Pregenerated sensors for VGLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031131Ensembl transcript IDs: ENSMUST00000033465.10, ENSMUST00000114745.9, ENSMUST00000114746.2, ENSMUST00000141936.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGCCCATGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTaGAACAATGAACAGCAGGCCGGTTTCTGTGCATCCACCACACAA | + |
|
Preference number: 1 (lower is better) Translates to: EGPWHPRNRTVDKMR*NNEQQAGFCASTTQ Trigger: TTGTGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCATGGGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR TCA 90 bp | ATGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATaGACAGCAGGCCGGTTTCTGTGCATCCACCACACAAGAGCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: MASEEQDSRQDEVEQ*TAGRFLCIHHTRAL Trigger: AAGAGCTCTTGTGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR TCA 90 bp | TCCAGGCTATTAGGTAACAGCAGGTATGACATAAATGGGGAACACTaGTGCCAGGGGATTCCAGGGTTGTCATGTGGCAAGTGCCCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: SRLLGNSRYDINGEH*CQGIPGLSCGKCPD Trigger: GTCTGGGCACTTGCCACATGACAACCCTGGAATCCCCTGGCATCAGTGTTCCCCATTTATGTCATACCTGCTGTTACCTAATAGCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 90 bp | CATAAATGGGGAACACTGATGCCAGGGGATTCCAGGGTTGTCATGTaGCAAGTGCCCAGACCATACAGAAATGATGCCGTCTACAAGACT | + |
|
Preference number: 1 (lower is better) Translates to: HKWGTLMPGDSRVVM*QVPRPYRNDAVYKT Trigger: AGTCTTGTAGACGGCATCATTTCTGTATGGTCTGGGCACTTGCCACATGACAACCCTGGAATCCCCTGGCATCAGTGTTCCCCATTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR GCA 90 bp | TCAAAGCAAGGGGTAACAGAAACTCATGAAAGTGCAACCAAGAAATaGCCTGAATCTTCTAGAGTAGGTTCTGCTCCGTGCTGGAACAAG | + |
|
Preference number: 1 (lower is better) Translates to: SKQGVTETHESATKK*PESSRVGSAPCWNK Trigger: CTTGTTCCAGCACGGAGCAGAACCTACTCTAGAAGATTCAGGGCATTTCTTGGTTGCACTTTCATGAGTTTCTGTTACCCCTTGCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 90 bp | AAAAGCACAGTGCAATGTAAAAGAGAGCAGCAAATTCGCCTGATTTaGTATTTCTTAGCAGCAGGGACAGAAAGAGACGGTGATGCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: KSTVQCKREQQIRLI*YFLAAGTERDGDAS Trigger: AGAGGCATCACCGTCTCTTTCTGTCCCTGCTGCTAAGAAATACCAAATCAGGCGAATTTGCTGCTCTCTTTTACATTGCACTGTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCCATCTTGGTTCAAAGGACAATGCTGAGGGCCCATGGCATCCGAGGAACGTAGACAAGATGAGGTaGAACAATGAACAGCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GLHLGSKDNAEGPWHPRNVDKMR*NNEQQA Trigger: GGCCTGCTGTTCATTGTTCCACCTCATCTTGTCTAC...GTTCCTCGGATGCCATGGGCCCTCAGCATTGTCCTTTGAACCAAGATGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGATGAGGTGGAACAATGAACAGCAGGCCGGTTTCTGTGCATCCACCACACAAATTCGCCTGATTTaGTATTTCTTAGCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DKMRWNNEQQAGFCASTTQIRLI*YFLAAG Trigger: CCCTGCTGCTAAGAAATACCAAATCAGGCGAATTTG...TGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAAACTCATGAAAGTGCAACCAAGAAATGCCCTGAATCTTCTAGAGTAGGTATCAGGCTGCGCGCGTaGGCACACACACAAATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TETHESATKKCPESSRVGIRLRA*AHTQIL Trigger: GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGAT...ACCTACTCTAGAAGATTCAGGGCATTTCTTGGTTGCACTTTCATGAGTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCAACAGTAGACAAGATGAGGTaGAACAATGAACAGCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: CSSNLAITIVVSTWMSPTVDKMR*NNEQQA Trigger: GGCCTGCTGTTCATTGTTCCACCTCATCTTGTCTAC...TGTTGGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTGCACACCGTTTTTATTTGGCCTTTCTCTAAGGAAGGAGTGAGGTTGACTCAAATTCGCCTGATTTaGTATTTCTTAGCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLHTVFIWPFSKEGVRLTQIRLI*YFLAAG Trigger: CCCTGCTGCTAAGAAATACCAAATCAGGCGAATTTG...AGTCAACCTCACTCCTTCCTTAGAGAAAGGCCAAATAAAAACGGTGTGCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAACTCATGAAAGTGCAACCAAGAAATGCCCTGAATCTTCTAGAGTAGGTTCTAGCGAAATATTTCACTaGACATATCCCTATAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ETHESATKKCPESSRVGSSEIFH*TYPYRD Trigger: GTCTCTATAGGGATATGTCCAGTGAAATATTTCGCT...AGAACCTACTCTAGAAGATTCAGGGCATTTCTTGGTTGCACTTTCATGAGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 72 bp | GGAACACTGATGCCAGGGGATTCCAGGGTTGTCATGTaGCAAGTGCCCAGACCATACAGAAATGATGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: GTLMPGDSRVVM*QVPRPYRNDAV Trigger: GACGGCATCATTTCTGTATGGTCTGGGCACTTGCCACATGACAACCCTGGAATCCCCTGGCATCAGTGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR TCA 72 bp | GAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATaGACAGCAGGCCGGTTTCTGTGCATCCACCACACA | + |
