Pregenerated sensors for VGF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037428Ensembl transcript IDs: ENSMUST00000041543.9, ENSMUST00000186451.2, ENSMUST00000187382.2, ENSMUST00000190827.7
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTGGGACTaGGAAGTCGCTAGAGAAACTAGATGGGGACGAGGCCCCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RHFTRLNRTAFPVWD*EVARETRWGRGPWR Trigger: CCTCCAGGGGCCTCGTCCCCATCTAGTTTCTCTAGCGACTTCCCAGTCCCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR CCA 90 bp | GGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTaGGACTGGGAAGTCGCTAGAGAAACTAGATGGGGACGAGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GDRHFTRLNRTAFPV*DWEVARETRWGRGP Trigger: GGGGCCTCGTCCCCATCTAGTTTCTCTAGCGACTTCCCAGTCCCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCCGGCGCATGCAAACACTaGGAGGGAGGAGGAGCGACA | + |
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Preference number: 2 (lower is better) Translates to: GEVGKFTAIWRRGEAPGAGACKH*EGGGAT Trigger: TGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCC...GGCCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTGGCGCATGCAAACACTaGGAGGGAGGAGGAGCGACA | + |
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Preference number: 2 (lower is better) Translates to: CLRVLCVLDCRPQGSLTGGACKH*EGGGAT Trigger: TGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCC...ACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAAAAGTTCACAGCAATTTaGAGAAGAGGGGAGGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: FLSKTISSVRGIYNREGEKFTAI*RRGEAP Trigger: CGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTT...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR CCA 72 bp | CCCGTCTGGGACTGGGAAGTCGCTAGAGAAACTAGATaGGGACGAGGCCCCTGGAGGAAGTGGGGATATAAG | + |
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Preference number: 3 (lower is better) Translates to: PVWDWEVARETR*GRGPWRKWGYK Trigger: CTTATATCCCCACTTCCTCCAGGGGCCTCGTCCCCATCTAGTTTCTCTAGCGACTTCCCAGTCCCAGACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| 3UTR CCA 72 bp | CACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTaGGACTGGGAAGTCGCTAGAGAAACTAGATGGGGA | + |
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Preference number: 3 (lower is better) Translates to: HFTRLNRTAFPV*DWEVARETRWG Trigger: TCCCCATCTAGTTTCTCTAGCGACTTCCCAGTCCCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR TCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGGAGCCGCCCAGGAATaGGCCCTCGAGCCGGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEGAAQE*ALEPAH Trigger: GTGCGCCGGCTCGAGGGCTCATTCCTGGGCGGCTCC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACTCTTGCGCCGCGGCCTaGCGGGTGGCCTCCGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDSCAAA*RVASAC Trigger: ACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGA...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGACATGGGTCGGGGCTaGGGCAGCCCTGGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDDMGRG*GSPGRR Trigger: CCGCCTCCCAGGGCTGCCCCAGCCCCGACCCATGTC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGATCTTGCGCCGCGGCCTaGCGGGTGGCCTCCGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGSCAAA*RVASAC Trigger: ACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGA...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCCAGCCGCTCTTCTTaGGCCGCGGCCTGCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGASRSS*AAACRV Trigger: CACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGCGGGAGGTGGGGGCTaGGGAGAGCGGACATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEAGGGG*GERTWV Trigger: GACCCATGTCCGCTCTCCGCAGCCCCCACCTCCCGC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTGCGGAGAGCGGACATaGGTCGGGGCTGGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTECGERT*VGAGAA Trigger: GGCTGCCCCAGCCCCGACCCATGTCCGCTCTCCGCA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACTGCGGAGAGCGGACATaGGTCGGGGCTGGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDCGERT*VGAGAA Trigger: GGCTGCCCCAGCCCCGACCCATGTCCGCTCTCCGCA...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTGCGCGCGCCTGGCCTaGGCCTCCAGATCCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTECARLA*ASRSGW Trigger: CCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCGCA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACTGCGCGCGCCTGGCCTaGGCCTCCAGATCCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDCARLA*ASRSGW Trigger: CCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCGCA...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGAGGATGCGGGCGGCTaGAGTGTCCGCGGCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDEDAGG*SVRGRM Trigger: CATTCGGCCGCGGACACTGCAGCCGCCCGCATCCTC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAAGCTCCTCCTGCTCCTaGAGCCGGCGCTCCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGSSSCS*SRRSSA Trigger: CGCGGAGGAGCGCCGGCTGCAGGAGCAGGAGGAGCT...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGCGCCACACGCGCTCTaGCCCGGGGCTCTCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDAPHAL*PGALQI Trigger: AATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGACTTCCGCCGATGGCCTaGCGCCTCCTCCTGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGLPPMA*RLLLGA Trigger: CGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAG...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGCATCCTTCCGCCGATaGCCTGGCGCCTCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDASFRR*PGASSW Trigger: CCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR TCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCGGGGCTCTCCAGATTaGCTCGGGTCAGCGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTERGSPD*LGSACA Trigger: CGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCG...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR TCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCGGGGCTCTCCAGATTaGCTCGGGTCAGCGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDRGSPD*LGSACA Trigger: CGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACAAGCAGGCGCTCTCCTaGCTCGGAGCCGCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDKQALS*LGAAQE Trigger: TTCCTGGGCGGCTCCGAGGCAGGAGAGCGCCTGCTT...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGCCAGCCGCTCTTCTTaGGCCGCGGCCTGCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCASRSS*AAACRV Trigger: CACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGC...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACAACAGGAGTGCGTTCTaGCGCGCCCTCTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDNRSAF*RALSAS Trigger: GGAGGCGGAGAGGGCGCGGCAGAACGCACTCCTGTT...