGCSMRLGRDAYR*PPCKLTAGAAARSM Trigger: CATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTACGCATCTCTCCCCAGCCTCATGGAGCAGCCTCTTGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 90 bp | TCCGGTAGCTGGCAGACCCAGGCGCAGAACAGCCACTGTGTGCGATaGGACAGTGAGAGAGGTTGCAGTTGCGGGCACCCGCGGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SGSWQTQAQNSHCVR*DSERGCSCGHPRMH Trigger: GTGCATCCGCGGGTGCCCGCAACTGCAACCTCTCTCACTGTCCCATCGCACACAGTGGCTGTTCTGCGCCTGGGTCTGCCAGCTACCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 90 bp | TGCGATGGGACAGTGAGAGAGGTTGCAGTTGCGGGCACCCGCGGATaGACAGGTAATCACAGAGGGCCGGTTCTGCTGCCGCTCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: CDGTVREVAVAGTRG*TGNHRGPVLLPLHS Trigger: GCTGTGGAGCGGCAGCAGAACCGGCCCTCTGTGATTACCTGTGCATCCGCGGGTGCCCGCAACTGCAACCTCTCTCACTGTCCCATCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 90 bp | CCACAGGGTCACAGGTGGCAGTTGCACTGGGTGGTCTCCGGTAGCTaGCAGACCCAGGCGCAGAACAGCCACTGTGTGCGATGGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: PQGHRWQLHWVVSGS*QTQAQNSHCVRWDS Trigger: ACTGTCCCATCGCACACAGTGGCTGTTCTGCGCCTGGGTCTGCCAGCTACCGGAGACCACCCAGTGCAACTGCCACCTGTGACCCTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032459.14 ENSMUST00000147639.8 |
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| CDS GCA 90 bp | GCTGACCTGCCTGTGTCACTGCTGTTCTTAGTCAGGGCAAGAGGCTaGTCCATGAGGCTGGGGAGAGATGCGTACAGGTGGCCACCATGC | + |
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Preference number: 5 (lower is better) Translates to: ADLPVSLLFLVRARG*SMRLGRDAYRWPPC Trigger: GCATGGTGGCCACCTGTACGCATCTCTCCCCAGCCTCATGGAGCAGCCTCTTGCCCTGACTAAGAACAGCAGTGACACAGGCAGGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS TCA 90 bp | TGCACAGGTAATCACAGAGGGCCGGTTCTGCTGCCGCTCCACAGCTaGCCTGCCTGTGTCACTGCTGTTCTTAGTCAGGGCAAGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CTGNHRGPVLLPLHS*PACVTAVLSQGKRL Trigger: CAGCCTCTTGCCCTGACTAAGAACAGCAGTGACACAGGCAGGTCAGCTGTGGAGCGGCAGCAGAACCGGCCCTCTGTGATTACCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 90 bp | CTGGGTTCTCCCCTGAGGGAAGCTTCACGTTTTTCATCATCTGCATaGACCAGAGAGGCTGCCCTGGACAACACATCCAGCGGTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LGSPLREASRFSSSA*TREAALDNTSSGVS Trigger: GGAGACACCGCTGGATGTGTTGTCCAGGGCAGCCTCTCTGGTGCATGCAGATGATGAAAAACGTGAAGCTTCCCTCAGGGGAGAACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS TCA 90 bp | GCTGACTCCGGGCTGCTGGATGCGCTGTCCTTGGCTGCTTTGATCTaGAGCCATGTGTCACCTAGTGCTTTGGCAAAGTGGTCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ADSGLLDALSLAALI*SHVSPSALAKWSST Trigger: AGTGGATGACCACTTTGCCAAAGCACTAGGTGACACATGGCTTCAGATCAAAGCAGCCAAGGACAGCGCATCCAGCAGCCCGGAGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | CAGCCTTGTCCCCGGCCTCACAGACTGCAGTGCTCAGAGAAGGGAAATGCCCATAAGATGCGGCTCATCTaGGAGACGTGGTCGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPCPRPHRLQCSEKGNAHKMRLI*ETWSFS Trigger: TGAAAACGACCACGTCTCCAAGATGAGCCGCATCTT...ATGGGCATTTCCCTTCTCTGAGCACTGCAGTCTGTGAGGCCGGGGACAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTGGTCACAGGTGGCAGTaGCACTGGGTGGTCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AEQKSRQHGFANKPPTHPGHRWQ*HWVVSG Trigger: ACCGGAGACCACCCAGTGCAACTGCCACCTGTGACC...