Pregenerated sensors for VGLL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091243Ensembl transcript IDs: ENSMUST00000168064.3, ENSMUST00000227997.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCTGTCCTCTCCAGCTGGGAAGGTGACGCATCACAGGGACCTTaGCTGCCATCAATACCGCTTTGTAACTGCAACGACGGAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: SAVLSSWEGDASQGP*LPSIPLCNCNDGEN Trigger: GTTCTCTCCGTCGTTGCAGTTACAAAGCGGTATTGATGGCAGTCAAGGTCCCTGTGATGCGTCACCTTCCCAGCTGGAGAGGACAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR GCA 90 bp | CTGTCCTCTCCAGCTGGGAAGGTGACGCATCACAGGGACCTTGACTaGCATCAATACCGCTTTGTAACTGCAACGACGGAGAGAACTCTT | + |
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Preference number: 1 (lower is better) Translates to: LSSPAGKVTHHRDLD*HQYRFVTATTERTL Trigger: AAGAGTTCTCTCCGTCGTTGCAGTTACAAAGCGGTATTGATGGCAGTCAAGGTCCCTGTGATGCGTCACCTTCCCAGCTGGAGAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CCA 90 bp | GTGTCCCATTTCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTaGGCTCTTGGATTCATGCTGCCATATGATCTGCTGATACCATGC | + |
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Preference number: 1 (lower is better) Translates to: VSHFWMGYPNGIFSQ*ALGFMLPYDLLIPC Trigger: GCATGGTATCAGCAGATCATATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CCA 90 bp | CCTTCTATGTTCTCTTCTCACTCCACATTTCCTGTGTCCCATTTCTaGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: PSMFSSHSTFPVSHF*MGYPNGIFSQWALG Trigger: TCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTGAGAAGAGAACATAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CCA 90 bp | GAGCCCTCTATGTTTTCTCCAGAAAAGGTTCAAATCGAAAGACAATaGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTGTGTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: EPSMFSPEKVQIERQ*PSMFSSHSTFPVSH Trigger: ATGGGACACAGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAACCTTTTCTGGAGAAAACATAGAGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR TCA 90 bp | AGAAGAACATTCTTAGGCCAGTGCCACAGAAACAGAATGTATATCTaGCAAATGCAAAGGTCAGGGCTTGGTGACACTGCTCTCATAATT | + |
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Preference number: 1 (lower is better) Translates to: RRTFLGQCHRNRMYI*QMQRSGLGDTALII Trigger: AATTATGAGAGCAGTGTCACCAAGCCCTGACCTTTGCATTTGTCAGATATACATTCTGTTTCTGTGGCACTGGCCTAAGAATGTTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR GCA 90 bp | TCTGTGGTTTCTTACTGTAGAGAGTTCACTGGTGAAATAGTAGATTaGATATGGAATAATAAGGTTTTCTGGTGTCAAGTGTACAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SVVSYCREFTGEIVD*IWNNKVFWCQVYRL Trigger: AAGCCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTCACCAGTGAACTCTCTACAGTAAGAAACCACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CCA 90 bp | GTTTCTTACTGTAGAGAGTTCACTGGTGAAATAGTAGATTGCATATaGAATAATAAGGTTTTCTGGTGTCAAGTGTACAGGCTTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: VSYCREFTGEIVDCI*NNKVFWCQVYRLSN Trigger: ATTTGAAAGCCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTCACCAGTGAACTCTCTACAGTAAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CAA 90 bp | GGGTTTGTCTACGGCAGTGCCACTGTTGGAGGAAGGATGAAACCCTaGAGGTACCCTCGGAAGCACAGACACAGCGCATCACAGACTCTA | + |
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Preference number: 2 (lower is better) Translates to: GFVYGSATVGGRMKP*RYPRKHRHSASQTL Trigger: TAGAGTCTGTGATGCGCTGTGTCTGTGCTTCCGAGGGTACCTCAAGGGTTTCATCCTTCCTCCAACAGTGGCACTGCCGTAGACAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR TCA 90 bp | ACGCTATTGAAGCTGAGGTTCCCTTGCTGGCTCCATTCATCCCCCAAACGCCAAGGTCTATTTAGGTGCTaGATAATGAATGGGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: TLLKLRFPCWLHSSPKRQGLFRC*IMNGQH Trigger: ATGTTGCCCATTCATTATTCAGCACCTAAATAGACC...TTGGCGTTTGGGGGATGAATGGAGCCAGCAAGGGAACCTCAGCTTCAATAGCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CCA 90 bp | TTTACAAAGATGAGGAACAGTCAGCATTTTGACACGTGTCTCCTTCCTTTCCTGCGGCAGTGCCACTGTTaGAGGAAGGATGAAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: FTKMRNSQHFDTCLLPFLRQCHC*RKDETL Trigger: AAGGGTTTCATCCTTCCTCCAACAGTGGCACTGCCG...CAGGAAAGGAAGGAGACACGTGTCAAAATGCTGACTGTTCCTCATCTTTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CAA 90 bp | CACAGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTaGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: HSASQTLKMDQRFSI*ASAFLRASSLNRTQ Trigger: TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CAA 90 bp | GTTCTGAAACAATCAACTACAGCTGAGTCAGAATTCAGCGAGCAATaGAGGTCACAACTAACTCACCCTGCTGACCCACTCTTTCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: VLKQSTTAESEFSEQ*RSQLTHPADPLFLS Trigger: ACTAAGAAAGAGTGGGTCAGCAGGGTGAGTTAGTTGTGACCTCAATTGCTCGCTGAATTCTGACTCAGCTGTAGTTGATTGTTTCAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTGGCATCTTTTCCCAGTaGGCTCTTGGATTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: VQIERQWPSMFSSHSTFPGIFSQ*ALGFML Trigger: CAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCC...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTGATGGGATATCCCAATaGCATCTTTTCCCAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VQIERQWPSMFSSHSTFPDGISQ*HLFPVG Trigger: GCCCACTGGGAAAAGATGCCATTGGGATATCCCATC...