Pregenerated sensors for VEZF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018377Ensembl transcript IDs: ENSMUST00000018521.11, ENSMUST00000143052.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTCCACATGTaGCCGCTGCCCTCCCGGGTCTCCGCAGTGCCATTCCTAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RRAEHMPGNEGFLHM*PLPSRVSAVPFLGL Trigger: AAGGCCTAGGAATGGCACTGCGGAGACCCGGGAGGGCAGCGGTCACATGTGGAGGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 90 bp | GCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATaGAGACAGCTGCCTCCCTGGAAACTCCAGAAAGCGGATACAAGG | + |
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Preference number: 1 (lower is better) Translates to: AQSQRAHSLQGFHGA*RQLPPWKLQKADTR Trigger: CCTTGTATCCGCTTTCTGGAGTTTCCAGGGAGGCAGCTGTCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 90 bp | ACTGCCAGCACAACAGAGATGACAAGGCCCGACGAGCAGAGCACATaGCAGGAAATGAAGGTTTCCTCCACATGTGACCGCTGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TASTTEMTRPDEQST*QEMKVSSTCDRCPP Trigger: GGGAGGGCAGCGGTCACATGTGGAGGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTTGTGCTGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 90 bp | GGGAAAGCTCTCCACCAGGTTACAACCAGGAGGGAAACCATACTCTaGCTTTCTGTAGAACGGTGGCCGTTGGTGCATTCGACACACGGG | + |
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Preference number: 1 (lower is better) Translates to: GKALHQVTTRRETIL*LSVERWPLVHSTHG Trigger: CCCGTGTGTCGAATGCACCAACGGCCACCGTTCTACAGAAAGGCAGAGTATGGTTTCCCTCCTGGTTGTAACCTGGTGGAGAGCTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 90 bp | AGGCTGGATGTCAGATTTGAAGATTATCTAATACAACTGTTTAGCTaGCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RLDVRFEDYLIQLFS*QSDKGKLSTRLQPG Trigger: TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAGTTGTATTAGATAATCTTCAAATCTGACATCCAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR TCA 90 bp | TTACAACCTCTTGGTTTGAACAAACTGTTCTCTAACATGATGCTTTaGAAACATGAAGTGTGGCGTGATGGCATAGAGTCTCTGTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LQPLGLNKLFSNMML*KHEVWRDGIESLFP Trigger: GGGAAACAGAGACTCTATGCCATCACGCCACACTTCATGTTTTCAAAGCATCATGTTAGAGAACAGTTTGTTCAAACCAAGAGGTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATAGCGTGCACACTCACTaGAGGGCTTCCACGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHSVHTH*RASTEH Trigger: ATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCT...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATGCAGACTGAACAGGATCCCCTaGCCCGTTAGGAGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KAQSQRAHSLQGFHGACRLNRIP*PVRSLL Trigger: AAGCAGGCTCCTAACGGGTCAGGGGATCCTGTTCAG...TCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATGCAGAAGTTCTCACTCCTCCTaGACAGGATCCCCTGACCCG | + |
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Preference number: 2 (lower is better) Translates to: KAQSQRAHSLQGFHGACRSSHSS*TGSPDP Trigger: CGGGTCAGGGGATCCTGTTCAGGAGGAGTGAGAACT...TCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATGACGAGCAGAGCACATaGCAGGAAATGAAGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHDEQST*QEMKVS Trigger: GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTC...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATAACATCAACAGACGTTaGTTGGGAGAGAGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHNINRR*LGEREA Trigger: TGCCTCTCTCTCTCCCAATCAACGTCTGTTGATGTT...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATGGAAGTCATCTTCTGTaGCAGTCCTGCATGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHGSHLL*QSCMHS Trigger: AGAATGCATGCAGGACTGTCACAGAAGATGACTTCC...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR CAA 90 bp | ACCAGGAGGGAAACCATACTCTGCCTTTCTGTAGAACGGTGGCCGTaGGTGCATTCGACACACGGGCGAATCAGCTCAGCATCAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: TRRETILCLSVERWP*VHSTHGRISSASAS Trigger: TGATGCTGATGCTGAGCTGATTCGCCCGTGTGTCGAATGCACCAACGGCCACCGTTCTACAGAAAGGCAGAGTATGGTTTCCCTCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCAGCACAGTCTCAGCGTaGACACTCACTGCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSSTVSA*TLTAGL Trigger: AAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCT...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGACACACGGCCTATCTGTaGCCCCTCTGCCCTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGHTAYL*PLCPTL Trigger: GAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTG...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATTTCTCCTCAGTCAGCTaGAGCCTTTTCTCATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHFSSVS*SLFSSK Trigger: TTTTGATGAGAAAAGGCTGCAGCTGACTGAGGAGAA...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCAGACAGCTGCCTCCCTaGAAACTCCAGAAAGCGGAT | + |