|
Preference number: 3 (lower is better) Translates to: EEQDSRQDEVEQ*TAGRFLCIHHT Trigger: TGTGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR TCA 72 bp | TTAGGTAACAGCAGGTATGACATAAATGGGGAACACTaGTGCCAGGGGATTCCAGGGTTGTCATGTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGNSRYDINGEH*CQGIPGLSCGK Trigger: CTTGCCACATGACAACCCTGGAATCCCCTGGCATCAGTGTTCCCCATTTATGTCATACCTGCTGTTACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGAGCAGCCTCATAAAATCCCATGGGCTCCATCTTGGTTCAAAGGACAAGCAAATTCGCCTGATTaGGTATTTCTTAGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EAEQPHKIPWAPSWFKGQANSPD*VFLSSR Trigger: CCTGCTGCTAAGAAATACCAAATCAGGCGAATTTGC...TTGTCCTTTGAACCAAGATGGAGCCCATGGGATTTTATGAGGCTGCTCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 72 bp | GTGCAATGTAAAAGAGAGCAGCAAATTCGCCTGATTTaGTATTTCTTAGCAGCAGGGACAGAAAGAGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: VQCKREQQIRLI*YFLAAGTERDG Trigger: ACCGTCTCTTTCTGTCCCTGCTGCTAAGAAATACCAAATCAGGCGAATTTGCTGCTCTCTTTTACATTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 72 bp | GAGATGACTAGCAACCTTTTGCACACCGTTTTTATTTaGCCTTTCTCTAAGGAAGGAGTGAGGTTGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EMTSNLLHTVFI*PFSKEGVRLTA Trigger: TGCAGTCAACCTCACTCCTTCCTTAGAGAAAGGCCAAATAAAAACGGTGTGCAAAAGGTTGCTAGTCATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCAACAGCTGGAACAAGGCACTaGTTCAATTTCCATCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSSNLAITIVVSTWMSPTAGTRH*FNFHLR Trigger: TCTGAGATGGAAATTGAACAAGTGCCTTGTTCCAGC...TGTTGGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CCA 72 bp | TCTCTAGAACTGAATTTTCTAAGCGAAATATTTCACTaGACATATCCCTATAGAGACTTTCCAGTTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLELNFLSEIFH*TYPYRDFPVPL Trigger: GAGAGGAACTGGAAAGTCTCTATAGGGATATGTCCAGTGAAATATTTCGCTTAGAAAATTCAGTTCTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR TCA 72 bp | TCAATTTCCATCTCAGATTTCCCGACAATAGTCCTTTaGATCAGTTCTCTAGAACTGAATTTTCTAAGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SISISDFPTIVL*ISSLELNFLSE Trigger: TTCGCTTAGAAAATTCAGTTCTAGAGAACTGATTCAAAGGACTATTGTCGGGAAATCTGAGATGGAAATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACCGGCTCCAGAGGAAGTaGAGAGGGGGTCTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSTGEKAVSGCARAHTHRLQRK*RGGLGH Trigger: ATGCCCAAGACCCCCTCTGCACTTCCTCTGGAGCCG...GTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACGTGCAGAGGGGGTCTTaGGCATGGACAGTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFWIHGRKSSIRLRACAHVQRGS*AWTVSA Trigger: AGCACTCACTGTCCATGCCCAAGACCCCCTCTGCAC...GTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAAGGCTGCAGTTCTCCCTaGCAGCAGGTTCCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSTGEKAVSGCARAHTHKGCSSP*QQVPED Trigger: ATCCTCTGGAACCTGCTGCCAGGGAGAACTGCAGCC...TTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACATTTGTGGGGCCTCTTaGGGTTACGCAGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFWIHGRKSSIRLRACAHICGAS*GYAELW Trigger: CCAGAGCTCTGCGTAACCTCAAGAGGCCCCACAAAT...GTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCATCTTGGTTCAAAGGACAATGCTGAGGGCCCATGGCATCCGAGGAACATTTGTGGGGCCTCTTaGGGTTACGCAGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLHLGSKDNAEGPWHPRNICGAS*GYAELW Trigger: CCAGAGCTCTGCGTAACCTCAAGAGGCCCCACAAAT...GTTCCTCGGATGCCATGGGCCCTCAGCATTGTCCTTTGAACCAAGATGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCGGCTCCAGAGGAAGTaGAGAGGGGGTCTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHGRKSSIRLRACAHTQIRLQRK*RGGLGH Trigger: ATGCCCAAGACCCCCTCTGCACTTCCTCTGGAGCCG...AATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCGGCTGCAGTTCTCCCTaGCAGCAGGTTCCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKSSIRLRACAHTQILGCSSP*QQVPED Trigger: ATCCTCTGGAACCTGCTGCCAGGGAGAACTGCAGCC...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATATTTGTGGGGCCTCTTaGGGTTACGCAGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPREKKQYQAARVRTHTNICGAS*GYAELW Trigger: CCAGAGCTCTGCGTAACCTCAAGAGGCCCCACAAAT...ATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCGTGCAGAGGGGGTCTTaGGCATGGACAGTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSIRLRACAHTQILFVQRGS*AWTVSA Trigger: AGCACTCACTGTCCATGCCCAAGACCCCCTCTGCAC...GAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTGCTTCCAGCTATCTTaGCAGGGCTGCAGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGRKSSIRLRACAHTQILCFQLS*QGCSSP Trigger: GGGAGAACTGCAGCCCTGCCAAGATAGCTGGAAGCA...