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAAGGCATCTTTTCCCAGTaGGCTCTTGGATTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: FSILASAFLRASSLNRTQGIFSQ*ALGFML Trigger: CAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCC...TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATTACTTCTGCTTGTTACAATAGTGTCAAAACACTGAGGGATGCTGGACAAGAACAGTCAGCATTTTaGCACGTGTCTCCTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LITSACYNSVKTLRDAGQEQSAF*HVSPSF Trigger: AAAGGAAGGAGACACGTGTCAAAATGCTGACTGTTC...TTGTCCAGCATCCCTCAGTGTTTTGACACTATTGTAACAAGCAGAAGTAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTACTACCTGTCCCATGTTCTGCAATCTTACTATTGATAGAATAAAAGATGATGGGATATCCCAATaGCATCTTTTCCCAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: KATTCPMFCNLTIDRIKDDGISQ*HLFPVG Trigger: GCCCACTGGGAAAAGATGCCATTGGGATATCCCATC...ATCTTTTATTCTATCAATAGTAAGATTGCAGAACATGGGACAGGTAGTAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CAA 90 bp | AAAAATATGCAGCAAACAAGCTTAGTCCTTGGTGTTTCTTGTACGTaGAAATCACAGGCTGACTTCATTTTGGGTCTCATACTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KNMQQTSLVLGVSCT*KSQADFILGLILLL Trigger: CAGAAGCAGTATGAGACCCAAAATGAAGTCAGCCTGTGATTTCAACGTACAAGAAACACCAAGGACTAAGCTTGTTTGCTGCATATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR TCA 90 bp | CTTATTACTTCTGCTTGTTACAATAGTGTCAAAACACTGAGGGATGCTGGACAACTGTTTTGTGTGGCCTaGGAAGAATGGAAGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: LITSACYNSVKTLRDAGQLFCVA*EEWKNL Trigger: CAAATTCTTCCATTCTTCTCAGGCCACACAAAACAG...TTGTCCAGCATCCCTCAGTGTTTTGACACTATTGTAACAAGCAGAAGTAATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAAAGTAAAACAAGACGTTaGACAGATGACAAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FSILASAFLRASSLNRTQSKTRR*TDDKGS Trigger: TGAGCCTTTGTCATCTGTGCAACGTCTTGTTTTACT...TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGTAGATTGCATATGGAATAATAAGGTTTTCTGGTGTCAAGTGTACAGGTGTCCCATTTCTGGATaGGATATCCCAATGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: EIVDCIWNNKVFWCQVYRCPISG*DIPMAS Trigger: AGATGCCATTGGGATATCCCATCCAGAAATGGGACA...CCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTTTGGGAAATGTGTTCCTCAGTATTTTTGCAATCCACTCATTCTCCTTTTAGTAAAACAAGACGTTaGACAGATGACAAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QLWEMCSSVFLQSTHSPFSKTRR*TDDKGS Trigger: TGAGCCTTTGTCATCTGTGCAACGTCTTGTTTTACT...AAAAGGAGAATGAGTGGATTGCAAAAATACTGAGGAACACATTTCCCAAAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAACATTCTTAGGCCAGTGCCACAGAAACAGAATGTATATCTGACAAATGCAATAGCCAACATTCTGTaGTTTCTTACTGTAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KNILRPVPQKQNVYLTNAIANIL*FLTVES Trigger: ACTCTCTACAGTAAGAAACCACAGAATGTTGGCTAT...TGCATTTGTCAGATATACATTCTGTTTCTGTGGCACTGGCCTAAGAATGTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR GCA 72 bp | CCAGCTGGGAAGGTGACGCATCACAGGGACCTTGACTaGCATCAATACCGCTTTGTAACTGCAACGACGGAG | + |
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Preference number: 3 (lower is better) Translates to: PAGKVTHHRDLD*HQYRFVTATTE Trigger: CTCCGTCGTTGCAGTTACAAAGCGGTATTGATGGCAGTCAAGGTCCCTGTGATGCGTCACCTTCCCAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CCA 72 bp | CAATGTTGCAGGGTTTGTCTACGGCAGTGCCACTGTTaGAGGAAGGATGAAACCCTTGAGGTACCCTCGGAA | + |
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Preference number: 3 (lower is better) Translates to: QCCRVCLRQCHC*RKDETLEVPSE Trigger: TTCCGAGGGTACCTCAAGGGTTTCATCCTTCCTCCAACAGTGGCACTGCCGTAGACAAACCCTGCAACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CAA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTTTTCCCAGTGGGCTCTaGGATTCATGCTGCCATATG | + |
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Preference number: 3 (lower is better) Translates to: SASQTLKMDQRFSILASAFPSGL*DSCCHM Trigger: CATATGGCAGCATGAATCCAAGAGCCCACTGGGAAA...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR GCA 72 bp | ATTAACATTCTGACGCTATTGAAGCTGAGGTTCCCTTaGTGGCTCCATTCATCCCCCAAACGCCAAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: INILTLLKLRFP*WLHSSPKRQSH Trigger: GTGGCTTTGGCGTTTGGGGGATGAATGGAGCCAGCAAGGGAACCTCAGCTTCAATAGCGTCAGAATGTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTTCTCTTCTCACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCTTTCCCAGTGGGCTCTaGGATTCATGCTGCCATATG | + |
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Preference number: 3 (lower is better) Translates to: MFSSHSTFPVSHFWMGYPFPSGL*DSCCHM Trigger: CATATGGCAGCATGAATCCAAGAGCCCACTGGGAAA...GGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTGAGAAGAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CCA 72 bp | ATTTCCTGTGTCCCATTTCTGGATGGGATATCCCAATaGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: ISCVPFLDGISQ*HLFPVGSWIHA Trigger: AGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CCA 72 bp | GAATTCAGAGGGGTAGAAGGCAAACACCCTTCAGTGTaGCAGCTGTACTTTAAAGTGAGAAACCCAGATCCA | + |
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Preference number: 3 (lower is better) Translates to: EFRGVEGKHPSV*QLYFKVRNPDP Trigger: TGGATCTGGGTTTCTCACTTTAAAGTACAGCTGCCACACTGAAGGGTGTTTGCCTTCTACCCCTCTGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | GCAAACACCCTTCAGTGTGGCAGCTGTACTTTAAAGTaGGAAACCCAGATCCAGAGTGTAATAGCACTTTAC | + |
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Preference number: 3 (lower is better) Translates to: ANTLQCGSCTLK*ETQIQSVIALY Trigger: GTAAAGTGCTATTACACTCTGGATCTGGGTTTCTCACTTTAAAGTACAGCTGCCACACTGAAGGGTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | AGTCCTTGGTGTTTCTTGTACGTTGAAATCACAGGCTaGCTTCATTTTGGGTCTCATACTGCTTCTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SPWCFLYVEITG*LHFGSHTASAV Trigger: GACAGCAGAAGCAGTATGAGACCCAAAATGAAGTCAGCCTGTGATTTCAACGTACAAGAAACACCAAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | ACGGCAATGCAAGTTAATATATCTCAAGGAAGGATGTaGCAACAGCCAAAGTGTTTCCCTCATGAGAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: TAMQVNISQGRM*QQPKCFPHESC Trigger: GCAACTCTCATGAGGGAAACACTTTGGCTGTTGTCACATCCTTCCTTGAGATATATTAACTTGCATTGCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | GCTGGTAGTTGTCTGAACATCTACGCTGTAGTTGGGTaGATCTGTATACGTTTTCCAACTTTCACAGCAATC | + |