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Preference number: 2 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSRQLPP*KLQKAD Trigger: ATCCGCTTTCTGGAGTTTCCAGGGAGGCAGCTGTCT...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAAGTTCTCACTCCTCCTaGACAGGATCCCCTGACCCG | + |
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Preference number: 2 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGSSHSS*TGSPDP Trigger: CGGGTCAGGGGATCCTGTTCAGGAGGAGTGAGAACT...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATTCTAACATGATGCTTTaGAAACATGAAGTGTGGCGT | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHSNMML*KHEVWR Trigger: ACGCCACACTTCATGTTTTCAAAGCATCATGTTAGA...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTGGCTTCCACGGAGCATaGAGACAGCTGCCTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TVGYKQTEVIFCDSPACIGFHGA*RQLPPW Trigger: CCAGGGAGGCAGCTGTCTGCATGCTCCGTGGAAGCC...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCACACTCTGCTTGTTCTaGAGGGGCATACTACCTAGT | + |
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Preference number: 2 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSTLCLF*RGILPS Trigger: ACTAGGTAGTATGCCCCTTCAGAACAAGCAGAGTGT...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATGCAGAAATCTGCACAATACTTaGTTAAACAGAAGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KAQSQRAHSLQGFHGACRNLHNT*LNRRRG Trigger: CCCCCTCCTTCTGTTTAATCAAGTATTGTGCAGATT...TCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATACCATTTTTCCACTGTaGAGAAGAACTGTTGTAACA | + |
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Preference number: 2 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHTIFPL*RRTVVT Trigger: TGTTACAACAGTTCTTCTCCACAGTGGAAAAATGGT...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCGGAAGTCATCTTCTGTaGCAGTCCTGCATGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: NRDDKARRAEHMPGNEGFGSHLL*QSCMHS Trigger: AGAATGCATGCAGGACTGTCACAGAAGATGACTTCC...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTAGCGTGCACACTCACTaGAGGGCTTCCACGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TVGYKQTEVIFCDSPACISVHTH*RASTEH Trigger: ATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCT...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTCAACAGACGTTGATTaGGAGAGAGAGAGGCATATC | + |
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Preference number: 2 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSSTDVD*ERERHI Trigger: GATATGCCTCTCTCTCTCCCAATCAACGTCTGTTGA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAAGACAGCTGCCTCCCTaGAAACTCCAGAAAGCGGAT | + |
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Preference number: 2 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGRQLPP*KLQKAD Trigger: ATCCGCTTTCTGGAGTTTCCAGGGAGGCAGCTGTCT...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAGACGAGCAGAGCACATaGCAGGAAATGAAGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGDEQST*QEMKVS Trigger: GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTC...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCTCAACAGACGTTGATTaGGAGAGAGAGAGGCATATC | + |
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Preference number: 2 (lower is better) Translates to: NRDDKARRAEHMPGNEGFSTDVD*ERERHI Trigger: GATATGCCTCTCTCTCTCCCAATCAACGTCTGTTGA...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTTTGTACTGACACAGTaGGGTATAAACAAACGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSFVLTQ*GINKRK Trigger: CTTCCGTTTGTTTATACCCCACTGTGTCAGTACAAA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTAACATCAACAGACGTTaGTTGGGAGAGAGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TVGYKQTEVIFCDSPACININRR*LGEREA Trigger: TGCCTCTCTCTCTCCCAATCAACGTCTGTTGATGTT...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGATTCTCCTCAGTCAGCTaGAGCCTTTTCTCATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGFSSVS*SLFSSK Trigger: TTTTGATGAGAAAAGGCTGCAGCTGACTGAGGAGAA...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCTCTGCCTCAGACGTATaGTATTTTGATGTTTGTACT | + |