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | CCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTGGGCATGGACAGTaGGTGCTGATCCATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PREKKQYQAARVRTHTNSLGHGQ*VLIHSL Trigger: AAGGCTATGGATCAGCACTCACTGTCCATGCCCAAG...AGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTGCTGGACTAAATGTTaGAGGGGCCCACATCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPREKKQYQAARVRTHTNCWTKC*RGPHLP Trigger: TGGGAGATGTGGGCCCCTTCAACATTTAGTCCAGCA...ATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GGAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACAACCTCTGGAGTCAGATaGCTGTCAGGAAAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GILDPREKKQYQAARVRTTSGVR*LSGKTW Trigger: CCATGTCTTTCCTGACAGGCATCTGACTCCAGAGGT...TGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACCTCTGGAGTCAGATaGCTGTCAGGAAAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFWIHGRKSSIRLRACAHTSGVR*LSGKTW Trigger: CCATGTCTTTCCTGACAGGCATCTGACTCCAGAGGT...GTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCGAGGAACTGCATTTGTaGGGCCTCTTGAGGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: STGEKAVSGCARAHTHKFEELHL*GLLRLR Trigger: GCGTAACCTCAAGAGGCCCCACAAATGCAGTTCCTC...GAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATGGGGCATGCTCTTATTaGTTCCCTTCTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPREKKQYQAARVRTHTNGACSY*FPSPPQ Trigger: CTGTGGAGGAGAAGGGAACCAATAAGAGCATGCCCC...ATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACATTCAGGAGATGCTGCTaGCTGTGCAATTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDPREKKQYQAARVRTHTFRRCC*LCNCPR Trigger: TCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAA...TGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACCCAAGCTGCTGCTTCTaGCACCATTTTCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EFWIHGRKSSIRLRACAHPSCCF*HHFQEM Trigger: CATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTGG...GTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTAGGGGGTCTTGGGCATaGACAGTGAGTGCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEKAVSGCARAHTHKFSRGSWA*TVSADP Trigger: TGGATCAGCACTCACTGTCCATGCCCAAGACCCCCT...AGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTAGGGGGTCTTGGGCATaGACAGTGAGTGCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: REKKQYQAARVRTHTNSLRGSWA*TVSADP Trigger: TGGATCAGCACTCACTGTCCATGCCCAAGACCCCCT...AAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCAGGCTGCAGTTCTCCCTaGCAGCAGGTTCCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GEKAVSGCARAHTHKFSSGCSSP*QQVPED Trigger: ATCCTCTGGAACCTGCTGCCAGGGAGAACTGCAGCC...TGAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTTCATCATCAAGACTaGCACTGGCAGCTCCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSTGEKAVSGCARAHTHKFHHQD*HWQLHE Trigger: CTCGTGGAGCTGCCAGTGCCAGTCTTGATGATGAAA...TTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACTTTCATCATCAAGACTaGCACTGGCAGCTCCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: EFWIHGRKSSIRLRACAHFHHQD*HWQLHE Trigger: CTCGTGGAGCTGCCAGTGCCAGTCTTGATGATGAAA...GTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GGAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACAATTGTCACTGTGACTTaGGGAACTGCATTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GILDPREKKQYQAARVRTIVTVT*GTAFVG Trigger: CCCCACAAATGCAGTTCCTCAAGTCACAGTGACAAT...TGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | ACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTCTTGGGCATGGACAGTaGGTGCTGATCCATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGEKAVSGCARAHTHKFSLGHGQ*VLIHSL Trigger: AAGGCTATGGATCAGCACTCACTGTCCATGCCCAAG...AGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTAACACTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCCGGCTCCAGAGGAAGTaGAGAGGGGGTCTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVTLWADFGPTIQSEKQSRLQRK*RGGLGH Trigger: ATGCCCAAGACCCCCTCTGCACTTCCTCTGGAGCCG...GCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAGTGTTACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCATCTTGGTTCAAAGGACAATGCTGAGGGCCCATGGCATCCGAGGAACGGTTACGCAGAGCTCTaGAGAAATGTTCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHLGSKDNAEGPWHPRNGYAEL*RNVHPP Trigger: TGGTGGATGAACATTTCTCCAGAGCTCTGCGTAACC...GTTCCTCGGATGCCATGGGCCCTCAGCATTGTCCTTTGAACCAAGATGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCCTCTATCCGTGTGGCTaGTGTCCGTCCGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKSSIRLRACAHTQILLYPCG*CPSVFY Trigger: ATAAAACACGGACGGACACCAGCCACACGGATAGAG...