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Preference number: 3 (lower is better) Translates to: AGSCLNIYAVVG*ICIRFPTFTAI Trigger: GATTGCTGTGAAAGTTGGAAAACGTATACAGATTCACCCAACTACAGCGTAGATGTTCAGACAACTACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | AGATTTTGGTCTCCTCCTTTGATGACAATGTGCCACTaGTACCTATGCCTGTTCTTAAAGAGAGAGCATGTT | + |
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Preference number: 3 (lower is better) Translates to: RFWSPPLMTMCH*YLCLFLKREHV Trigger: AACATGCTCTCTCTTTAAGAACAGGCATAGGTATCAGTGGCACATTGTCATCAAAGGAGGAGACCAAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | GTTCTTGTCTTGTCCATCACTTACTGCCATTCCCACTaGCTAATTCAACAAATGCTACTTCATACAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: VLVLSITYCHSH*LIQQMLLHTGM Trigger: CATGCCTGTATGAAGTAGCATTTGTTGAATTAGTCAGTGGGAATGGCAGTAAGTGATGGACAAGACAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | CATCACTTTTACAAAGATGAGGAACAGTCAGCATTTTaGCACGTGTCTCCTTCCTTTCCTGATACTACTCAT | + |
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Preference number: 3 (lower is better) Translates to: HHFYKDEEQSAF*HVSPSFPDTTH Trigger: ATGAGTAGTATCAGGAAAGGAAGGAGACACGTGTCAAAATGCTGACTGTTCCTCATCTTTGTAAAAGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR TCA 72 bp | AGGCCCATTATCTGGATGCTAAAGTTCCTAAACTGGTaGGTGGGAGCTTCCTTAAGTCTAGATTATATTGAT | + |
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Preference number: 3 (lower is better) Translates to: RPIIWMLKFLNW*VGASLSLDYID Trigger: ATCAATATAATCTAGACTTAAGGAAGCTCCCACTCACCAGTTTAGGAACTTTAGCATCCAGATAATGGGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CCA 72 bp | ATGTTTTCTCCAGAAAAGGTTCAAATCGAAAGACAATaGCCTTCTATGTTCTCTTCTCACTCCACATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: MFSPEKVQIERQ*PSMFSSHSTFP Trigger: AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAACCTTTTCTGGAGAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR TCA 72 bp | AAGAAATTAATTGGTGATGTTGTGTCCCTTTCTAAATaGCTGTACGGCCCTGTTTATTTACACAGCACAACA | + |
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Preference number: 3 (lower is better) Translates to: KKLIGDVVSLSK*LYGPVYLHSTT Trigger: TGTTGTGCTGTGTAAATAAACAGGGCCGTACAGTCATTTAGAAAGGGACACAACATCACCAATTAATTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR-3UTR CAA 90 bp | AATTCAAAACACAGCAGGAAGAGAAACGAATGTCTAAGATACAGCCAAGTGAAATTCATTTCTCAAGCTTaGAGTCTTTCAACCAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: NSKHSRKRNECLRYSQVKFISQA*SLSTSL Trigger: CAAACTGGTTGAAAGACTCAAAGCTTGAGAAATGAA...TTTCACTTGGCTGTATCTTAGACATTCGTTTCTCTTCCTGCTGTGTTTTGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR GCA 72 bp | CATAGTGATTTTAAGGCTACTACCTGTCCCATGTTCTaGAATCTTACTATTGATAGAATAAAAGATGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HSDFKATTCPMF*NLTIDRIKDAL Trigger: GAGAGCATCTTTTATTCTATCAATAGTAAGATTGCAGAACATGGGACAGGTAGTAGCCTTAAAATCACTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| 3UTR CCA 72 bp | GAAATAGTAGATTGCATATGGAATAATAAGGTTTTCTaGTGTCAAGTGTACAGGCTTTCAAATCGACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: EIVDCIWNNKVF*CQVYRLSNRLK Trigger: TTTCAGTCGATTTGAAAGCCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS-3UTR CCA 90 bp | ACGCTATTGAAGCTGAGGTTCCCTTGCTGGCTCCATTCATCCCCCAAACGCCAAGGGGAGCAGGAATCCTaGCAGCTCGCACTGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLLKLRFPCWLHSSPKRQGEQES*QLALMA Trigger: TGCCATCAGTGCGAGCTGCCAGGATTCCTGCTCCCC...TTGGCGTTTGGGGGATGAATGGAGCCAGCAAGGGAACCTCAGCTTCAATAGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS-3UTR CCA 90 bp | TCCCATTTCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGAGGGTTGGGCAGATACTaGGGCGCTCCATACGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHFWMGYPNGIFSQWALGGLGRY*GAPYGW Trigger: CCAGCCGTATGGAGCGCCCCAGTATCTGCCCAACCC...TCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS-3UTR CCA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTCAGCTGCCACAGGGTTaGGCAGATACTGGGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASQTLKMDQRFSILASAQLPQG*ADTGAL Trigger: GAGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTG...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| 3UTR CAA 72 bp | TACGGCAGTGCCACTGTTGGAGGAAGGATGAAACCCTaGAGGTACCCTCGGAAGCACAGACACAGCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YGSATVGGRMKP*RYPRKHRHSAS Trigger: TGATGCGCTGTGTCTGTGCTTCCGAGGGTACCTCAAGGGTTTCATCCTTCCTCCAACAGTGGCACTGCCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR GCA 90 bp | ACGCTATTGAAGCTGAGGTTCCCTTGCTGGCTCCATTCATCCCCCAAACGCCAAATGGCAGATTCGGGATaGAAGGTGTTGGCTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLKLRFPCWLHSSPKRQMADSG*KVLAWP Trigger: GGGCCAAGCCAACACCTTGCATCCCGAATCTGCCAT...TTGGCGTTTGGGGGATGAATGGAGCCAGCAAGGGAACCTCAGCTTCAATAGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCAGGGCAGGTTGCAGCTaGCACAGGGTTGGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SGWDIPMASFPSGLLDSCRAGCS*HRVGQI Trigger: TATCTGCCCAACCCTGTGGCAGCTGCAACCTGCCCT...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCAATGGCATCTTTCAGCTGCCACAGGGTTaGGCAGATACTGGGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSTFPVSHFWMGYPNGIFQLPQG*ADTGAL Trigger: GAGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTG...AAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTCCATCTCGGCAGGCTaGTCTTTCTCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGWDIPMASFPSGLLDSCSISAG*SFSSSS Trigger: GGAGGAGGAGGAGAAAGACCAGCCTGCCGAGATGGA...