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Preference number: 2 (lower is better) Translates to: NRDDKARRAEHMPGNEGFSASDV*YFDVCT Trigger: AGTACAAACATCAAAATACCATACGTCTGAGGCAGA...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTAATCTGCACAATACTTaGTTAAACAGAAGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TVGYKQTEVIFCDSPACINLHNT*LNRRRG Trigger: CCCCCTCCTTCTGTTTAATCAAGTATTGTGCAGATT...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTACAATTACAACCTCTTaGTTTGAACAAACTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TVGYKQTEVIFCDSPACITITTS*FEQTVL Trigger: GAGAACAGTTTGTTCAAACCAAGAGGTTGTAATTGT...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | CAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATaGAGACAGCTGCCTCCCTGGAAACTCCAGAAAGCG | + |
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Preference number: 3 (lower is better) Translates to: QRAHSLQGFHGA*RQLPPWKLQKA Trigger: CGCTTTCTGGAGTTTCCAGGGAGGCAGCTGTCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTaGCCTACCCTCACCCATCCTGCCTCAACTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: GGFHHTAYLCPL*PTLTHPASTLS Trigger: GGAGAGAGTTGAGGCAGGATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR TCA 72 bp | GAGCACATGCCAGGAAATGAAGGTTTCCTCCACATGTaGCCGCTGCCCTCCCGGGTCTCCGCAGTGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: EHMPGNEGFLHM*PLPSRVSAVPF Trigger: GAATGGCACTGCGGAGACCCGGGAGGGCAGCGGTCACATGTGGAGGAAACCTTCATTTCCTGGCATGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | CTGGGGGAAGGACCCACACCTGCCCACTTTGAGGACTaGTCCTTGGCCACTGTAGAGGAAGCCTGGGTTATC | + |
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Preference number: 3 (lower is better) Translates to: LGEGPTPAHFED*SLATVEEAWVI Trigger: GATAACCCAGGCTTCCTCTACAGTGGCCAAGGAGCAGTCCTCAAAGTGGGCAGGTGTGGGTCCTTCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | ACAACAGAGATGACAAGGCCCGACGAGCAGAGCACATaGCAGGAAATGAAGGTTTCCTCCACATGTGACCGC | + |
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Preference number: 3 (lower is better) Translates to: TTEMTRPDEQST*QEMKVSSTCDR Trigger: GCGGTCACATGTGGAGGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | AGGAAGCCTGGGTTATCTGACCATAAGGACCATGACTaGCAGCACAACAGAGATGACAAGGCCCGACGAGCA | + |
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Preference number: 3 (lower is better) Translates to: RKPGLSDHKDHD*QHNRDDKARRA Trigger: TGCTCGTCGGGCCTTGTCATCTCTGTTGTGCTGGCAGTCATGGTCCTTATGGTCAGATAACCCAGGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR GCA 72 bp | CTCCACCAGGTTACAACCAGGAGGGAAACCATACTCTaGCTTTCTGTAGAACGGTGGCCGTTGGTGCATTCG | + |
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Preference number: 3 (lower is better) Translates to: LHQVTTRRETIL*LSVERWPLVHS Trigger: CGAATGCACCAACGGCCACCGTTCTACAGAAAGGCAGAGTATGGTTTCCCTCCTGGTTGTAACCTGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATGCAGAAAATCTGCACAATACTaGATTAAACAGAAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KAQSQRAHSLQGFHGACRKSAQY*IKQKEG Trigger: CCCCTCCTTCTGTTTAATCAAGTATTGTGCAGATTT...TCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCCACATATACCCTACTTaGAACAACCCCAGCAAAATT | + |
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Preference number: 3 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSHIYPT*NNPSKI Trigger: AATTTTGCTGGGGTTGTTCAAAGTAGGGTATATGTG...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
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| 3UTR TCA 72 bp | TTTCTTTCTGTAAGAACTAATACTTTCAGGATCTCATaGCCACGCTGTAGCCTGGGGGAAGGACCCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: FLSVRTNTFRIS*PRCSLGEGPTP Trigger: AGGTGTGGGTCCTTCCCCCAGGCTACAGCGTGGTCATGAGATCCTGAAAGTATTAGTTCTTACAGAAAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGACACATATACCCTACTTaGAACAACCCCAGCAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGHIYPT*NNPSKI Trigger: AATTTTGCTGGGGTTGTTCAAAGTAGGGTATATGTG...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAAAATCTGCACAATACTaGATTAAACAGAAGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGKSAQY*IKQKEG Trigger: CCCCTCCTTCTGTTTAATCAAGTATTGTGCAGATTT...