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCATCTTGGTTCAAAGGACAATGCTGAGGGCCCATGGCATCCGAGGAACTTCAGGAGATGCTGCTaGCTGTGCAATTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLHLGSKDNAEGPWHPRNFRRCC*LCNCPR Trigger: TCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAA...GTTCCTCGGATGCCATGGGCCCTCAGCATTGTCCTTTGAACCAAGATGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GGAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACCTGAATTTTCAGTTTaGCTGGATTCGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GILDPREKKQYQAARVRTPEFSV*LDSTLR Trigger: GCGCAAAGTCGAATCCAGTCAAACTGAAAATTCAGG...TGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCAGATGCTGCTGGCTGTaGAATTGTCCAAGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STGEKAVSGCARAHTHKFRCCWL*NCPRRE Trigger: CTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCT...GAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GGAATTCTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACAATTTTCAGGAGATGCTaGTGGCTGTGCAATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GILDPREKKQYQAARVRTIFRRC*WLCNCP Trigger: TGGACAATTGCACAGCCAGCAGCATCTCCTGAAAAT...TGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAGAATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCGGTTACGCAGAGCTCTaGAGAAATGTTCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HGRKSSIRLRACAHTQILGYAEL*RNVHPP Trigger: TGGTGGATGAACATTTCTCCAGAGCTCTGCGTAACC...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACATCCAGAGGATGGTTTTaGTATCTATCTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LDPREKKQYQAARVRTHTSRGWF*YLSCWT Trigger: AGTCCAGCAAGATAGATACCAAAACCATCCTCTGGA...TGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGCTTGGGCATGGACAGTaGGTGCTGATCCATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQLGHGQ*VLIHSL Trigger: AAGGCTATGGATCAGCACTCACTGTCCATGCCCAAG...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCAGATGCTGCTGGCTGTaGAATTGTCCAAGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSIRLRACAHTQILFRCCWL*NCPRRE Trigger: CTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCT...GAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | CCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTATTCATCCAAGCTGCTaGTTCTGGCACCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PREKKQYQAARVRTHTNSIHPSC*FWHHFQ Trigger: CTGAAAATGGTGCCAGAAGCAGCAGCTTGGATGAAT...AGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGGAGGAACTGCATTTGTaGGGCCTCTTGAGGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQEELHL*GLLRLR Trigger: GCGTAACCTCAAGAGGCCCCACAAATGCAGTTCCTC...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGATGAGGTGGAACAATGAACAGCAGGCCGGTTTCTGTGCATCCACCACACTCTATCCGTGTGGCTaGTGTCCGTCCGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DKMRWNNEQQAGFCASTTLYPCG*CPSVFY Trigger: ATAAAACACGGACGGACACCAGCCACACGGATAGAG...TGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTAACACTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCAGGGGGTCTTGGGCATaGACAGTGAGTGCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTLWADFGPTIQSEKQSRGSWA*TVSADP Trigger: TGGATCAGCACTCACTGTCCATGCCCAAGACCCCCT...GCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAGTGTTACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATCCAGAGGATGGTTTTaGTATCTATCTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSTGEKAVSGCARAHTHKSRGWF*YLSCWT Trigger: AGTCCAGCAAGATAGATACCAAAACCATCCTCTGGA...TTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCAATTGTCACTGTGACTTaGGGAACTGCATTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKAVSGCARAHTHKFSSIVTVT*GTAFVG Trigger: CCCCACAAATGCAGTTCCTCAAGTCACAGTGACAAT...TGAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCCCTGAATTTTCAGTTTaGCTGGATTCGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSIRLRACAHTQILFPEFSV*LDSTLR Trigger: GCGCAAAGTCGAATCCAGTCAAACTGAAAATTCAGG...GAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | CGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCCTGAATTTTCAGTTTaGCTGGATTCGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: REKKQYQAARVRTHTNSLPEFSV*LDSTLR Trigger: GCGCAAAGTCGAATCCAGTCAAACTGAAAATTCAGG...AAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTATTTTCAGGAGATGCTaGTGGCTGTGCAATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHGRKSSIRLRACAHTQIIFRRC*WLCNCP Trigger: TGGACAATTGCACAGCCAGCAGCATCTCCTGAAAAT...AATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTAACACTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCGGGGCATGCTCTTATTaGTTCCCTTCTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVTLWADFGPTIQSEKQSGACSY*FPSPPQ Trigger: CTGTGGAGGAGAAGGGAACCAATAAGAGCATGCCCC...GCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAGTGTTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGCCAAGCTGCTGCTTCTaGCACCATTTTCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQPSCCF*HHFQEM Trigger: CATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTGG...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCTTACCGGTTTTTGACTaGTTTCAGGTATCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSIRLRACAHTQILFLPVFD*FQVSRH Trigger: GTGTCTGGATACCTGAAAGCAGTCAAAAACCGGTAA...GAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCTTCAATTCATCCAAGCTGCTaGTTCTGGCACCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEKAVSGCARAHTHKFSSIHPSC*FWHHFQ Trigger: CTGAAAATGGTGCCAGAAGCAGCAGCTTGGATGAAT...TGAAGAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGGGTTACGCAGAGCTCTaGAGAAATGTTCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQGYAEL*RNVHPP Trigger: TGGTGGATGAACATTTCTCCAGAGCTCTGCGTAACC...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGTTCAGGAGATGCTGCTaGCTGTGCAATTGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQFRRCC*LCNCPR Trigger: TCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAA...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCAGCCTCATACCAAGCTGCTGCTTCTaGCACCATTTTCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LWADFGPTIQSEKQSSLIPSCCF*HHFQEM Trigger: CATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTGG...TATGAGGCTGCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCAGGCCGGTTTCTGTGCATCCACCACACAAGAGCTCTTTCCTACATTTTTTTCATCATCAAGACTaGCACTGGCAGCTCCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSRPVSVHPPHKSSFLHFFHHQD*HWQLHE Trigger: CTCGTGGAGCTGCCAGTGCCAGTCTTGATGATGAAA...AAAATGTAGGAAAGAGCTCTTGTGTGGTGGATGCACAGAAACCGGCCTGCTGTT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTAACACTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCAGATGCTGCTGGCTGTaGAATTGTCCAAGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVTLWADFGPTIQSEKQSRCCWL*NCPRRE Trigger: CTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCT...GCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAGTGTTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCACACCGTTTTTATTTGGCCTTTCTCTAAGGAAGGAGTGAGGTTGACTTGCTTCCAGCTATCTTaGCAGGGCTGCAGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTVFIWPFSKEGVRLTCFQLS*QGCSSP Trigger: GGGAGAACTGCAGCCCTGCCAAGATAGCTGGAAGCA...AGTCAACCTCACTCCTTCCTTAGAGAAAGGCCAAATAAAAACGGTGTGCAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAACTCATGAAAGTGCAACCAAGAAATGCCCTGAATCTTCTAGAGTAGGTTGCTGGACTAAATGTTaGAGGGGCCCACATCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TETHESATKKCPESSRVGCWTKC*RGPHLP Trigger: TGGGAGATGTGGGCCCCTTCAACATTTAGTCCAGCA...ACCTACTCTAGAAGATTCAGGGCATTTCTTGGTTGCACTTTCATGAGTTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTCATGAAAGTGCAACCAAGAAATGCCCTGAATCTTCTAGAGTAGGTTCTTGCTGGACTAAATGTTaGAGGGGCCCACATCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETHESATKKCPESSRVGSCWTKC*RGPHLP Trigger: TGGGAGATGTGGGCCCCTTCAACATTTAGTCCAGCA...AGAACCTACTCTAGAAGATTCAGGGCATTTCTTGGTTGCACTTTCATGAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTAACACTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCTCCAGAGGATGGTTTTaGTATCTATCTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVTLWADFGPTIQSEKQSSRGWF*YLSCWT Trigger: AGTCCAGCAAGATAGATACCAAAACCATCCTCTGGA...GCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAGTGTTACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAACTGAACCTTGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGCTTCCAGCTATCTTaGCAGGGCTGCAGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPTEPCSSNLAITIVVSTCFQLS*QGCSSP Trigger: GGGAGAACTGCAGCCCTGCCAAGATAGCTGGAAGCA...TGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACAAGGTTCAGTTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCAACACTCTATCCGTGTGGCTaGTGTCCGTCCGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLAITIVVSTWMSPTLYPCG*CPSVFY Trigger: ATAAAACACGGACGGACACCAGCCACACGGATAGAG...TGTTGGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGCATCCACCACACAAGAGCTCTTTCCTACATTTTATAAGCTAGGAATTGGGGCATGCTCTTATTaGTTCCCTTCTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FCASTTQELFPTFYKLGIGACSY*FPSPPQ Trigger: CTGTGGAGGAGAAGGGAACCAATAAGAGCATGCCCC...AATTCCTAGCTTATAAAATGTAGGAAAGAGCTCTTGTGTGGTGGATGCACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCACACCGTTTTTATTTGGCCTTTCTCTAAGGAAGGAGTGAGGTTGACTATTCATCCAAGCTGCTaGTTCTGGCACCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHTVFIWPFSKEGVRLTIHPSC*FWHHFQ Trigger: CTGAAAATGGTGCCAGAAGCAGCAGCTTGGATGAAT...AGTCAACCTCACTCCTTCCTTAGAGAAAGGCCAAATAAAAACGGTGTGCAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGCATCCACCACACAAGAGCTCTTTCCTACATTTTATAAGCTAGGAATTACCTCTGGAGTCAGATaGCTGTCAGGAAAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FCASTTQELFPTFYKLGITSGVR*LSGKTW Trigger: CCATGTCTTTCCTGACAGGCATCTGACTCCAGAGGT...AATTCCTAGCTTATAAAATGTAGGAAAGAGCTCTTGTGTGGTGGATGCACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCTTACCGGTTTTTGACTaGTTTCAGGTATCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFLQLSNNYCGIYMDEPLPVFD*FQVSRH Trigger: GTGTCTGGATACCTGAAAGCAGTCAAAAACCGGTAA...GGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCAACAATTTTCAGGAGATGCTaGTGGCTGTGCAATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLAITIVVSTWMSPTIFRRC*WLCNCP Trigger: TGGACAATTGCACAGCCAGCAGCATCTCCTGAAAAT...TGTTGGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| 3UTR CAA 72 bp | TTCAATTTCCATCTCAGATTTCCCGACAATAGTCCTTaGAATCAGTTCTCTAGAACTGAATTTTCTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FNFHLRFPDNSP*NQFSRTEFSKR Trigger: TCGCTTAGAAAATTCAGTTCTAGAGAACTGATTCAAAGGACTATTGTCGGGAAATCTGAGATGGAAATTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS TCA 90 bp | GAGTCAGATGCCTGTCGGGAAAGACAGGGAAGTAGGCAGGCGCTATaGAGCCTGGCCTCGCTAGGGAGGAGAAGTGCCACGGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESDACRERQGSRQAL*SLASLGRRSATAPE Trigger: CTCTGGAGCCGTGGCACTTCTCCTCCCTAGCGAGGCCAGGCTTCATAGCGCCTGCCTACTTCCCTGTCTTTCCCGACAGGCATCTGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS CCA 90 bp | GACCTCTGGAGTCAGATGCCTGTCGGGAAAGACACGGTAGACCTCTaGAGTCAGATGCCTGTCGGGAAAGACAGGGAAGTAGGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DLWSQMPVGKDTVDL*SQMPVGKDREVGRR Trigger: GCGCCTGCCTACTTCCCTGTCTTTCCCGACAGGCATCTGACTCCAGAGGTCTACCGTGTCTTTCCCGACAGGCATCTGACTCCAGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS-3UTR CAA 90 bp | GGATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAAAGTGCAGAGGGGGTCTaGGGCATGGACAGTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSTGEKAVSGCARAHTHKSAEGV*GMDSEC Trigger: GCACTCACTGTCCATGCCCAAGACCCCCTCTGCACT...TTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 90 bp | CCACGGCTCCAGAGGAAGTGCAGAGGGGGTCTTGGGCATGGACAGTaGGTGCTGATCCATAGCCTTAAGACCATATTCATCCAAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRLQRKCRGGLGHGQ*VLIHSLKTIFIQAA Trigger: AGCAGCTTGGATGAATATGGTCTTAAGGCTATGGATCAGCACTCACTGTCCATGCCCAAGACCCCCTCTGCACTTCCTCTGGAGCCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS CCA 90 bp | GCGATCCTGTGCTTCCAGCTATCTTGGCAGGGCTGCAGTTCTCCCTaGCAGCAGGTTCCAGAGGATGGTTTTGGTATCTATCTTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AILCFQLSWQGCSSP*QQVPEDGFGIYLAG Trigger: TCCAGCAAGATAGATACCAAAACCATCCTCTGGAACCTGCTGCCAGGGAGAACTGCAGCCCTGCCAAGATAGCTGGAAGCACAGGATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS GCA 90 bp | CAAGCTGCTGCTTCTGGCACCATTTTCAGGAGATGCTGCTGGCTGTaGAATTGTCCAAGAAGAGAGATGCCTCTGATTCGGGGGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAAASGTIFRRCCWL*NCPRREMPLIRGHA Trigger: AGCATGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS-3UTR CAA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCCTTGAGGAACTGCATTaGTGGGGCCTCTTGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: HGRKSSIRLRACAHTQILLEELH*WGLLRL Trigger: TAACCTCAAGAGGCCCCACAAATGCAGTTCCTCAAG...