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTCAAACAAGGCGCGGGTaGGGGTTGGTAAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SASQTLKMDQRFSILASAQTRRG*GLVRAG Trigger: ACCAGCTCTTACCAACCCCCACCCGCGCCTTGTTTG...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCCAAACAAGGCGCGGGTaGGGGTTGGTAAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGWDIPMASFPSGLLDSCQTRRG*GLVRAG Trigger: ACCAGCTCTTACCAACCCCCACCCGCGCCTTGTTTG...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATATGATCTGCTGATACCATGCCCATACGGCTGGGGGTaGTACATCACCTCCGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQWALGFMLPYDLLIPCPYGWG*YITSAQ Trigger: TTGTGCGGAGGTGATGTATCACCCCCAGCCGTATGG...GCATGGTATCAGCAGATCATATGGCAGCATGAATCCAAGAGCCCACTGGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | CCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATATGATCTGGTTTGCTGGGAAGCGTaGCTTCCAGAGAGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNGIFSQWALGFMLPYDLVCWEA*LPESPA Trigger: TGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAAC...CAGATCATATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCAAGGACTAGGAGAGCCCTCTATGTTTTCTCCAGAAAAGGTTCAAATCGAGGCTGTAGGGCAGGTTaGAGCTGCCACAGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRTRRALYVFSRKGSNRGCRAG*SCHRVG Trigger: CCCAACCCTGTGGCAGCTGCAACCTGCCCTACAGCC...TCGATTTGAACCTTTTCTGGAGAAAACATAGAGGGCTCTCCTAGTCCTTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATATGATCTGATGGCAGATTCGGGATaGAAGGTGTTGGCTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNGIFSQWALGFMLPYDLMADSG*KVLAWP Trigger: GGGCCAAGCCAACACCTTGCATCCCGAATCTGCCAT...CAGATCATATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCCGGGCTCACCTGAGATaGCAGAGGATAGTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGWDIPMASFPSGLLDSCRAHLR*QRIVPR Trigger: TCTTGGCACTATCCTCTGGCATCTCAGGTGAGCCCG...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | GGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATACGGGCTCACCTGAGATaGCAGAGGATAGTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GISQWHLFPVGSWIHAAIRAHLR*QRIVPR Trigger: TCTTGGCACTATCCTCTGGCATCTCAGGTGAGCCCG...TATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACTGGTACAAGGCAAGTAAAACAAGACGTTGCACAGATGACAAAGGCTCAGGGTTGGGCAGATACTaGGGCGCTCCATACGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYWYKASKTRRCTDDKGSGLGRY*GAPYGW Trigger: CCAGCCGTATGGAGCGCCCCAGTATCTGCCCAACCC...TGAGCCTTTGTCATCTGTGCAACGTCTTGTTTTACTTGCCTTGTACCAGTACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCAATGGCATCTTTACCGCTAACTTCTGCTaGCCAGGTTGGGGAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSTFPVSHFWMGYPNGIFTANFC*PGWGAG Trigger: TCCGGCTCCCCAACCTGGCCAGCAGAAGTTAGCGGT...AAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTTTGGTGATGTCGCACTaGGGAGCAGGAATCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASQTLKMDQRFSILASALVMSH*GAGILA Trigger: TGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAA...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGCTAGCCCAGGTACTGGTACAAGGCAAGTAAAACAAGACGTTGCACAGATGTCCACTGTCCCATaGAAGGCTCCGGCCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKASPGTGTRQVKQDVAQMSTVP*KAPAHA Trigger: AGCATGGGCCGGAGCCTTTCATGGGACAGTGGACAT...CTGTGCAACGTCTTGTTTTACTTGCCTTGTACCAGTACCTGGGCTAGCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGAAAAGAAACCCAAAGGCTCTTCCTCAAGGACTAGGAGAGCCCTCTATCGGGATGCAAGGTGTTaGCTTGGCCCAAAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MREKKPKGSSSRTRRALYRDARC*LGPKLL Trigger: CAAGAGCTTTGGGCCAAGCCAACACCTTGCATCCCG...ATAGAGGGCTCTCCTAGTCCTTGAGGAAGAGCCTTTGGGTTTCTTTTCCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | TCCCATTTCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGAGTAGTAAAGGTGCCGTaGGGTGCAGTGACTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHFWMGYPNGIFSQWALGVVKVP*GAVTWK Trigger: CTTCCAAGTCACTGCACCCCACGGCACCTTTACTAC...TCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTCTCTTCTCACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCTGCCGTGGGGTGCAGTaGCTTGGAAGTCAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MFSSHSTFPVSHFWMGYPCRGVQ*LGSQDE Trigger: TTCATCCTGACTTCCAAGTCACTGCACCCCACGGCA...GGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTGAGAAGAGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | CACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCAATGGCATCTTTTCAGATCTGTCTTGGTaGTGTCGCACTGGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSTFPVSHFWMGYPNGIFSDLSW*CRTGEQ Trigger: CTGCTCCCCAGTGCGACATCACCAAGACAGATCTGA...AAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTAGACCCAATGTCTCCCTaGTGGCCAGGTTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LASAFLRASSLNRTQRLLDPMSP*WPGWGA Trigger: GGCTCCCCAACCTGGCCAGCAGGGAGACATTGGGTC...TAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTTGCAAGGTGTTGGCTTaGCCCAAAGCTCTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SASQTLKMDQRFSILASACKVLA*PKALEK Trigger: CTTCTCAAGAGCTTTGGGCCAAGCCAACACCTTGCA...