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| 3UTR TCA 72 bp | CTTGGTTTGAACAAACTGTTCTCTAACATGATGCTTTaGAAACATGAAGTGTGGCGTGATGGCATAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLNKLFSNMML*KHEVWRDGIES Trigger: AGACTCTATGCCATCACGCCACACTTCATGTTTTCAAAGCATCATGTTAGAGAACAGTTTGTTCAAACCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATGCTGCTGCTTCTGATTaGTGGTCTCCTCACTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHAAASD*WSPHSC Trigger: GCATGAGTGAGGAGACCAGCAATCAGAAGCAGCAGC...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGTCTCAGCGTGCACACTCACTGCAGGGCTTCCACGGAGCATGCAGATGCTGCTGCTGCTTCTaGTTGCTGGTCTCCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQSQRAHSLQGFHGACRCCCCF*LLVSSL Trigger: GAGTGAGGAGACCAGCAATCAGAAGCAGCAGCAGCA...TCTGCATGCTCCGTGGAAGCCCTGCAGTGAGTGTGCACGCTGAGACTGTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATCAGTGCACGTCTGCATaGGGGAGGAAAATTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHQCTSA*GRKIGI Trigger: AATGCCAATTTTCCTCCCTCATGCAGACGTGCACTG...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCGATGCTTCGTGGGCCTaGAACAGGAACGCGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSDASWA*NRNAVQ Trigger: CTGGACCGCGTTCCTGTTCCAGGCCCACGAAGCATC...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR TCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTGCTGCTGCTGCTTCTaGTTGCTGGTCTCCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSCCCCF*LLVSSL Trigger: GAGTGAGGAGACCAGCAATCAGAAGCAGCAGCAGCA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR GCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTGTTGGTGATGGGATaGTTCGTGGGCCTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NRDDKARRAEHMPGNEGFLLVMG*FVGLEQ Trigger: CTGTTCCAGGCCCACGAAGCATCCCATCACCAACAG...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCGCTGCTTCTGATTGCTaGTCTCCTCACTCATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSAASDC*SPHSCT Trigger: CGTGCATGAGTGAGGAGACCAGCAATCAGAAGCAGC...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR GCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCGCAGCAGTGCACGTCTaGATGAGGGAGGAAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRDDKARRAEHMPGNEGFAAVHV*MREENW Trigger: CCAATTTTCCTCCCTCATGCAGACGTGCACTGCTGC...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143052.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTCATGCACGTTTTGCTaGTGCCTTGTTTGCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSSCTFC*CLVCTC Trigger: ACACGTGCAAACAAGGCATCAGCAAAACGTGCATGA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTTAAAGGTGAGGTCATaGCTAAGGGGCTGGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSLKVRS*LRGWLW Trigger: CCATAACCAGCCCCTTAGCCATGACCTCACCTTTAA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCTTAAAGGTGAGGTCATaGCTAAGGGGCTGGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: NRDDKARRAEHMPGNEGFLKVRS*LRGWLW Trigger: CCATAACCAGCCCCTTAGCCATGACCTCACCTTTAA...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTGCTTACTGGGTTTCTTaGCAGACTGGGGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACIAYWVS*QTGAQA Trigger: TGCCTGTGCCCCAGTCTGTCAAGAAACCCAGTAAGC...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTGCTGCTGCTTCTGATTaGTGGTCTCCTCACTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACIAAASD*WSPHSC Trigger: GCATGAGTGAGGAGACCAGCAATCAGAAGCAGCAGC...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAGCAGCAGTGCACGTTTaGCATTTGAAGGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGAAVHV*HLKGLS Trigger: AGAAAGACCCTTCAAATGCCAAACGTGCACTGCTGC...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTTCATGCACGTTTTGCTaGTGCCTTGTTTGCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACISCTFC*CLVCTC Trigger: ACACGTGCAAACAAGGCATCAGCAAAACGTGCATGA...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTGCCTCATTGCTATATTaGGAGGGGCAGCTAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACIASLLY*EGQLMS Trigger: TGACATTAGCTGCCCCTCTCAATATAGCAATGAGGC...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGACCATGTGTCTTTAAGTaGCTGGTGATATATGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGPCVFK*LVIYAA Trigger: TGCAGCATATATCACCAGCCACTTAAAGACACATGG...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTCCATGTGTCTTTAAGTaGCTGGTGATATATGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACIPCVFK*LVIYAA Trigger: TGCAGCATATATCACCAGCCACTTAAAGACACATGG...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTATGAGGGAGGAAAATTaGCATTTGAAGGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGYKQTEVIFCDSPACIMREEN*HLKGLS Trigger: AGAAAGACCCTTCAAATGCCAATTTTCCTCCCTCAT...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143052.2 |