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 90 bp | CACAGATTTTCTTCTTGTAGTGGACAGGGTAGGGAGGCAGGTTCATaGGCGATCCTGTGCTTCCAGCTATCTTGGCAGGGCTGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRFSSCSGQGREAGS*AILCFQLSWQGCSS Trigger: AGAACTGCAGCCCTGCCAAGATAGCTGGAAGCACAGGATCGCTCATGAACCTGCCTCCCTACCCTGTCCACTACAAGAAGAAAATCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | CCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTAATTGTCACTGTGACTaGAGGAACTGCATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PREKKQYQAARVRTHTNSNCHCD*RNCICG Trigger: CCCACAAATGCAGTTCCTCAAGTCACAGTGACAATT...AGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | GATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATAATTGTCACTGTGACTaGAGGAACTGCATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPREKKQYQAARVRTHTNNCHCD*RNCICG Trigger: CCCACAAATGCAGTTCCTCAAGTCACAGTGACAATT...ATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | CACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTCTCAATTGTCACTGTGACTaGAGGAACTGCATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGRKSSIRLRACAHTQILNCHCD*RNCICG Trigger: CCCACAAATGCAGTTCCTCAAGTCACAGTGACAATT...GAGAATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | TGGCATCCGAGGAACAGGACAGTAGACAAGATGAGGTGGAACAATGAACAGCAGCTTGAGGAACTGCATTaGTGGGGCCTCTTGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: WHPRNRTVDKMRWNNEQQLEELH*WGLLRL Trigger: TAACCTCAAGAGGCCCCACAAATGCAGTTCCTCAAG...CTGCTGTTCATTGTTCCACCTCATCTTGTCTACTGTCCTGTTCCTCGGATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCACACCGTTTTTATTTGGCCTTTCTCTAAGGAAGGAGTGAGGTTGACTAGTGCAGAGGGGGTCTaGGGCATGGACAGTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHTVFIWPFSKEGVRLTSAEGV*GMDSEC Trigger: GCACTCACTGTCCATGCCCAAGACCCCCTCTGCACT...AGTCAACCTCACTCCTTCCTTAGAGAAAGGCCAAATAAAAACGGTGTGCAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS GCA 90 bp | ATATTCATCCAAGCTGCTGCTTCTGGCACCATTTTCAGGAGATGCTaGTGGCTGTGCAATTGTCCAAGAAGAGAGATGCCTCTGATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFIQAAASGTIFRRC*WLCNCPRREMPLIR Trigger: CCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTGGATGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS-3UTR CAA 90 bp | ATCCACGGGAGAAAAAGCAGTATCAGGCTGCGCGCGTGCGCACACACACAAATTTGTCTTTACCGGTTTTaGACTGCTTTCAGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHGRKSSIRLRACAHTQICLYRF*TAFRYP Trigger: TGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACA...AATTTGTGTGTGTGCGCACGCGCGCAGCCTGATACTGCTTTTTCTCCCGTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTCCAACTTAGCAATAACTATTGTGGTATCTACATGGATGAGCCCAACAAGTGCAGAGGGGGTCTaGGGCATGGACAGTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSNLAITIVVSTWMSPTSAEGV*GMDSEC Trigger: GCACTCACTGTCCATGCCCAAGACCCCCTCTGCACT...TGTTGGGCTCATCCATGTAGATACCACAATAGTTATTGCTAAGTTGGAGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS GCA 90 bp | ACCATATTCATCCAAGCTGCTGCTTCTGGCACCATTTTCAGGAGATaGTGCTGGCTGTGCAATTGTCCAAGAAGAGAGATGCCTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TIFIQAAASGTIFRR*CWLCNCPRREMPLI Trigger: AATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAAAATGGTGCCAGAAGCAGCAGCTTGGATGAATATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGATGAGGTGGAACAATGAACAGCAGGCCGGTTTCTGTGCATCCACCACATGTCTTTACCGGTTTTaGACTGCTTTCAGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: DKMRWNNEQQAGFCASTTCLYRF*TAFRYP Trigger: TGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACA...TGTGGTGGATGCACAGAAACCGGCCTGCTGTTCATTGTTCCACCTCATCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS TCA 90 bp | TCAAATTGTCACTGTGACTTGAGGAACTGCATTTGTGGGGCCTCTTaGGGTTACGCAGAGCTCTGGAGAAATGTTCATCCACCATACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNCHCDLRNCICGAS*GYAELWRNVHPPYC Trigger: ACAGTATGGTGGATGAACATTTCTCCAGAGCTCTGCGTAACCTCAAGAGGCCCCACAAATGCAGTTCCTCAAGTCACAGTGACAATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGCTGATTTTGGTCCCACAATTCAGTCAGAGAAGCAGAGCAGCCTCATATGTCTTTACCGGTTTTaGACTGCTTTCAGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWADFGPTIQSEKQSSLICLYRF*TAFRYP Trigger: TGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACA...TATGAGGCTGCTCTGCTTCTCTGACTGAATTGTGGGACCAAAATCAGCCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033465.10 ENSMUST00000114746.2 |
||
| CDS TCA 72 bp | GCCTGTCGGGAAAGACAGGGAAGTAGGCAGGCGCTATaGAGCCTGGCCTCGCTAGGGAGGAGAAGTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ACRERQGSRQAL*SLASLGRRSAT Trigger: CGTGGCACTTCTCCTCCCTAGCGAGGCCAGGCTTCATAGCGCCTGCCTACTTCCCTGTCTTTCCCGACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS TCA 72 bp | TCTTCTTGTAGTGGACAGGGTAGGGAGGCAGGTTCATaGGCGATCCTGTGCTTCCAGCTATCTTGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCSGQGREAGS*AILCFQLSWQG Trigger: GCCCTGCCAAGATAGCTGGAAGCACAGGATCGCTCATGAACCTGCCTCCCTACCCTGTCCACTACAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS CCA 72 bp | AGTCAGATGCCTGTCGGGAAAGACACGGTAGACCTCTaGAGTCAGATGCCTGTCGGGAAAGACAGGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SQMPVGKDTVDL*SQMPVGKDREV