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCATCACAGACTCTAAAGATGGATCAGCGCTTCAGCATTTTGGCCAGTGCTGGAAAATTACTCCGCTaGCTCGAAAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SASQTLKMDQRFSILASAGKLLR*LERAEL Trigger: CAGCTCAGCTCTTTCGAGCCAGCGGAGTAATTTTCC...AGCACTGGCCAAAATGCTGAAGCGCTGATCCATCTTTAGAGTCTGTGATGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS-3UTR CCA 90 bp | TTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACCAATGTCTCCCTGCTaGCCAGGTTGGGGAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LASAFLRASSLNRTQRLLPMSPC*PGWGAG Trigger: TCCGGCTCCCCAACCTGGCCAGCAGGGAGACATTGG...TAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGTCCCATTTCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTGAGAGTCCTGCATCTTaGTGTATACCGCTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSHFWMGYPNGIFSQWAESPAS*CIPLTS Trigger: AGAAGTTAGCGGTATACAGCAAGATGCAGGACTCTC...AGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGAAATGGGACACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | AGGTACTGGTACAAGGCAAGTAAAACAAGACGTTGCACAGATGACAAAGGCTCACGGGATGCAAGGTGTTaGCTTGGCCCAAAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYWYKASKTRRCTDDKGSRDARC*LGPKLL Trigger: CAAGAGCTTTGGGCCAAGCCAACACCTTGCATCCCG...TGAGCCTTTGTCATCTGTGCAACGTCTTGTTTTACTTGCCTTGTACCAGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS-3UTR CCA 90 bp | TGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATGGGGTTGGTAAGAGCTaGTCCAAAAGGAAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WDIPMASFPSGLLDSCCHGVGKS*SKRKLE Trigger: TTCCAACTTCCTTTTGGACCAGCTCTTACCAACCCC...ATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| 3UTR CAA 72 bp | CAATCAACTACAGCTGAGTCAGAATTCAGCGAGCAATaGAGGTCACAACTAACTCACCCTGCTGACCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QSTTAESEFSEQ*RSQLTHPADPL Trigger: GAGTGGGTCAGCAGGGTGAGTTAGTTGTGACCTCAATTGCTCGCTGAATTCTGACTCAGCTGTAGTTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS-3UTR TCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTATGTCCACTGTCCCATaGAAGGCTCCGGCCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPMSTVP*KAPAHA Trigger: AGCATGGGCCGGAGCCTTTCATGGGACAGTGGACAT...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTAGGGCAGGTTGCAGCTaGCACAGGGTTGGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPRAGCS*HRVGQI Trigger: TATCTGCCCAACCCTGTGGCAGCTGCAACCTGCCCT...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTTGGGAAATGTGTTCCTCAGTATTTTTGCAATCCACTCATTCTCCTTTTGGCTGTAGGGCAGGTTaGAGCTGCCACAGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWEMCSSVFLQSTHSPFGCRAG*SCHRVG Trigger: CCCAACCCTGTGGCAGCTGCAACCTGCCCTACAGCC...AAAAGGAGAATGAGTGGATTGCAAAAATACTGAGGAACACATTTCCCAAAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | TGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATGGTCCAAAAGGAAGTTaGAAAATTACTCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDIPMASFPSGLLDSCCHGPKGS*KITPLA Trigger: AGCCAGCGGAGTAATTTTCCAACTTCCTTTTGGACC...ATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACAGGGGAGCAGGAATCCTaGCAGCTCGCACTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QCFSESKFFKQNSTTVTTGEQES*QLALMA Trigger: TGCCATCAGTGCGAGCTGCCAGGATTCCTGCTCCCC...TGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACCATACGGCTGGGGGTaGTACATCACCTCCGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSILASAFLRASSLNRTQPYGWG*YITSAQ Trigger: TTGTGCGGAGGTGATGTATCACCCCCAGCCGTATGG...TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTTGCCGTGGGGTGCAGTaGCTTGGAAGTCAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPCRGVQ*LGSQDE Trigger: TTCATCCTGACTTCCAAGTCACTGCACCCCACGGCA...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTTCAGATCTGTCTTGGTaGTGTCGCACTGGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPSDLSW*CRTGEQ Trigger: CTGCTCCCCAGTGCGACATCACCAAGACAGATCTGA...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTTTGGTGATGTCGCACTaGGGAGCAGGAATCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPLVMSH*GAGILA Trigger: TGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAA...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTGTGTTCATCCACTACTaGCCCAATGTCTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPVFIHY*PNVSLL Trigger: CAGCAGGGAGACATTGGGTCAGTAGTGGATGAACAC...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | CTTATTACTTCTGCTTGTTACAATAGTGTCAAAACACTGAGGGATGCTGGACAAAAAGGTGCCGTGGGGTaGAGTGACTTGGAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LITSACYNSVKTLRDAGQKGAVG*SDLEVR Trigger: CCTGACTTCCAAGTCACTGCACCCCACGGCACCTTT...TTGTCCAGCATCCCTCAGTGTTTTGACACTATTGTAACAAGCAGAAGTAATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACAAAAGGTGCCGTGGGGTaGAGTGACTTGGAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCFSESKFFKQNSTTVTTKGAVG*SDLEVR Trigger: CCTGACTTCCAAGTCACTGCACCCCACGGCACCTTT...TGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAGTAGTAAAGGTGCCGTaGGGTGCAGTGACTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQHFGQCFSESKFFKQNSVVKVP*GAVTWK Trigger: CTTCCAAGTCACTGCACCCCACGGCACCTTTACTAC...TGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| 3UTR CAA 72 bp | GCTGACCCACTCTTTCTTAGTCAAAACAGTGTGTTCTaGTCTTGTCCATCACTTACTGCCATTCCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ADPLFLSQNSVF*SCPSLTAIPTD Trigger: GTCAGTGGGAATGGCAGTAAGTGATGGACAAGACAAGAACACACTGTTTTGACTAAGAAAGAGTGGGTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| 3UTR CAA 72 bp | GTTTCTTGTACGTTGAAATCACAGGCTGACTTCATTTaGGGTCTCATACTGCTTCTGCTGTCCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCTLKSQADFI*GLILLLLSSPA Trigger: AGCTGGAGAGGACAGCAGAAGCAGTATGAGACCCAAAATGAAGTCAGCCTGTGATTTCAACGTACAAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTGGAAAATTACTCCGCTaGCTCGAAAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQIERQWPSMFSSHSTFPGKLLR*LERAEL Trigger: CAGCTCAGCTCTTTCGAGCCAGCGGAGTAATTTTCC...