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCTCGGCGAACAGGAGTaGGTTCTGCCGCGCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDLGEQE*VLPRPL Trigger: GAGAGGGCGCGGCAGAACGCACTCCTGTTCGCCGAG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTTCTCCAGCTCCTCCTaGTCCTGCAGCCGGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEFSSSS*SCSRRS Trigger: GGAGCGCCGGCTGCAGGAGCAGGAGGAGCTGGAGAA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCGGGGATCCACGCCCTaGAAGAGCTCTCCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDRGSTP*KSSPWS Trigger: GGACCAGGGAGAGCTCTTCCAGGGCGTGGATCCCCG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCGCCACACGCGCTCTaGCCCGGGGCTCTCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGAPHAL*PGALQI Trigger: AATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTCCGGAACGCGCGCCTaGAACTCTCCCCAGGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTESGTRA*NSPQEA Trigger: CGCTTCCTGGGGAGAGTTCCAGGCGCGCGTTCCGGA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCCTGGCGCCTCCTCCTaGGAGCGTTTGTCCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEPGASS*ERLSSA Trigger: AGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGG...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCCTGGCGCCTCCTCCTaGGAGCGTTTGTCCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDPGASS*ERLSSA Trigger: AGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGCCTCCAGATCCGGATaGTGGCGCGCAGGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEASRSG*WRAGGN Trigger: GTTGCCACCTGCGCGCCACCATCCGGATCTGGAGGC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR TCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGGAGGCTATGGGTCTaGCTGCGCACGGACTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGGRLWV*LRTDSV Trigger: GACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGACTCGCACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGGGTCAGCGTGTGCGTaGGGGTTTCAGTCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GDSHKPHTRLGWPRDCLRGSACA*GFQSLL Trigger: CAGCAGAGACTGAAACCCGCACGCACACGCTGACCC...TCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTGCGAGTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACTGCCGGGCTCCGCCCTaGAACAGATACTGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDCRAPP*NRYWSS Trigger: GCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCA...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTGCCGGGCTCCGCCCTaGAACAGATACTGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTECRAPP*NRYWSS Trigger: GCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGGCGGGAGGTGGGGGCTaGGGAGAGCGGACATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQAGGGG*GERTWV Trigger: GACCCATGTCCGCTCTCCGCAGCCCCCACCTCCCGC...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGATTCTCCAGCTCCTCCTaGTCCTGCAGCCGGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGFSSSS*SCSRRS Trigger: GGAGCGCCGGCTGCAGGAGCAGGAGGAGCTGGAGAA...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGATCCGGAACGCGCGCCTaGAACTCTCCCCAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGSGTRA*NSPQEA Trigger: CGCTTCCTGGGGAGAGTTCCAGGCGCGCGTTCCGGA...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTCTTCCGCCGATGGCCTaGCGCCTCCTCCTGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCLPPMA*RLLLGA Trigger: CGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAG...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGACATGGGTCGGGGCTaGGGCAGCCCTGGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPDMGRG*GSPGRR Trigger: CCGCCTCCCAGGGCTGCCCCAGCCCCGACCCATGTC...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGGGTCAGCGTGTGCGTaGGGGTTTCAGTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEGSACA*GFQSLL Trigger: CAGCAGAGACTGAAACCCGCACGCACACGCTGACCC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGAGGATGCGGGCGGCTaGAGTGTCCGCGGCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCEDAGG*SVRGRM Trigger: CATTCGGCCGCGGACACTGCAGCCGCCCGCATCCTC...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCCCTGCAACAGATACTaGAGCAGCAGGTCGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDPCNRY*SSRSEA Trigger: CGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGATGCGGAGAGCGGACATaGGTCGGGGCTGGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLQTPGKSDRSGADRTRCGERT*VGAGAA Trigger: GGCTGCCCCAGCCCCGACCCATGTCCGCTCTCCGCA...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAGGAGCCGCCCAGGAATaGGCCCTCGAGCCGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRGAAQE*ALEPAH Trigger: GTGCGCCGGCTCGAGGGCTCATTCCTGGGCGGCTCC...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGCTATGGGTCTGACTaGGCACGGACTCGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGGYGSD*ARTRSA Trigger: TGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGCGGGTTTCAGTCTCTaGTGCCGCCGTCTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDAGFSL*CRRLLL Trigger: CAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGACTCGGGTCAGCGTGTaGGTGCGGGTTTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTETRVSV*VRVSVS Trigger: AGAGACTGAAACCCGCACGCACACGCTGACCCGAGT...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTAAGCAGGCGCTCTCCTaGCTCGGAGCCGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCKQALS*LGAAQE Trigger: TTCCTGGGCGGCTCCGAGGCAGGAGAGCGCCTGCTT...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGCTCGGCGAACAGGAGTaGGTTCTGCCGCGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQLGEQE*VLPRPL Trigger: GAGAGGGCGCGGCAGAACGCACTCCTGTTCGCCGAG...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCCAGCTCCTCCTGCTCCTaGAGCCGGCGCTCCTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GEVGKFTAIWRRGEAPGASSSCS*SRRSSA Trigger: CGCGGAGGAGCGCCGGCTGCAGGAGCAGGAGGAGCT...GGCCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGACTCGCACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGCTGCTCCCAACCCCTaGATCAGTAGAAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDSHKPHTRLGWPRDCLRAAPNP*ISRRKQ Trigger: CTGCTTCCTTCTACTGATCCAGGGGTTGGGAGCAGC...TCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTGCGAGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGAGCATCCTTCCGCCGATaGCCTGGCGCCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLQTPGKSDRSGADRTRASFRR*PGASSW Trigger: CCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGC...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGCATCCTTCCGCCGATaGCCTGGCGCCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPASFRR*PGASSW Trigger: CCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGC...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGACTCCCGATCCCAGGGTaGGAGCACTTCGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGLPIPG*EHFVPV Trigger: GACTGGAACGAAGTGCTCCCACCCTGGGATCGGGAG...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCGGCCGAATGTAGTTTaGGAAGGGGTGATAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTERPNVV*EGVIGP Trigger: GGGCCCTATCACCCCTTCCCAAACTACATTCGGCCG...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR TCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGGAGCCGCCCAGGAATaGGCCCTCGAGCCGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTGAAQE*ALEPAH Trigger: GTGCGCCGGCTCGAGGGCTCATTCCTGGGCGGCTCC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGGTCAGCAGAGCTTCTaGTGCTTCTTCGGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDGQQSF*CFFGCS Trigger: GGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAACTCGGGTCAGCGTGTaGGTGCGGGTTTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGTRVSV*VRVSVS Trigger: AGAGACTGAAACCCGCACGCACACGCTGACCCGAGT...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGTGCCGGGCTCCGCCCTaGAACAGATACTGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQCRAPP*NRYWSS Trigger: GCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCA...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGCTGACCACATCGTCTaGTGGCAGGTGGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDADHIV*WQVEFG Trigger: ACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGCTGCTCCCAACCCCTaGATCAGTAGAAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEAAPNP*ISRRKQ Trigger: CTGCTTCCTTCTACTGATCCAGGGGTTGGGAGCAGC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGATCCGGAACGCGCGCCTaGAACTCTCCCCAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLQTPGKSDRSGADRTRSGTRA*NSPQEA Trigger: CGCTTCCTGGGGAGAGTTCCAGGCGCGCGTTCCGGA...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACGACCACATCGTCTGCTaGCAGGTGGAGTTTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDDHIVC*QVEFGG Trigger: TCCACCAAACTCCACCTGCCAGCAGACGATGTGGTC...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGCAGAAGAGGACGGATaGCGGCAACGTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEAEEDG*RQREGF Trigger: AAAACCTTCACGTTGCCGGCATCCGTCCTCTTCTGC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCTACCTGCCCATTATaGTCAGAGCTGAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGATCPL*SELRGG Trigger: TCCTCCCCTCAGCTCTGAGCATAATGGGCAGGTAGC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGTCAGCAGAGCTTCTaGTGCTTCTTCGGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGGQQSF*CFFGCS Trigger: GGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGAGACTATCGATCGTCTaGGGATCCATCTCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPGRMQTLRGRRSDTERLSIV*GSISSS Trigger: CGACGAGGAGATGGATCCGCAGACGATCGATAGTCT...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR GCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCGGGAGGTGGGGGCTaGGGAGAGCGGACATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTAGGGG*GERTWV Trigger: GACCCATGTCCGCTCTCCGCAGCCCCCACCTCCCGC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCCCCTGGCGCCTCCTCCTaGGAGCGTTTGTCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEVGKFTAIWRRGEAPGAPGASS*ERLSSA Trigger: AGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGG...GGCCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCTTCCGCCGATGGCCTaGCGCCTCCTCCTGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGLPPMA*RLLLGA Trigger: CGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAG...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACTCGTCTGCTGGCAGGTaGAGTTTGGTGGACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDSSAGR*SLVDSS Trigger: TGAACTGTCCACCAAACTCCACCTGCCAGCAGACGA...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGCTCCCGATCCCAGGGTaGGAGCACTTCGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQLPIPG*EHFVPV Trigger: GACTGGAACGAAGTGCTCCCACCCTGGGATCGGGAG...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| 3UTR CAA 72 bp | ACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTaGTGTGTTCTAGACTGCAGACCCCAGGGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRLGWPRDCLRV*CVLDCRPQGSL Trigger: CAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGGCTATGGGTCTGACTaGGCACGGACTCGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPGYGSD*ARTRSA Trigger: TGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCC...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTTCTTGCGCCGCGGCCTaGCGGGTGGCCTCCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAPRLGDRHFTRLNRTAFSCAAA*RVASAC Trigger: ACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGA...AAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGGAGGATGCGGGCGGCTaGAGTGTCCGCGGCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGEDAGG*SVRGRM Trigger: CATTCGGCCGCGGACACTGCAGCCGCCCGCATCCTC...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCGCCACACGCGCTCTaGCCCGGGGCTCTCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTAPHAL*PGALQI Trigger: AATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCCCCTGCAACAGATACTaGAGCAGCAGGTCGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPPCNRY*SSRSEA Trigger: CGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGG...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGCGGCCGAATGTAGTTTaGGAAGGGGTGATAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQRPNVV*EGVIGP Trigger: GGGCCCTATCACCCCTTCCCAAACTACATTCGGCCG...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| 3UTR CAA 72 bp | GCACAAACCACACACCCGCCTGGGCTGGCCCCGGGATaGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AQTTHPPGLAPG*PASFVCSRLQT Trigger: GGTCTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCATTATGCTCAGAGCTaGGGGGAGGAGGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDHYAQS*GEEEKH Trigger: ATGTTTTTCCTCCTCCCCTCAGCTCTGAGCATAATG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGGGAGGCTATGGGTCTaGCTGCGCACGGACTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTGRLWV*LRTDSV Trigger: GACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGATGGTGGACAGTTCAATaGGACTATCGATCGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGWWTVQ*DYRSSA Trigger: CGCAGACGATCGATAGTCTCATTGAACTGTCCACCA...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGGCTACCTGCCCATTATaGTCAGAGCTGAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQATCPL*SELRGG Trigger: TCCTCCCCTCAGCTCTGAGCATAATGGGCAGGTAGC...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGCGGGTTTCAGTCTCTaGTGCCGCCGTCTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPAGFSL*CRRLLL Trigger: CAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGC...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGAAGCAGGCGCTCTCCTaGCTCGGAGCCGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGKQALS*LGAAQE Trigger: TTCCTGGGCGGCTCCGAGGCAGGAGAGCGCCTGCTT...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGCTGACCACATCGTCTaGTGGCAGGTGGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCADHIV*WQVEFG Trigger: ACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGC...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTAGCTCCTCCTGCTCCTaGAGCCGGCGCTCCTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GAPRLGDRHFTRLNRTAFSSSCS*SRRSSA Trigger: CGCGGAGGAGCGCCGGCTGCAGGAGCAGGAGGAGCT...AAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGGCTGCTCCCAACCCCTaGATCAGTAGAAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQAAPNP*ISRRKQ Trigger: CTGCTTCCTTCTACTGATCCAGGGGTTGGGAGCAGC...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCGGGGATCCACGCCCTaGAAGAGCTCTCCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGRGSTP*KSSPWS Trigger: GGACCAGGGAGAGCTCTTCCAGGGCGTGGATCCCCG...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGACGGCCGAATGTAGTTTaGGAAGGGGTGATAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLQTPGKSDRSGADRTRRPNVV*EGVIGP Trigger: GGGCCCTATCACCCCTTCCCAAACTACATTCGGCCG...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAGGCTATGGGTCTGACTaGGCACGGACTCGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRGYGSD*ARTRSA Trigger: TGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCC...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTAACAGGAGTGCGTTCTaGCGCGCCCTCTCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLCVLDCRPQGSLTGNRSAF*RALSAS Trigger: GGAGGCGGAGAGGGCGCGGCAGAACGCACTCCTGTT...ACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAAAATCTCGAAGTTCTTaGAGCAAGGATGCTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAHANTEREEERHGKSRSS*SKDASA Trigger: GGCGCTAGCATCCTTGCTCCAAGAACTTCGAGATTT...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | CCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGTGGTGGACAGTTCAATaGGACTATCGATCGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPGLAPGLPASFVCSRLQWWTVQ*DYRSSA Trigger: CGCAGACGATCGATAGTCTCATTGAACTGTCCACCA...CTGCAGTCTAGAACACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGAGCAGAAGAGGACGGATaGCGGCAACGTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRLQTPGKSDRSGADRTRAEEDG*RQREGF Trigger: AAAACCTTCACGTTGCCGGCATCCGTCCTCTTCTGC...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGGGTCAGCGTGTGCGTaGGGGTTTCAGTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTGSACA*GFQSLL Trigger: CAGCAGAGACTGAAACCCGCACGCACACGCTGACCC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACTCGGGTCAGCGTGTaGGTGCGGGTTTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRTRVSV*VRVSVS Trigger: AGAGACTGAAACCCGCACGCACACGCTGACCCGAGT...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCAGACTATCGATCGTCTaGGGATCCATCTCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPRLSIV*GSISSS Trigger: CGACGAGGAGATGGATCCGCAGACGATCGATAGTCT...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACACCCTGCAACAGATACTaGAGCAGCAGGTCGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTPCNRY*SSRSEA Trigger: CGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGG...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCTCCCGATCCCAGGGTaGGAGCACTTCGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGLPIPG*EHFVPV Trigger: GACTGGAACGAAGTGCTCCCACCCTGGGATCGGGAG...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTGCCTCCAGATCCGGATaGTGGCGCGCAGGTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAPRLGDRHFTRLNRTAFASRSG*WRAGGN Trigger: GTTGCCACCTGCGCGCCACCATCCGGATCTGGAGGC...AAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCGGGTTTCAGTCTCTaGTGCCGCCGTCTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTAGFSL*CRRLLL Trigger: CAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGGTCAGCAGAGCTTCTaGTGCTTCTTCGGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APGAPRLGDRHFTRLNRTGQQSF*CFFGCS Trigger: GGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACC...TGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAAGACTATCGATCGTCTaGGGATCCATCTCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRRLSIV*GSISSS Trigger: CGACGAGGAGATGGATCCGCAGACGATCGATAGTCT...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGGCTGACCACATCGTCTaGTGGCAGGTGGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGADHIV*WQVEFG Trigger: ACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGC...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCCCATTATGCTCAGAGCTaGGGGGAGGAGGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GEVGKFTAIWRRGEAPGAHYAQS*GEEEKH Trigger: ATGTTTTTCCTCCTCCCCTCAGCTCTGAGCATAATG...GGCCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGTCGTCTGCTGGCAGGTaGAGTTTGGTGGACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGSSAGR*SLVDSS Trigger: TGAACTGTCCACCAAACTCCACCTGCCAGCAGACGA...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGTGGTGGACAGTTCAATaGGACTATCGATCGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVSSQQFGEEGRLRGWWTVQ*DYRSSA Trigger: CGCAGACGATCGATAGTCTCATTGAACTGTCCACCA...CCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTGCAGAAGAGGACGGATaGCGGCAACGTGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAPRLGDRHFTRLNRTAFAEEDG*RQREGF Trigger: AAAACCTTCACGTTGCCGGCATCCGTCCTCTTCTGC...AAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTGGGACCACATCGTCTGCTaGCAGGTGGAGTTTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLGDRHFTRLNRTAFPVWDHIVC*QVEFGG Trigger: TCCACCAAACTCCACCTGCCAGCAGACGATGTGGTC...CCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAATGCGCGCGCCTGGCCTaGGCCTCCAGATCCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSKTISSVRGIYNREGECARLA*ASRSGW Trigger: CCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCGCA...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTAAATCTCGAAGTTCTTaGAGCAAGGATGCTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLRVLCVLDCRPQGSLTGKSRSS*SKDASA Trigger: GGCGCTAGCATCCTTGCTCCAAGAACTTCGAGATTT...ACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAACGGGGCTCTCCAGATTaGCTCGGGTCAGCGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLSKTISSVRGIYNREGERGSPD*LGSACA Trigger: CGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCG...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAAAACAGGAGTGCGTTCTaGCGCGCCCTCTCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSKTISSVRGIYNREGENRSAF*RALSAS Trigger: GGAGGCGGAGAGGGCGCGGCAGAACGCACTCCTGTT...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAAGCCTCCAGATCCGGATaGTGGCGCGCAGGTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSKTISSVRGIYNREGEASRSG*WRAGGN Trigger: GTTGCCACCTGCGCGCCACCATCCGGATCTGGAGGC...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTTAGCAAAACTATTTCCTCCGTGAGGGGTATTTACAACAGAGAAGGAGAACATTATGCTCAGAGCTaGGGGGAGGAGGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSKTISSVRGIYNREGEHYAQS*GEEEKH Trigger: ATGTTTTTCCTCCTCCCCTCAGCTCTGAGCATAATG...TTCTCCTTCTCTGTTGTAAATACCCCTCACGGAGGAAATAGTTTTGCTAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | GAAGGGACCGGGGGCGGAAGAGGAGCGCGCTCCGGAACGCGCGCCTaGAACTCTCCCCAGGAAGCGCGCCACACGCGCTCTGGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGTGGGRGARSGTRA*NSPQEARHTRSGPG Trigger: CCCCGGGCCAGAGCGCGTGTGGCGCGCTTCCTGGGGAGAGTTCCAGGCGCGCGTTCCGGAGCGCGCTCCTCTTCCGCCCCCGGTCCCTTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CTGGGAACCTCCCGGGACCGACGGGGGCGAGGCCGGACGGTCCAGTaGCTGCAACAGTACCGAGGCCAGCGCCCGGGGATCCACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTSRDRRGRGRTVQ*LQQYRGQRPGIHAL Trigger: CAGGGCGTGGATCCCCGGGCGCTGGCCTCGGTACTGTTGCAGGCACTGGACCGTCCGGCCTCGCCCCCGTCGGTCCCGGGAGGTTCCCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | CGCGCGCCTGGCCTGGGCCTCCAGATCCGGATGGTGGCGCGCAGGTaGCAACGCGTGATGGAAGTGACGGCGGCGGGAGGATGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPGLGLQIRMVARR*QRVMEVTAAGGCGR Trigger: CCGCCCGCATCCTCCCGCCGCCGTCACTTCCATCACGCGTTGCCACCTGCGCGCCACCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | GAACCTCCCGGGACCGACGGGGGCGAGGCCGGACGGTCCAGTGCCTaGAACAGTACCGAGGCCAGCGCCCGGGGATCCACGCCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EPPGTDGGEAGRSSA*NSTEASARGSTPWK Trigger: CTTCCAGGGCGTGGATCCCCGGGCGCTGGCCTCGGTACTGTTGCAGGCACTGGACCGTCCGGCCTCGCCCCCGTCGGTCCCGGGAGGTTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | TACTGGAGCAGCAGGTCGGAGGCGAGATCGGCCAGCCGCTCTTCTTaGGCCGCGGCCTGCCGGGTGGCCTCCGCCTGTCTCCTCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YWSSRSEARSASRSS*AAACRVASACLLPA Trigger: GGCAGGGAGGAGACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCCGATCTCGCCTCCGACCTGCTGCTCCAGTA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CTCGGCGAACAGGAGTGCGTTCTGCCGCGCCCTCTCCGCCTCCTCTaGCTCCGCCTCCGCCTCCGCCGCCTCCTCATCCTCTTCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGEQECVLPRPLRLL*LRLRLRRLLILFPH Trigger: GTGGGGGAAGAGGATGAGGAGGCGGCGGAGGCGGAGGCGGAGGCAGAGGAGGCGGAGAGGGCGCGGCAGAACGCACTCCTGTTCGCCGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGGGCCAGCCGCTCTTCTaGCGCCGCGGCCTGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAEPGRMQTLRGRRSDTEGQPLF*RRGLPG Trigger: ACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCC...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 90 bp | TCCTCCTCCCCGCCCTCCTCTGCCCCCTCAGCATCCTTCCGCCGATaGCCTGGCGCCTCCTCCTGGGAGCGTTTGTCCTCGGCTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSPPSSAPSASFRR*PGASSWERLSSAPA Trigger: AGCCGGAGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGCTGAGGGGGCAGAGGAGGGCGGGGAGGAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | TCCTGCAGCTCGCGACCCCCGAGATCGCGCTGCCGGGCTCCGCCCTaGAACAGATACTGGAGCAGCAGGTCGGAGGCGAGATCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSSRPPRSRCRAPP*NRYWSSRSEARSAS Trigger: GCTGGCCGATCTCGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 90 bp | CGCCTCTCCTGCTCTGCCTCCTCCTCCCTCTCGTTCTCCCGCTCTTaGTGCGTCTCCTGCAGCTCGCGACCCCCGAGATCGCGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSCSASSSLSFSRS*CVSCSSRPPRSRCR Trigger: CCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAGAGGGAGGAGGAGGCAGAGCAGGAGAGGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | AACGCGCGCCTGGAACTCTCCCCAGGAAGCGCGCCACACGCGCTCTaGCCCGGGGCTCTCCAGATTGACTCGGGTCAGCGTGTGCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NARLELSPGSAPHAL*PGALQIDSGQRVRA Trigger: CGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCGCTTCCTGGGGAGAGTTCCAGGCGCGCGTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS TCA 90 bp | GCCAGCGCCCGGGGATCCACGCCCTGGAAGAGCTCTCCCTGGTCCTaGGGCTCGGGATTCCGAGCAGCTCGGACCTCTGGTACGCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASARGSTPWKSSPWS*GSGFRAARTSGTPS Trigger: TGACGGCGTACCAGAGGTCCGAGCTGCTCGGAATCCCGAGCCTCAGGACCAGGGAGAGCTCTTCCAGGGCGTGGATCCCCGGGCGCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS TCA 90 bp | CCCAGGAAGCGCGCCACACGCGCTCTGGCCCGGGGCTCTCCAGATTaGCTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTCTCTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PRKRATRALARGSPD*LGSACACGFQSLLP Trigger: CGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCGCTTCCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | ACGGACTCGGTCAGCAGAGCTTCTGCTGCTTCTTCGGGTGTTCCCTaGTGGGAACCTCCCGGGACCGACGGGGGCGAGGCCGGACGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDSVSRASAASSGVP*WEPPGTDGGEAGRS Trigger: GGACCGTCCGGCCTCGCCCCCGTCGGTCCCGGGAGGTTCCCAGCAGGGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS GCA 90 bp | CGCTCTTGCTGCGTCTCCTGCAGCTCGCGACCCCCGAGATCGCGCTaGCGGGCTCCGCCCTGCAACAGATACTGGAGCAGCAGGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSCCVSCSSRPPRSR*RAPPCNRYWSSRSE Trigger: CTCCGACCTGCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCAGCAAGAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CTCTCCTGCTCTGCCTCCTCCTCCCTCTCGTTCTCCCGCTCTTGCTaGGTCTCCTGCAGCTCGCGACCCCCGAGATCGCGCTGCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCSASSSLSFSRSC*VSCSSRPPRSRCRA Trigger: AGCCCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAGAGGGAGGAGGAGGCAGAGCAGGAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | GCGCGCAGGTGGCAACGCGTGATGGAAGTGACGGCGGCGGGAGGATaGGGGCGGCTGCAGTGTCCGCGGCCGAATGTAGTTTGGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARRWQRVMEVTAAGG*GRLQCPRPNVVWEG Trigger: CCCTTCCCAAACTACATTCGGCCGCGGACACTGCAGCCGCCCGCATCCTCCCGCCGCCGTCACTTCCATCACGCGTTGCCACCTGCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | CGACCCCCGAGATCGCGCTGCCGGGCTCCGCCCTGCAACAGATACTaGAGCAGCAGGTCGGAGGCGAGATCGGCCAGCCGCTCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPRSRCRAPPCNRY*SSRSEARSASRSSC Trigger: GCAAGAAGAGCGGCTGGCCGATCTCGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCTCGGGGGTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 90 bp | GACTCGGTCAGCAGAGCTTCTGCTGCTTCTTCGGGTGTTCCCTGCTaGGAACCTCCCGGGACCGACGGGGGCGAGGCCGGACGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSVSRASAASSGVPC*EPPGTDGGEAGRSS Trigger: ACTGGACCGTCCGGCCTCGCCCCCGTCGGTCCCGGGAGGTTCCCAGCAGGGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS CCA 90 bp | AGGCGAGATCGGCCAGCCGCTCTTCTTGCGCCGCGGCCTGCCGGGTaGCCTCCGCCTGTCTCCTCCCTGCCTCTACCTGAGCTAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRDRPAALLAPRPAG*PPPVSSLPLPELIL Trigger: AAGGATTAGCTCAGGTAGAGGCAGGGAGGAGACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCCGATCTCGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCCGGGGCTCTCCAGATaGACTCGGGTCAGCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDPGLSR*TRVSVC Trigger: GCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | GTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGGCCAGCCGCTCTTCTaGCGCCGCGGCCTGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLDCRPQGSLTGPVPTEPGQPLF*RRGLPG Trigger: ACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCC...GGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | ACGCGCTCTGGCCCGGGGCTCTCCAGATTGACTCGGGTCAGCGTGTaGGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCTTGTTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSGPGLSRLTRVSV*VRVSVSAAAVSCWR Trigger: GCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGACATTCGAGCCTGGAATaGGGAAGGGACCGGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGGARAHANTEREEERHGHSSLE*GRDRGR Trigger: CCGCCCCCGGTCCCTTCCCAATTCCAGGCTCGAATG...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | AGCCGAGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACCTCGTTCTCCCGCTCTaGCTGCGTCTCCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGAEPGRMQTLRGRRSDLVLPL*LRLLQL Trigger: GAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAG...GTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCTCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGATCCTCCTGGGAGCGTTaGTCCTCGGCTCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGARAHANTEREEERHGSSWER*SSAPAS Trigger: GGAAGCCGGAGCCGAGGACAAACGCTCCCAGGAGGA...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | GGGGACTCGCACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGATGCTGCCGCCGTCTCTaGTTGGCGCTTAGCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDSHKPHTRLGWPRDCLRCCRRL*LALSIA Trigger: AGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCA...TCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTGCGAGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGACTCGTTCTCCCGCTCTaGCTGCGTCTCCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGGARAHANTEREEERHGLVLPL*LRLLQL Trigger: GAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAG...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 90 bp | GCTATGGGTCTGACTGCGCACGGACTCGGTCAGCAGAGCTTCTGCTaGTTCTTCGGGTGTTCCCTGCTGGGAACCTCCCGGGACCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: AMGLTAHGLGQQSFC*FFGCSLLGTSRDRR Trigger: CCGTCGGTCCCGGGAGGTTCCCAGCAGGGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | GGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGTGCTGCCGCCGTCTCTaGTTGGCGCTTAGCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAEPGRMQTLRGRRSDTECCRRL*LALSIA Trigger: AGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCA...CTCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | CACAAACCACACACCCGCCTGGGCTGGCCCCGGGATTGCCTGCGAGTTTTGTGTTCCTCCTGGGAGCGTTaGTCCTCGGCTCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HKPHTRLGWPRDCLRVLCSSWER*SSAPAS Trigger: GGAAGCCGGAGCCGAGGACAAACGCTCCCAGGAGGA...ACACAAAACTCGCAGGCAATCCCGGGGCCAGCCCAGGCGGGTGTGTGGTTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCGGCCGAATGTAGTTaGGGAAGGGGTGATAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGARAHANTEREEERHGAAECS*GRGDRA Trigger: GGCCCTATCACCCCTTCCCAAACTACATTCGGCCGC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS TCA 90 bp | GCCACAGCGGGCGCTTGGATTTCTGGTGCCGGGAGGCTATGGGTCTaGCTGCGCACGGACTCGGTCAGCAGAGCTTCTGCTGCTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ATAGAWISGAGRLWV*LRTDSVSRASAASS Trigger: CGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCCGGCACCAGAAATCCAAGCGCCCGCTGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS GCA 90 bp | GAGGCTATGGGTCTGACTGCGCACGGACTCGGTCAGCAGAGCTTCTaGTGCTTCTTCGGGTGTTCCCTGCTGGGAACCTCCCGGGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: EAMGLTAHGLGQQSF*CFFGCSLLGTSRDR Trigger: TCGGTCCCGGGAGGTTCCCAGCAGGGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS GCA 90 bp | CAGCGGGCGCTTGGATTTCTGGTGCCGGGAGGCTATGGGTCTGACTaGGCACGGACTCGGTCAGCAGAGCTTCTGCTGCTTCTTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRALGFLVPGGYGSD*ARTRSAELLLLLRV Trigger: CACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCCGGCACCAGAAATCCAAGCGCCCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS-3UTR CAA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGATCCTCCTGGGAGCGTTaGTCCTCGGCTCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLQTPGKSDRSGADRTRSSWER*SSAPAS Trigger: GGAAGCCGGAGCCGAGGACAAACGCTCCCAGGAGGA...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | AGCAGCTCGGACCTCTGGTACGCCGTCATCCTTTGGCCGGGACACTaGGTCCTCAGCTACCTGCCCATTATGCTCAGAGCTGAGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSDLWYAVILWPGH*VLSYLPIMLRAEGR Trigger: CCTCCCCTCAGCTCTGAGCATAATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTGGCCAGCCGCTCTTCTaGCGCCGCGGCCTGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAPRLGDRHFTRLNRTAFGQPLF*RRGLPG Trigger: ACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCC...AAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | CTCGGGATTCCGAGCAGCTCGGACCTCTGGTACGCCGTCATCCTTTaGCCGGGACACTGCGTCCTCAGCTACCTGCCCATTATGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGIPSSSDLWYAVIL*PGHCVLSYLPIMLR Trigger: TCTGAGCATAATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCTCGGAATCCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGGAGCCAGGGCGCATGCAAACACTGAGAGGGAGGAGGAGCGACACGGAGCTGGCAGGTGGAGTTaGGTGGACAGTTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGGARAHANTEREEERHGAGRWS*VDSSMR Trigger: TCTCATTGAACTGTCCACCAAACTCCACCTGCCAGC...TCCGTGTCGCTCCTCCTCCCTCTCAGTGTTTGCATGCGCCCTGGCTCCGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | TCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGTGCCGACAGAACCCGAGCGGCCGAATGTAGTTaGGGAAGGGGTGATAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLQTPGKSDRSGADRTRAAECS*GRGDRA Trigger: GGCCCTATCACCCCTTCCCAAACTACATTCGGCCGC...TCGGGTTCTGTCGGCACCGGACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CTCCAGATTGACTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTCTCTaGTGCCGCCGTCTCTTGTTGGCGCTTAGCATTGCTCGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQIDSGQRVRAGFSL*CRRLLLALSIARTE Trigger: TTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCGAGTTTTGTGTGTTCTAGACTGCAGACCCCAGGGAAGTCTGACAGGTCCGGGGCTCTCCAGATaGACTCGGGTCAGCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLRVLCVLDCRPQGSLTGPGLSR*TRVSVC Trigger: GCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGG...ACCTGTCAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAGCGGCCGAATGTAGTTaGGGAAGGGGTGATAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRAAECS*GRGDRA Trigger: GGCCCTATCACCCCTTCCCAAACTACATTCGGCCGC...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CAGATTGACTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTCTCTGCTaGCGCCGTCTCTTGTTGGCGCTTAGCATTGCTCGGACTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: QIDSGQRVRAGFSLC*RRLLLALSIARTEI Trigger: GATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | AGCGTGTGCGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCTTGTTaGCGCTTAGCATTGCTCGGACTGAAATCTCGAAGTTCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVCVRVSVSAAAVSC*RLALLGLKSRSSWS Trigger: GCTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTGGCCGGGGCTCTCCAGATaGACTCGGGTCAGCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLGDRHFTRLNRTAFPVWPGLSR*TRVSVC Trigger: GCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGG...CCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGGAGACAGACACTTCACACGATTAAATAGAACAGCCTTTCCCGTCTGGCATTCGAGCCTGGAATaGGGAAGGGACCGGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGDRHFTRLNRTAFPVWHSSLE*GRDRGR Trigger: CCGCCCCCGGTCCCTTCCCAATTCCAGGCTCGAATG...CCAGACGGGAAAGGCTGTTCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGTGGGTAAGTTCACAGCAATTTGGAGAAGAGGGGAGGCTCCGGGGGCCGCTGGCAGGTGGAGTTaGGTGGACAGTTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GEVGKFTAIWRRGEAPGAAGRWS*VDSSMR Trigger: TCTCATTGAACTGTCCACCAAACTCCACCTGCCAGC...GGCCCCCGGAGCCTCCCCTCTTCTCCAAATTGCTGTGAACTTACCCACTTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS-3UTR CAA 90 bp | GAGGCTCCGGGGGCCCCAAGGCTGGGAGACAGACACTTCACACGATTAAATAGAGCTGGCAGGTGGAGTTaGGTGGACAGTTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAPGAPRLGDRHFTRLNRAGRWS*VDSSMR Trigger: TCTCATTGAACTGTCCACCAAACTCCACCTGCCAGC...TCTATTTAATCGTGTGAAGTGTCTGTCTCCCAGCCTTGGGGCCCCCGGAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041543.9 ENSMUST00000190827.7 |
||
| CDS TCA 90 bp | GAGCCCTCGAGCCGGCGCACCTTAGGGAAGGGGCCACCTAGACTTTaGTACGCCTTGGATAAGGGTGTCAAAGTCTCACCTAAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPSSRRTLGKGPPRL*YALDKGVKVSPKCV Trigger: AACACATTTAGGTGAGACTTTGACACCCTTATCCAAGGCGTATCAAAGTCTAGGTGGCCCCTTCCCTAAGGTGCGCCGGCTCGAGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | TCTTGTTGGCGCTTAGCATTGCTCGGACTGAAATCTCGAAGTTCTTaGAGCAAGGATGCTAGCGCCTCCAGCTCTTCTGAGCGGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCWRLALLGLKSRSS*SKDASASSSSERSS Trigger: GGACGACCGCTCAGAAGAGCTGGAGGCGCTAGCATCCTTGCTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | TCCTCCACCTCTTCGATGATGCTGACCACATCGTCTGCTGGCAGGTaGAGTTTGGTGGACAGTTCAATGAGACTATCGATCGTCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSSMMLTTSSAGR*SLVDSSMRLSIVCG Trigger: TCCGCAGACGATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 90 bp | CCGTTTCTCCTCCACCTCTTCGATGATGCTGACCACATCGTCTGCTaGCAGGTGGAGTTTGGTGGACAGTTCAATGAGACTATCGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: PFLLHLFDDADHIVC*QVEFGGQFNETIDR Trigger: ACGATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGTGGAGGAGAAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 90 bp | CTTCCGTTTCTCCTCCACCTCTTCGATGATGCTGACCACATCGTCTaGTGGCAGGTGGAGTTTGGTGGACAGTTCAATGAGACTATCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPFLLHLFDDADHIV*WQVEFGGQFNETID Trigger: ATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGTGGAGGAGAAACGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | GGGACCGACGGGGGCGAGGCCGGACGGTCCAGTGCCTaGAACAGTACCGAGGCCAGCGCCCGGGGATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GTDGGEAGRSSA*NSTEASARGST Trigger: CGTGGATCCCCGGGCGCTGGCCTCGGTACTGTTGCAGGCACTGGACCGTCCGGCCTCGCCCCCGTCGGTCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | TCCCGGGACCGACGGGGGCGAGGCCGGACGGTCCAGTaGCTGCAACAGTACCGAGGCCAGCGCCCGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SRDRRGRGRTVQ*LQQYRGQRPGI Trigger: GATCCCCGGGCGCTGGCCTCGGTACTGTTGCAGGCACTGGACCGTCCGGCCTCGCCCCCGTCGGTCCCGGGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | TCCTGCAGCCGGCGCTCCTCCGCGTCCGCTTCCTCCTaGGCGCGCCTGGCCTGGGCCTCCAGATCCGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSRRSSASASS*ARLAWASRSGW Trigger: CCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCGCAGGAGGAAGCGGACGCGGAGGAGCGCCGGCTGCAGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | TCCTCCGCGTCCGCTTCCTCCTGCGCGCGCCTGGCCTaGGCCTCCAGATCCGGATGGTGGCGCGCAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSASASSCARLA*ASRSGWWRAGG Trigger: GCCACCTGCGCGCCACCATCCGGATCTGGAGGCCCAGGCCAGGCGCGCGCAGGAGGAAGCGGACGCGGAGGA 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | AGCAGGTCGGAGGCGAGATCGGCCAGCCGCTCTTCTTaGGCCGCGGCCTGCCGGGTGGCCTCCGCCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSEARSASRSS*AAACRVASACL Trigger: GAGACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCCGATCTCGCCTCCGACCTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | GGGGGCGGAAGAGGAGCGCGCTCCGGAACGCGCGCCTaGAACTCTCCCCAGGAAGCGCGCCACACGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGGRGARSGTRA*NSPQEARHTRS Trigger: AGAGCGCGTGTGGCGCGCTTCCTGGGGAGAGTTCCAGGCGCGCGTTCCGGAGCGCGCTCCTCTTCCGCCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CAA 72 bp | CAGCAGGTCGGAGGCGAGATCGGCCAGCCGCTCTTCTaGCGCCGCGGCCTGCCGGGTGGCCTCCGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QQVGGEIGQPLF*RRGLPGGLRLS Trigger: AGACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCCGATCTCGCCTCCGACCTGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CAA 90 bp | ATACTGGAGCAGCAGGTCGGAGGCGAGATCGGCCAGCCGCTCTTCTaGCGCCGCGGCCTGCCGGGTGGCCTCCGCCTGTCTCCTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILEQQVGGEIGQPLF*RRGLPGGLRLSPPC Trigger: GCAGGGAGGAGACAGGCGGAGGCCACCCGGCAGGCCGCGGCGCAAGAAGAGCGGCTGGCCGATCTCGCCTCCGACCTGCTGCTCCAGTAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS TCA 72 bp | AAGCAGGCGCTCTCCTGCCTCGGAGCCGCCCAGGAATaGGCCCTCGAGCCGGCGCACCTTAGGGAAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KQALSCLGAAQE*ALEPAHLREGA Trigger: GGCCCCTTCCCTAAGGTGCGCCGGCTCGAGGGCTCATTCCTGGGCGGCTCCGAGGCAGGAGAGCGCCTGCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | TCCGGCTTCCCCGTCCTCCTCCTCGGCGAACAGGAGTaGGTTCTGCCGCGCCCTCTCCGCCTCCTCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGFPVLLLGEQE*VLPRPLRLLCL Trigger: GAGGCAGAGGAGGCGGAGAGGGCGCGGCAGAACGCACTCCTGTTCGCCGAGGAGGAGGACGGGGAAGCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | GGCCTGGGCCTCCAGATCCGGATGGTGGCGCGCAGGTaGCAACGCGTGATGGAAGTGACGGCGGCGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLGLQIRMVARR*QRVMEVTAAGG Trigger: TCCTCCCGCCGCCGTCACTTCCATCACGCGTTGCCACCTGCGCGCCACCATCCGGATCTGGAGGCCCAGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | CCCCAGGAAGCGCGCCACACGCGCTCTGGCCCGGGGCTCTCCAGATaGACTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTCTCTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQEARHTRSGPGLSR*TRVSVCVRVSVSAA Trigger: GGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCGCTTCCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | TCGCCTCTCCTGCTCTGCCTCCTCCTCCCTCTCGTTCTCCCGCTCTaGCTGCGTCTCCTGCAGCTCGCGACCCCCGAGATCGCGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPLLLCLLLPLVLPL*LRLLQLATPEIALP Trigger: CGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAGAGGGAGGAGGAGGCAGAGCAGGAGAGGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | TCGCGACCCCCGAGATCGCGCTGCCGGGCTCCGCCCTaGAACAGATACTGGAGCAGCAGGTCGGAGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRPPRSRCRAPP*NRYWSSRSEAR Trigger: TCTCGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCTCGGGGGTCGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | TGCGTCTCCTGCAGCTCGCGACCCCCGAGATCGCGCTaGCGGGCTCCGCCCTGCAACAGATACTGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVSCSSRPPRSR*RAPPCNRYWSS Trigger: GCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | TCCTCCCTCTCGTTCTCCCGCTCTTGCTGCGTCTCCTaGAGCTCGCGACCCCCGAGATCGCGCTGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLSFSRSCCVS*SSRPPRSRCRA Trigger: AGCCCGGCAGCGCGATCTCGGGGGTCGCGAGCTGCAGGAGACGCAGCAAGAGCGGGAGAACGAGAGGGAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | AGATCGCGCTGCCGGGCTCCGCCCTGCAACAGATACTaGAGCAGCAGGTCGGAGGCGAGATCGGCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRCRAPPCNRY*SSRSEARSASR Trigger: GCGGCTGGCCGATCTCGCCTCCGACCTGCTGCTCCAGTATCTGTTGCAGGGCGGAGCCCGGCAGCGCGATCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | TCAGCATCCTTCCGCCGATGGCCTGGCGCCTCCTCCTaGGAGCGTTTGTCCTCGGCTCCGGCTTCCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SASFRRWPGASS*ERLSSAPASPS Trigger: GGACGGGGAAGCCGGAGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | CTCCTCTGCCCCCTCAGCATCCTTCCGCCGATGGCCTaGCGCCTCCTCCTGGGAGCGTTTGTCCTCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLCPLSILPPMA*RLLLGAFVLGS Trigger: GGAGCCGAGGACAAACGCTCCCAGGAGGAGGCGCCAGGCCATCGGCGGAAGGATGCTGAGGGGGCAGAGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 72 bp | GCGCGCCACACGCGCTCTGGCCCGGGGCTCTCCAGATaGACTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARHTRSGPGLSR*TRVSVCVRVSV Trigger: GACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS TCA 72 bp | CGCGCCACACGCGCTCTGGCCCGGGGCTCTCCAGATTaGCTCGGGTCAGCGTGTGCGTGCGGGTTTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RATRALARGSPD*LGSACACGFQS Trigger: AGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | CTGGAACTCTCCCCAGGAAGCGCGCCACACGCGCTCTaGCCCGGGGCTCTCCAGATTGACTCGGGTCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LELSPGSAPHAL*PGALQIDSGQR Trigger: ACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCCAGAGCGCGTGTGGCGCGCTTCCTGGGGAGAGTTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | GGCCCGGGGCTCTCCAGATTGACTCGGGTCAGCGTGTaGGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGLSRLTRVSV*VRVSVSAAAVS Trigger: AGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACCCGAGTCAATCTGGAGAGCCCCGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 72 bp | GGGAAGGGGAGCGCTTTCGGACATTCGAGCCTGGAATaGGGAAGGGACCGGGGGCGGAAGAGGAGCGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKGSAFGHSSLE*GRDRGRKRSAL Trigger: GAGCGCGCTCCTCTTCCGCCCCCGGTCCCTTCCCAATTCCAGGCTCGAATGTCCGAAAGCGCTCCCCTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | GTCCTGAGGCTCGGGATTCCGAGCAGCTCGGACCTCTaGTACGCCGTCATCCTTTGGCCGGGACACTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLRLGIPSSSDL*YAVILWPGHCV Trigger: GACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCTCGGAATCCCGAGCCTCAGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | CTGACTGCGCACGGACTCGGTCAGCAGAGCTTCTGCTaGTTCTTCGGGTGTTCCCTGCTGGGAACCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LTAHGLGQQSFC*FFGCSLLGTSR Trigger: CCGGGAGGTTCCCAGCAGGGAACACCCGAAGAAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | CCGAGCAGCTCGGACCTCTGGTACGCCGTCATCCTTTaGCCGGGACACTGCGTCCTCAGCTACCTGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: PSSSDLWYAVIL*PGHCVLSYLPI Trigger: AATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | GTTTCGGGAAGGGGAGCGCTTTCGGACATTCGAGCCTaGAATTGGGAAGGGACCGGGGGCGGAAGAGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VSGRGALSDIRA*NWEGTGGGRGA Trigger: CGCTCCTCTTCCGCCCCCGGTCCCTTCCCAATTCCAGGCTCGAATGTCCGAAAGCGCTCCCCTTCCCGAAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CCA 72 bp | CGGGGGAAACACCTCATCCTCCTCCCGATCCCAGGGTaGGAGCACTTCGTTCCAGTCCGGCAACTCATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGKHLILLPIPG*EHFVPVRQLIP Trigger: CGGGATGAGTTGCCGGACTGGAACGAAGTGCTCCCACCCTGGGATCGGGAGGAGGATGAGGTGTTTCCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
||
| CDS CAA 72 bp | TCCGAGCAGCTCGGACCTCTGGTACGCCGTCATCCTTaGGCCGGGACACTGCGTCCTCAGCTACCTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SEQLGPLVRRHP*AGTLRPQLPAH Trigger: ATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCTCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS CAA 90 bp | GCTCGGGATTCCGAGCAGCTCGGACCTCTGGTACGCCGTCATCCTTaGGCCGGGACACTGCGTCCTCAGCTACCTGCCCATTATGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARDSEQLGPLVRRHP*AGTLRPQLPAHYAQ Trigger: CTGAGCATAATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTCCGAGCTGCTCGGAATCCCGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS TCA 72 bp | GGCGCTTGGATTTCTGGTGCCGGGAGGCTATGGGTCTaGCTGCGCACGGACTCGGTCAGCAGAGCTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAWISGAGRLWV*LRTDSVSRASA Trigger: AGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCCGGCACCAGAAATCCAAGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | GGCCGGGACACTGCGTCCTCAGCTACCTGCCCATTATaGTCAGAGCTGAGGGGAGGAGGAAAAACATCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRDTASSATCPL*SELRGGGKTSG Trigger: CCCCGATGTTTTTCCTCCTCCCCTCAGCTCTGAGCATAATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | GACCTCTGGTACGCCGTCATCCTTTGGCCGGGACACTaGGTCCTCAGCTACCTGCCCATTATGCTCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DLWYAVILWPGH*VLSYLPIMLRA Trigger: AGCTCTGAGCATAATGGGCAGGTAGCTGAGGACGCAGTGTCCCGGCCAAAGGATGACGGCGTACCAGAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
||
| CDS GCA 72 bp | CTTGGATTTCTGGTGCCGGGAGGCTATGGGTCTGACTaGGCACGGACTCGGTCAGCAGAGCTTCTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LGFLVPGGYGSD*ARTRSAELLLL Trigger: AAGCAGCAGAAGCTCTGCTGACCGAGTCCGTGCGCAGTCAGACCCATAGCCTCCCGGCACCAGAAATCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000187382.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | CAGCGTGTGCGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCTTGTaGGCGCTTAGCATTGCTCGGACTGAAATCTCGAAGTTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: QRVRAGFSLCCRRLL*ALSIARTEISKFLE Trigger: CTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | GGTCAGCGTGTGCGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCTaGTTGGCGCTTAGCATTGCTCGGACTGAAATCTCGAAGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GQRVRAGFSLCCRRL*LALSIARTEISKFL Trigger: CAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACGCACACGCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 72 bp | CGTGCGGGTTTCAGTCTCTGCTGCCGCCGTCTCTTGTaGGCGCTTAGCATTGCTCGGACTGAAATCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RAGFSLCCRRLL*ALSIARTEISK Trigger: CTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS TCA 72 bp | AGCCGGCGCACCTTAGGGAAGGGGCCACCTAGACTTTaGTACGCCTTGGATAAGGGTGTCAAAGTCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: SRRTLGKGPPRL*YALDKGVKVSP Trigger: AGGTGAGACTTTGACACCCTTATCCAAGGCGTATCAAAGTCTAGGTGGCCCCTTCCCTAAGGTGCGCCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | CGGGTTTCAGTCTCTGCTGCCGCCGTCTCTTGTTGGCGCTTAGCATaGCTCGGACTGAAATCTCGAAGTTCTTGGAGCAAGGATGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RVSVSAAAVSCWRLA*LGLKSRSSWSKDAS Trigger: GCTAGCATCCTTGCTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGACTGAAACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS TCA 72 bp | CGTCTGCTGGCAGGTGGAGTTTGGTGGACAGTTCAATaGGACTATCGATCGTCTGCGGATCCATCTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RLLAGGVWWTVQ*DYRSSADPSPR Trigger: ACGAGGAGATGGATCCGCAGACGATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS GCA 72 bp | CTCCTCCACCTCTTCGATGATGCTGACCACATCGTCTaGTGGCAGGTGGAGTTTGGTGGACAGTTCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LLHLFDDADHIV*WQVEFGGQFNE Trigger: CTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 72 bp | GTCTCTGCTGCCGCCGTCTCTTGTTGGCGCTTAGCATaGCTCGGACTGAAATCTCGAAGTTCTTGGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VSAAAVSCWRLA*LGLKSRSSWSK Trigger: CTTGCTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCGCCAACAAGAGACGGCGGCAGCAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | CGCTTAGCATTGCTCGGACTGAAATCTCGAAGTTCTTaGAGCAAGGATGCTAGCGCCTCCAGCTCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RLALLGLKSRSS*SKDASASSSSE Trigger: CTCAGAAGAGCTGGAGGCGCTAGCATCCTTGCTCCAAGAACTTCGAGATTTCAGTCCGAGCAATGCTAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | CTCCACCTCTTCGATGATGCTGACCACATCGTCTGCTaGCAGGTGGAGTTTGGTGGACAGTTCAATGAGACT | + |
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Preference number: 6 (lower is better) Translates to: LHLFDDADHIVC*QVEFGGQFNET Trigger: AGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 90 bp | ACCTCTTCGATGATGCTGACCACATCGTCTGCTGGCAGGTGGAGTTaGGTGGACAGTTCAATGAGACTATCGATCGTCTGCGGATCCATC | + |
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Preference number: 6 (lower is better) Translates to: TSSMMLTTSSAGRWS*VDSSMRLSIVCGSI Trigger: GATGGATCCGCAGACGATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGAGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CAA 72 bp | ATGATGCTGACCACATCGTCTGCTGGCAGGTGGAGTTaGGTGGACAGTTCAATGAGACTATCGATCGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: MMLTTSSAGRWS*VDSSMRLSIVC Trigger: GCAGACGATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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| CDS CCA 72 bp | TCTTCGATGATGCTGACCACATCGTCTGCTGGCAGGTaGAGTTTGGTGGACAGTTCAATGAGACTATCGATC | + |
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Preference number: 6 (lower is better) Translates to: SSMMLTTSSAGR*SLVDSSMRLSI Trigger: GATCGATAGTCTCATTGAACTGTCCACCAAACTCCACCTGCCAGCAGACGATGTGGTCAGCATCATCGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041543.9 ENSMUST00000186451.2 ENSMUST00000190827.7 |
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