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | CTAGCAGTTTGCCCTCAGTACTGGCATCTCAGACAGCTGCCCAGCAGGCAGCTCGTGTCACCTAGTGCTTaGGCAAAGTGGTCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LAVCPQYWHLRQLPSRQLVSPSA*AKWSST Trigger: AGTGGATGACCACTTTGCCAAAGCACTAGGTGACAC...GAGCTGCCTGCTGGGCAGCTGTCTGAGATGCCAGTACTGAGGGCAAACTGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAAGTCCAGACAACATGGTTTTGCGAATAAACCACCCACCCACCCTTCACAGTCCAAGTCCTaGTCCCCGGGCTCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEQKSRQHGFANKPPTHPSQSKS*SPGSML Trigger: CAGCATGGAGCCCGGGGACAAGGACTTGGACTGTGA...AGGGTGGGTGGGTGGTTTATTCGCAAAACCATGTTGTCTGGACTTCTGTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | ACCGGGGCAGGGAGCAAGGATGCTCTGCTGGACTTAATGCTCCGTGCTGTTCTGCACAGAACGCCGATATaGTTGTTCATCTTGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGAGSKDALLDLMLRAVLHRTPI*LFILSK Trigger: CTTGGACAAGATGAACAACAATATCGGCGTTCTGTG...CAGAACAGCACGGAGCATTAAGTCCAGCAGAGCATCCTTGCTCCCTGCCCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | CTTCAGGCAGACACATGCAAATGCAGACTGAGCCAGGCTCAGGTGGAAGCCAAGCTGCGGCAGTCTCCGTaGACAGTCTTATTCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: LQADTCKCRLSQAQVEAKLRQSP*TVLFKW Trigger: CCATTTGAATAAGACTGTCAACGGAGACTGCCGCAG...CTTGGCTTCCACCTGAGCCTGGCTCAGTCTGCATTTGCATGTGTCTGCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS-3UTR CAA 90 bp | AGCACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATTCCTGTGTGGTCGAAGAGAACGCCGATATTGTaGTTCATCTTGTCCAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: STDCSKLRQTMQIPVWSKRTPIL*FILSKY Trigger: ATACTTGGACAAGATGAACAACAATATCGGCGTTCT...CTTCGACCACACAGGAATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS GCA 72 bp | AGCTCACGGCGGGGGCTGCAGCCCGTTCAATGGGACTaGGGCTCCGCTCCCGGGGATCTCTGCGGCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSRRGLQPVQWD*GSAPGDLCGSL Trigger: GAGACTGCCGCAGAGATCCCCGGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | CATGCAAGCTCACGGCGGGGGCTGCAGCCCGTTCAATaGGACTGCGGCTCCGCTCCCGGGGATCTCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: HASSRRGLQPVQ*DCGSAPGDLCG Trigger: GCCGCAGAGATCCCCGGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 72 bp | GTACAGGTGGCCACCATGCAAGCTCACGGCGGGGGCTaGAGCCCGTTCAATGGGACTGCGGCTCCGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VQVATMQAHGGG*SPFNGTAAPLP Trigger: CGGGAGCGGAGCCGCAGTCCCATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | GGCTGCTCCATGAGGCTGGGGAGAGATGCGTACAGGTaGCCACCATGCAAGCTCACGGCGGGGGCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCSMRLGRDAYR*PPCKLTAGAAA Trigger: GGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTACGCATCTCTCCCCAGCCTCATGGAGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 72 bp | ATGAGGCTGGGGAGAGATGCGTACAGGTGGCCACCATaGAAGCTCACGGCGGGGGCTGCAGCCCGTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MRLGRDAYRWPP*KLTAGAAARSM Trigger: CATTGAACGGGCTGCAGCCCCCGCCGTGAGCTTGCATGGTGGCCACCTGTACGCATCTCTCCCCAGCCTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS GCA 72 bp | CCCGCGGATGCACAGGTAATCACAGAGGGCCGGTTCTaGTGCCGCTCCACAGCTGACCTGCCTGTGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PADAQVITEGRF*CRSTADLPVSL Trigger: CAGTGACACAGGCAGGTCAGCTGTGGAGCGGCAGCAGAACCGGCCCTCTGTGATTACCTGTGCATCCGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | TGGCAGACCCAGGCGCAGAACAGCCACTGTGTGCGATaGGACAGTGAGAGAGGTTGCAGTTGCGGGCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: WQTQAQNSHCVR*DSERGCSCGHP Trigger: CGGGTGCCCGCAACTGCAACCTCTCTCACTGTCCCATCGCACACAGTGGCTGTTCTGCGCCTGGGTCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | CACAGGTGGCAGTTGCACTGGGTGGTCTCCGGTAGCTaGCAGACCCAGGCGCAGAACAGCCACTGTGTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: HRWQLHWVVSGS*QTQAQNSHCVR Trigger: TCGCACACAGTGGCTGTTCTGCGCCTGGGTCTGCCAGCTACCGGAGACCACCCAGTGCAACTGCCACCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032459.14 ENSMUST00000147639.8 |
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| CDS GCA 72 bp | ACAGTGAGAGAGGTTGCAGTTGCGGGCACCCGCGGATaGACAGGTAATCACAGAGGGCCGGTTCTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TVREVAVAGTRG*TGNHRGPVLLP Trigger: CGGCAGCAGAACCGGCCCTCTGTGATTACCTGTGCATCCGCGGGTGCCCGCAACTGCAACCTCTCTCACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | TTCCACCACAGGGTCACAGGTGGCAGTTGCACTGGGTaGTCTCCGGTAGCTGGCAGACCCAGGCGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: FHHRVTGGSCTG*SPVAGRPRRRT Trigger: TGTTCTGCGCCTGGGTCTGCCAGCTACCGGAGACCACCCAGTGCAACTGCCACCTGTGACCCTGTGGTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032459.14 ENSMUST00000147639.8 |