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACATTATATACCGCTAACTTCTaGTGGCCAGGTTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSESKFFKQNSTTVTTLYTANF*WPGWGA Trigger: GGCTCCCCAACCTGGCCAGCAGAAGTTAGCGGTATA...TAATGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACATGCAAGGTGTTGGCTTaGCCCAAAGCTCTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QCFSESKFFKQNSTTVTTCKVLA*PKALEK Trigger: CTTCTCAAGAGCTTTGGGCCAAGCCAACACCTTGCA...TGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACATTCTTAGGCCAGTGCCACAGAAACAGAATGTATATCTGACAAATGCAACTTCCAGAGAGTCCTaGATCTTGCTGTATACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNILRPVPQKQNVYLTNATSRES*ILLYTA Trigger: AGCGGTATACAGCAAGATGCAGGACTCTCTGGAAGT...TGCATTTGTCAGATATACATTCTGTTTCTGTGGCACTGGCCTAAGAATGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | TTTACAAAGATGAGGAACAGTCAGCATTTTGACACGTGTCTCCTTCCTTTCCTGTCTTGCTTTTTGAAATaGCAGATTCGGGATGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTKMRNSQHFDTCLLPFLSCFLK*QIRDAR Trigger: CCTTGCATCCCGAATCTGCCATTTCAAAAAGCAAGA...CAGGAAAGGAAGGAGACACGTGTCAAAATGCTGACTGTTCCTCATCTTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| 3UTR CAA 72 bp | CAGCAAACAAGCTTAGTCCTTGGTGTTTCTTGTACGTaGAAATCACAGGCTGACTTCATTTTGGGTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QQTSLVLGVSCT*KSQADFILGLI Trigger: TATGAGACCCAAAATGAAGTCAGCCTGTGATTTCAACGTACAAGAAACACCAAGGACTAAGCTTGTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR TCA 90 bp | GAAATAGTAGATTGCATATGGAATAATAAGGTTTTCTGGTGTCAAGTGTACAGGGTGTTCATCCACTACTaGCCCAATGTCTCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EIVDCIWNNKVFWCQVYRVFIHY*PNVSLE Trigger: TTCCAGGGAGACATTGGGTCAGTAGTGGATGAACAC...CCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR TCA 90 bp | CAACTTTGGGAAATGTGTTCCTCAGTATTTTTGCAATCCACTCATTCTCCTTTTCCCCATCTTGCTTTTTaGAATGGCAGATTCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLWEMCSSVFLQSTHSPFPHLAF*NGRFGM Trigger: CATCCCGAATCTGCCATTTCAAAAAGCAAGATGGGG...AAAAGGAGAATGAGTGGATTGCAAAAATACTGAGGAACACATTTCCCAAAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACATCTTGCTTTTTGAAATaGCAGATTCGGGATGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCFSESKFFKQNSTTVTTSCFLK*QIRDAR Trigger: CCTTGCATCCCGAATCTGCCATTTCAAAAAGCAAGA...TGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CCA 90 bp | GAAATAGTAGATTGCATATGGAATAATAAGGTTTTCTGGTGTCAAGTGTACAGGGGTCCAAAAGGAAGTTaGAAAATTACTCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIVDCIWNNKVFWCQVYRGPKGS*KITPLA Trigger: AGCCAGCGGAGTAATTTTCCAACTTCCTTTTGGACC...CCTGTACACTTGACACCAGAAAACCTTATTATTCCATATGCAATCTACTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| 3UTR CAA 72 bp | CCTATGCCTGTTCTTAAAGAGAGAGCATGTTGCATGTaGCATGCAATAGAATTCAGATTCTTCACTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PMPVLKERACCM*HAIEFRFFTFL Trigger: AAGGAAAGTGAAGAATCTGAATTCTATTGCATGCAACATGCAACATGCTCTCTCTTTAAGAACAGGCATAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| 3UTR CAA 72 bp | ATGCCACAACTTTGGGAAATGTGTTCCTCAGTATTTTaGCAATCCACTCATTCTCCTTTTATAAATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPQLWEMCSSVF*QSTHSPFINLR Trigger: CCTCAAATTTATAAAAGGAGAATGAGTGGATTGCAAAAATACTGAGGAACACATTTCCCAAAGTTGTGGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| 3UTR CAA 72 bp | CTTCCTTCAAAGTGTTTCTGTGTGATCAGCTACACTTaGAGACACAAATATCAGCCTAATTTTTCTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPSKCFCVISYT*RHKYQPNFSEI Trigger: TATTTCAGAAAAATTAGGCTGATATTTGTGTCTCAAAGTGTAGCTGATCACACAGAAACACTTTGAAGGAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS GCA 90 bp | AGGTTGGGGAGCCGGATGATAGCAGGCTGTAGGGCAGGTTGCAGCTaGCACAGGGTTGGGCAGATACTGGGGCGCTCCATACGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGSRMIAGCRAGCS*HRVGQILGRSIRLG Trigger: CCCCAGCCGTATGGAGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTGCAACCTGCCCTACAGCCTGCTATCATCCGGCTCCCCAACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS GCA 90 bp | CTGGCCAGGTTGGGGAGCCGGATGATAGCAGGCTGTAGGGCAGGTTaGAGCTGCCACAGGGTTGGGCAGATACTGGGGCGCTCCATACGG | + |
|
Preference number: 5 (lower is better) Translates to: LARLGSRMIAGCRAG*SCHRVGQILGRSIR Trigger: CCGTATGGAGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTGCAACCTGCCCTACAGCCTGCTATCATCCGGCTCCCCAACCTGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS GCA 90 bp | GGGGCCAGTCTGATGCAGGCCATGTCCTGGCCAAGAGTTGGGATCTaGTGTAGTAAAGGTGCCGTGGGGTGCAGTGACTTGGAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GASLMQAMSWPRVGI*CSKGAVGCSDLEVR Trigger: CCTGACTTCCAAGTCACTGCACCCCACGGCACCTTTACTACAGCAGATCCCAACTCTTGGCCAGGACATGGCCTGCATCAGACTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS CCA 90 bp | GTGAAAAGGACACAGCGAGAGTTAAGGTACTCCATCTCGGCAGGCTaGTCTTTCTCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKRTQRELRYSISAG*SFSSSSSSSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGAAAGACCAGCCTGCCGAGATGGAGTACCTTAACTCTCGCTGTGTCCTTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS CCA 90 bp | GTAGCCGTGGTGACTGTAGTCAGATCTGTCTTGGTGATGTCGCACTaGGGAGCAGGAATCCTGGCAGCTCGCACTGATGGCATTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTVVRSVLVMSH*GAGILAARTDGISR Trigger: CCTGCTAATGCCATCAGTGCGAGCTGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAAGACAGATCTGACTACAGTCACCACGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | ACGCTATTGAAGCTGAGGTTCCCTTGCTGGCTCCATTCATCCCCCAAACGCCAAAGGCGCGGGTGGGGGTaGGTAAGAGCTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLLKLRFPCWLHSSPKRQRRGWG*VRAGPK Trigger: TTTTGGACCAGCTCTTACCAACCCCCACCCGCGCCT...TTGGCGTTTGGGGGATGAATGGAGCCAGCAAGGGAACCTCAGCTTCAATAGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CAA 