Trigger: TACTTCCCTGTCTTTCCCGACAGGCATCTGACTCCAGAGGTCTACCGTGTCTTTCCCGACAGGCATCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS TCA 72 bp | GCTGGCTGTGCAATTGTCCAAGAAGAGAGATGCCTCTaGTTCGGGGGCATGCTCTTATTGGTTCCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGCAIVQEERCL*FGGMLLLVPFS Trigger: GGAGAAGGGAACCAATAAGAGCATGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS GCA 72 bp | TTGTCCAAGAAGAGAGATGCCTCTGATTCGGGGGCATaGTCTTATTGGTTCCCTTCTCCTCCACAGGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: LSKKRDASDSGA*SYWFPSPPQAR Trigger: ACGTGCCTGTGGAGGAGAAGGGAACCAATAAGAGCATGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS CCA 72 bp | AGTCAGATGCCTGTCAGGAAAGACATGGTAGACCTCTaGAGTCAGATGCCTGTCGGGAAAGACACGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQMPVRKDMVDL*SQMPVGKDTVD Trigger: GTCTACCGTGTCTTTCCCGACAGGCATCTGACTCCAGAGGTCTACCATGTCTTTCCTGACAGGCATCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS CAA 72 bp | TGGCACCATTTTCAGGAGATGCTGCTGGCTGTGCAATaGTCCAAGAAGAGAGATGCCTCTGATTCGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WHHFQEMLLAVQ*SKKRDASDSGA Trigger: TGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAAAATGGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS CAA 90 bp | TGCTGCTTCTGGCACCATTTTCAGGAGATGCTGCTGGCTGTGCAATaGTCCAAGAAGAGAGATGCCTCTGATTCGGGGGCATGCTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: CCFWHHFQEMLLAVQ*SKKRDASDSGACSY Trigger: ATAAGAGCATGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGCAGCATCTCCTGAAAATGGTGCCAGAAGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 ENSMUST00000141936.2 |
||
| CDS TCA 72 bp | CACTGTGACTTGAGGAACTGCATTTGTGGGGCCTCTTaGGGTTACGCAGAGCTCTGGAGAAATGTTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HCDLRNCICGAS*GYAELWRNVHP Trigger: TGGATGAACATTTCTCCAGAGCTCTGCGTAACCTCAAGAGGCCCCACAAATGCAGTTCCTCAAGTCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 72 bp | TTATTCACCCCGTTCTTGAGGGTCAAATTGTCACTGTaGCTTGAGGAACTGCATTTGTGGGGCCTCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFTPFLRVKLSL*LEELHLWGLLR Trigger: CCTCAAGAGGCCCCACAAATGCAGTTCCTCAAGTCACAGTGACAATTTGACCCTCAAGAACGGGGTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS CCA 72 bp | TTCGCTTTGGAGATGGGCTTCTTTCATCATCAAGACTaGCACTGGCAGCTCCACGAGCACAGATTTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FALEMGFFHHQD*HWQLHEHRFSS Trigger: AGAAGAAAATCTGTGCTCGTGGAGCTGCCAGTGCCAGTCTTGATGATGAAAGAAGCCCATCTCCAAAGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 72 bp | ACAGAACCGGCGTTCCACTCTGTCTTTACCGGTTTTTaGCTGCTTTCAGGTATCCAGACACCATTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TEPAFHSVFTGF*LLSGIQTPFFF Trigger: GAAGAAGAATGGTGTCTGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACAGAGTGGAACGCCGGTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 72 bp | ACAGGCACGTCTTTCAGTTCTCCTGAATTTTCAGTTTaGCTGGATTCGACTTTGCGCTCTCTATCCGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGTSFSSPEFSV*LDSTLRSLSVW Trigger: CCACACGGATAGAGAGCGCAAAGTCGAATCCAGTCAAACTGAAAATTCAGGAGAACTGAAAGACGTGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS TCA 72 bp | GCTGGCTGTGCAATTGTCCAAGAAGAGAGATGCCTCTaGTTCGGGGGCATGCTCTTATCTGTATTGATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGCAIVQEERCL*FGGMLLSVLIF Trigger: AAAGATCAATACAGATAAGAGCATGCCCCCGAATCAGAGGCATCTCTCTTCTTGGACAATTGCACAGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141936.2 |
||
| CDS CAA 90 bp | GGTGAAAATGACAGAACCGGCGTTCCACTCTGTCTTTACCGGTTTTaGACTGCTTTCAGGTATCCAGACACCATTCTTCTTCATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GENDRTGVPLCLYRF*TAFRYPDTILLHFL Trigger: GAGGAAATGAAGAAGAATGGTGTCTGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACAGAGTGGAACGCCGGTTCTGTCATTTTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS CCA 72 bp | CTAATAATAGTAGGCATCTCTTCTTCGCTTTGGAGATaGGCTTCTTTCATCATCAAGACTGGCACTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LIIVGISSSLWR*ASFIIKTGTGS Trigger: GCTGCCAGTGCCAGTCTTGATGATGAAAGAAGCCCATCTCCAAAGCGAAGAAGAGATGCCTACTATTATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||
| CDS GCA 72 bp | AACCGGCGTTCCACTCTGTCTTTACCGGTTTTTGACTaGTTTCAGGTATCCAGACACCATTCTTCTTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: NRRSTLSLPVFD*FQVSRHHSSSF Trigger: AAATGAAGAAGAATGGTGTCTGGATACCTGAAAGCAGTCAAAAACCGGTAAAGACAGAGTGGAACGCCGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033465.10 ENSMUST00000114745.9 ENSMUST00000114746.2 |
||