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| CDS CCA 72 bp | TCCGACGGAAGTGCTCTTCCACCACAGGGTCACAGGTaGCAGTTGCACTGGGTGGTCTCCGGTAGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDGSALPPQGHR*QLHWVVSGSWQ Trigger: CTGCCAGCTACCGGAGACCACCCAGTGCAACTGCCACCTGTGACCCTGTGGTGGAAGAGCACTTCCGTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032459.14 ENSMUST00000147639.8 |
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| CDS TCA 72 bp | AGGCCACCGGGAGGGTCTGCATCCTGGGTTCTCCCCTaGGGGAAGCTTCACCTTCATAGCACAGAACGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RPPGGSASWVLP*GKLHLHSTERR Trigger: TCGGCGTTCTGTGCTATGAAGGTGAAGCTTCCCTCAGGGGAGAACCCAGGATGCAGACCCTCCCGGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS CAA 72 bp | CGGCTCCGCTCCCGGGGATCTCTGCGGCAGTCTCCGTaGACAGTCTTATTCAAATGGGGGCTGAAGATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRSRGSLRQSP*TVLFKWGLKMR Trigger: CCGCATCTTCAGCCCCCATTTGAATAAGACTGTCAACGGAGACTGCCGCAGAGATCCCCGGGAGCGGAGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS TCA 72 bp | AATCACAGAGGGCCGGTTCTGCTGCCGCTCCACAGCTaGCCTGCCTGTGTCACTGCTGTTCTTAGTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHRGPVLLPLHS*PACVTAVLSQG Trigger: GCCCTGACTAAGAACAGCAGTGACACAGGCAGGTCAGCTGTGGAGCGGCAGCAGAACCGGCCCTCTGTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CAA 90 bp | ATGGGACTGCGGCTCCGCTCCCGGGGATCTCTGCGGCAGTCTCCGTaGACAGTCTTATTCAAATGGGGGCTGAAGATGCGGCTCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MGLRLRSRGSLRQSP*TVLFKWGLKMRLIL Trigger: CAAGATGAGCCGCATCTTCAGCCCCCATTTGAATAAGACTGTCAACGGAGACTGCCGCAGAGATCCCCGGGAGCGGAGCCGCAGTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS TCA 72 bp | GGGCTGCTGGATGCGCTGTCCTTGGCTGCTTTGATCTaGAGCCATGTGTCACCTAGTGCTTTGGCAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLDALSLAALI*SHVSPSALAKW Trigger: CCACTTTGCCAAAGCACTAGGTGACACATGGCTTCAGATCAAAGCAGCCAAGGACAGCGCATCCAGCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS TCA 72 bp | ACTCCGGGCTGCTGGATGCGCTGTCCTTGGCTGCTTTaGTCTGAAGCCATGTGTCACCTAGTGCTTTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TPGCWMRCPWLL*SEAMCHLVLWQ Trigger: TTGCCAAAGCACTAGGTGACACATGGCTTCAGATCAAAGCAGCCAAGGACAGCGCATCCAGCAGCCCGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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| CDS GCA 72 bp | TTCTCCCCTGAGGGAAGCTTCACGTTTTTCATCATCTaGATGCACCAGAGAGGCTGCCCTGGACAACACATC | + |
|
Preference number: 6 (lower is better) Translates to: FSPEGSFTFFII*MHQRGCPGQHI Trigger: GATGTGTTGTCCAGGGCAGCCTCTCTGGTGCATGCAGATGATGAAAAACGTGAAGCTTCCCTCAGGGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CAA 72 bp | GTCTTATTCAAATGGGGGCTGAAGATGCGGCTCATCTaGGAGACGTGGTCGTTTTCACAGTCCAAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLFKWGLKMRLI*ETWSFSQSKSL Trigger: CAAGGACTTGGACTGTGAAAACGACCACGTCTCCAAGATGAGCCGCATCTTCAGCCCCCATTTGAATAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032459.14 ENSMUST00000139640.2 ENSMUST00000147639.8 |
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| CDS CAA 72 bp | CAGAACGCCGATATTGTTGTTCATCTTGTCCAAGTATaGGTAGTTCAACAGGTCCATCTTCATAAACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QNADIVVHLVQV*VVQQVHLHKQH Trigger: ATGCTGTTTATGAAGATGGACCTGTTGAACTACCAATACTTGGACAAGATGAACAACAATATCGGCGTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032459.14 |
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