||
| 3UTR CAA 72 bp | TGCAGTATTTTGCATGTTAGTAATACAGTGCTGGTATaGACAGGTAAATCATCATCCGCGTACATAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CSILHVSNTVLV*TGKSSSAYIET Trigger: GGTTTCTATGTACGCGGATGATGATTTACCTGTCAATACCAGCACTGTATTACTAACATGCAAAATACTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATGGCAGCAGTGCACGTTaGGCATTTGAAGGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHGSSAR*AFEGSF Trigger: GAAAGACCCTTCAAATGCCAAACGTGCACTGCTGCC...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR CAA 90 bp | GGAGGATTTCACCACACGGCCTATCTGTGCCCCCTCTGCCCTACCCTCACCCATTCACTCATGCACGTTTaGCTGATGCCTTGTTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGFHHTAYLCPLCPTLTHSLMHV*LMPCLH Trigger: GTGCAAACAAGGCATCAGCAAAACGTGCATGAGTGA...ATGGGTGAGGGTAGGGCAGAGGGGGCACAGATAGGCCGTGTGGTGAAATCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS TCA 90 bp | TGTTGTTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTTCTaGTTGCTGGTCTCCTCACTCATGCACGTTTTGCTGATGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCF*LLVSSLMHVLLMPC Trigger: ACAAGGCATCAGCAAAACGTGCATGAGTGAGGAGACCAGCAATCAGAAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTTAGGTGGTCAGGCCTaGAGAAGCCTTTCCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSLGGQA*RSLSHK Trigger: TTTGTGGGAAAGGCTTCTCAAGGCCTGACCACCTAA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCGCTTGTCACATGTTGTaGTTGTTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSACHML*LLLLLL Trigger: CAGCAGCAGCAGCAACAACAACAACATGTGACAAGC...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCTCACTCATGCACGTTTaGCTGATGCCTTGTTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSSLMHV*LMPCLH Trigger: GTGCAAACAAGGCATCAGCAAAACGTGCATGAGTGA...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | AACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCCAGCTTGTCACATGTaGTTGTTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NRDDKARRAEHMPGNEGFPACHM*LLLLLL Trigger: CAGCAGCAGCAACAACAACAACATGTGACAAGCTGG...GAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTGGCTTACTGGGTTTCTaGACAGACTGGGGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVGYKQTEVIFCDSPACIGLLGF*TDWGTG Trigger: GCCTGTGCCCCAGTCTGTCAAGAAACCCAGTAAGCC...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGACAGGCGTGGTTCTTCTaGACAGGCTTACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGQAWFF*TGLLGF Trigger: GAAACCCAGTAAGCCTGTCAAGAAGAACCACGCCTG...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018521.11 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGACAAGGCCCGACGAGCAGAGCACATGCCAGGAAATGAAGGTTTCCCATGAGGGAGGAAAATaGGCATTTGAAGGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEMTRPDEQSTCQEMKVSHEGGK*AFEGSF Trigger: GAAAGACCCTTCAAATGCCAATTTTCCTCCCTCATG...GGAAACCTTCATTTCCTGGCATGTGCTCTGCTCGTCGGGCCTTGTCATCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGACCAGCTTGTCACATGTaGTTGTTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGPACHM*LLLLLL Trigger: CAGCAGCAGCAACAACAACAACATGTGACAAGCTGG...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAGCTTCCCTGGCCAGCTaGTCACATGTTGTTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGASLAS*SHVVVV Trigger: AACAACAACAACATGTGACAAGCTGGCCAGGGAAGC...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAGCTGCCAATCTGATAAGGGAAAGCTCTCCACCAGGTTACAACCAGGAGGCCTCATTGCTATATaGAGAGGGGCAGCTAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFSCQSDKGKLSTRLQPGGLIAI*RGAANV Trigger: GACATTAGCTGCCCCTCTCAATATAGCAATGAGGCC...TCCTGGTTGTAACCTGGTGGAGAGCTTTCCCTTATCAGATTGGCAGCTAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGGGTATAAACAAACGGAAGTCATCTTCTGTGACAGTCCTGCATGCATTTTAGGTGGTCAGGCCTaGAGAAGCCTTTCCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVGYKQTEVIFCDSPACILGGQA*RSLSHK Trigger: TTTGTGGGAAAGGCTTCTCAAGGCCTGACCACCTAA...AATGCATGCAGGACTGTCACAGAAGATGACTTCCGTTTGTTTATACCCCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||
| CDS GCA 72 bp | TTCCCTGGCCAGCTTGTCACATGTTGTTGTTGTTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FPGQLVTCCCCC*CCCCCCCCCCF Trigger: GAAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAACAACAACATGTGACAAGCTGGCCAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018521.11 ENSMUST00000143052.2 |
||