90 bp | GGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATAAGGCAGAGCCAGCAGTaGGGTGGTGGTGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GISQWHLFPVGSWIHAAIRQSQQ*GGGGGG Trigger: ACCACCACCACCACCACCCAACTGCTGGCTCTGCCT...TATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS GCA 90 bp | TCCTCCTCCTCTTGTTTGCTGGGAAGCGTGACTTCCAGAGAGTCCTaGATCTTGCTGTATACCGCTAACTTCTGCTGGCCAGGTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSCLLGSVTSRES*ILLYTANFCWPGWG Trigger: TCCCCAACCTGGCCAGCAGAAGTTAGCGGTATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS TCA 90 bp | CATCCTCCTCCTCCTCCTCCTCCTCCTCTTGTTTGCTGGGAAGCGTaGCTTCCAGAGAGTCCTGCATCTTGCTGTATACCGCTAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPPPPPPPLVCWEA*LPESPASCCIPLTS Trigger: AGAAGTTAGCGGTATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGGAGGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CAA 90 bp | ATGTTCTCTTCTCACTCCACATTTCCTGTGTCCCATTTCTGGATGGGATATCCCAGGCAGAGCCAGCAGTaGGGTGGTGGTGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MFSSHSTFPVSHFWMGYPRQSQQ*GGGGGG Trigger: ACCACCACCACCACCACCCAACTGCTGGCTCTGCCT...GGGATATCCCATCCAGAAATGGGACACAGGAAATGTGGAGTGAGAAGAGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGCTAGCCCAGGTACTGGTACAAGGCAAGTAAAACAAGACGTTGCACAGTCCCTGCTGGCCAGGTaGGGGAGCCGGATGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TKASPGTGTRQVKQDVAQSLLAR*GSRMIA Trigger: TGCTATCATCCGGCTCCCCAACCTGGCCAGCAGGGA...CTGTGCAACGTCTTGTTTTACTTGCCTTGTACCAGTACCTGGGCTAGCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGAAAAACAAGAGGGGCAGAGAAGAACATTCTTAGGCCAGTGCCACAGATCGGGATGCAAGGTGTaGGCTTGGCCCAAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKEKQEGQRRTFLGQCHRSGCKV*AWPKAL Trigger: AAGAGCTTTGGGCCAAGCCAACACCTTGCATCCCGA...TCTGTGGCACTGGCCTAAGAATGTTCTTCTCTGCCCCTCTTGTTTTTCCTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CAA 90 bp | GGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGCCATATCGGGATGCAAGGTGTaGGCTTGGCCCAAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GISQWHLFPVGSWIHAAISGCKV*AWPKAL Trigger: AAGAGCTTTGGGCCAAGCCAACACCTTGCATCCCGA...TATGGCAGCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAAGCAGCTGCCACAGGGTaGGGCAGATACTGGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSILASAFLRASSLNRTQAAATG*GRYWGA Trigger: AGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTGC...TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCGCCCCATCTTGCTTTTaGAAATGGCAGATTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGWDIPMASFPSGLLDSCAPSCF*KWQIRD Trigger: ATCCCGAATCTGCCATTTCAAAAAGCAAGATGGGGC...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGATGGGATATCCCAATGGCATCTTTTCCCAGTGGGCTCTTGGATTCATGCTGGTCCAAAAGGAAGTaGGAAAATTACTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGWDIPMASFPSGLLDSCWSKRK*ENYSAG Trigger: GCCAGCGGAGTAATTTTCCAACTTCCTTTTGGACCA...GCATGAATCCAAGAGCCCACTGGGAAAAGATGCCATTGGGATATCCCATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAAGGCGCGGGTGGGGGTaGGTAAGAGCTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQHFGQCFSESKFFKQNSRRGWG*VRAGPK Trigger: TTTTGGACCAGCTCTTACCAACCCCCACCCGCGCCT...TGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACATTAGCAGCTGCCACAGGGTaGGGCAGATACTGGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFSESKFFKQNSTTVTTLAAATG*GRYWGA Trigger: AGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTGC...TAATGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCACTCCTCCTCCTCCTCTaGTTTGCTGGGAAGCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQHFGQCFSESKFFKQNSLLLLL*FAGKRD Trigger: GTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAG...TGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGAAAAGAAACCCAAAGGCTCTTCCTCAAGGACTAGGAGAGCCCTCTATTGGTCCAAAAGGAAGTaGGAAAATTACTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MREKKPKGSSSRTRRALYWSKRK*ENYSAG Trigger: GCCAGCGGAGTAATTTTCCAACTTCCTTTTGGACCA...ATAGAGGGCTCTCCTAGTCCTTGAGGAAGAGCCTTTGGGTTTCTTTTCCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACATTACTTCTGCTGGCCAGGTaGGGGAGCCGGATGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFSESKFFKQNSTTVTTLLLLAR*GSRMIA Trigger: TGCTATCATCCGGCTCCCCAACCTGGCCAGCAGAAG...TAATGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS-3UTR CAA 90 bp | AGGTACTGGTACAAGGCAAGTAAAACAAGACGTTGCACAGATGACAAAGGCTCAGCCCCATCTTGCTTTTaGAAATGGCAGATTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RYWYKASKTRRCTDDKGSAPSCF*KWQIRD Trigger: ATCCCGAATCTGCCATTTCAAAAAGCAAGATGGGGC...TGAGCCTTTGTCATCTGTGCAACGTCTTGTTTTACTTGCCTTGTACCAGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAACGACTGTTACAACAGTGGGGTGCAGTGACTaGGAAGTCAGGATGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QCFSESKFFKQNSTTVTTVGCSD*EVRMNS Trigger: GGAGTTCATCCTGACTTCCAAGTCACTGCACCCCAC...TGTTGTAACAGTCGTTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGCATTTTGGCCAGTGCTTTTCTGAGAGCAAGTTCTTTAAACAGAACTCAAGTGGGGTGCAGTGACTaGGAAGTCAGGATGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSILASAFLRASSLNRTQVGCSD*EVRMNS Trigger: GGAGTTCATCCTGACTTCCAAGTCACTGCACCCCAC...TTGAGTTCTGTTTAAAGAACTTGCTCTCAGAAAAGCACTGGCCAAAATGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAAATCGAAAGACAATGGCCTTCTATGTTCTCTTCTCACTCCACATTTCCTAGAGAGTCCTGCATCTaGCTGTATACCGCTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQIERQWPSMFSSHSTFPRESCI*LYTANF Trigger: GAAGTTAGCGGTATACAGCAAGATGCAGGACTCTCT...AGGAAATGTGGAGTGAGAAGAGAACATAGAAGGCCATTGTCTTTCGATTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS CCA 72 bp | GTGGCCATAGGCGGGATCCAAGGCAGAGCCAGCAGTTaGGTGGTGGTGGTGGTGGTGGCGATGGTGCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: VAIGGIQGRASS*VVVVVVAMVHV Trigger: CACGTGCACCATCGCCACCACCACCACCACCACCCAACTGCTGGCTCTGCCTTGGATCCCGCCTATGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS CAA 72 bp | GGTGGCCATAGGCGGGATCCAAGGCAGAGCCAGCAGTaGGGTGGTGGTGGTGGTGGTGGCGATGGTGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GGHRRDPRQSQQ*GGGGGGGDGAR Trigger: ACGTGCACCATCGCCACCACCACCACCACCACCCAACTGCTGGCTCTGCCTTGGATCCCGCCTATGGCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS CCA 72 bp | GGGTGGGGCGGGGCCAGTCTGATGCAGGCCATGTCCTaGCCAAGAGTTGGGATCTGCTGTAGTAAAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWGGASLMQAMS*PRVGICCSKGA Trigger: GGCACCTTTACTACAGCAGATCCCAACTCTTGGCCAGGACATGGCCTGCATCAGACTGGCCCCGCCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS GCA 72 bp | AGCCGGATGATAGCAGGCTGTAGGGCAGGTTGCAGCTaGCACAGGGTTGGGCAGATACTGGGGCGCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SRMIAGCRAGCS*HRVGQILGRSI Trigger: TATGGAGCGCCCCAGTATCTGCCCAACCCTGTGGCAGCTGCAACCTGCCCTACAGCCTGCTATCATCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS CAA 90 bp | CCGGCCCATGCTGAGGTAGCCGTGGTGACTGTAGTCAGATCTGTCTaGGTGATGTCGCACTGGGGAGCAGGAATCCTGGCAGCTCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PAHAEVAVVTVVRSV*VMSHWGAGILAART Trigger: AGTGCGAGCTGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAAGACAGATCTGACTACAGTCACCACGGCTACCTCAGCATGGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
||
| CDS CAA 72 bp | CTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCTaGTTTGCTGGGAAGCGTGACTTCCAGAGAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLILLLLLLLL*FAGKRDFQRVL Trigger: CAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
||
| CDS CCA 72 bp | ACACAGCGAGAGTTAAGGTACTCCATCTCGGCAGGCTaGTCTTTCTCCTCCTCCTCCTCATCCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TQRELRYSISAG*SFSSSSSSSSS Trigger: GGAGGAGGAGGATGAGGAGGAGGAGGAGAAAGACCAGCCTGCCGAGATGGAGTACCTTAACTCTCGCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS CCA 72 bp | GTGACTGTAGTCAGATCTGTCTTGGTGATGTCGCACTaGGGAGCAGGAATCCTGGCAGCTCGCACTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: VTVVRSVLVMSH*GAGILAARTDG Trigger: GCCATCAGTGCGAGCTGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAAGACAGATCTGACTACAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS CCA 72 bp | GTCCTGATGCTGAAGACCTGTATCGAAGCCCACACTTaGCACGATGTCCACTGTCCCATGAAAGGCTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: VLMLKTCIEAHT*HDVHCPMKGSG Trigger: GCCGGAGCCTTTCATGGGACAGTGGACATCGTGCCAAGTGTGGGCTTCGATACAGGTCTTCAGCATCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS CAA 72 bp | TCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCTTGTTaGCTGGGAAGCGTGACTTCCAGAGAGTCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSSSC*LGSVTSRESCI Trigger: GATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS CAA 72 bp | GCTGAGGTAGCCGTGGTGACTGTAGTCAGATCTGTCTaGGTGATGTCGCACTGGGGAGCAGGAATCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AEVAVVTVVRSV*VMSHWGAGILA Trigger: TGCCAGGATTCCTGCTCCCCAGTGCGACATCACCAAGACAGATCTGACTACAGTCACCACGGCTACCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS CAA 90 bp | TCCTCTTGTTTGCTGGGAAGCGTGACTTCCAGAGAGTCCTGCATCTaGCTGTATACCGCTAACTTCTGCTGGCCAGGTTGGGGAGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: SSCLLGSVTSRESCI*LYTANFCWPGWGAG Trigger: TCCGGCTCCCCAACCTGGCCAGCAGAAGTTAGCGGTATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS CAA 90 bp | TCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCTTGTTaGCTGGGAAGCGTGACTTCCAGAGAGTCCTGCATCTTGCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSSSSSSC*LGSVTSRESCILLY Trigger: ATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS CAA 90 bp | TTTCTCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCTaGTTTGCTGGGAAGCGTGACTTCCAGAGAGTCCTGCATCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLLLLLILLLLLLLL*FAGKRDFQRVLHLA Trigger: AGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS TCA 72 bp | CCTCCTCCTCCTCCTCCTCTTGTTTGCTGGGAAGCGTaGCTTCCAGAGAGTCCTGCATCTTGCTGTATACCG | + |
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Preference number: 6 (lower is better) Translates to: PPPPPPLVCWEA*LPESPASCCIP Trigger: CGGTATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAAACAAGAGGAGGAGGAGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS TCA 72 bp | GATGTCCACTGTCCCATGAAAGGCTCCGGCCCATGCTaGGGTAGCCGTGGTGACTGTAGTCAGATCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DVHCPMKGSGPC*GSRGDCSQICL Trigger: AAGACAGATCTGACTACAGTCACCACGGCTACCTCAGCATGGGCCGGAGCCTTTCATGGGACAGTGGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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| CDS CAA 72 bp | TTGCTGGGAAGCGTGACTTCCAGAGAGTCCTGCATCTaGCTGTATACCGCTAACTTCTGCTGGCCAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLGSVTSRESCI*LYTANFCWPGW Trigger: CCAACCTGGCCAGCAGAAGTTAGCGGTATACAGCAAGATGCAGGACTCTCTGGAAGTCACGCTTCCCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168064.3 |
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| CDS GCA 72 bp | AGCCCCATCTTGCTTTTTGAAATGGCAGATTCGGGATaGAAGGTGTTGGCTTGGCCCAAAGCTCTTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPILLFEMADSG*KVLAWPKALEK Trigger: CTTCTCAAGAGCTTTGGGCCAAGCCAACACCTTGCATCCCGAATCTGCCATTTCAAAAAGCAAGATGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168064.3 ENSMUST00000227997.2 |
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